TCONS_00008627 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00008627
Unique Name	TCONS_00008627
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2048

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000086:564286..567423-
coding sequence from alignment at sc0000086:564286..567423-

transcript sequence

>TCONS_00008627 ID=TCONS_00008627|Name=TCONS_00008627|organism=Clytia hemisphaerica|type=transcript|length=2048bp
TGTGAGCGATGATAAAATCCTTGAATCAAGTGTTGCGAGCGATGACAAAA
TTCTTGAACCAACTGTTGCGAGCaatgacaaaatctttaaatcaaGTGTT
GCGAGCAATGACAAAATCCTTGAACCAAGTGTTGTGAGCGATGACAAAAT
CCTTGAATCAGGTGTTACGACCGAAGACAAAATCCTTGAATCAAGTGTCA
CAAGCGATGATAAGTTTTTTAAAGTGAGTGTCGCCAGTGATCGCAATGTC
TTTGATGACGATGATGTATTTGAGACAGCTCCGACGTCGACCTCATCATC
AAATATCTTCCTTTCTACGAGTCCATCAATGGAGTTTTTGGATCAAACTG
CCAAGGGAACTGATTCCCAACAACGGGAAAAGGCCGTCAGATTTTCTTCT
GACATCGAGGTGTTAGAGAGATCGTCAATCGAGGAATGTTATTCAAAACA
CCCAGACGATAATGTTAGATCTTTATGTAACATTGATGTCTTGGAGAAAT
TATCAACTGAGGAATGCTTTTCAGATCTTCCCAAGGCTACTGTAAAATCT
TTATGTAATTTTAAAAACGAAGGAGTTTCTGCAACTGCCGTTGTAACTGA
GTCCGCCGAAAAGTCTTCTGCAGAAAAACCGACAGAAGAAGTTGACACGA
CCAACAATATCACTGTATCCAATAGTGATAGTGGACAAGATTTCGTCAAG
CTTTACATGGGGTCTAGCGATCATACCGAACCCACCATGGACAAACAGAA
GCTTGACACTACCACAAATCTGATCACAAAAATCGAATTACCAAGCATTG
TAGTTACTGGCTCCGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCT
CAAGGTGTATCAAATCTGATCACAAAAATCGAATTACCAAGCATAATAGT
TACTGGCCCCGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAG
GTGTAGATGTAGTTGATAAAACAGAAAATCCTTCCGAGCGAACAGACCCT
ACCGTCGTGGAAATCTCATCAGTCTTGGAAACTACACCACTACGAGAACA
CGAGACAGTTGAGTCAGAAACGTCGACCGAGACAATCCAACACGTTGGAG
ACAATGCTTCTGATAGCAGTGGTGATTCGTTGGTCGTAATTGTCGATTCA
GGTTCTAAATTGGACATAGTGGGAAGTGTTTCGAGAGCAAGCACAAGCCT
GGCTGACATCCATGGCCAGTCCTCGGCAACATCGAGTAGTCTGCTATCAG
AGAATGTAGACGTCATGAGCGATTATTCCTCAAAGGAAACATTTAACCAG
ACGAAAATTAATTGTTTGGAGAAGATCATTACAGGATTTATAGACCAACA
GGAAAAAGATGAAATATACATCGCATCCTTGCTGGAAGAGTTGAGTTGCA
AAGTTAACATCATTTCAGAATGTGCTAAGAGGGAAACAAACCTCAAGAGG
AAATACGAACTAGACAAACACTATCTACAACAAAGCTCGGTCTCTACCGA
GAGACAGCTCAATGAAATTATTTTGTCTACACGCTATGAAAGCGATATGA
AGGACAGAGAGATGTTCAATGCTAGAAACAAGTATCAGAACTTGGTCGAG
GCTCTTGTCGAGAAAGACAAACGCTACAAACAAGAGGTCAGCGCTCGAAA
AAGAATTGAGTTGGAATTAGAAGACTCCAAACAAGAGCTCAAGCATGCTT
TTAAGTTCTTGAATAATTTGCACAAAAGTCACACCGAGTTGCAACATGGA
CATAAAGAATTGTTAGGAGAAGCAACAAGAAAgAATGAAGTTGATCCAAA
TTCATTAAGCAACGCATCGGTTGACCAAACGACTCGTGAACACCCtgcca
acaaaaacaaaaaagggcTTTACAGTCCCAGCGAGCCAACAATAGGTCTT
CTACAAATCGATACCATCACTAAAGAATGCGAATCCCAGTGTTCATCCAC
AAACAGACACCCATCGTCTTCATCGACAAGTAAACCAGATGTAGATGAAC
ACAGTGTctacaacaaaaacaaaaaagggaTTTACAGTCCCAGCGAGC

