TCONS_00008644 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008644
Unique NameTCONS_00008644
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2947

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008644 ID=TCONS_00008644|Name=TCONS_00008644|organism=Clytia hemisphaerica|type=transcript|length=2947bp
CTGAAAGAATCTGCACGGAAGTTTTATCCGCTTTTTTGCTGAACTGTTTC
AAAGAACTTACCGATTTCTACACATTCATCAATCAATAATGGCTGCTATG
TTACGAGCACTTACAAAACCATTGAATATGGCTGCTGGCGTTGGTGCCGC
CGCATTGGGTTTGGCCGCCGGTGCTATTGGATTCCCTGAAGCTGCTAATG
ATTGCAAGTCTCAGGTGAAAAAAGCCTACAGACAATTCATGCCGTGTATG
GATTATCCTGATTTATCCAAACATAATAACTGCTTGAGTAAAGTGTTGAC
ACCGCAAATGTATACGAAGCTTCGTGATTTGCAAACACCATCAGGTTATA
CACTTGATATGGCAATCCAAACAGGCGTCGACAATCCCGGACATCCGTTC
ATTTCAACGGTCGGTGTTGTTGCCGGTGATGAAGAATCTTATGAAGTCTT
CAAAGAATTGATGGACCCCATCATCCGAGACAGACATAATGGTTTCGGAC
CAAATGATCGCCATAAGACTGATCTTGACGCCTCCAAAATTAAAGGTGGC
AAATTTGATGAGAAATATGTCTTGAGTTCACGCGTGCGAACAGGGCGTTC
CATCAAGGGACATTCTTTACCACCACACTGTACTCGTGCTGAACGTCGCA
GTGTTGAACACATTGTTACATCCGCCTTGAACTCGTTACAAGGTGATCTG
TCTGGTACTTATTATCCGTTATCTGGAATGACCGACGATGAACAGCAACA
ATTGATCGATGATCATTTCTTGTTTGATAAACCAGTTTCTCCATTGTTGA
CCTGTGCTGGAATGGCACGTGACTGGCCTGATGCACGTGGTATCTGgcat
aacaaaaacaaaaatttccttATCTGGATCAACGAGGAAGATCACACTCG
TGTCATCTCTATGGAGAAGGGTGGAGATATGAAGAAAGTCTTTGAACGAT
TCTGCCGTGGATTGAAAGAAGTTGAGAAACATATTGAGGAGCATGGTCAT
GGATTTATGTGGTCTGAACGTCTTGGATATATCTTGACTTGTCCATCCAA
CCTTGGAACTGGCCTAAGAGCTGGTGTTCACGTGAAATTACCAAAGCTGT
CTCAAGACAAACGTTTCGATAACATTCTTCATGCATATCGTTTACAAAAA
CGTGGAACAGGAGGTGTCGACACTGCTGCTGTTGGTGGTACCTTTGACAT
TTCAAACTTGGATCGTCTTGGACATTCTGAAGTTGAACTGGTTCAACAAG
TCATCAATGGTGTCAACAATTTGATTGACATGGAAAAATCCTTAGAAAAG
GGTAAGAAGATTGACAGCCTATTGCCCAAAAACATGTCACAATAGNCCAT
GGAAAAATCCTTAGAGAAGGGTAAGAAGATTGACAGCCTCTTACCCAAAG
CAGAAATATGAAGTCTCAATAGAGACTTCGATCACTCCCTTCCCCCCTtg
tataaaaaaacattaaaaaattcaaaaaaaaatttaaatgaagGAAACTa
tcgaaaaaattcaaaactttgtaaagctaaaaaaagatattattattatt
attttcattatttttcatacCTTTCTTTTGTTAAGTTTCTTTTGCTTTTA
AACCCCGGGTATTCTTCCTAGAAGGTTTATCATCTGTAATCGAatctaaa
ttcaaattttaaggAAATCAAACACCAACCAAAACGGTAATGTCAAAATT
GATCAACtaaattttttctctcatttaaaaacaccattttttattcatat
tttgtttttataaaaatccgAATTTTTCTAACGAACTTTAAAATGGTAAA
TGTACTTTGTAAGAATGAATCTAAAGCCTAAGGACTACAAGTCTTGATGA
AATGAGAAAATGGGCTGCTTGTGAGGGCGTTTGAAGTCCAAAGTTTCAAA
TTTAAAGAATTATATCCAAAGGGtgcttatttttgattttttagtaaata
tttttgaattactTGTTGAGAGTTCTGAAGGGAATTGCTCCAAGTTAACC
AGAATTAAgatctaaattttcaaaaatgctaAAGCCgacagtattttttt
tttaagaattcagAAACAATATCAAACCACTGTAGAAATTAatgctttta
ttttcatttccatATCGCTCAATCCaaggtaaaaataaaaaaataagtga
ttatttttggtttttgttgtTGAGCGTTCTTAGGGCGGAATCGTTCCAAC
