TCONS_00008605 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008605
Unique NameTCONS_00008605
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3125

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008605 ID=TCONS_00008605|Name=TCONS_00008605|organism=Clytia hemisphaerica|type=transcript|length=3125bp
ATGGAACGCATGCGCACAAGTTTCATCAAGAAAGACGACGACATTTTTAA
ACCGggaatttcatcaaaatcaaaaataaagttCGAAATAACTGGTAGTT
TCGTCAAAAAGAAAACACGTGGGTACAAAATTCATTCAAAGCAATTTAGT
GACGGAAGTGTTTGGTAATACGTTGGTATATTAATTTGACAAACTCGCTT
ACATTTTTGTAAATTGAAGAGAGAAAAAGGATTTTGAAATGGGTGAAACA
ATGGTTGAGACTGCAAGACCCGAAGAAAAAACAGAAGAAGAACAGAGTAC
GATAGCAAAAGAATTGATGGTGAAACACCCTTTACAAAATCGCTGGTCGC
TGTGGTTCTTTAAAAACGACAAATCAAAGAATTGGGCAGCTAACTTGAGA
CGAATCACCACATTTGACTCAGTAGAAGACTTTTGGAGCATTTACAATCA
CATTCAGTTGGCTAGTAAATTAAGTTTAGGTTGTGATTATTCATTATTCA
AGGAAGGAGTGCAGCCTATGTGGGAAGACGACAGAAACAGAATGGGTGGT
AGATGGCTGGTCAATATGAGCAAAGCACAAAGAAATTCTGATTTGGACAG
AGTTTGGCTGGAAACGCTTCTTTGTCTCATTGGTGAAGCATTTGGTGAAG
ACTCAGATCAAGTTTGTGGTGCTGTTGTCAATATTCGTGCAAAAGGAGAT
AAACTAGCAGTATGGACACAATTTGCAGATAAATCTGAATCAGTTTTACA
CATAGGAAAAATGTTCAAGGAAAGGCTGACATTACCTGCTAAATTCCCAA
TTATGTACGAGAAACACATGGATACGGCCAACAAAACTGGATCACAGACA
AAAAATAAATACCAATTATAGTAGACTAagtaatttagaattttttaaat
gaaaaaaaaaggaatgatttcaaaattattttttgggtgAGCGCTGCTGA
TAGGTGTTTTAAATTCTATTATGTGGCACACACAAACTTAATGTGAAACC
TTTGgacattttggtattttgaattGGTTTTAAAAGATCTGACCATGGAA
TGGATTGGTGGAGTGCTATATTAAGAATTACCAGAAATTGAGAGAGTATG
TACATAAAAATCACGGTACACAGATATTGCAAACAATATTATTGAGTTTC
CGCCATTATGAATCCAAATCATGCTGGAGAGACAGAGCCACGATGGAGTT
GTTCATTGTGCAACCAAACATTTTGAACAGTAAAGAGATGATTCTATTGG
AATTTTTGCTACATTTGTGTTGGAactttagaaaaactaaatgacTTTTT
GGAATCATGGTTTGAGTATTGGAAGATTACACCTATCCACCTTTAAAGCT
TGAGGAGACTGGGGTAAAGTTTGCCAGAGGGGAGCGATGAGAGATGAGAA
AATCGATGTAACAACTATTCtatccatgatatgcaccactgcaatgactc
tacgaaattatgcaacttttctgtttttgtgccacccaatacgtcactgt
ttctattgtttaagtgacgtatttggtggaaaattttaaaagttctcaga
agactctccagcaatgcatatcatgaatagacatAAGACGACAATCCTGC
TTGGCAAACTCTGTCCATGATCTCCTCGCGCTTTGAGGGTTGTTATAAGG
TACATTAATAATATTTCTCCTCCTAgacaaaacaatttcataaatgaTAT
TTTATCTATATTATTCAGTTATTTTTCAGTCTTCAATAAGTTTTTtccta
ttttattttattggtagatttttttttctttaaaaagagagagagaatTT
TTAAATAGTTAAAAGTAATGAATTTGATAGTTTATTCGTcatgtttttct
tcaaataatttttttcttcacccgAAACCTCCTAAATTATTTCATACTTT
TATTAACATTAGTTGGAGGCGTCTAACCTAGCTTTCAACCATGCCTATTA
TTATGCTTTGAAGTCAAGGCAAAATCACAAAAGGGAATGAGATATTATTT
TGGACACCCACAAGGATTTTATTCGTAGGATTTTGGTTTTTCTGGTTCTT
TGCTGTTGTGTGAGTAAATTTCCCTTTTACATTAACCTCAGATATTATAA
TCtcgattttgtttttttatggtTCTTTCTCTAGCAAGTCTTTAAAAGCT
AGCCTTTGTAAATCATATCAAaggattttttttactttgaccCAAGGATC
AAAGTCCTTATTACAGGAACTGTCTGTTGAATTTCCTGTCAAACCCACAT
CACTCACACCACGCTAGTAAGGGGAGACGATTTATCAACAATAATATAAG
ATgatcttttttatataagaactaTGATACAACACTATGTGCTTTTAAAG
AACCATAGTAGTAAATCAATATGCACTCTACTCGATATGTGAATCATCGT
TGGCCTTGTTTTCAAATGGAACGGTTACTTCAACGGACACCATTAATTCG
TATTCCCGAAATactttcttcaattttgatataaatCACACGTAAACAAC
TACCTCAAACGATCATTTCCTAGAGTCTaatggtaatttttttcaacttt
cttccttagaaaatattgttttcaaacAAATCCTGCCACGATTTCACGCA
TTTCGAAAAGAGTGTATTGATATTGTTTTGATGTAGAGATTTTTCCTCTC
CTCTCCTATCGATTCCCTTCCTGCCAATTTCAAACATAAACACTCCActt
cttattttctttcattATAGTTCTTATTAATTAGCTTTAAATTAAAAGCC
CTTTCTCTGATTTCTCAAAATGATTACTTTTTTGAAAGCCCAACACAGTT
TTGTTTTAAACGAACATATTCTATTGATAGCCTGatgaaaagagaaaaca
aattggctgagattttttaaacagcgagttttttttgtttgttcttttgA