Run BLAST on NCBI

protein sequence of TCONS_00008627-protein

>TCONS_00008627-protein ID=TCONS_00008627-protein|Name=TCONS_00008627-protein|organism=Clytia hemisphaerica|type=polypeptide|length=682bp
VSDDKILESSVASDDKILEPTVASNDKIFKSSVASNDKILEPSVVSDDKI
LESGVTTEDKILESSVTSDDKFFKVSVASDRNVFDDDDVFETAPTSTSSS
NIFLSTSPSMEFLDQTAKGTDSQQREKAVRFSSDIEVLERSSIEECYSKH
PDDNVRSLCNIDVLEKLSTEECFSDLPKATVKSLCNFKNEGVSATAVVTE
SAEKSSAEKPTEEVDTTNNITVSNSDSGQDFVKLYMGSSDHTEPTMDKQK
LDTTTNLITKIELPSIVVTGSEKSENGENALTSQGVSNLITKIELPSIIV
TGPEKSENGENALTSQGVDVVDKTENPSERTDPTVVEISSVLETTPLREH
ETVESETSTETIQHVGDNASDSSGDSLVVIVDSGSKLDIVGSVSRASTSL
ADIHGQSSATSSSLLSENVDVMSDYSSKETFNQTKINCLEKIITGFIDQQ
EKDEIYIASLLEELSCKVNIISECAKRETNLKRKYELDKHYLQQSSVSTE
RQLNEIILSTRYESDMKDREMFNARNKYQNLVEALVEKDKRYKQEVSARK
RIELELEDSKQELKHAFKFLNNLHKSHTELQHGHKELLGEATRKNEVDPN
SLSNASVDQTTREHPANKNKKGLYSPSEPTIGLLQIDTITKECESQCSST
NRHPSSSSTSKPDVDEHSVYNKNKKGIYSPSE

Run BLAST on NCBI

transcript from alignment at sc0000086:564286..567423-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00008627 ID=TCONS_00008627|Name=TCONS_00008627|organism=Clytia hemisphaerica|type=transcript|length=3138bp|location=Sequence derived from alignment at sc0000086:564286..567423- (Clytia hemisphaerica)
TGTGAGCGATGATAAAATCCTTGAATCAAGTGTTGCGAGCGATGACAAAA
TTCTTGAACCAACTGTTGCGAGCAATGACAAAATCTTTAAATCAAGTGTT
GCGAGCAATGACAAAATCCTTGAACCAAGTGTTGTGAGCGATGACAAAAT
CCTTGAATCAGGTGTTACGACCGAAGACAAAATCCTTGAATCAAGTGTCA
CAAGCGATGATAAGTTTTTTAAAGTGAGTGTCGCCAGTGATCGCAATGTC
TTTGATGACGATGATGTATTTGAGACAGCTCCGACGTCGACCTCATCATC
AAATATCTTCCTTTCTACGAGTCCATCAATGGAGTTTTTGGATCAAACTG
CCAAGGGAACTGATTCCCAACAACGGGAAAAGGCCGTCAGATTTTCTTCT
GACATCGAGGTGTTAGAGAGATCGTCAATCGAGGAATGTTATTCAAAACA
CCCAGACGATAATGTTAGATCTTTATGTAACATTGATGTCTTGGAGAAAT
TATCAACTGAGGAATGCTTTTCAGATCTTCCCAAGGCTACTGTAAAATCT
TTATGTAATTTTAAAAACGAAGGAGTTTCTGCAACTGCCGTTGTAACTGA
GTCCGCCGAAAAGTCTTCTGCAGAAAAACCGACAGAAGAAGTTGACACGA
CCAACAATATCACTGTATCCAATAGTGATAGTGGACAAGATTTCGTCAAG
CTTTACATGGGGTCTAGCGATCATACCGAACCCACCATGGACAAACAGAA
GCTTGACACTACCACAAATCTGATCACAAAAATCGAATTACCAAGCATTG
TAGTTACTGGCTCCGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCT
CAAGGTGTATCAAATCTGATCACAAAAATCGAATTACCAAGCATAATAGT
TACTGGCCCCGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAG
GTGTAGATGTAGTTGATAAAACAGAAAATCCTTCCGAGCGAACAGACCCT
ACCGTCGTGGAAATCTCATCAGTCTTGGAAACTACACCACTACGAGAACA
CGAGACAGTTGAGTCAGAAACGTCGACCGAGACAATCCAACACGTTGGAG
ACAATGCTTCTGATAGCAGTGGTGATTCGTTGGTCGTAATTGTCGATTCA
GGTAAAGCTTGTACTTGATTTTTCGAGATCTCTCAACTAACGTGAAAGTT
GTTGGTTTTCTACTTTAGAATACTATTCTTCAATGTCTAAAGCAAGGCAA
TATTCTTAGAAAATGATGTTACTTCATTGTCTGGAATATCAGACAAAACT