TTGATTAAAATTAtcatttaaaagtttgaaatcaaaatttatttcctctt
atttttaaaagtgataaaatttcaaatcatcaGCAACTATtctagaaaaa
attcttttaaaatcttttttaaaaagtatacCACACATTTTAATcgattc
caaaaaaatattcttgaactttgaTATGAGTGCGTTATTTCAAAGCGTAA
ATAAAGTGTTAGAAACACCACACAATATATTGGCATAAAGTGCTAGATAC
ACCACAAAATATATTCTATAGCTTGAGGGACTAGTCTTGTTGAGATGTAA
AAAGGGCTGCTTGAGGGTGTCCTCAGTCCATAGAAGTTTCCGAAACAGAA
ATGTACAAAAGCTACGATTTATATCGAAAGggtgttttttgattttttag
tgattattttgaaatacttgttttttgaatttttagtgattattttgaaa
tacttGTTGAACATTCTGAGGGCGGATTGATCCAAGTTAACCAGGATTAA
gatctaaattttcaaaaagcgaAATTATTAAGCGAACAAACCCACGAGAG
CATTTATTTTTAATATATACGTAAAGAATCGACAgtgtttttcgtttttt
tttctattgttcgaTGATTTTAAGCCATCAACTAAAACCTTCTAGAAAGT
TTACCCAAAACTCCACGTGTAAAATATCCCTGTTCTTACATTTCTTTcgt
tttgttcttttatttgtaaataatctttttttattattatatattta
Run BLAST on NCBI

protein sequence of TCONS_00008644-protein

>TCONS_00008644-protein ID=TCONS_00008644-protein|Name=TCONS_00008644-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
MAAMLRALTKPLNMAAGVGAAALGLAAGAIGFPEAANDCKSQVKKAYRQF
MPCMDYPDLSKHNNCLSKVLTPQMYTKLRDLQTPSGYTLDMAIQTGVDNP
GHPFISTVGVVAGDEESYEVFKELMDPIIRDRHNGFGPNDRHKTDLDASK
IKGGKFDEKYVLSSRVRTGRSIKGHSLPPHCTRAERRSVEHIVTSALNSL
QGDLSGTYYPLSGMTDDEQQQLIDDHFLFDKPVSPLLTCAGMARDWPDAR
GIWHNKNKNFLIWINEEDHTRVISMEKGGDMKKVFERFCRGLKEVEKHIE
EHGHGFMWSERLGYILTCPSNLGTGLRAGVHVKLPKLSQDKRFDNILHAY
RLQKRGTGGVDTAAVGGTFDISNLDRLGHSEVELVQQVINGVNNLIDMEK
SLEKGKKIDSLLPKNMSQ
Run BLAST on NCBI

transcript from alignment at sc0000086:960850..966793-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008644 ID=TCONS_00008644|Name=TCONS_00008644|organism=Clytia hemisphaerica|type=transcript|length=5944bp|location=Sequence derived from alignment at sc0000086:960850..966793- (Clytia hemisphaerica)
CTGAAAGAATCTGCACGGAAGTTTTATCCGCTTTTTTGCTGAACTGTTTC
AAAGAACTTACCGATTTCTGTAAGTATTGTTCGTTCAATATTTTTATATT
GTATTACTTCTATCTTCGGCTTTGAAATTTATTGAACCATTTCCGGCTTT
ACCATCTAGTTGAAATCTTCTACTGACCAATTTTCGACTCTTCTGACCAA
CTTTCGCCGACTTTAACCAATTTATGACCCTTTTGACCAACTTTCGCCAA
CTTTTGCCTCTTTCTGACGAACTTTCACCAACTTTTGACTCTTTCTGACC
AACTTTCGCCAACTTCCAACTTTCGCCAACTTCCAACTTTCGCCAACTTT
CAACTCTCTTTTGACCAACTTTCACCAACTTTTGACTCTTTCTGACCAAT
TTTAGCCAACTTTCACCAATTTTTTTACACTTTTGACCAACTTTCGCCAA
CTTTTGCTTCTTTCTGGTCAACTTTCACCAACTTTTGACTCTTTCTGACC
AACTTTCGCCAACTAATACTTCTTTCTGACCAACTTTTACCAACTTTTGA
CTCCTTTGACTAACCTTCACCAATTTTTGACTCTTTCTAACCAACTTTTG
CCAATTTGTTTACCCTTTTAACCAACTTTCACTAACTTTCACCAACTTTT
GACTCTTTTTGACCATTTTTCGCCAACTTTCGATTCTTTGAACCAACATT
TACCAACTTTCGACTCTTTTGACCAACTTTCACCAATTTTCGCCAACTTT
CGACTCTTTTTAGCCAACTTTCACCAATTTCTGACACTTTCGACAAACTT