TAAGCTGTATCATGTAAACTGAgccttttgaagaattttttttcaaatat
ttttgggcATTTACGCCATATAATGAATAGTTGATATTTCACGTATGTCC
TAATAGAACTAATGTTTTCAACAGTTATTGTGTTATTTTATTAGGAAAAG
TTATAAATTTTTTACATTCTTGCTATCTAATCtagtttgtgaaaaaaaaa
agatatcgTTGGTTGATCTTCTTCG
Run BLAST on NCBI

protein sequence of TCONS_00008605-protein

>TCONS_00008605-protein ID=TCONS_00008605-protein|Name=TCONS_00008605-protein|organism=Clytia hemisphaerica|type=polypeptide|length=210bp
MGETMVETARPEEKTEEEQSTIAKELMVKHPLQNRWSLWFFKNDKSKNWA
ANLRRITTFDSVEDFWSIYNHIQLASKLSLGCDYSLFKEGVQPMWEDDRN
RMGGRWLVNMSKAQRNSDLDRVWLETLLCLIGEAFGEDSDQVCGAVVNIR
AKGDKLAVWTQFADKSESVLHIGKMFKERLTLPAKFPIMYEKHMDTANKT
GSQTKNKYQL
Run BLAST on NCBI

transcript from alignment at sc0000086:204200..218425-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008605 ID=TCONS_00008605|Name=TCONS_00008605|organism=Clytia hemisphaerica|type=transcript|length=14226bp|location=Sequence derived from alignment at sc0000086:204200..218425- (Clytia hemisphaerica)
ATGGAACGCATGCGCACAAGTTTCATCAAGAAAGACGACGACATTTTTAA
ACCGGTGAGTTCGATGTCTATCTATGTCAAACACTCAGTCAATCATAATT
GTACATAAAAGGCAAAGTGATTTTCGGTCTGAAAACAAATTTGTTTTTTC
TAATTTAACGTTGAATGACCTAAATGGGTAACCAGAAACTTTTGATACTT
ATTTATCTTAGGGAATTTCATCAAAATCAAAAATAAAGTTCGAAATAACT
GGTAGTTTCGTCAAAAAGAAAACACGTGGGTACAAAATTCATTCAAAGCA
ATTTAGTGACGGAAGTGTTTGGTAATACGTTGGTATATTAATTTGACAAA
CTCGCTTACATTTTTGTAAATTGAAGAGAGAAAAAGGATTTTGAAATGGG
TGAAACAATGGTTGAGACTGCAAGACCCGAAGAAAAAACAGAAGAAGAAC
AGGTAAAAGTTTTTGCTGAGTTGGGTCCTCCTGTTTATCCTCATATTATA
CAGTATACAATCAAAAGCTTTTTCCAATCAATGACATATCAATAACCAAT
GGATTGATTGGATATTGATTGATTCTGATAATCAATAGGTAATCAAGACT
ATTATATATACTGTAAAATCTTGAGTATCGATTGATCATTGAATGTTTTT
TCATCAAATTGCCTATGGATTGTCCCGACGGTGTCAATCAAATAACTTTG
AACAAAAATCGCAATTGAACCAATTGAATGAATGTAACCGAGCGTGATCG
AATAGAATAATTGCGATTCAATTGTCGAACGTTATCGAATCTCAATTGAA
CGGCTGATTCCTGGGTAATATTCGATTGTGTTTCATTGCGTTCGAGTAAG
GTTAGATTGGCTCGATTGATAGTTGACTATGTTCGATATTGGTTTGATTG
ATTTTCAATTACATTGGATTAATCTTCGATTTCGTTCGATTACAATTATG
TCCAATGAGTTTTATTGCGATTAAATTAAATTGGATCACTCTGTTAGAGC
TCTTTAGCGTGGGCGGCCGGGTTCTTGAAGTACCATACCAAAGCAAATAA
AATCTAATACAATTGAATGAATCAAACTTAATCGAATACAATCAAACGTA
ATCGAATACAATAGACCTTTTCGCCTTTCCATCCACCATATTGAATTGTA
TGCAAAAATTATAGCGGCCGAATTGCTGTGGTGAAATTCCCTTAGAAAGT
ATGCACAACATATGCAAAAAGAAAGTATTATAAAACTTACATGCATAATT
GGCATTATATTAAAGTGTAATCTTGTAGAAGAAAGATTAAATTTGCTTCT
CTTGAAAACTAAAAATAATTATATTCGCTCAATAATATTTGACATAAATT
CAAACTGAAAAATCATCAGCAAAGGTAAATTATTCACCTGGGAATAGAGC
CGTCAAATGATCAAATCAAAACATTGATAATGTGTGACGTCATAATTACT
GCTTTTCAGTTTGCGTGTTTTGAAAGGTTGATGTGTGTACTCCAACTTTG
TGGAATTTCTTAATGGCATGAAAACAGAATATGTGACCCCCCCAAGCGAT
TTGGAGTACATTAAAAGTGAGACCGGTCTTGGTGCGGACAGATCGATAAT
ATGTGCGGCAAAAAAGCGGCGAAAAGATTACCGTTCGGTAAAATGATACC
TTTGTATCTACCAGAAATTAACCAAAAATCTTTTCTAGAAATTCCATTCA
AACGCACTTGATCGGTCACTAAAGAGCACCATTAGAATGAGTGCGGTATT
CAGTGCGGTCATGGTGCAGACATTTTGTTTTTATTGTTTTGCTTGTTTGA
ACTCGAGGCTGAAATTCTTACGGCAATCGAAAGAAATGTAAACAAACCGC
GGGGACCGCACCATCGTCTGCTTTCGTCGGCTTTCGTCGGCACTTTGTCC
GCACGGACCATACGGTACTGTGCGGTCTTCTGGCTGCTTTTTTCAGCTTT
TAGTCGCACAATTAACCAGTCCAAAAGCGGCAGAAGCATGACCGGACCAA
TACCGGTCTCATTTTTAATGTACTCCAAATCGCTTGGGGGGTCACATATG
CTATGTCTTAAAAGAACAAATTTCTAAAAGGCTTTTGTTGTTCTGTGAAT
ATTTCTATTTGGATTGAGAAATTCCATCTTTTATTGTTCTCATGATTATA
ATAATTATTTATAAGATGCTTTGTTGTCTTTTTAATCTTTGTGTAAACTT
GCCTATGTTTTGCATACTTTCCAACTAAATCCAACCACAGCTTTTTTGTT
CCTCTATTTTTGCATACAATTCAAGATGGCAGATGGAAAGGCGAAAAGGT