TCTAAATTAAAAGAGTAATATTATACATTGATATAATATTTTTATTTTTA
TATATCTTTCAGGTTCTAAATTGGACATAGTGGGAAGTGTTTCGAGAGCA
AGCACAAGCCTGGCTGACATCCATGGCCAGTCCTCGGCAACATCGAGTAG
TCTGCTATCAGAGAATGTAGACGTCATGAGCGATTATTCCTCAAAGGAAA
CATTTAACCAGACGAAAATTAATTGTTTGGAGAAGATCATTACAGGATTT
ATAGACCAACAGGAAAAAGATGAAATATACATCGCATCCTTACTGGAAGA
GTTGAGTTGCAAAGTTAACATCATTTCAGAATGTGCTAAGAGGGAAACAA
ACCTCANACATCGCATCCTTGCTGGAAGAGTTGAGTTGCAAAGTTAACAT
CATTTCAGAATGTGCTAAGAGGGAAACAAACCTCAAGAGGAAATACGAAC
TAGACAAACACTATCTACAACAAAGCTCGGTCTCTACCGAGAGACAGCTC
AATGAAATTATTTTGTCTACACGCTATGAAAGCGATATGAAGGACAGAGA
GATGTTCAATGCTAGAAACAAGTATCAGAACTTGGTCGAGGCTCTTGTCG
AGAAAGACAAACGCTACAAACAAGAGGTATGAAATGTTTTTGACTATAGA
TGTTGGAACATAATTATCATCAACTTAAGCACTCCTTAGTTTGAATTTTT
CTTTGATTTAAACGGATATATTTTCACTTCAACTTCGAATAGTGAATCTA
ACCAAATTTACAAATCTATGTAATATAAGTAATACGAACAAATCTTATCG
GCAACCTGAATGTGCTGGTATGTGCTTTTCATATTGGTCACACGGAAGAT
ACACTATATAATCTTTAAAAATTGATATCTTTTTGCAGGTCAGCGCTCGA
AAAAGAATTGAGTTGGAATTAGAAGACTCCAAACAAGAGCTCAAGCATGC
TTTTAAGTTCTTGAATAATTTGCACAAAAGTCACACCGAGTTGCAACATG
GACATAAAGAATTGTTAGGAGAAGCAACAAGAAAGTAAGTTACAATCTCT
CAAGCTGATGTACGACGTTATTTGAACGTCCATCTAATGTTTTATGTATG
TTACAGAATCTTTCCCCTCGTTTTTTTAAAGACTAATGTACAAGCGACGA
GGTCAAGCAAAAAAGGCATAGAAAATAGATGACAGAAAAATTTCAATTTT
GACTGCAAAATGCCCTTGGAAAAAAGAACCATTCCAAATTTCAAAAATAT
CCTTTTCATGATATAGAAAACAGGCGCGCCTCTTATTCTGAAAAAGTAGA
GTTTACAACAGAAATTTTCAAAAGTAATTCTTTTTTTCGGCTTAAAAATA
CTGTGTGAGCAAATGGGAGGTGATACGTTAAATGATGTACAATATTGAAT
ATATTTTCAGGAATGAAGTTGATCCAAATTCATTAAGCAACGCATCGGTT
GACCAAACGACTCGTGAACACCCTGCCAACAAAAACAAAAAAGGGCTTTA
CAGTCCCAGCGAGCCAACAATAGGTCTTCTACAAATCGATACAAACACTA
AAGGATGCGAATCCCAGTGTTCATCCACAAACAGACACCCATCATCTTCA
TCGACAAGTAAACCAGATGTAGATGAACACAGTGTCTATAGCAAAAACAA
AAAAGGGATTTACAGTCCCAGCGAGCCAACAATAGGTCTTCTACAAATCG
ATACCATCACTAAAGAATGCGAATCCCAGTGTTCATCCACAAACAGACAC
CCATCGTCTTCATCGACAAGTAAACCAGATGTAGATGAACACAGTGTCTA
CAACAAAAACAAAAAAGGGATTTACAGTCCCAGCGAGC

Coding sequence (CDS) from alignment at sc0000086:564286..567423-

>TCONS_00008627 ID=TCONS_00008627|Name=TCONS_00008627|organism=Clytia hemisphaerica|type=CDS|length=12276bp|location=Sequence derived from alignment at sc0000086:564286..567423- (Clytia hemisphaerica)
GTCTTCTACAAATCGATACCATCACTAAAGAATGCGAATCCCAGTGTTCA
TCCACAAACAGACACCCATCGTCTTCATCGACAAGTAAACCAGATGTAGA
TGAACACAGTGTCTACAACAAAAACAAAAAAGGGATTTACAGTCCCAGCG
AGGAATGAAGTTGATCCAAATTCATTAAGCAACGCATCGGTTGACCAAAC
GACTCGTGAACACCCTGCCAACAAAAACAAAAAAGGGCTTTACAGTCCCA
GCGAGCCAACAATAGGTCAGCGCTCGAAAAAGAATTGAGTTGGAATTAGA
AGACTCCAAACAAGAGCTCAAGCATGCTTTTAAGTTCTTGAATAATTTGC
ACAAAAGTCACACCGAGTTGCAACATGGACATAAAGAATTGTTAGGAGAA