TCAACTCTCTTTTGACCAACTTTCACCAACTTTTGACTCTTTCTGACCAA
CCTTCGCCAATTTTTGACTCTTTCTGACCAATTTTAGCCAACTTTCACCA
TTTTTTTTACACTTTTGACCAACTTTCGCCAGCTTTTGCTTCTTTCTGGT
CAACTTTCACCAACTTTCGATTCTTTGAACCAACATTCACCAACTTTCGA
CTCTTTTGACCAAGTTTCACCAATTTTCGACTCTTTCTGACCAATTTTCG
CCAACTTTCGACTCTTTCTAACCAACTTTTGCCAATTTGTTTACCCTTTT
AACAAACTTTCGCCAACTTTTGACTCTATCTGACCAATTTTCGCCAACTT
TCGACTCTTTTGACCAACTTTCACCTATTTTCGACTCTTTCTGACCAACT
TTCAGCAACTTTTGACTCTTTCTGACTAATTTTTGACTCTATCTGACCAA
TTTTCGCCAACTTTCGATTCTTTGGACCAACTTTCACCATCGACTCTTTT
GACCAACTTTCACCAATTTTCGAACTCTTTCTGACCAATTTTCGCCAACT
TTCGACTCTTTTTAGCCAACTTTCACCAATTTCTGACTCTTTCGACAAAC
TTTCGCCAACTTTTGACTCTATCTGACCAATTTTCGCCAACTTTCGACTC
TTTTGACCAACTTTCACCAATTTTCGACTCTTTCTGACAAACTTTCAGCA
ACTTTTGACTCTTTCTGACCAATTTTTGACTCTATCTGACTAATTTTCGC
CAACGTTCGACTCTTTTGGCCAACTTTCACCAATTTTCGACTCTTTCTGA
CCAACTTTTGACTCTTTCTGACCAATTTTTGACTCTATCTGACTAATTTT
CGCCAACGTTCGACTCTTTTGGCCAACTTTCACCAATTTTCGCCAACTTG
CGACTCTTTTGACCAATTTTCACCAATTTTCGACTCTTTCTGACCAACTT
TTGACTCTTTCTGACCACCTTTTGACTCTATCTGACCAATTTTCGCCAAC
TTTCGACTCTTTTGGCCAACTTTCACCAATTTTCGCCAACTTGCGACTCT
TTTGACCAATTTTCGGCAATTTTCGACTCTTTCTGACCAACTTTTGACTC
TTTCTGACCACCTTTTGACTCTATCTGACCAATTTTCGCCAACTTTCGAC
TCTTTTGGCCAACTTTCACTAATTTCTGACTCTTTCGACAAACTTTCGCC
AGCTTTTGACTCTATCTGACCAACTTTCACCACATTCCTCTTTCTGACCA
ACTTTCGACAAACTTTGACTTTACTTTTGACCTTATTCGTCACCCGATTA
ACTCTCGCTTGAACTCGCACACCAAAGCCAACTTTCATTTTTTAATATCA
TAGACACATTCATCAATCAATAATGGCTGCTATGTTACGAGCACTTACAA
AACCATTGAATATGGCTGCTGGCGTTGGTGCCGCCGCATTGGGTTTGGCC
GCCGGTGCTATTGGATTCCCTGAAGCTGCTAATGATTGCAAGTCTCAGGT
GAAAAAAGCCTACAGACAATTCATGCCGTGTATGGATTATCCTGATTTAT
CCAAACATAATAACTGCTTGAGTAAAGTGTTGACACCGCAAATGTATACG
AAGCTTCGTGATTTGGTAAGCTTATACTGAATGTTTTTTTTCTTATAGTA
AGTATGACCACGGGCTGATATCAACTGAGAATGCGCATACACTTATAAGT
CTATCGTTCTATAAAACTCAACAGATATATTTTCGTAATCCTCGCCCTGG
TTATTCTCAGTAGCAGTGTGCGAGGTCACATTTTAATCTTTAACTATTTT
CTAGGAAATCTATACAGCACTGGTTGTTTCTCTAGATTTATAGCTGTTTT
ATAGTTGAACACGTTCTGTATTCTAGGAAAAACTTTCTGCCTTCATATAC
TAACAATACTTAGATATTTGGATACTTTCTATGAAAGGTGTGTTCTGAAA
ACTTATTTTAATCTTTAGCAAACACCATCAGGTTATACACTTGATATGGC
AATCCAAACAGGCGTCGACAATCCCGGACATCCGTTCATTTCAACGGTCG
GTGTTGTTGCCGGTGATGAAGAATCTTATGAAGTCTTCAAAGAATTGATG
GACCCCATCATCCGAGACAGACATAATGGTTTCGGACCAAATGATCGCCA
TAAGACTGATCTTGACGCCTCCAAAATTAAAGGTTCTTATATAAGATTTC
TCAAAAAATTTTTTTATAATCGTCAACTTAGAATAATTACACGAATTGGA
TTGACCGAGAAGGGTTTTGAAGAATACAATATTAAACGTTAATTGTACTC
TCCGATATCGTACTCCTACGGACTCGGACAAACTAAAATTACTAGTACTA
AATTGTTGTTGATTCTTTAAGAGCTAAAAATTTGAATCATTCAGCTGGGT
AACCAAGCATAGAACTAAATTGCTGCTAAATCTTGTTGATTATAGAATTT
ATGATTAACTAACCTAACCTAAAGCAGTCCGAAAATTGGTTGCTAGAAGC