CTATCGAACGTAATCAAAGCAATCAAACAGCGAATCCTAGGTAATATTCA
ATTGCGATTCAATTGCGTTCGACAATCGAATTGCAAATTATTTGATTGCA
TTCAAATGCGTTCGATTGATTCGGCGTTCGATTGATTCGGCGTTCGATTC
GTTCGATTGACACCGTCTGGGATTGTGATCAAACGATCATCTTGGAGTCA
GTCAATGAATAATCCATCAATACACTGTTTAGGAGTGTTGACTGCGCATA
ACGTCCAAACAATTTTTCATTGTTTTGATTTTAGCAACCGCAGGAAACTT
AACCCTCTCCCGTAAAAAAACGCTAGGTAAAAATCCGATTCTCTTAAAAG
GAAACCCAGCAGAGAAACGGTAGGTACAGTAACTAAAGAACTCCTTTTAA
TCATATTCTTTTCTTAAATGAATTTTTGTGAAATTCTCAGGAGAGATCCC
TAAAATTTATCATTGTTTTATGTTTAAATCTAAATCATTCTCTTTAAACC
AGACGGTTCTAATCAATAAGGGGTCACTCACAAATCGATTTTAGGTTAGA
AAAATGTCAATTGACGTTTTTAGTGGTAGTAAGACCACAGTAAGACCAAA
GCTAGGTATTCAATCCTTGTAAGCTTTGCTGACGATACTAGAATCCTTAA
TAAAGAAATCCAAGGAATAATTAAGACATATTCAAGTTGCAACATGATCT
CAACATAGTTTATGATTGGACTCATAACAATAACATGAAACTAAATAGTT
GTAAATTCGAACATTTCAAATACGGTAAAGATACTGAATCAAAAAGTTTA
TCAACCTATTTCACTAATGACAAAATTGTAATTGAAAACAAAAACTCTGT
TAAAGATTTTGGAGTTTGGATGAGTAGTGACTGCTCATTCACAGATCACA
TTAATAAAATGATAGCAAAAGCTAAGGACATTTCTAGTTGGATTTTGAGA
ACATTCAACAACAGAAGCAGTGATGTTATGATAACGTTATGGAAATCCTT
AGTTTCTCCCTCACCTCGACTACTGTTCTCAGCTTTGGTCACCAAACAGC
ATCCACCAAATTGAACAGATTCATTCTGTACAAAAGAACTTCTTCAATAA
AATCAAAGGCCTTAGTGCTTTCGTTTATTGGGAACAAATTGAAAATGTTG
AAAATGTATTCTCTACAAAGGAGGAGGGAGAGATCCAGAATTATTTATAT
CTGGTCGATACTAGAGTGTACAGTACAAAATTTCAGCCACACTGAAGGAG
ATGGCACTTTAAAAGGTGGTGTCTCATCTTCAACTACGAGCTGGGTTGGT
CGAAAATGCCAACTACAAACAATCAAACGAAGTAGCTTTCGCAAATTTAT
TTTTGAGAGCTTGGCTGTACAGGGTCCAAAACTCTTCAACAGTATTCCCT
CTGACATACGAAATATCACTGGCTGTTCAAAAGACTCATTCAAGAAACAA
CTCGATAAATATCTGTGCTCTATACCCGACGAACATCACACTACGTCGCC
ACAAACAAGATTGGTTGAATCAAATGCTCTTTTCGATCAAATTATACGTG
TTGGGCTCAACGAGCTGGACAGATTAATATCATCAAATTAAACTGAAGTA
AACTGAAGTATAAGTATAGTGGGTGGATGGGTTAAAGGTTGTTAACGTTT
TTTTTTTCAAATCTAGAAACATGAATTTTTAATTCCATGCCAAATATTAC
TGCCCGCCATTTTTCTGTTTAATCACTTTGTCTGTTTTGAAAACCAAAAC
AAACGGCCTAATGTTAATGTCTTTTCTTTGTTTGACGGCCCGAACAGAGG
TGCAAACTCTCACGCATTGGACGCATTCCAACACTGTCTCATGCAATTTT
TCAAAAGTTTGATTTCTCACGCATTTTTTTATATTTTGAAAGAAATTTCC
TCCTTTTTCCGATTTTTTGGAAAAAGTTTCCCAGATTTTCTGATTTTCAG
AAAATTTTTTTCCTGATTTCTCCATTTTTGAATTTTTGGAAAATTTTTTC
CCAGGTTTCCAATTTTTTGGAAAACCTTTTCCGTTTTCCGATGTCAAAAA
ATCAGGCTAAGATTTCGGATTTCGCTTCAAAATTTTTATCTTGCGCAAAA
TGAACATCTCAAGTTGGCAGGTCTGCCCGAACGGCCCTTGAATTTTTGCA
GATGGGCAAAATTATTTTAAAGGGAACCAGAGACCACCTTGATTTCAAAA
GGATACTGTGCATAAAGTGGAGATTGTCATTGAATGATTTTAATTTCAGA
GGATGCACAATAATAAAAAATGCTGAAAAATGAGAGCTCATGCGAGTCTG
TAGCACAAGCGAAACTAAAGTTATGGCATTTTAAAGCTCAAAAACTGCCC
ATTTTTTCCATGAAACAGAGTGTCACCCAAAAATTTGCATTATTAAAGTG
GTTAATAAATTGACACTGACTGATGATCATGCTATCAAAGTCATGATTTT
TAGCCATAGCAACTATAACACTTTGAGAAAATCAAAAAGATTTTTGGTAA
CACTCAACCAATTTTTTAAATTCAATATGAATGCGGTACACATGATATGA
AACAGAATCAGCTGTAAAAATTTTATTTAACTTTAAACCCTATATAGGGT
TAATGGAAAGGTTTTCAAGATAGATCAAATGCTTAGATTTTGATACAAAG
TTACTGTATCAGCTTAAAAATGGTTAAGTGAAAATTTCATAATTTTTATC
TCAGTAAAGTAAGATAATTTTCCGTCATTCCGTAACCAAAAATGATTTCT
CAATTAAAAACCAGTCTTCCCCCAATGGCAATTAATTTATGCCTGGTTCG
AAAGTACTCAGTAAGAGGTAGAAACTTGCCAAATATTTTACTCTAAAAAT
GTTTCCTTAAAACTTTCCAGCATTTTTTATTTTTCCGTCATTCCGTAACC
AAGATTTTTGGAAAATAAAATCCTCAACCGTTCAATCCAGGGAAGGCCAA
ACATGCTGTAAATGAGTAAATGATGTTGGATTTTGAACAACTAAAACTGA
AGCATTCATTGTATTTTTTGTGATATGGCTGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGATACTATGAGAAATGATAC
ATATAAATTTGAAAATGTTAACTGAAAAAAAATTTTCAGCTCCCAGATGC
ACTTTTTGGTTCCCTTTAAAATAATTTTGCACAGATGGGCGTTCTTTCTG
TCGCTATAATACTACAGAGATAATTAATTACAGGAATTGTAAACAAGTTT