GCAACAAGAAAATCGCATCCTTGCTGGAAGAGTTGAGTTGCAAAGTTAAC
ATCATTTCAGAATGTGCTAAGAGGGAAACAAACCTCAAGAGGAAATACGA
ACTAGACAAACACTATCTACAACAAAGCTCGGTCTCTACCGAGAGACAGC
TCAATGAAATTATTTTGTCTACACGCTATGAAAGCGATATGAAGGACAGA
GAGATGTTCAATGCTAGAAACAAGTATCAGAACTTGGTCGAGGCTCTTGT
CGAGAAAGACAAACGCTACAAACAAGAGGTTCTAAATTGGACATAGTGGG
AAGTGTTTCGAGAGCAAGCACAAGCCTGGCTGACATCCATGGCCAGTCCT
CGGCAACATCGAGTAGTCTGCTATCAGAGAATGTAGACGTCATGAGCGAT
TATTCCTCAAAGGAAACATTTAACCAGACGAAAATTAATTGTTTGGAGAA
GATCATTACAGGATTTATAGACCAACAGGAAAAAGATGAAATATACGTGA
GCGATGATAAAATCCTTGAATCAAGTGTTGCGAGCGATGACAAAATTCTT
GAACCAACTGTTGCGAGCAATGACAAAATCTTTAAATCAAGTGTTGCGAG
CAATGACAAAATCCTTGAACCAAGTGTTGTGAGCGATGACAAAATCCTTG
AATCAGGTGTTACGACCGAAGACAAAATCCTTGAATCAAGTGTCACAAGC
GATGATAAGTTTTTTAAAGTGAGTGTCGCCAGTGATCGCAATGTCTTTGA
TGACGATGATGTATTTGAGACAGCTCCGACGTCGACCTCATCATCAAATA
TCTTCCTTTCTACGAGTCCATCAATGGAGTTTTTGGATCAAACTGCCAAG
GGAACTGATTCCCAACAACGGGAAAAGGCCGTCAGATTTTCTTCTGACAT
CGAGGTGTTAGAGAGATCGTCAATCGAGGAATGTTATTCAAAACACCCAG
ACGATAATGTTAGATCTTTATGTAACATTGATGTCTTGGAGAAATTATCA
ACTGAGGAATGCTTTTCAGATCTTCCCAAGGCTACTGTAAAATCTTTATG
TAATTTTAAAAACGAAGGAGTTTCTGCAACTGCCGTTGTAACTGAGTCCG
CCGAAAAGTCTTCTGCAGAAAAACCGACAGAAGAAGTTGACACGACCAAC
AATATCACTGTATCCAATAGTGATAGTGGACAAGATTTCGTCAAGCTTTA
CATGGGGTCTAGCGATCATACCGAACCCACCATGGACAAACAGAAGCTTG
ACACTACCACAAATCTGATCACAAAAATCGAATTACCAAGCATTGTAGTT
ACTGGCTCCGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAGG
TGTATCAAATCTGATCACAAAAATCGAATTACCAAGCATAATAGTTACTG
GCCCCGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAGGTGTA
GATGTAGTTGATAAAACAGAAAATCCTTCCGAGCGAACAGACCCTACCGT
CGTGGAAATCTCATCAGTCTTGGAAACTACACCACTACGAGAACACGAGA
CAGTTGAGTCAGAAACGTCGACCGAGACAATCCAACACGTTGGAGACAAT
GCTTCTGATAGCAGTGGTGATTCGTTGGTCGTAATTGTCGATTCAGGTCT
TCTACAAATCGATACCATCACTAAAGAATGCGAATCCCAGTGTTCATCCA
CAAACAGACACCCATCGTCTTCATCGACAAGTAAACCAGATGTAGATGAA
CACAGTGTCTACAACAAAAACAAAAAAGGGATTTACAGTCCCAGCGAGGA
ATGAAGTTGATCCAAATTCATTAAGCAACGCATCGGTTGACCAAACGACT
CGTGAACACCCTGCCAACAAAAACAAAAAAGGGCTTTACAGTCCCAGCGA
GCCAACAATAGGTCAGCGCTCGAAAAAGAATTGAGTTGGAATTAGAAGAC
TCCAAACAAGAGCTCAAGCATGCTTTTAAGTTCTTGAATAATTTGCACAA
AAGTCACACCGAGTTGCAACATGGACATAAAGAATTGTTAGGAGAAGCAA
CAAGAAAATCGCATCCTTGCTGGAAGAGTTGAGTTGCAAAGTTAACATCA
TTTCAGAATGTGCTAAGAGGGAAACAAACCTCAAGAGGAAATACGAACTA
GACAAACACTATCTACAACAAAGCTCGGTCTCTACCGAGAGACAGCTCAA
TGAAATTATTTTGTCTACACGCTATGAAAGCGATATGAAGGACAGAGAGA
TGTTCAATGCTAGAAACAAGTATCAGAACTTGGTCGAGGCTCTTGTCGAG
AAAGACAAACGCTACAAACAAGAGGTTCTAAATTGGACATAGTGGGAAGT
GTTTCGAGAGCAAGCACAAGCCTGGCTGACATCCATGGCCAGTCCTCGGC
AACATCGAGTAGTCTGCTATCAGAGAATGTAGACGTCATGAGCGATTATT
CCTCAAAGGAAACATTTAACCAGACGAAAATTAATTGTTTGGAGAAGATC