ATCATTAGCCCTAGGTGTATAGTAACTGGACTAAAAACCAAATGTAACAT
AGAAATTGAGTTAACTTTCTTTATTAACTGTTTAAAGGTGGCAAATTTGA
TGAGAAATATGTCTTGAGTTCACGCGTGCGAACAGGGCGTTCCATCAAGG
GACATTCTTTACCACCACACTGTACTCGTGCTGAACGTCGCAGTGTTGAA
CACATTGTTACATCCGCCTTGAACTCGTTACAAGGTGATCTGTCTGGTAC
TTATTATCCGTTATCTGGAATGACCGACGATGAACAGCAACAATTGATCG
ATGATCATTTCTTGTTTGATAAACCAGTTTCTCCATTGTTGACCTGTGCT
GGAATGGCACGTGACTGGCCTGATGCACGTGGTATCTGGCATAACAAAAA
CAAAAATTTCCTTATCTGGATCAACGAGGAAGATCACACTCGTGTCATCT
CTATGGAGAAGGGTGGAGATATGAAGAAAGTCTTTGAACGATTCTGCCGT
GGATTGAAAGAAGTTGAGAAACATATTGAGGAGCATGGTCATGGATTTAT
GTGGTCTGAACGTCTTGGATATATCTTGACTTGTCCATCCAACCTTGGAA
CTGGCCTAAGAGCTGGTAAGTATGGCCAAATCTTCATCTACTCCATAAAT
AATATTTGATTTTGACCTCCTTCACAAAACCAAGTAATCCTTTTCTGTCA
ATAATTCTTTCGCTTTTTTGAAACACCCAAGAAAGTAAAGATAACTAAAA
ACATTTATTTGGTCCTTCAGGTGTTCACGTGAAATTACCAAAGCTGTCTC
AAGACAAACGTTTCGATAACATTCTTCATGCATATCGTTTACAAAAACGT
GGAACAGGAGGTGTCGACACTGCTGCTGTTGGTGGTACCTTTGACATTTC
AAACTTGGATCGTCTTGGACATTCTGAAGTTGAACTGGTTCAACAAGTCA
TCAATGGTGTCAACAATTTGATTGACATGGAAAAATCCTTAGAAAAGGGT
AAGAAGATTGACAGCCTATTGCCCAAAAACATGTCACAATAGNCCATGGA
AAAATCCTTAGAGAAGGGTAAGAAGATTGACAGCCTCTTACCCAAAGCAG
AAATATGAAGTCTCAATAGAGACTTCGATCACTCCCTTCCCCCCTTGTAT
AAAAAAACATTAAAAAATTCAAAAAAAAATTTAAATGAAGGAAACTATCG
AAAAAATTCAAAACTTTGTAAAGCTAAAAAAAGATATTATTATTATTATT
TTCATTATTTTTCATACCTTTCTTTTGTTAAGTTTCTTTTGCTTTTAAAC
CCCGGGTATTCTTCCTAGAAGGTTTATCATCTGTAATCGAATCTAAATTC
AAATTTTAAGGAAATCAAACACCAACCAAAACGGTAATGTCAAAATTGAT
CAACTAAATTTTTTCTCTCATTTAAAAACACCATTTTTTATTCATATTTT
GTTTTTATAAAAATCCGAATTTTTCTAACGAACTTTAAAATGGTAAATGT
ACTTTGTAAGAATGAATCTAAAGCCTAAGGACTACAAGTCTTGATGAAAT
GAGAAAATGGGCTGCTTGTGAGGGCGTTTGAAGTCCAAAGTTTCAAATTT
AAAGAATTATATCCAAAGGGTGCTTATTTTTGATTTTTTAGTAAATATTT
TTGAATTACTTGTTGAGAGTTCTGAAGGGAATTGCTCCAAGTTAACCAGA
ATTAAGATCTAAATTTTCAAAAATGCTAAAGCCGACAGTATTTTTTTTTT
AAGAATTCAGAAACAATATCAAACCACTGTAGAAATTAATGCTTTTATTT
TCATTTCCATATCGCTCAATCCAAGGTAAAAATAAAAAAATAAGTGATTA
TTTTTGGTTTTTGTTGTTGAGCGTTCTTAGGGCGGAATCGTTCCAACTTG
ATTAAAATTATCATTTAAAAGTTTGAAATCAAAATTTATTTCCTCTTATT
TTTAAAAGTGATAAAATTTCAAATCATCAGCAACTATTCTAGAAAAAATT
CTTTTAAAATCTTTTTTAAAAAGTATACCACACATTTTAATCGATTCCAA
AAAAATATTCTTGAACTTTGATATGAGTGCGTTATTTCAAAGCGTAAATA
AAGTGTTAGAAACACCACACAATATATTGGCATAAAGTGCTAGATACACC
ACAAAATATATTCTATAGCTTGAGGGACTAGTCTTGTTGAGATGTAAAAA
GGGCTGCTTGAGGGTGTCCTCAGTCCATAGAAGTTTCCGAAACAGAAATG
TACAAAAGCTACGATTTATATCGAAAGGGTGTTTTTTGATTTTTTAGTGA
TTATTTTGAAATACTTGTTTTTTGAATTTTTAGTGATTATTTTGAAATAC
TTGTTGAACATTCTGAGGGCGGATTGATCCAAGTTAACCAGGATTAAGAT
CTAAATTTTCAAAAAGCGAAATTATTAAGCGAACAAACCCACGAGAGCAT
TTATTTTTAATATATACGTAAAGAATCGACAGTGTTTTTCGTTTTTTTTT