AGAAATTCGCGACCTTACTTCAACAAGGTTCCAACTCTGCAAATAGCGGT
TGTTAGTAAAATGCATTTGTTTGAAGCTTGGGTCTTTACTTTGCTTTTTG
GACCTACCTCTGGGTACCCCTGTGGAGGTTCTATAAATTAACCCATGTTC
GTTCGTTCGCCCGTCTGTTACCAGCTTTTCTCAGGATTGGTTCATTAGTT
TTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAGAACGTGA
CGGAGCCCGATTTTTGAGAAAAAAATTATTTCAAGGGCAAATTTGGGCCA
AAAATCATGGCTCGCAACCCCCCCCTGCCTGAGCGGGGGGAGCTACTCCT
AAATTTGCCATATAAGAGGTGGGAGCTGCTTCTCTTTCCAGACAGGCGGG
GGGAGCTCTATCTTGGGGGGAGCTCTATCTTGGGGGGACCTGCATTAGTT
TATGTAACTCTGGGGGCTAAATAACACTATCTAAATATTTTTCTTTACTG
TTGTTTTTTAATTTCTCTAAACCTTTATGTTTTCATGCAAAGTGTGATCT
GATCCTTAAAATGCAAAAATGAAGACATTCTATTGCATTCTCTAAAAGTG
CACACACATGTAAATAGACCTTTGTGAATGGCATAAAATTTTCCCCCTAT
ACTGGGACCTAAAATTTTATCAGGCTGGGGGGACCTTGTTCTCAGGGGGG
ACTTAAATTTGACAGGGACCTAGAACCCCAGTTGGAGCCATGTTTCAGTT
TCATATCAATATAATCTTCTATTTTCATGATAGTTCTAGGTTCTAACCTT
CAAGGCTCTAGGTTCTAACCTTCTAGGTTCTAGGTTCTAACCTTGTTGAC
CTTAAAATTATTGGAAAAGGCATTTATCACGAATCGTGCTAAGAATTTTT
CCTTGAAAATTTCCGATAGAACTTTGTTGTGATGTGCCAAAGACCAAATT
AACTGATAGAACTTAGTGGAATATGTTATTTTGAGCCATGGAATTAAGAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATC
AAGTACCATTTTGGGAATCTTTGGTATGACCCGGCTGGGGGTTGAACCCA
CAACCTTGCGAACCGTAGCCGGATGCTCTACCACTGTACTACGGTACTAG
ACGGTTAGGTGGTGGGTGTTCTCTAATTCTAGAGCAGTTGACGGTACTAT
CATATATCTTTAAGCAAAACCAAAAACATTGACCTAAAACCAAAGCACAA
AAAGAAGCACCAGCCATAAGATTGGCCCCCTATTTCCCCCACTATTTTGT
GTGCCTTCGCCCTGGGTTTCCTCAAGTAACTCATATTGCGCATTCTGATT
GGTCGGAGAAAACAAAAGTGGTTTTCGCACATGAATTGCATTTGATAAAA
TCGAAGGTATTTGATACAATTGAAGGTATTCAATATGATCGAAGGTAATC
GAAAAGTAATTGAAATGATTGAACAAATTGAAAATTCTAAAGAGAAATTC
TACACAACAAGAATAGAGTAACCCACCACTTGCTAAGTGAAGATACAGCT
TTCTGTTACATGAAAACAGGCAGCTTGGTAAAATCTGTGTGTTTCAAGAA
ATTTTGCGCAAGTCATCGATGACGCAAGAAACCAAAAAAAAAAACCAAGA
AAAGATAGAAGAGAAAAGCCGTAAGTGGGATAAAATGTTTGTTCGCCAAT
CTTTGAGATTTCCCAAGCTCATGATTACGTTATATGAAGACTCCCCGGAT
TGGCTAACATAAAAAAATAGAAGAAAAACTAAAAATTCATCCCCTGGAAA
ATATTTAGATTGTTTTAAATTTTGTTCAATTGCAAACGCTTGTGAAAGCG
CCAAATATTTTAAAATGGTAGAACTTAGCTGTGGTAGCTGGTGATAGATC
ATTTTCATGGAAGCTGTTGGAATGTTAATAAGGTTCTTGACACAGCTTGA
CAGAAAATCCTTTTAACAGAAAATTCTAAGTTTAAGATAAAATATTTTAC
ACACTTTCTATGAAAATATTGCCCGGCAGGCAAAAAATTTTCATATTCAT
GAGCTTCAATTTGAGTAATTGAAGCCAACTATTAAGCTGAATTATTTTAG
CCCCCAAAGTGATGCCCCTCATAAATGGTAGCATAACGGCATCAGATGAG
AATGTTTAGATGGTTAGGAACCCTCCACCATCAGAGATGGACATAGATCA
ATGGAGTGTATTCACTCTAAAAGCTATGGCTATGGCTATGGCTCCGTAAA
AGGATCTGCCTAGCTTGGGGAGCATCGCTTTGATCTTTTCATCCAGATTG
GGAATGAATATTAAATGGAGCAGGCTGATTGTCGCTAAAGCAAAATAATC
AGGCCAAAATCAACTGTTAATCACATGAACATTTGCATCAGTTGTTTTGC
TTTCCTTATCAAGCAAAAGCAAGGCGGTTTTGATTGTTTTGGCTGAACAA
CAAGGCCAGATTGTCACACTCACCATGTCCCATTTAGAGAAGAGCGTGGT
TTGCCCAGAATGGATGATATGTCAGTAAATCACAGACCAAAATTGAAGTT
TTAAATAAATCTAAAGGAATTTTTATTCTCATCTTCCAGAGTACGATAGC
AAAAGAATTGATGGTGAAACACCCTTTACAAAATCGCTGGTCGCTGTGGT
TCTTTAAAAACGACAAATCAAAGAATTGGGCAGCTAACTTGAGACGAATC
ACCACATTTGACTCAGTAGAAGACTTTTGGAGCATTTACAATCACATTCA
GTTGGCTAGTAAATTAAGTTTAGGTTGTGATTATTCATTATTCAAGGTAA
GAAAAATTTGCTTGTCTTCAATTTGGAAAAAGAGATACATCATCATTTTA
ATTTTTACACCACTCTTCAACACATTGAATCAGGCGGTCTGTTTAGATTT
TAAATTTAGATTTTCATCTTCTCACTATGAATAATTTCTGTAAATGAGCC
ATTACATTTCGCTACCTTAATAACGGTTTTATTTTTACATAAGTGGTCCC
GTTTTATATCAGACACATATTTCATATCAGGACCGTTTCTCTCTATTGTT
ATATTATGCTTATAAGCAAAAAATTTTGTTATTTTCCTCTTTCTGCCCGA
TCTTGCTCCACATCCGTGTCAATTCAATGTTAAAAAGCTTGTAAATTCAA
ATTGATGAGTAGGCATACGATACGACTCTTATTAAAAAAAACCTTTAATT