ATTACAGGATTTATAGACCAACAGGAAAAAGATGAAATATACGTGAGCGA
TGATAAAATCCTTGAATCAAGTGTTGCGAGCGATGACAAAATTCTTGAAC
CAACTGTTGCGAGCAATGACAAAATCTTTAAATCAAGTGTTGCGAGCAAT
GACAAAATCCTTGAACCAAGTGTTGTGAGCGATGACAAAATCCTTGAATC
AGGTGTTACGACCGAAGACAAAATCCTTGAATCAAGTGTCACAAGCGATG
ATAAGTTTTTTAAAGTGAGTGTCGCCAGTGATCGCAATGTCTTTGATGAC
GATGATGTATTTGAGACAGCTCCGACGTCGACCTCATCATCAAATATCTT
CCTTTCTACGAGTCCATCAATGGAGTTTTTGGATCAAACTGCCAAGGGAA
CTGATTCCCAACAACGGGAAAAGGCCGTCAGATTTTCTTCTGACATCGAG
GTGTTAGAGAGATCGTCAATCGAGGAATGTTATTCAAAACACCCAGACGA
TAATGTTAGATCTTTATGTAACATTGATGTCTTGGAGAAATTATCAACTG
AGGAATGCTTTTCAGATCTTCCCAAGGCTACTGTAAAATCTTTATGTAAT
TTTAAAAACGAAGGAGTTTCTGCAACTGCCGTTGTAACTGAGTCCGCCGA
AAAGTCTTCTGCAGAAAAACCGACAGAAGAAGTTGACACGACCAACAATA
TCACTGTATCCAATAGTGATAGTGGACAAGATTTCGTCAAGCTTTACATG
GGGTCTAGCGATCATACCGAACCCACCATGGACAAACAGAAGCTTGACAC
TACCACAAATCTGATCACAAAAATCGAATTACCAAGCATTGTAGTTACTG
GCTCCGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAGGTGTA
TCAAATCTGATCACAAAAATCGAATTACCAAGCATAATAGTTACTGGCCC
CGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAGGTGTAGATG
TAGTTGATAAAACAGAAAATCCTTCCGAGCGAACAGACCCTACCGTCGTG
GAAATCTCATCAGTCTTGGAAACTACACCACTACGAGAACACGAGACAGT
TGAGTCAGAAACGTCGACCGAGACAATCCAACACGTTGGAGACAATGCTT
CTGATAGCAGTGGTGATTCGTTGGTCGTAATTGTCGATTCAGGTCTTCTA
CAAATCGATACCATCACTAAAGAATGCGAATCCCAGTGTTCATCCACAAA
CAGACACCCATCGTCTTCATCGACAAGTAAACCAGATGTAGATGAACACA
GTGTCTACAACAAAAACAAAAAAGGGATTTACAGTCCCAGCGAGGAATGA
AGTTGATCCAAATTCATTAAGCAACGCATCGGTTGACCAAACGACTCGTG
AACACCCTGCCAACAAAAACAAAAAAGGGCTTTACAGTCCCAGCGAGCCA
ACAATAGGTCAGCGCTCGAAAAAGAATTGAGTTGGAATTAGAAGACTCCA
AACAAGAGCTCAAGCATGCTTTTAAGTTCTTGAATAATTTGCACAAAAGT
CACACCGAGTTGCAACATGGACATAAAGAATTGTTAGGAGAAGCAACAAG
AAAATCGCATCCTTGCTGGAAGAGTTGAGTTGCAAAGTTAACATCATTTC
AGAATGTGCTAAGAGGGAAACAAACCTCAAGAGGAAATACGAACTAGACA
AACACTATCTACAACAAAGCTCGGTCTCTACCGAGAGACAGCTCAATGAA
ATTATTTTGTCTACACGCTATGAAAGCGATATGAAGGACAGAGAGATGTT
CAATGCTAGAAACAAGTATCAGAACTTGGTCGAGGCTCTTGTCGAGAAAG
ACAAACGCTACAAACAAGAGGTTCTAAATTGGACATAGTGGGAAGTGTTT
CGAGAGCAAGCACAAGCCTGGCTGACATCCATGGCCAGTCCTCGGCAACA
TCGAGTAGTCTGCTATCAGAGAATGTAGACGTCATGAGCGATTATTCCTC
AAAGGAAACATTTAACCAGACGAAAATTAATTGTTTGGAGAAGATCATTA
CAGGATTTATAGACCAACAGGAAAAAGATGAAATATACGTGAGCGATGAT
AAAATCCTTGAATCAAGTGTTGCGAGCGATGACAAAATTCTTGAACCAAC
TGTTGCGAGCAATGACAAAATCTTTAAATCAAGTGTTGCGAGCAATGACA
AAATCCTTGAACCAAGTGTTGTGAGCGATGACAAAATCCTTGAATCAGGT
GTTACGACCGAAGACAAAATCCTTGAATCAAGTGTCACAAGCGATGATAA
GTTTTTTAAAGTGAGTGTCGCCAGTGATCGCAATGTCTTTGATGACGATG
ATGTATTTGAGACAGCTCCGACGTCGACCTCATCATCAAATATCTTCCTT
TCTACGAGTCCATCAATGGAGTTTTTGGATCAAACTGCCAAGGGAACTGA
TTCCCAACAACGGGAAAAGGCCGTCAGATTTTCTTCTGACATCGAGGTGT