CTATTGTTCGATGATTTTAAGCCATCAACTAAAACCTTCTAGAAAGTTTA
CCCAAAACTCCACGTGTAAAATATCCCTGTTCTTACATTTCTTTCGTTTT
GTTCTTTTATTTGTAAATAATCTTTTTTTATTATTATATATTTA

Coding sequence (CDS) from alignment at sc0000086:960850..966793-

>TCONS_00008644 ID=TCONS_00008644|Name=TCONS_00008644|organism=Clytia hemisphaerica|type=CDS|length=5028bp|location=Sequence derived from alignment at sc0000086:960850..966793- (Clytia hemisphaerica)
GTGTTCACGTGAAATTACCAAAGCTGTCTCAAGACAAACGTTTCGATAAC
ATTCTTCATGCATATCGTTTACAAAAACGTGGAACAGGAGGTGTCGACAC
TGCTGCTGTTGGTGGTACCTTTGACATTTCAAACTTGGATCGTCTTGGAC
ATTCTGAAGTTGAACTGGTTCAACAAGTCATCAATGGTGTCAACAATTTG
ATTGACATGGAAAAATCCTTAGAAAAGGGTAAGAAGATTGACAGCCTATT
GCCCAAAAACATGTCACAATAGGTGGCAAATTTGATGAGAAATATGTCTT
GAGTTCACGCGTGCGAACAGGGCGTTCCATCAAGGGACATTCTTTACCAC
CACACTGTACTCGTGCTGAACGTCGCAGTGTTGAACACATTGTTACATCC
GCCTTGAACTCGTTACAAGGTGATCTGTCTGGTACTTATTATCCGTTATC
TGGAATGACCGACGATGAACAGCAACAATTGATCGATGATCATTTCTTGT
TTGATAAACCAGTTTCTCCATTGTTGACCTGTGCTGGAATGGCACGTGAC
TGGCCTGATGCACGTGGTATCTGGCATAACAAAAACAAAAATTTCCTTAT
CTGGATCAACGAGGAAGATCACACTCGTGTCATCTCTATGGAGAAGGGTG
GAGATATGAAGAAAGTCTTTGAACGATTCTGCCGTGGATTGAAAGAAGTT
GAGAAACATATTGAGGAGCATGGTCATGGATTTATGTGGTCTGAACGTCT
TGGATATATCTTGACTTGTCCATCCAACCTTGGAACTGGCCTAAGAGCTG
CAAACACCATCAGGTTATACACTTGATATGGCAATCCAAACAGGCGTCGA
CAATCCCGGACATCCGTTCATTTCAACGGTCGGTGTTGTTGCCGGTGATG
AAGAATCTTATGAAGTCTTCAAAGAATTGATGGACCCCATCATCCGAGAC
AGACATAATGGTTTCGGACCAAATGATCGCCATAAGACTGATCTTGACGC
CTCCAAAATTAAAGATGGCTGCTATGTTACGAGCACTTACAAAACCATTG
AATATGGCTGCTGGCGTTGGTGCCGCCGCATTGGGTTTGGCCGCCGGTGC
TATTGGATTCCCTGAAGCTGCTAATGATTGCAAGTCTCAGGTGAAAAAAG
CCTACAGACAATTCATGCCGTGTATGGATTATCCTGATTTATCCAAACAT
AATAACTGCTTGAGTAAAGTGTTGACACCGCAAATGTATACGAAGCTTCG
TGATTTGGTGTTCACGTGAAATTACCAAAGCTGTCTCAAGACAAACGTTT
CGATAACATTCTTCATGCATATCGTTTACAAAAACGTGGAACAGGAGGTG
TCGACACTGCTGCTGTTGGTGGTACCTTTGACATTTCAAACTTGGATCGT
CTTGGACATTCTGAAGTTGAACTGGTTCAACAAGTCATCAATGGTGTCAA
CAATTTGATTGACATGGAAAAATCCTTAGAAAAGGGTAAGAAGATTGACA
GCCTATTGCCCAAAAACATGTCACAATAGGTGGCAAATTTGATGAGAAAT
ATGTCTTGAGTTCACGCGTGCGAACAGGGCGTTCCATCAAGGGACATTCT
TTACCACCACACTGTACTCGTGCTGAACGTCGCAGTGTTGAACACATTGT
TACATCCGCCTTGAACTCGTTACAAGGTGATCTGTCTGGTACTTATTATC
CGTTATCTGGAATGACCGACGATGAACAGCAACAATTGATCGATGATCAT
TTCTTGTTTGATAAACCAGTTTCTCCATTGTTGACCTGTGCTGGAATGGC
ACGTGACTGGCCTGATGCACGTGGTATCTGGCATAACAAAAACAAAAATT
TCCTTATCTGGATCAACGAGGAAGATCACACTCGTGTCATCTCTATGGAG
AAGGGTGGAGATATGAAGAAAGTCTTTGAACGATTCTGCCGTGGATTGAA
AGAAGTTGAGAAACATATTGAGGAGCATGGTCATGGATTTATGTGGTCTG
AACGTCTTGGATATATCTTGACTTGTCCATCCAACCTTGGAACTGGCCTA
AGAGCTGCAAACACCATCAGGTTATACACTTGATATGGCAATCCAAACAG