CAAAAGTCCATTAAACCTGATTTTCTTCTTTTACATCCTGAACTTGTTAT
TTCAGGAAGGAGTGCAGCCTATGTGGGAAGACGACAGAAACAGAATGGGT
GGTAGATGGCTGGTCAATATGAGCAAAGCACAAAGAAATTCTGATTTGGA
CAGAGTTTGGCTGGAAACGGTTTGTATTAGTAGTTTGATTCGCTCCCAAT
TTCTGTCTTTGAATCCCTTGGTAACTTTGTAGTCGACTGTGAATCAAAAA
TAAGAAAAAGTCATCTGTGGAAAGTATGTCTTTTCTGTGGAAAATTTAAA
ATAATGTAACCAGCTGTAATCCCTTTGATTCCCACATACCTTTCAATTTT
GTGAAACGCGTGATTAAACTAGGTAAACTAGGTAAAAAAACTATCCTAGT
AATTACAAGATGTAGAAAGGATTACAGGCTAATGCAAAGATGATGTCAGA
AAAATAGAGGCACTAAATAGAAAGCCAATCTGAAAATGAGTAATGGGATT
TTAAGGTAGAAGTTTGTTTGATTTCATTCTCCATTTGTCAAATCTTTTTA
TCAAACTAAATATCTTGGATATCTTTTTTCCGGTAGCTTCTTTGTCTCAT
TGGTGAAGCATTTGGTGAAGACTCAGATCAAGTTTGTGGTGCTGTTGTCA
ATATTCGTGCAAAAGGAGATAAACTAGCAGTATGGACACAATTTGCAGAT
AAATCTGAATCAGTTTTACACATAGGGTATGTCTGGATTTTCTTCAGTAA
TCCTTGTTATTTTGATCCTCCATTTTAATTAGCCACAAATTGTTGGCTAC
CTAACCAAATAAACAGCCAAAGATTTCTTGTCAGCAACAAGTCTTTCTTG
TTTTTTTGACAAATAAAAAGCTTGCTAATTTGGTGTTGTAATTAACACTT
TGATAAACTGTGGCCGGCTGCATGAGGTGGGGAAATTGCTTTTTTTCTGG
AAGATTGCTTGCCATTTACCTACCTTCTTTACCGGTAGATATATAGCTGG
ATATTTCTCTTGCCAGCAAAAGTGCCTTTTCACGATTGTTGCCAGAAAAC
TTTTATATCAGCTTATTGCATGTGGCGATTTATAAATAGTCAATCTGATC
AAGAGTGTTGCCGGCAAGATGTCCATTTATTTGGCTGGAATCACTTTATT
TTTATGCACTTAAACTGACTTAAAATTTGGCTATTTCATTTAATTTCCAT
ACAGAGGGTCAACAAACCTTTTTAAAAGCCAAAAAAAAATATGTAATAGC
CCCATGGCTTGGAGAATCACCTATGGGCTTTTCAAAGTAAACATCAACCC
TCGAGCAAAAAAGAAAGTTCTTTTAAAAGTTTTGCTGAAAAACTCTGTTT
TACACTGTAGTGCTCCTAAGCCCTTGCTGGAGCTGGCTGCACCAGGCTAG
ATAGAAGGTCCCTTTTGGATCAGTTTCAATAGTGCACATTATTATGAAGT
ATTTTATTGCTTGTCTAGCAAAAATTAATTGTTTTTGATTTCTTTGTCGT
ATAATATTCATTCTGTCCAAACTTGTTATTTTCTTACTTAGAAAAATGTT
CAAGGAAAGGCTGACATTACCTGCTAAATTCCCAATTATGTACGAGGTAA
TGATATTTTAATGGGCTTTTCTTTACAATTGCTTTGAATGAATACCTTGG
GGACATCAAAGTTTTAAAGTAAAAGGTGTTTCAGAAAAATTCGCTGAGTG
GCTGTAATTTTTTGGGAGAGTAATTTTTGTCTGACTTTCGGCCCGTTTTC
AAATAAGAAGTTCCTCAATGACTAACTTTATAGTAGTTTCAAAAATACCC
TTCGATAGATTTAATGATTGTGCTATCTTGTAATTATTCAGGTTCCTAAG
GATTTTCTTACTTAGCAAATAACTTTTTACGCTTTTACATGTTANTAACT
TTATAGTAGTTTCAAAAAATACCCTTCGATAGATTTAATGATTGTGCTAT
CTTGTAATTATTCAGGTTCCTAAGGATTTTCTTACTTAGCAAATAACTTT
TTACTCTCATAGAAACACATGGATACGGCCAACAAAACTGGATCACAGAC
AAAAAATAAATACCAATTATAGTAGACTAAGTAATTTAGAATTTTTTAAA
TGAAAAAAAAAGGAATGATTTCAAAATTATTTTTTGGGTGAGCGCTGCTG
ATAGGTGTTTTAAATTCTATTATGTGGCACACACAAACTTAATGTGAAAC
CTTTGGACATTTTGGTATTTTGAATTGGTTTTAAAAGATCTGACCATGGA
ATGGATTGGTGGAGTGCTATATTAAGAATTACCAGAAATTGAGAGAGTAT
GTACATAAAAATCACGGTACACAGATATTGCAAACAATATTATTGAGTTT
CCGCCATTATGAATCCAAATCATGCTGGAGAGACAGAGCCACGATGGAGT
TGTTCATTGTGCAACCAAACATTTTGAACAGTAAAGAGATGATTCTATTG
GAATTTTTGCTACATTTGTGTTGGAACTTTAGAAAAACTAAATGACTTTT
TGGAATCATGGTTTGAGTATTGGAAGATTACACCTATCCACCTTTAAAGC
TTGAGGAGACTGGGGTAAAGTTTGCCAGAGGGGAGCGATGAGAGATGAGA
AAATCGATGTAACAACTATTCTATCCATGATATGCACCACTGCAATGACT
CTACGAAATTATGCAACTTTTCTGTTTTTGTGCCACCCAATACGTCACTG
TTTCTATTGTTTAAGTGACGTATTTGGTGGAAAATTTTAAAAGTTCTCAG
AAGACTCTCCAGCAATGCATATCATGAATAGACATAAGACGACAATCCTG
CTTGGCAAACTCTGTCCATGATCTCCTCGCGCTTTGAGGGTTGTTATAAG
GTACATTAATAATATTTCTCCTCCTAGACAAAACAATTTCATAAATGATA
TTTTATCTATATTATTCAGTTATTTTTCAGTCTTCAATAAGTTTTTTCCT
ATTTTATTTTATTGGTAGATTTTTTTTTCTTTAAAAAGAGAGAGAGAATT
TTTAAATAGTTAAAAGTAATGAATTTGATAGTTTATTCGTCATGTTTTTC
TTCAAATAATTTTTTTCTTCACCCGAAACCTCCTAAATTATTTCATACTT
TTATTAACATTAGTTGGAGGCGTCTAACCTAGCTTTCAACCATGCCTATT
ATTATGCTTTGAAGTCAAGGCAAAATCACAAAAGGGAATGAGATATTATT
