|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008594 ID=TCONS_00008594|Name=TCONS_00008594|organism=Clytia hemisphaerica|type=transcript|length=2441bp
CGATCGACGGAAAAGATAGTGGCGGTAGAGCTTGGTAAAAACAGTGTGAA
CACCTCCGAGACTGTTTACCCCGCCCTGGACTAGCCTctgctttcaatat
tatcaccTTCCTAAATTATTACTTTTTAGTGACTTTGTGTAGAcgataaa
tttatattttaggaAATCCCGCAGAAGAAAAGAGCATAaaatccttaaat
tttatttttagaatttgcaCAGCTTTCAGATGTCTCAGAtgaagaaaatc
aatattttactTACTTCTGCCAAGGTGACATCCTTCCACGGTGATTTCAG
AAGTCCAAGAAAGTATGCCATGATCTTTTTCCACGTGGAGCATGCAACTT
TCGTTCGGACATCCTGAAGATCAATATGACGCAAGCCAACACCATTCCGA
AGAGAAGTACCGATAAAGAATTGTATGGCTTCATCACAATGTaaatGGTT
GAACAACTGCTACCAGCAAATGTCAAGTTGACATCAGAGAAAGATCTTCC
CAAGCAAATCATCAAAGGGAACCATTTCATGCTCGAAACACAATTACAAC
GTCAAAAAGTATTGCgaagattttgcaaaaaatatcaaGTCCCTTACGAA
AACTTGGAATATAATCGTAACTTTCTGTATAGTGACGCGAAAAAGTTCAT
TTATTGTCGAATCCCTAAAGTGGCTTGTAAAACGTGGAAAAAGATTCTTG
GTTACGTCCAAGGGCGTTTTGATTCCCCATACAATGTCTCGCTTTTCGAG
ctTTACTCTTTCAAATATCCTTACTTGGCAACGCTTATCAACAAAGGCGA
CAGTGACGGCGTCGAGGAACGAAAAGACGGATATTTCTCATTCATGTTTT
CACGCCATCCTTTTGATCGACTTTTCTCAGCATATCGAAATAAAATACAA
AGCcctttagaaggtttagaaaaTTATCTACTGAAACTTGGTCCACGTAT
TATGACACTGAATGGGAAAGATCCGGCAACGCATGCTAAGAAAATGATCA
ATGGTACTGATTATTTAGACGTCAGTTTTGAGGAGTTTGTGACGTACGTC
TTAAAGGCTAGATTATTGGACCCACACTGGGACCACCAAGTCAAGATTTG
CCATCTTTGTAATTATCCTTTTGCCTACCTTGGTAAATTTGAAACTATGG
CTACAGACGCGAATAAGTTGTTCGATATGTTGGATATTCAAATTGATAAA
TTACCAGAGGATGGGCAATATAATACAGAATCACATCAATTTATGAAAGA
CCATTATGCGAAACTACCGAAAGCTTTGATTGAAGAAGTTTATGAGTTCT
ATAAAGatgattttttggcttttggttatgataaaaatgaatattttact
ATGTAAATGTGTAGAATATCAAATGCTTCTTTTTGTCACAGCACACTACA
GGCCTACACgttgtttttaaaagaacatccaaaacttttgaagccttggg
atgctcttaatatttttgagttttaagcataaaaatgttcttaacatggg
cttatttttcccattttgtgggtattttagtccattttcctaagaaatcg
ggtgttttagagtccgcaaagccttaaaatgttcttaacctgttctcgca
acatttcggccatcgaagagTTATGTTCTTAATATAGtctgtttttataa
aaagaaaaacgtgcaAAAGCATTACTGTGAGTATGACATTGAAGAATATG
TATTAAGTAAAGATGTGTTTCGAAAAAGATaaactttgtaaataaaaaat
accatatctatgaaaaaaatagaatatATATCCTTTTTTGTCAATAATAA
TTTGGTAGTGTAATATTTTATACGACAGAAAAACTATTATAATATATATG