TAGAGAGATCGTCAATCGAGGAATGTTATTCAAAACACCCAGACGATAAT
GTTAGATCTTTATGTAACATTGATGTCTTGGAGAAATTATCAACTGAGGA
ATGCTTTTCAGATCTTCCCAAGGCTACTGTAAAATCTTTATGTAATTTTA
AAAACGAAGGAGTTTCTGCAACTGCCGTTGTAACTGAGTCCGCCGAAAAG
TCTTCTGCAGAAAAACCGACAGAAGAAGTTGACACGACCAACAATATCAC
TGTATCCAATAGTGATAGTGGACAAGATTTCGTCAAGCTTTACATGGGGT
CTAGCGATCATACCGAACCCACCATGGACAAACAGAAGCTTGACACTACC
ACAAATCTGATCACAAAAATCGAATTACCAAGCATTGTAGTTACTGGCTC
CGAGAAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAGGTGTATCAA
ATCTGATCACAAAAATCGAATTACCAAGCATAATAGTTACTGGCCCCGAG
AAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAGGTGTAGATGTAGT
TGATAAAACAGAAAATCCTTCCGAGCGAACAGACCCTACCGTCGTGGAAA
TCTCATCAGTCTTGGAAACTACACCACTACGAGAACACGAGACAGTTGAG
TCAGAAACGTCGACCGAGACAATCCAACACGTTGGAGACAATGCTTCTGA
TAGCAGTGGTGATTCGTTGGTCGTAATTGTCGATTCAGGTCTTCTACAAA
TCGATACCATCACTAAAGAATGCGAATCCCAGTGTTCATCCACAAACAGA
CACCCATCGTCTTCATCGACAAGTAAACCAGATGTAGATGAACACAGTGT
CTACAACAAAAACAAAAAAGGGATTTACAGTCCCAGCGAGGAATGAAGTT
GATCCAAATTCATTAAGCAACGCATCGGTTGACCAAACGACTCGTGAACA
CCCTGCCAACAAAAACAAAAAAGGGCTTTACAGTCCCAGCGAGCCAACAA
TAGGTCAGCGCTCGAAAAAGAATTGAGTTGGAATTAGAAGACTCCAAACA
AGAGCTCAAGCATGCTTTTAAGTTCTTGAATAATTTGCACAAAAGTCACA
CCGAGTTGCAACATGGACATAAAGAATTGTTAGGAGAAGCAACAAGAAAA
TCGCATCCTTGCTGGAAGAGTTGAGTTGCAAAGTTAACATCATTTCAGAA
TGTGCTAAGAGGGAAACAAACCTCAAGAGGAAATACGAACTAGACAAACA
CTATCTACAACAAAGCTCGGTCTCTACCGAGAGACAGCTCAATGAAATTA
TTTTGTCTACACGCTATGAAAGCGATATGAAGGACAGAGAGATGTTCAAT
GCTAGAAACAAGTATCAGAACTTGGTCGAGGCTCTTGTCGAGAAAGACAA
ACGCTACAAACAAGAGGTTCTAAATTGGACATAGTGGGAAGTGTTTCGAG
AGCAAGCACAAGCCTGGCTGACATCCATGGCCAGTCCTCGGCAACATCGA
GTAGTCTGCTATCAGAGAATGTAGACGTCATGAGCGATTATTCCTCAAAG
GAAACATTTAACCAGACGAAAATTAATTGTTTGGAGAAGATCATTACAGG
ATTTATAGACCAACAGGAAAAAGATGAAATATACGTGAGCGATGATAAAA
TCCTTGAATCAAGTGTTGCGAGCGATGACAAAATTCTTGAACCAACTGTT
GCGAGCAATGACAAAATCTTTAAATCAAGTGTTGCGAGCAATGACAAAAT
CCTTGAACCAAGTGTTGTGAGCGATGACAAAATCCTTGAATCAGGTGTTA
CGACCGAAGACAAAATCCTTGAATCAAGTGTCACAAGCGATGATAAGTTT
TTTAAAGTGAGTGTCGCCAGTGATCGCAATGTCTTTGATGACGATGATGT
ATTTGAGACAGCTCCGACGTCGACCTCATCATCAAATATCTTCCTTTCTA
CGAGTCCATCAATGGAGTTTTTGGATCAAACTGCCAAGGGAACTGATTCC
CAACAACGGGAAAAGGCCGTCAGATTTTCTTCTGACATCGAGGTGTTAGA
GAGATCGTCAATCGAGGAATGTTATTCAAAACACCCAGACGATAATGTTA
GATCTTTATGTAACATTGATGTCTTGGAGAAATTATCAACTGAGGAATGC
TTTTCAGATCTTCCCAAGGCTACTGTAAAATCTTTATGTAATTTTAAAAA
CGAAGGAGTTTCTGCAACTGCCGTTGTAACTGAGTCCGCCGAAAAGTCTT
CTGCAGAAAAACCGACAGAAGAAGTTGACACGACCAACAATATCACTGTA
TCCAATAGTGATAGTGGACAAGATTTCGTCAAGCTTTACATGGGGTCTAG
CGATCATACCGAACCCACCATGGACAAACAGAAGCTTGACACTACCACAA
ATCTGATCACAAAAATCGAATTACCAAGCATTGTAGTTACTGGCTCCGAG