TTGGACACCCACAAGGATTTTATTCGTAGGATTTTGGTTTTTCTGGTTCT
TTGCTGTTGTGTGAGTAAATTTCCCTTTTACATTAACCTCAGATATTATA
ATCTCGATTTTGTTTTTTTATGGTTCTTTCTCTAGCAAGTCTTTAAAAGC
TAGCCTTTGTAAATCATATCAAAGGATTTTTTTTACTTTGACCCAAGGAT
CAAAGTCCTTATTACAGGAACTGTCTGTTGAATTTCCTGTCAAACCCACA
TCACTCACACCACGCTAGTAAGGGGAGACGATTTATCAACAATAATATAA
GATGATCTTTTTTATATAAGAACTATGATACAACACTATGTGCTTTTAAA
GAACCATAGTAGTAAATCAATATGCACTCTACTCGATATGTGAATCATCG
TTGGCCTTGTTTTCAAATGGAACGGTTACTTCAACGGACACCATTAATTC
GTATTCCCGAAATACTTTCTTCAATTTTGATATAAATCACACGTAAACAA
CTACCTCAAACGATCATTTCCTAGAGTCTAATGGTAATTTTTTTCAACTT
TCTTCCTTAGAAAATATTGTTTTCAAACAAATCCTGCCACGATTTCACGC
ATTTCGAAAAGAGTGTATTGATATTGTTTTGATGTAGAGATTTTTCCTCT
CCTCTCCTATCGATTCCCTTCCTGCCAATTTCAAACATAAACACTCCACT
TCTTATTTTCTTTCATTATAGTTCTTATTAATTAGCTTTAAATTAAAAGC
CCTTTCTCTGATTTCTCAAAATGATTACTTTTTTGAAAGCCCAACACAGT
TTTGTTTTAAACGAACATATTCTATTGATAGCCTGATGAAAAGAGAAAAC
AAATTGGCTGAGATTTTTTAAACAGCGAGTTTTTTTTGTTTGTTCTTTTG
ATAAGCTGTATCATGTAAACTGAGCCTTTTGAAGAATTTTTTTTCAAATA
TTTTTGGGCATTTACGCCATATAATGAATAGTTGATATTTCACGTATGTC
CTAATAGAACTAATGTTTTCAACAGTTATTGTGTTATTTTATTAGGAAAA
GTTATAAATTTTTTACATTCTTGCTATCTAATCTAGTTTGTGAAAAAAAA
AAGATATCGTTGGTTGATCTTCTTCG

Coding sequence (CDS) from alignment at sc0000086:204200..218425-

>TCONS_00008605 ID=TCONS_00008605|Name=TCONS_00008605|organism=Clytia hemisphaerica|type=CDS|length=3798bp|location=Sequence derived from alignment at sc0000086:204200..218425- (Clytia hemisphaerica)
AAACACATGGATACGGCCAACAAAACTGGATCACAGACAAAAAATAAATA
CCAATTATAGAAAAATGTTCAAGGAAAGGCTGACATTACCTGCTAAATTC
CCAATTATGTACGAGCTTCTTTGTCTCATTGGTGAAGCATTTGGTGAAGA
CTCAGATCAAGTTTGTGGTGCTGTTGTCAATATTCGTGCAAAAGGAGATA
AACTAGCAGTATGGACACAATTTGCAGATAAATCTGAATCAGTTTTACAC
ATAGGGAAGGAGTGCAGCCTATGTGGGAAGACGACAGAAACAGAATGGGT
GGTAGATGGCTGGTCAATATGAGCAAAGCACAAAGAAATTCTGATTTGGA
CAGAGTTTGGCTGGAAACGAGTACGATAGCAAAAGAATTGATGGTGAAAC
ACCCTTTACAAAATCGCTGGTCGCTGTGGTTCTTTAAAAACGACAAATCA
AAGAATTGGGCAGCTAACTTGAGACGAATCACCACATTTGACTCAGTAGA
AGACTTTTGGAGCATTTACAATCACATTCAGTTGGCTAGTAAATTAAGTT
TAGGTTGTGATTATTCATTATTCAAGATGGGTGAAACAATGGTTGAGACT
GCAAGACCCGAAGAAAAAACAGAAGAAGAACAGAAACACATGGATACGGC
CAACAAAACTGGATCACAGACAAAAAATAAATACCAATTATAGAAAAATG
TTCAAGGAAAGGCTGACATTACCTGCTAAATTCCCAATTATGTACGAGCT
TCTTTGTCTCATTGGTGAAGCATTTGGTGAAGACTCAGATCAAGTTTGTG
GTGCTGTTGTCAATATTCGTGCAAAAGGAGATAAACTAGCAGTATGGACA
CAATTTGCAGATAAATCTGAATCAGTTTTACACATAGGGAAGGAGTGCAG
CCTATGTGGGAAGACGACAGAAACAGAATGGGTGGTAGATGGCTGGTCAA
TATGAGCAAAGCACAAAGAAATTCTGATTTGGACAGAGTTTGGCTGGAAA
CGAGTACGATAGCAAAAGAATTGATGGTGAAACACCCTTTACAAAATCGC
TGGTCGCTGTGGTTCTTTAAAAACGACAAATCAAAGAATTGGGCAGCTAA
CTTGAGACGAATCACCACATTTGACTCAGTAGAAGACTTTTGGAGCATTT
ACAATCACATTCAGTTGGCTAGTAAATTAAGTTTAGGTTGTGATTATTCA
TTATTCAAGATGGGTGAAACAATGGTTGAGACTGCAAGACCCGAAGAAAA
AACAGAAGAAGAACAGAAACACATGGATACGGCCAACAAAACTGGATCAC
AGACAAAAAATAAATACCAATTATAGAAAAATGTTCAAGGAAAGGCTGAC
ATTACCTGCTAAATTCCCAATTATGTACGAGCTTCTTTGTCTCATTGGTG
AAGCATTTGGTGAAGACTCAGATCAAGTTTGTGGTGCTGTTGTCAATATT
CGTGCAAAAGGAGATAAACTAGCAGTATGGACACAATTTGCAGATAAATC
TGAATCAGTTTTACACATAGGGAAGGAGTGCAGCCTATGTGGGAAGACGA
CAGAAACAGAATGGGTGGTAGATGGCTGGTCAATATGAGCAAAGCACAAA
GAAATTCTGATTTGGACAGAGTTTGGCTGGAAACGAGTACGATAGCAAAA
GAATTGATGGTGAAACACCCTTTACAAAATCGCTGGTCGCTGTGGTTCTT
TAAAAACGACAAATCAAAGAATTGGGCAGCTAACTTGAGACGAATCACCA
CATTTGACTCAGTAGAAGACTTTTGGAGCATTTACAATCACATTCAGTTG
GCTAGTAAATTAAGTTTAGGTTGTGATTATTCATTATTCAAGATGGGTGA