CtgtatttaaaaagaaatgattGACTGTGTGAAGCCAATTGGCGATTTGT
ATACATTTGGGCGTCACTAACCGCCCTCATTGAAGTAAACTAGAACTAGG
CAGTGGTGGATAAAACGGCGAAATTAAAGAGACCGATCGGTTTGTTGACC
CTTATATTACATTTTGCAAATTCTGTAAACACATTGCAGCATCACCATCA
CCAAATTTAATAATATCCATTCCCTTGTCCGAGGATTTGCTAAATGTATC
TAATATTTTGTGACACCAAAGTTTTTATTTGGAATGTTTTCCAGTGAAAT
TGGGTTGTGGTGTTCCATCTAAAATTCATACAGGGGATAAATGAACCTAT
CTTAGCAAAAATGAAATCTTGAAATTGTGTGGATGTCCCATACgggaaaa
tgacaaaatttgtaaaaaaacacTTCAAAAAATAAGGTTTCTCCTTTCct
tcagaaaaattatttttattttgcagTGTAAAAAATCTTTGGACACAATA
AGAAGGGATGACAAATTTATCTTCCTTAAATTAAATTCACTTCAATGTCG
ATTCAAggaaacttcagccccccccccccaatatggaaaCA Run BLAST on NCBI transcript from alignment at sc0000086:84036..99269- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008594 ID=TCONS_00008594|Name=TCONS_00008594|organism=Clytia hemisphaerica|type=transcript|length=15234bp|location=Sequence derived from alignment at sc0000086:84036..99269- (Clytia hemisphaerica)
CGATCGACGGAAAAGATAGTGGCGGTAGAGCTTGGTAAAAACAGTGTGAA
CACCTCCGAGACTGTTTACCCCGCCCTGGACTAGCCTCTGCTTTCAATAT
TATCACCTTCCTAAATTATTACTTTTTAGTGACTTTGTGTAGACGATAAA
TTTATATTTTAGGAAATCCCGCAGAAGAAAAGAGCATAAAATCCTTAAAT
TTTATTTTTAGAATTTGCACAGCTTTCAGATGTCTCAGATGAAGAAAATC
AATATTTTACTTACTTCTGCCAAGGTGACATCCTTCCACGGTGATTTCAG
AAGTCCAAGAAAGTATGCCATGATCTTTTTCCACGTGGAGCATGCAACTT
TCGGTATATGACAATACATGATCTTTTGTTTTCGACTATACATCAAGTTG
GCATCATATTTCCGAGTGTAATGAATATTTTGATGTGTAGCGCAGAATTT
TTGTAACTGGTCGTGACGTGTTTGTTGTGTTTCAGATGTATATTTTGTGC
TTGGTCCTTCTTCAGTAGGCTAAGGAATTAAGACAAAAATCTAGAATGAA
TGTTATGAAAATCATAAAATTGAGCTTCAATATCCTTTCTGGTAAGGATC
GACATGATTAATCGTGCATTAATTATTTTCATTAAATTAATGAAAATAAT
ACACCACCTATTGACTTTGACAGATTACAATAGAAGGGTTTAGTCTTCAA
TATCGAAGGTTTAGTTTTCAATTAAGACAGTTCGTTTGTAGCTTCACTCT
AGAAGATTGGTACACTTTTTACCTTGATTCTCGTCAATGTTAGGAAAGAG
AATATATCTAAAAGAGATAAAAAAAGCTAAAATATGATGGGTGCATAAGG
GTTCACATGCTTTTTGTTAAGCAACATAATTTCTGCAGAATTATCGAAGC
AAACGTTCGAATCTGTAGAGGCGGTTCTATGTACTAACCTAAGTACCGTA
GTACAGTGGTAGAGCATCCGGCTACGGTTCGCAAGGTTGTGGGTTCAACC
CCCAGCCGGGTCATACCAAAGATTCCCAAAATGGTACTTGANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGAGAAAGAGTGGCGCCCTCCCCTACCTT