AAAAGTGAAAACGGAGAAAATGCATTGACATCTCAAGGTGTATCAAATCT
GATCACAAAAATCGAATTACCAAGCATAATAGTTACTGGCCCCGAGAAAA
GTGAAAACGGAGAAAATGCATTGACATCTCAAGGTGTAGATGTAGTTGAT
AAAACAGAAAATCCTTCCGAGCGAACAGACCCTACCGTCGTGGAAATCTC
ATCAGTCTTGGAAACTACACCACTACGAGAACACGAGACAGTTGAGTCAG
AAACGTCGACCGAGACAATCCAACACGTTGGAGACAATGCTTCTGATAGC
AGTGGTGATTCGTTGGTCGTAATTGTCGATTCAGGTCTTCTACAAATCGA
TACCATCACTAAAGAATGCGAATCCCAGTGTTCATCCACAAACAGACACC
CATCGTCTTCATCGACAAGTAAACCAGATGTAGATGAACACAGTGTCTAC
AACAAAAACAAAAAAGGGATTTACAGTCCCAGCGAGGAATGAAGTTGATC
CAAATTCATTAAGCAACGCATCGGTTGACCAAACGACTCGTGAACACCCT
GCCAACAAAAACAAAAAAGGGCTTTACAGTCCCAGCGAGCCAACAATAGG
TCAGCGCTCGAAAAAGAATTGAGTTGGAATTAGAAGACTCCAAACAAGAG
CTCAAGCATGCTTTTAAGTTCTTGAATAATTTGCACAAAAGTCACACCGA
GTTGCAACATGGACATAAAGAATTGTTAGGAGAAGCAACAAGAAAATCGC
ATCCTTGCTGGAAGAGTTGAGTTGCAAAGTTAACATCATTTCAGAATGTG
CTAAGAGGGAAACAAACCTCAAGAGGAAATACGAACTAGACAAACACTAT
CTACAACAAAGCTCGGTCTCTACCGAGAGACAGCTCAATGAAATTATTTT
GTCTACACGCTATGAAAGCGATATGAAGGACAGAGAGATGTTCAATGCTA
GAAACAAGTATCAGAACTTGGTCGAGGCTCTTGTCGAGAAAGACAAACGC
TACAAACAAGAGGTTCTAAATTGGACATAGTGGGAAGTGTTTCGAGAGCA
AGCACAAGCCTGGCTGACATCCATGGCCAGTCCTCGGCAACATCGAGTAG
TCTGCTATCAGAGAATGTAGACGTCATGAGCGATTATTCCTCAAAGGAAA
CATTTAACCAGACGAAAATTAATTGTTTGGAGAAGATCATTACAGGATTT
ATAGACCAACAGGAAAAAGATGAAATATACGTGAGCGATGATAAAATCCT
TGAATCAAGTGTTGCGAGCGATGACAAAATTCTTGAACCAACTGTTGCGA
GCAATGACAAAATCTTTAAATCAAGTGTTGCGAGCAATGACAAAATCCTT
GAACCAAGTGTTGTGAGCGATGACAAAATCCTTGAATCAGGTGTTACGAC
CGAAGACAAAATCCTTGAATCAAGTGTCACAAGCGATGATAAGTTTTTTA
AAGTGAGTGTCGCCAGTGATCGCAATGTCTTTGATGACGATGATGTATTT
GAGACAGCTCCGACGTCGACCTCATCATCAAATATCTTCCTTTCTACGAG
TCCATCAATGGAGTTTTTGGATCAAACTGCCAAGGGAACTGATTCCCAAC
AACGGGAAAAGGCCGTCAGATTTTCTTCTGACATCGAGGTGTTAGAGAGA
TCGTCAATCGAGGAATGTTATTCAAAACACCCAGACGATAATGTTAGATC
TTTATGTAACATTGATGTCTTGGAGAAATTATCAACTGAGGAATGCTTTT
CAGATCTTCCCAAGGCTACTGTAAAATCTTTATGTAATTTTAAAAACGAA
GGAGTTTCTGCAACTGCCGTTGTAACTGAGTCCGCCGAAAAGTCTTCTGC
AGAAAAACCGACAGAAGAAGTTGACACGACCAACAATATCACTGTATCCA
ATAGTGATAGTGGACAAGATTTCGTCAAGCTTTACATGGGGTCTAGCGAT
CATACCGAACCCACCATGGACAAACAGAAGCTTGACACTACCACAAATCT
GATCACAAAAATCGAATTACCAAGCATTGTAGTTACTGGCTCCGAGAAAA
GTGAAAACGGAGAAAATGCATTGACATCTCAAGGTGTATCAAATCTGATC
ACAAAAATCGAATTACCAAGCATAATAGTTACTGGCCCCGAGAAAAGTGA
AAACGGAGAAAATGCATTGACATCTCAAGGTGTAGATGTAGTTGATAAAA
CAGAAAATCCTTCCGAGCGAACAGACCCTACCGTCGTGGAAATCTCATCA
GTCTTGGAAACTACACCACTACGAGAACACGAGACAGTTGAGTCAGAAAC
GTCGACCGAGACAATCCAACACGTTGGAGACAATGCTTCTGATAGCAGTG
GTGATTCGTTGGTCGTAATTGTCGATTCAGGTCTTCTACAAATCGATACC
ATCACTAAAGAATGCGAATCCCAGTGTTCATCCACAAACAGACACCCATC
GTCTTCATCGACAAGTAAACCAGATGTAGATGAACACAGTGTCTACAACA
AAAACAAAAAAGGGATTTACAGTCCCAGCGAGGAATGAAGTTGATCCAAA