AACAATGGTTGAGACTGCAAGACCCGAAGAAAAAACAGAAGAAGAACAGA
AACACATGGATACGGCCAACAAAACTGGATCACAGACAAAAAATAAATAC
CAATTATAGAAAAATGTTCAAGGAAAGGCTGACATTACCTGCTAAATTCC
CAATTATGTACGAGCTTCTTTGTCTCATTGGTGAAGCATTTGGTGAAGAC
TCAGATCAAGTTTGTGGTGCTGTTGTCAATATTCGTGCAAAAGGAGATAA
ACTAGCAGTATGGACACAATTTGCAGATAAATCTGAATCAGTTTTACACA
TAGGGAAGGAGTGCAGCCTATGTGGGAAGACGACAGAAACAGAATGGGTG
GTAGATGGCTGGTCAATATGAGCAAAGCACAAAGAAATTCTGATTTGGAC
AGAGTTTGGCTGGAAACGAGTACGATAGCAAAAGAATTGATGGTGAAACA
CCCTTTACAAAATCGCTGGTCGCTGTGGTTCTTTAAAAACGACAAATCAA
AGAATTGGGCAGCTAACTTGAGACGAATCACCACATTTGACTCAGTAGAA
GACTTTTGGAGCATTTACAATCACATTCAGTTGGCTAGTAAATTAAGTTT
AGGTTGTGATTATTCATTATTCAAGATGGGTGAAACAATGGTTGAGACTG
CAAGACCCGAAGAAAAAACAGAAGAAGAACAGAAACACATGGATACGGCC
AACAAAACTGGATCACAGACAAAAAATAAATACCAATTATAGAAAAATGT
TCAAGGAAAGGCTGACATTACCTGCTAAATTCCCAATTATGTACGAGCTT
CTTTGTCTCATTGGTGAAGCATTTGGTGAAGACTCAGATCAAGTTTGTGG
TGCTGTTGTCAATATTCGTGCAAAAGGAGATAAACTAGCAGTATGGACAC
AATTTGCAGATAAATCTGAATCAGTTTTACACATAGGGAAGGAGTGCAGC
CTATGTGGGAAGACGACAGAAACAGAATGGGTGGTAGATGGCTGGTCAAT
ATGAGCAAAGCACAAAGAAATTCTGATTTGGACAGAGTTTGGCTGGAAAC
GAGTACGATAGCAAAAGAATTGATGGTGAAACACCCTTTACAAAATCGCT
GGTCGCTGTGGTTCTTTAAAAACGACAAATCAAAGAATTGGGCAGCTAAC
TTGAGACGAATCACCACATTTGACTCAGTAGAAGACTTTTGGAGCATTTA
CAATCACATTCAGTTGGCTAGTAAATTAAGTTTAGGTTGTGATTATTCAT
TATTCAAGATGGGTGAAACAATGGTTGAGACTGCAAGACCCGAAGAAAAA
ACAGAAGAAGAACAGAAACACATGGATACGGCCAACAAAACTGGATCACA
GACAAAAAATAAATACCAATTATAGAAAAATGTTCAAGGAAAGGCTGACA
TTACCTGCTAAATTCCCAATTATGTACGAGCTTCTTTGTCTCATTGGTGA
AGCATTTGGTGAAGACTCAGATCAAGTTTGTGGTGCTGTTGTCAATATTC
GTGCAAAAGGAGATAAACTAGCAGTATGGACACAATTTGCAGATAAATCT
GAATCAGTTTTACACATAGGGAAGGAGTGCAGCCTATGTGGGAAGACGAC
AGAAACAGAATGGGTGGTAGATGGCTGGTCAATATGAGCAAAGCACAAAG
AAATTCTGATTTGGACAGAGTTTGGCTGGAAACGAGTACGATAGCAAAAG
AATTGATGGTGAAACACCCTTTACAAAATCGCTGGTCGCTGTGGTTCTTT
AAAAACGACAAATCAAAGAATTGGGCAGCTAACTTGAGACGAATCACCAC
ATTTGACTCAGTAGAAGACTTTTGGAGCATTTACAATCACATTCAGTTGG
CTAGTAAATTAAGTTTAGGTTGTGATTATTCATTATTCAAGATGGGTGAA
ACAATGGTTGAGACTGCAAGACCCGAAGAAAAAACAGAAGAAGAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004813XLOC_004813Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008605-proteinTCONS_00008605-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008605-exon-sc0000086-1575043694:218372..218425TCONS_00008605-exon-sc0000086-1575043694:218372..218425Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1575043694:217974..218214TCONS_00008605-exon-sc0000086-1575043694:217974..218214Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1575043694:208930..209136TCONS_00008605-exon-sc0000086-1575043694:208930..209136Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1575043694:208357..208470TCONS_00008605-exon-sc0000086-1575043694:208357..208470Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1575043694:207800..207939TCONS_00008605-exon-sc0000086-1575043694:207800..207939Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1575043694:206930..206984TCONS_00008605-exon-sc0000086-1575043694:206930..206984Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1575043694:204200..206513TCONS_00008605-exon-sc0000086-1575043694:204200..206513Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1510915933:218372..218425TCONS_00008605-exon-sc0000086-1510915933:218372..218425Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1510915933:217974..218214TCONS_00008605