CGGGTAGATAGCTATCGAAAGAGGAGCCTTCGGGTCGCCTCCGACTGTGG
TCGCAGACTTACTTACTACTAAACTAAAGATGAAAATCCCCGTTTCCCAG
AATGAAAAAGCTTTATATTGATCTTATAAATCAATACCTATTATCTGCAA
TGTTTTGAAAATAGTTTTTAGACTGTCTTTAATGCGGGATGGGAAATGGA
AAGGGTGGGAATGGAAAAGTGGGCAAGCACCAAAATTTGATAGAAATTAA
AAAACATTAAAAAAATTGATAACATATTGGCACATTGAAGACGATTTGTG
CCGAACCGATAACTTGATTATCAAATAAATATTAATAAATTGTAAAAGAA
TAATCTGTCATTTTCATTGACTATATTTCCCCGAAGTAAACACCGGGTAG
GAAAGAGGTATGTTTTAATGTTACATATATAAAATGTATCATTTCAATTT
TTGAAAAAAGCGTAAGTAGCTACTCTTGTCTCCCGAATAGACGGGAGGTC
CAAATAAGCAGGGGGTAGGAACATTTTCTAAATTCTAATAAGCTGGGGGA
TGAAATAAGAGGGGGGGGGGGGGATTTGAAGACAGAATTCTTTTAACTTA
TATCAATTTTAACAACAAAAAAGAAACTTTAACAAATGAACACGTAAAAT
AAGAACCAATACTAACGAAAAGGAAAATTTTAACAAGTTTATGGTCTATC
TACACTGTAATAAAATATTGAATTATTCGAATTTAATTAGAGGGGGGTCT
TAATAAGAGCAGGGGGATGGATTTTTTTTCTCTTAACAATTAGTGGGGGG
ACGTCTATCCGGGAGACAAGAGTAGTAGATCAAAAATTGAAAATTTAGAG
ATAGAACGGTGTAGCCTCTTTTTATGAACCAGTAGCAGATTTTGGCTTTA
GCCTTTTTATGGTCTCGAGAATTTAAGCATAGATATGTTTATGCTAATTA
CACTAAAAGGACTCAGGGTCAGTTGAAAAAGTCAACTAATTTATGAAGTC
AGAATGTTATTTCACTTTGAAGATTTGCAAACTTGAACCTTAATCTTACG
AAAACTGTTCTTATAAAAAAGAAACGATTTTTCTCTCACCTTTTAGTTCG
GACATCCTGAAGATCAATATGACGCAAGCCAACACCATTCCGAAGAGAAG
TACCGATAAAGAATTGTATGGCTTCATCACAATGTGTGAGTTTACTTTCA
ATGTTTTCTACAAATAAACCGTAGTCACGCGGTCAGGCGTGTGCCGCTTT
ATTAATTAATTACCCGCCTAAACTTGATCTAATTCTTTTTTTACACCTTT
TTGTATTGTCTATAGGTGCGAAAAAAAGATTGGGACGGTTTTAGGTTGGT
AAAACGGACAAAAAATAGCTGCGCGGCAATTGGCAACTACGGTCAAAAAA
GTATATTCAATAATATCAAAATTCGCCGTCAACAAGAAACTACTCTAATA
CTTTTTCTTTACGCTCCCTTATTATTTGATGAGAATCCAACTCCCCTTTG
AAAATCGAATTAGAGAGCGTCAACATCTGTATCTAGGTTCGCATGTCTTA
CTATGTATTTATACTACTAAACTTGAGTGAGTGCTAAACTTGAACAAAAA
ACCTTGTGTATGTTGTTTGGCGATAGACTAGATTTATCACCGATAATTCT
ATGCGTTGAAAGTATCAAATGAACAAATGCGTGGCATTTTATCTTACATT
TTATTTCAAAACAAAAATGGTTGTTGTTTTTCTCTGATCAATTAAGAGCA
TACCATTAACCACTTTAATTTGATACTCATTAAAACTACTTCCTATTTAG
ACGCATGAGAAAGAAAATTGCATTTTTGGAAGAATGAATACATTTGCTAA
AAGGGTTGTAAATGAAAAAAGTAACTTTTTGAAAAGATTGCCTCTAAGAC
ACCCCTGTCTCACAGCCCTGGTAGAATTTTTTCCTTAGTGGGGATAAAAA
TTCCTATTGAAGACCCAATGGGGATAGAAATTCCATTATTCCAAGGTTAA