GCGTCGACAATCCCGGACATCCGTTCATTTCAACGGTCGGTGTTGTTGCC
GGTGATGAAGAATCTTATGAAGTCTTCAAAGAATTGATGGACCCCATCAT
CCGAGACAGACATAATGGTTTCGGACCAAATGATCGCCATAAGACTGATC
TTGACGCCTCCAAAATTAAAGATGGCTGCTATGTTACGAGCACTTACAAA
ACCATTGAATATGGCTGCTGGCGTTGGTGCCGCCGCATTGGGTTTGGCCG
CCGGTGCTATTGGATTCCCTGAAGCTGCTAATGATTGCAAGTCTCAGGTG
AAAAAAGCCTACAGACAATTCATGCCGTGTATGGATTATCCTGATTTATC
CAAACATAATAACTGCTTGAGTAAAGTGTTGACACCGCAAATGTATACGA
AGCTTCGTGATTTGGTGTTCACGTGAAATTACCAAAGCTGTCTCAAGACA
AACGTTTCGATAACATTCTTCATGCATATCGTTTACAAAAACGTGGAACA
GGAGGTGTCGACACTGCTGCTGTTGGTGGTACCTTTGACATTTCAAACTT
GGATCGTCTTGGACATTCTGAAGTTGAACTGGTTCAACAAGTCATCAATG
GTGTCAACAATTTGATTGACATGGAAAAATCCTTAGAAAAGGGTAAGAAG
ATTGACAGCCTATTGCCCAAAAACATGTCACAATAGGTGGCAAATTTGAT
GAGAAATATGTCTTGAGTTCACGCGTGCGAACAGGGCGTTCCATCAAGGG
ACATTCTTTACCACCACACTGTACTCGTGCTGAACGTCGCAGTGTTGAAC
ACATTGTTACATCCGCCTTGAACTCGTTACAAGGTGATCTGTCTGGTACT
TATTATCCGTTATCTGGAATGACCGACGATGAACAGCAACAATTGATCGA
TGATCATTTCTTGTTTGATAAACCAGTTTCTCCATTGTTGACCTGTGCTG
GAATGGCACGTGACTGGCCTGATGCACGTGGTATCTGGCATAACAAAAAC
AAAAATTTCCTTATCTGGATCAACGAGGAAGATCACACTCGTGTCATCTC
TATGGAGAAGGGTGGAGATATGAAGAAAGTCTTTGAACGATTCTGCCGTG
GATTGAAAGAAGTTGAGAAACATATTGAGGAGCATGGTCATGGATTTATG
TGGTCTGAACGTCTTGGATATATCTTGACTTGTCCATCCAACCTTGGAAC
TGGCCTAAGAGCTGCAAACACCATCAGGTTATACACTTGATATGGCAATC
CAAACAGGCGTCGACAATCCCGGACATCCGTTCATTTCAACGGTCGGTGT
TGTTGCCGGTGATGAAGAATCTTATGAAGTCTTCAAAGAATTGATGGACC
CCATCATCCGAGACAGACATAATGGTTTCGGACCAAATGATCGCCATAAG
ACTGATCTTGACGCCTCCAAAATTAAAGATGGCTGCTATGTTACGAGCAC
TTACAAAACCATTGAATATGGCTGCTGGCGTTGGTGCCGCCGCATTGGGT
TTGGCCGCCGGTGCTATTGGATTCCCTGAAGCTGCTAATGATTGCAAGTC
TCAGGTGAAAAAAGCCTACAGACAATTCATGCCGTGTATGGATTATCCTG
ATTTATCCAAACATAATAACTGCTTGAGTAAAGTGTTGACACCGCAAATG
TATACGAAGCTTCGTGATTTGGTGTTCACGTGAAATTACCAAAGCTGTCT
CAAGACAAACGTTTCGATAACATTCTTCATGCATATCGTTTACAAAAACG
TGGAACAGGAGGTGTCGACACTGCTGCTGTTGGTGGTACCTTTGACATTT
CAAACTTGGATCGTCTTGGACATTCTGAAGTTGAACTGGTTCAACAAGTC
ATCAATGGTGTCAACAATTTGATTGACATGGAAAAATCCTTAGAAAAGGG
TAAGAAGATTGACAGCCTATTGCCCAAAAACATGTCACAATAGGTGGCAA
ATTTGATGAGAAATATGTCTTGAGTTCACGCGTGCGAACAGGGCGTTCCA
TCAAGGGACATTCTTTACCACCACACTGTACTCGTGCTGAACGTCGCAGT
GTTGAACACATTGTTACATCCGCCTTGAACTCGTTACAAGGTGATCTGTC
TGGTACTTATTATCCGTTATCTGGAATGACCGACGATGAACAGCAACAAT
TGATCGATGATCATTTCTTGTTTGATAAACCAGTTTCTCCATTGTTGACC
TGTGCTGGAATGGCACGTGACTGGCCTGATGCACGTGGTATCTGGCATAA
CAAAAACAAAAATTTCCTTATCTGGATCAACGAGGAAGATCACACTCGTG
TCATCTCTATGGAGAAGGGTGGAGATATGAAGAAAGTCTTTGAACGATTC
TGCCGTGGATTGAAAGAAGTTGAGAAACATATTGAGGAGCATGGTCATGG
ATTTATGTGGTCTGAACGTCTTGGATATATCTTGACTTGTCCATCCAACC
TTGGAACTGGCCTAAGAGCTGCAAACACCATCAGGTTATACACTTGATAT