-exon-sc0000086-1510915933:217974..218214Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1510915933:208930..209136TCONS_00008605-exon-sc0000086-1510915933:208930..209136Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1510915933:208357..208470TCONS_00008605-exon-sc0000086-1510915933:208357..208470Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1510915933:207800..207939TCONS_00008605-exon-sc0000086-1510915933:207800..207939Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1510915933:206930..206984TCONS_00008605-exon-sc0000086-1510915933:206930..206984Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1510915933:204200..206513TCONS_00008605-exon-sc0000086-1510915933:204200..206513Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1491911889:218372..218425TCONS_00008605-exon-sc0000086-1491911889:218372..218425Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1491911889:217974..218214TCONS_00008605-exon-sc0000086-1491911889:217974..218214Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1491911889:208930..209136TCONS_00008605-exon-sc0000086-1491911889:208930..209136Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1491911889:208357..208470TCONS_00008605-exon-sc0000086-1491911889:208357..208470Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1491911889:207800..207939TCONS_00008605-exon-sc0000086-1491911889:207800..207939Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1491911889:206930..206984TCONS_00008605-exon-sc0000086-1491911889:206930..206984Clytia hemisphaericaexon
TCONS_00008605-exon-sc0000086-1491911889:204200..206513TCONS_00008605-exon-sc0000086-1491911889:204200..206513Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:204200..218425 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.6439	40.6191	17.2795	15.5573	48.7434	37.3415	62.8886	69.1763	44.1716	46.9364	33.8029	29.0974	28.6628	26.52	28.5087	28.7347	42.0166	37.9308	12.7945	21.5594	35.1238	35.7398	57.0274	58.8343	35.3536	45.2369	41.9279	28.4546	58.8181	53.7026
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001040TIF_eIF_4E
IPR023398TIF_eIF4e-like
IPR019770TIF_eIF_4E_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003743 translation initiation factor activity
Blast
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BLAST of TCONS_00008605 vs. Swiss-Prot (Human)
Match: IF4E (Eukaryotic translation initiation factor 4E OS=Homo sapiens GN=EIF4E PE=1 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 1.051e-85
Identity = 123/190 (64.74%), Postives = 153/190 (80.53%), Query Frame = 2 
Query:  293 QSTIAKELMVKHPLQNRWSLWFFKNDKSKNWAANLRRITTFDSVEDFWSIYNHIQLASKLSLGCDYSLFKEGVQPMWEDDRNRMGGRWLVNMSKAQRNSDLDRVWLETLLCLIGEAFGEDSDQVCGAVVNIRAKGDKLAVWTQFADKSESVLHIGKMFKERLTLPAKFPIMYEKHMDTANKTGSQTKNKY 862
            Q     E  +KHPLQNRW+LWFFKNDKSK W ANLR I+ FD+VEDFW++YNHIQL+S L  GCDYSLFK+G++PMWED++N+ GGRWL+ ++K QR SDLDR WLETLLCLIGE+F + SD VCGAVVN+RAKGDK+A+WT   +  E+V HIG+++KERL LP K  I Y+ H DTA K+GS TKN++
Sbjct:   26 QEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRF 215
The following BLAST results are available for this feature:
BLAST of TCONS_00008605 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF4E1.051e-8564.74Eukaryotic translation initiation factor 4E OS=Hom... [more]
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