AAGATCCAGTGGGATGGTTTTGGAGTGTAATTCATATTTTTTACTATAGT
ATAACTGTTTTTCTTGACCAAAATGACCTTATCACCTTCAATGCTCCATA
TAAAATGTTAATTTTTAAACATTGAATTTCGAATGGGGATGATATCGAAG
TCAACTTCCCAGTGGAGCTGAAATTCTAAGTGTTTTTTCCAACCGGGGCG
AAATTTTTATGACACAGGGGTGTTCTAAAAGGTTAAACAATTTCCGAAAA
TCAAAGAAAACATTTCAAATGTGTGTATCTAAGCCTTAGGTTTAGTTTAA
TCTCAATAAAATTTGGTCTTTGTAAGGGTTGGTTTTGGGAGGTCCCGTCC
GCACATTACCGTCATCTGCCACCCTTAGAACGGGGATGGGTTGACAGTTA
TGTTTATATAGAAGTACCATTACCGTAAAATATCACCTGCTGGCTTTCTT
CGCAAAACATAATGTGAATAAAAATACATTAACTTTTTTACACGTTAATT
GTCGGCAACAAACAAACAGGTTTATAATACTCAACAATTTAATGGTTACA
GTGAACGTGGATTTTTAACATACGAGTTGCGAGTTGGTCCTACGAGTTGC
GAGTTGCTATCAAATATGCGAGTTGCGAGTTGGTTTTTGCGAGTTACGAG
TTACGAGTTGCTATTTTAACCAAATAAAAGTGCGAGTTGCGAGTTGAAAA
TTTCACGTTAAGACATCAATATCGCGAGTTGCAGATTAAAATCGCGAGTT
GCAAATTTAAATCGCGAGTTGAAAAATCAAAAGTGCGAGTTGCGAAGTAA
GATCGCGAGTTGAAAAATTAAAAGTGCGAGTTGCAAATTAAAATCGCAAG
TTGCAAATTAAAATCGCGAGTTGAAAAATCAAAAGTGCGAGTTGCAAATT
AAAATCACGAGTTGCAAATTTTAAAGTGCGAGTTGCACGCTTGTTCAACC
AGTGTGGAGCAATTTTGTCGTTAGGTGACATGTCTAGGTTCAAAAATGGA
GAAAAAGTTTTGTATCGAAAGATTAAAAGCTGATATATAAAAAGTATTTA
AACTGTGAAACTCGTGTAATTCGAATCTTAAAATTTCCTTAGTAGGTGGT
AAAATAAATATTTACGATAGAATTGCTGTTTTCGCTCGGGAAAACAACAA
GAAAATCCTAGATTGAAAATAATAAATTATACTCGTTCATTTGTGAACAT
TGGCTCGATAGCACTCATTTGTTCTGTCATGTCCTTGCGCTACTTTGAGA
ATCTCGACACTTTTATCGCAACAGTGGAACTGCACACTGCGATCTGCTGA
CCTCAATCCCGCCTCACCGATCTACTGGGCCCTTGCGACGCAAGTTTTAT
TTCGAACGAACGAGGCTGCCCTTTCGAGGCGCCTCACCTTTAGCATTGTA
TTACACACCGACCGACTACACTTATATAATAAGATTAACACCATGTTATC
CGGACACTTTTGATTGAATAATCGCTTATAGTTTTTCGAATAGACCCAAA
TGTGGAGCAATCCATAGTAAATTTACTAGCAAGAGAAAATAGAGAATTTC
TACCCTTAAACTGTTTAATGGGAAGATCTACTTATAGGAGCATTTAAAAT
AGAGGCTCAGAAATCCCGAGTTATTTTTCTCGAGCTAAAAAACCGAATTA
CGAAAAAACCGAGTTATTTCTGCTTTTTTAACTCGAATATTTTTCCTTTC
TTTAAATTTTCGAGTTATTTCTCGATTTTTAACTCGGTTTTTTTTTCGGT
CTTTTAAATTTTCGAGTTATTTTCCTTCCTGTAGATTATCGAGTTATTTT
TGCGTTGTTTTAAATTTTCGAGTTATTTCGTGTTTTAAATCGATTTTTTT
TCCTTCTTTAACATGCTCGAGTTATTTTTCGGTCGATTCGTTATTTCGAA
ACTCAAAAATAATCAATAGAAATAGATCCCCAATTCAATGCATGAATACA
TGTAGGATATTTTATTAAGCTATAAATATCTACCCTGAGTATCAGAGGCT