GGCAATCCAAACAGGCGTCGACAATCCCGGACATCCGTTCATTTCAACGG
TCGGTGTTGTTGCCGGTGATGAAGAATCTTATGAAGTCTTCAAAGAATTG
ATGGACCCCATCATCCGAGACAGACATAATGGTTTCGGACCAAATGATCG
CCATAAGACTGATCTTGACGCCTCCAAAATTAAAGATGGCTGCTATGTTA
CGAGCACTTACAAAACCATTGAATATGGCTGCTGGCGTTGGTGCCGCCGC
ATTGGGTTTGGCCGCCGGTGCTATTGGATTCCCTGAAGCTGCTAATGATT
GCAAGTCTCAGGTGAAAAAAGCCTACAGACAATTCATGCCGTGTATGGAT
TATCCTGATTTATCCAAACATAATAACTGCTTGAGTAAAGTGTTGACACC
GCAAATGTATACGAAGCTTCGTGATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004844XLOC_004844Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008644-exon-sc0000086-1575043694:966725..966793TCONS_00008644-exon-sc0000086-1575043694:966725..966793Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1575043694:964379..964640TCONS_00008644-exon-sc0000086-1575043694:964379..964640Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1575043694:963812..964025TCONS_00008644-exon-sc0000086-1575043694:963812..964025Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1575043694:962879..963406TCONS_00008644-exon-sc0000086-1575043694:962879..963406Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1575043694:960850..962723TCONS_00008644-exon-sc0000086-1575043694:960850..962723Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1510915933:966725..966793TCONS_00008644-exon-sc0000086-1510915933:966725..966793Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1510915933:964379..964640TCONS_00008644-exon-sc0000086-1510915933:964379..964640Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1510915933:963812..964025TCONS_00008644-exon-sc0000086-1510915933:963812..964025Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1510915933:962879..963406TCONS_00008644-exon-sc0000086-1510915933:962879..963406Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1510915933:960850..962723TCONS_00008644-exon-sc0000086-1510915933:960850..962723Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1491911889:966725..966793TCONS_00008644-exon-sc0000086-1491911889:966725..966793Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1491911889:964379..964640TCONS_00008644-exon-sc0000086-1491911889:964379..964640Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1491911889:963812..964025TCONS_00008644-exon-sc0000086-1491911889:963812..964025Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1491911889:962879..963406TCONS_00008644-exon-sc0000086-1491911889:962879..963406Clytia hemisphaericaexon