TTCATTAAGCAACGCATCGGTTGACCAAACGACTCGTGAACACCCTGCCA
ACAAAAACAAAAAAGGGCTTTACAGTCCCAGCGAGCCAACAATAGGTCAG
CGCTCGAAAAAGAATTGAGTTGGAATTAGAAGACTCCAAACAAGAGCTCA
AGCATGCTTTTAAGTTCTTGAATAATTTGCACAAAAGTCACACCGAGTTG
CAACATGGACATAAAGAATTGTTAGGAGAAGCAACAAGAAAATCGCATCC
TTGCTGGAAGAGTTGAGTTGCAAAGTTAACATCATTTCAGAATGTGCTAA
GAGGGAAACAAACCTCAAGAGGAAATACGAACTAGACAAACACTATCTAC
AACAAAGCTCGGTCTCTACCGAGAGACAGCTCAATGAAATTATTTTGTCT
ACACGCTATGAAAGCGATATGAAGGACAGAGAGATGTTCAATGCTAGAAA
CAAGTATCAGAACTTGGTCGAGGCTCTTGTCGAGAAAGACAAACGCTACA
AACAAGAGGTTCTAAATTGGACATAGTGGGAAGTGTTTCGAGAGCAAGCA
CAAGCCTGGCTGACATCCATGGCCAGTCCTCGGCAACATCGAGTAGTCTG
CTATCAGAGAATGTAGACGTCATGAGCGATTATTCCTCAAAGGAAACATT
TAACCAGACGAAAATTAATTGTTTGGAGAAGATCATTACAGGATTTATAG
ACCAACAGGAAAAAGATGAAATATACGTGAGCGATGATAAAATCCTTGAA
TCAAGTGTTGCGAGCGATGACAAAATTCTTGAACCAACTGTTGCGAGCAA
TGACAAAATCTTTAAATCAAGTGTTGCGAGCAATGACAAAATCCTTGAAC
CAAGTGTTGTGAGCGATGACAAAATCCTTGAATCAGGTGTTACGACCGAA
GACAAAATCCTTGAATCAAGTGTCACAAGCGATGATAAGTTTTTTAAAGT
GAGTGTCGCCAGTGATCGCAATGTCTTTGATGACGATGATGTATTTGAGA
CAGCTCCGACGTCGACCTCATCATCAAATATCTTCCTTTCTACGAGTCCA
TCAATGGAGTTTTTGGATCAAACTGCCAAGGGAACTGATTCCCAACAACG
GGAAAAGGCCGTCAGATTTTCTTCTGACATCGAGGTGTTAGAGAGATCGT
CAATCGAGGAATGTTATTCAAAACACCCAGACGATAATGTTAGATCTTTA
TGTAACATTGATGTCTTGGAGAAATTATCAACTGAGGAATGCTTTTCAGA
TCTTCCCAAGGCTACTGTAAAATCTTTATGTAATTTTAAAAACGAAGGAG
TTTCTGCAACTGCCGTTGTAACTGAGTCCGCCGAAAAGTCTTCTGCAGAA
AAACCGACAGAAGAAGTTGACACGACCAACAATATCACTGTATCCAATAG
TGATAGTGGACAAGATTTCGTCAAGCTTTACATGGGGTCTAGCGATCATA
CCGAACCCACCATGGACAAACAGAAGCTTGACACTACCACAAATCTGATC
ACAAAAATCGAATTACCAAGCATTGTAGTTACTGGCTCCGAGAAAAGTGA
AAACGGAGAAAATGCATTGACATCTCAAGGTGTATCAAATCTGATCACAA
AAATCGAATTACCAAGCATAATAGTTACTGGCCCCGAGAAAAGTGAAAAC
GGAGAAAATGCATTGACATCTCAAGGTGTAGATGTAGTTGATAAAACAGA
AAATCCTTCCGAGCGAACAGACCCTACCGTCGTGGAAATCTCATCAGTCT
TGGAAACTACACCACTACGAGAACACGAGACAGTTGAGTCAGAAACGTCG
ACCGAGACAATCCAACACGTTGGAGACAATGCTTCTGATAGCAGTGGTGA
TTCGTTGGTCGTAATTGTCGATTCAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004827	XLOC_004827	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00008627-protein	TCONS_00008627-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000086	supercontig	sc0000086:564286..567423 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0192919	0	0.152903	0.0641106	0	0	0.0248027	0	0	0	0	0.0256966	0	0	0	0	0	0.0148439	0	0	0	0.0272941	0	0	0.227841	0.0554571	0	0	0.0214125	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00008627 vs. Swiss-Prot (Human)

BLAST of TCONS_00008627 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00008627 (transcript) - C. hemisphaerica