AAGTTTTCAAAGAAAATAGTAACCTCTGAAGACAATTAATAGAAATTTTA
TCGCGCATGTGTCAATCTAATCACTGTAGAAAAAATCAAAGATGAAGAGC
AAATATTACCATATTAATGTCTAGCAGACTGTATCAGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCAGTA
TGCAGTTTACTATTTACGAATTCCCCAGAAACCTCCAAGTGTAGTTGAAA
TGAGTTTATTTCGAAAGAAATCTTTTACATGATCCCCAAGTGTATAACAG
TAATTACTAAACTTTTAATTGAATTGAAATAATAGACAGACTTTATGTTA
TGATTCTCTATCACTGACTCTTTTTACAAAGCATTGATGACTTTTTGTAA
GTTGTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
ATGGTTACTTTTATCTTCGCTGATTGCGCGATGAATAGAATCTCGATTCG
TCGGCACAGCGTAAATATATGATTTTGAGCTGTGCTTTTCACGGTAATAA
ATATCTATAAGGGCCGTCACTTTTCACTTATATAAAATAATCTTGCTTGT
GAAAATTGACGTTACGCACAAAAAAGCTTGCAGAGAATTTGATAGTGTCG
ATGGAAGAAAGAAAATTCAATAAAGAAATCCATTTAGCGAGCTGTTTGTT
TTCGCAATCCCGCCGACGGGATATGTTTTCTACTCATTTTCTTTCGGGCA
TTTTTCATCTCCAAATTAAATAAAAACTTACTAGTTATCCTTGGGAGGTT
TTGCTGTCGAAAAATGAATCACCATTGATGAAAATAAGTTTTTATAAATA
AAGGCTCCCTTCGAAAACTGAATTTCGAAGGCAGGAAAAGTCTACTGTGT
GTGAAAACTGAAGTAAACCAAGCATTACATAGATAGATACTTCTTTAATC
AAATCTAAATTTATAAAATTTTATAATATTACTTCATTCTCAAAGTTTTT
TTTATATTTCTGCAAAATAAAGACAACAATCAAACTGCAAAAATGCGAAA
TTCATGTAACTAAGAAAGTACGAAAACAGAATTTCATTTCAACTCTCGAT
TTTAATTTTCAACTCGCACTTTTGATTTTTCAACTCGCACTTTTGATTTT
TCAACTCGCGATTTCAATTTGCAACTCGCGATTTTAATTTTCAACTCGCA
CTTTTGATTTTTCAACTCGCGATTTTAATTTGCAACTCGCGATTTTAATT
TGCAACTCGCGATTTTGATGTCTTAACGTGATATTTTCATCTCGCAACTC
GCTCTTTTATTTACTTAAAATAGCAACTCGTAACTCGTAACTCGCAACTT
GCAACTCGCAACTCGCATATTTGATAGCAACTCGCATCTCGCAGGACCAA
CTCGCAACTCGCATATTATCAATACACTCTTCTCGAGATGCATAAATTTA
TTGTTGTCCTCGTTTTCAAAAAGATTTCATTGCTATAAAATTACATATTT
ACAATGATAATTGTGTTGTTTACATCTCATGAGACATTTTGAATTTCAAG
TACTTTTGTTTTAGAGTTAATGTTTGCCTTTTGGGAATTTAAATTGGTTT
AAATGTATAACTTCATAGCATTGAAATCTGTTTGAAAACGAGGACAACAA
TAAATTTATGCATCTCGAGAAGAGTGTATTCACCAGTGAACCAGAAGCAC
AATAAACTTAAAATCAAAAAATCAATTGTGTTGTGAAATAAAACATTTTT
ATGAAGATCTCTTTCAACTAAGTAAAAACACTTTAATGATCGCATTATAT
TAAATGGCATTTATACTGAACAAATTTTTGACAAACACACACATAAAACT
TTCTACTTGTAGTCGTGTTCTGACACGGGATTTTTTTTCGAGACACCCCG
GTTTTGTAAAAGATTACAAGATGAAGAAAATCATAAAATCATTTGCGTTA
CAACTGTATGGAGAGCTAGCCCTGAAACCCGGTAAAAAAAACCATTTACT