TCONS_00008644-exon-sc0000086-1491911889:960850..962723TCONS_00008644-exon-sc0000086-1491911889:960850..962723Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008644-proteinTCONS_00008644-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:960850..966793 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.144372	0.0627264	0.138743	0.118778	0.0652631	0.0337676	0.0860476	0.019562	0.129951	0.0986901	0.149241	0.291336	0.0224968	0	0.0497054	0	0.0144981	0.052012	0.0861895	0.0546699	0	0.0183323	0.0322419	0.0139905	1.21363	0.965626	0.018722	0.0189618	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR022413ATP-guanido_PTrfase_N
IPR022414ATP-guanido_PTrfase_cat
IPR014746Gln_synth/guanido_kin_cat_dom
IPR022415ATP-guanido_PTrfase_AS
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0016772transferase activity, transferring phosphorus-containing groups
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0016772 transferase activity, transferring phosphorus-containing groups
Blast
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BLAST of TCONS_00008644 vs. Swiss-Prot (Human)
Match: KCRS (Creatine kinase S-type, mitochondrial OS=Homo sapiens GN=CKMT2 PE=1 SV=2)

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 269/369 (72.90%), Postives = 311/369 (84.28%), Query Frame = 2 
Query:  209 SQVKKAYRQFMPCMDYPDLSKHNNCLSKVLTPQMYTKLRDLQTPSGYTLDMAIQTGVDNPGHPFISTVGVVAGDEESYEVFKELMDPIIRDRHNGFGPND-RHKTDLDASKIKGGKFDEKYVLSSRVRTGRSIKGHSLPPHCTRAERRSVEHIVTSALNSLQGDLSGTYYPLSGMTDDEQQQLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNKNKNFLIWINEEDHTRVISMEKGGDMKKVFERFCRGLKEVEKHIEEHGHGFMWSERLGYILTCPSNLGTGLRAGVHVKLPKLSQDKRFDNILHAYRLQKRXXXXXXXXXXXXXFDISNLDRLGHSEVELVQQVINGVNNLIDMEKSLEKGKKI 1312
            ++V++  R F P  DYPDL KHNNC+++ LTP +Y KLR+  TP+GYTLD  IQTGVDNPGHPFI TVG+VAGDEESYEVF +L DP+I+ RHNG+ P   +H TDLDASKI  G+FDE YVLSSRVRTGRSI+G SLPP CTRAERR VE++  +AL  L+GDL+G YY LS MT+ +QQ+LIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHN +K FLIWINEEDHTRVISMEKGG+MK+VFERFCRGLKEVE+ I+E G  FMW+ERLGYILTCPSNLGTGLRAGVHV++PKLS+D RF  IL   RLQKRGTGGVDTAAV   +DISN+DR+G SEVELVQ VI+GVN L+D EK LE+G+ I
Sbjct:   39 AEVREQPRLFPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVGMVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHTTDLDASKITQGQFDEHYVLSSRVRTGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKLSKDPRFSKILENLRLQKRGTGGVDTAAVADVYDISNIDRIGRSEVELVQIVIDGVNYLVDCEKKLERGQDI 407
The following BLAST results are available for this feature:
BLAST of TCONS_00008644 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCRS0.000e+072.90Creatine kinase S-type, mitochondrial OS=Homo sapi... [more]
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