GAGGGTAACTTTTTATTTTGATGATGGTGATAGCTTCACCAACTGATTTG
GTCGCCTGGAGGGACCCTAGTCTGCAGTTTTCTGTGGTCCTGATTTGATT
GGTTTAGATGGATCGAGAACGCTATCATTTTTACACGAAATAATTTTTGA
GAATTCTATAAATCAAGTCGAAAGATAAGAATGTTTCAAAGATGAAAGGA
TGAGCATTTTTTCAACAAAAAGTTTATCGCAACGCTATGAGAAGGGACGT
GTACTCCCGCCAACAGTATAGCAGGAAAGAGACAGAGATATTTTGGCTAG
ATTCATGGAAACATAAACTTTGAATGGAAATTTCTTTAATTTTCTCAAAA
CACTAGGTTTACAGTGACCGTTAAAGCTAAAGAACGTTCAAGTTATTGAG
ACGCTGCTCTACTACAATGGTACTTAGCCTGTCCTTTCCTATGAAAAAAG
CATTTTGGGGTATAGTAAAATCATGCATTCACTTTAAGGCATAAACGTTT
TTTTATAAAAACAAACTATATAAGAACATAAGGCTTCACTGGCCAAAATA
TCAAAAACAAAAACACCCTTTTTAGGAATGGTCGAAAATATTCACAAAAT
GGTAAAAAGAACATGTTAAGAACATTTTTAGGCTTTAAGAACACCGAAGG
TTTCAAAAATTTTGGATGTTCTTATAAAAAAACGTGTAAACATCTTCGGG
ATTCGAATTGCTGGCGATAATCTTTATAAAACAGATCATAGACGGTATCT
CAGGAAGTGGGTTTAGAATTATGACATCAATTGTAACATGTTGTTATGTC
GTATTTACATTGTCAGTTTCTTTGAATTCGGCATTCTTTATTTTTGACGT
AACCAGCTTTGTTAAAGGAAGATTTTTGATTCTGAAAAGCATCAACGTGG
GAGTACCATTGTATTCTCTTTAAGGTTTAATTACAGAAAATTGATCTCCA
CCGCGGTGATTTTTGCATTTTTTTTATACACTTTCTCTATTTGATGAAAA
AACTATTAATTGATTAAATGATTGAAGAACTTTACGATACTGCACGTTTT
TTTTATAAGAACATCCAAAGTTTTTTAAGCCTTCGGATGTTCTTAACTTT
TTGAGTTTTAAGCCACAACATTCCTAACACTTTGACCATTTTGGAGATAT
TTTTACCATTTTCCAAAGAAATAGGGTGTTTTTGAGTCTACAAAGCCTCA
AAATGTTCTTAACTTGTCGTTTACATTTTGGTCAACAAAGCCTCATGTTA
TAAGCCTTATATATAGTTTGTTCTTATAAAAAAATGTGTATCACCAATGT
CGCCAGGACATGATTACATACATATGCAAAAAGTATTCTGCCGCTAGATT
TGATATAATTTTGATTCAATTAATGATTTAAAACAGTTTATGGTGTGTGT
TGATGAAGCGTAGCATCAACCTCTGGTAAAATTGGCAATAAATAGAATAT
TGTTGCAAGATCGAAAGATTGATCGAACAAGAGAAACTCTTTCACAAACC
TTAATTAATAATAGCAATTCTCTTATTGAATGAAGGCAATTTAGTATACT
TGTAGTGGTTTTAGGTAGTGTATTTGGATAATGTTTGCCACTACGTTTCA
ATGGAAATCTAAATACCACGTGCTTTTATCATCGTTTGTTTTGGTTCTTC
TGATGTTTTTACTTTTCAAAAGATATGAATACGAACAGAAAGGTTTGTTC
CTAATTATACCCCTGTGTCACAGAGCGGTGGGAGCCCAGCCCCACTGGAA
GTATTGACAAAGATTTCATCTCCGGTGGGAAAATACCTTAGAGTTCCAGC
TCCACTTGGAAATTGACTTTGATTTTATACCCATCTTGAAATTCTATGTT
TAAAAATTGCACCTCAAAACCGTTGCTACTGAATTTTTTAACCTTGGAAC
AATAAAATTTATATTCCCATTGGAATTTTTATCCCGACTAAGGAATAGAG
TTTCACCGGGACTGTGAGAGAGGGGTGTTTTATTATTGCGCTCTTTAGCG
AGGTTTAGACACCCCTGTCTCACTGCCCCGGTGGAATTTTATCCCAAAGT
CGAGAGAAATTCAAAAGATATCTTCATAGAAAAGCTTAAAGATCCGATTG
GGATGCGGGCTTGGAGCGCAATTTTTTATTCATTTCACATGTCTGTTACT
TCTCCAATTTATTTCAAAATTAAGATTTCAGTAATTTGGTGCCATAAATA
CAATTTAAAATTAATAGTTACTAGCCGGTACCCGGCGTCGCACGCCGGTT
TAGCTGTTTGCTGAACGCATTTTAAGTCCTTTGGATGTTGGGAAGGTGGC
TTAAACACCCCTTAAACACGATGAAATCAAAATTAAAGGGAAGAATTCTC
TTCAAACTTTGACTCTATCCCTCCCGGGTGACGTATCTTTTAACCATATT
TTGAAAAATATTTTTGTGGCAAAAATGATCAGAAAGCAGAAAGGGCGCCA
TTCCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTCATCTTTTAAAAGAACAAAACATT
GCTTGCGAAATCGAAAGTGACACACAGACAGAAAACAAAATGACATACGC
GTTATACTATTAATATATAGATAAAGTTTATATAATAGTTATTTAACTCA
AACCTGTGTATTTTCATTTCGAGCGACTTTGATCGACCCCATACCTATCA
CACTGACAGTATCCATAAAGTGAAAATTCTAAATATAAAATAGTTTGTAT
AAATCGACTTTGGCGTCCCTCTTTGTTGTTAGAATCTAAATACTCAAAAT
AATAATTTTGTTTTTTCTTTTATAGAAATGGTTGAACAACTGCTACCAGC
AAATGTCAAGGTAATAATCTCTTCAAAAGGAATGTTATCGCTTTGCACTG
AGACATTTTCTCTTCATTTTCTGATTGGTAACATTGGGGACATTCTATAT
TTGCAAATCTGGGGACATTCTTTATATGGCCCTTAGTATACTTTATCAGG
TTTTCTGAAAGAAAGAATTGCAATGATATAAATTTAGGCAATAATTATAT
GTAGATTTTAATGCTTTGAATTTAACAAACCTTATTTTTGGCCACATTGC
CGCTCTAAATTGAGTAACCCTAATCCCGCTCAGGAAGCCGGTCCAAGGTC
CTTTTTGACTAAGGAATTAATGAGTTAATGTTAATGATCAGTTATTCTTT
TGACTTCTGCTACCCGAAAGTGTAGAGAAGGGCGCCACTTTCTCTTTCTG
GATTTCTCTATATAGACTTGATCCGTCTCTTAGTTGATGAGTACCATTTT
TATGCCAAATAGTCTTTGGTATGACCAGGCATGGAATTGAATACAGGACC
TTATGTACCCTAGCTAAATACTCTTCCTTTTGCACTACTGCCAATTTGTA
TAGATATAATAATTTGAAGCCAATCATTTTTCTTATTAGTTGACATCAGA
GAAAGATCTTCCCAAGCAAATCATCAAAGGGAACCATTTCATGCTCGAAA
CACAATTACAACGTCAAAAAGTATTGCGAAGATTTTGCAAAAAATATCAA
GTCCCTTACGAAAACTTGGAATATAATCGTAACTTTCTGTATAGTGACGC
GAAAAAGTTCATTTATTGTCGAATCCCTAAAGTGGCTTGTAAAACGTGGA
AAAAGATTCTTGGTTACGTCCAAGGGCGTTTTGATTCCCCATACAATGTC
TCGCTTTTCGAGGTAAGCTTCTTGATCGATGATTTACTTAAAACTAACTC
AAATATTTCTAGATCTAGTGATCTAGCCATCAAAGTCCTACAATCCACAA
CATTTTCATTTAGTCCGTTTCAGGTTTGAAAATGTAAATCTTAATTTTGC
AGGGTATCTTGCTACGCCAATAGTATTGACGTTATCATAAAATTTCCCCA
AAAAGGGTTCACAACCTTTCGGGTGCGGGTTTTATGGTGTTTTTTAGACC
CTTGGTGAACTTCTGTGCTAAATTTTAGTCAAACTTATTTTGCGACAATT
CTACCAGACTTCTAATAAAATCGCTAGCGAATACGTAAGTTTTAAAAAGA
AATTGTCGTTGCACTCGAAATAATTTATGAAAAGGTCTATTTGATCAAGA
ATTTATTATAGACACTGGATAACCAACGAGCTATTTTCATTGATTTCTCA
TGTTCTGTAGCCTTATCCGCAGTAATGACATTATTGTTCACTCTCCTTCC
TTTATTAAACGATTTTTCGTAACATTTTAATCATTTTTTTCATCTTAACA
CAGTCATTTCAATTCCTAAATGAAAATTAAGTTTTCCTTAGAGAGGTGAA
CGCATCAAAATAATTGCTAATTACGTGTCGTTATGACGTTTCAAGTTGCA
AGAAAGATACGCAAAACATGCTATATATGGAAAATTGAATGTTGACACCA
GAAATTTTCAAAATTTAACCTCAATAAAACCACAGATCCACCACGAGCCT
CCAAAATATCTAAGGTTAAGCCAAGACACCTAAGCAGGCTCGGATACAGA
GGGAGGCTATAAATAACCAATGGAGGAGAGTGCACTTTATTATCGTATTA
CCTTATGTGGAAACTAATTACTCTCTATGAATAAGATAGCCTACCTCCTG
TATCCGACCCTGCTAAGTCTAATATATGTCGATCTTAGCTCTTCTCAGAA
AGATGCTAGAAAGATATCACCAACTTAAAATTCTGTGTCATTTTAGGCCC
TTTGTTTGATTTTTCTTGTCTGATGATGTTTTTGTCACAACAGATTAAAT
ACATGTATCCGTTAAGTATTTTAGCGTCCAAACTTTTAGCGAGTAAAAGT
ACAAAAAGATATAGATAGAAGACTTTTTAGAAATGAGATTATTAATCATT
TTTCAAAATCATAGAACTTCGAGCCGCCATGACAGTTGTCCTTTGCGGAC
AAAGCTAGATCCTCGATTGTTTTCATAAACAAAAGAAAGACAATGCTTCG
CTCTCCACCGTTTTATACGTTGTTTATCCAGTCTCTATGATAAATTCATG
ATATGATACAAAGAAAATAAATAGTTTTTTAACCATTATATTCTGACATG
GCTATAATAATAGATGATGACGTTTCCGTTTTTCTTTTCTTAGCTTTACT
CTTTCAAATATCCTTACTTGGCAACGCTTATCAACAAAGGCGACAGTGAC
GGCGTCGAGGAACGAAAAGACGGATATTTCTCATTCATGTTTTCACGCCA
TCCTTTTGATCGACTTTTCTCAGCATATCGAAATAAAATACAAAGCCCTT
TAGAAGGTTTAGAAAATTATCTACTGAAACTTGGTCCACGTATTATGACA
CTGAATGGGAAAGATCCGGCAACGCATGCTAAGAAAATGATCAATGGTAC
TGATTATTTAGACGTCAGTTTTGAGGAGTTTGTGACGTACGTCTTAAAGG
CTAGATTATTGGACCCACACTGGGACCACCAAGTCAAGATTTGCCATCTT
TGTAATTATCCTTTTGCCTACCTTGGTAAATTTGAAACTATGGCTACAGA
CGCGAATAAGTTGTTCGATATGTTGGATATTCAAATTGATAAATTACCAG
AGGATGGGCAATATAATACAGAATCACATCAATTTATGAAAGACCATTAT
GCGAAACTACCGAAAGCTTTGATTGAAGAAGTTTATGAGTTCTATAAAGA
TGATTTTTTGGCTTTTGGTTATGATAAAAATGAATATTTTACTATGTAAA
TGTGTAGAATATCAAATGCTTCTTTTTGTCACAGCACACTACAGGCCTAC
ACGTTGTTTTTAAAAGAACATCCAAAACTTTTGAAGCCTTGGGATGCTCT
TAATATTTTTGAGTTTTAAGCATAAAAATGTTCTTAACATGGGCTTATTT
TTCCCATTTTGTGGGTATTTTAGTCCATTTTCCTAAGAAATCGGGTGTTT
TAGAGTCCGCAAAGCCTTAAAATGTTCTTAACCTGTTCTCGCAACATTTC
GGCCATCGAAGAGTTATGTTCTTAATATAGTCTGTTTTTATAAAAAGAAA
AACGTGCAAAAGCATTACTGTGAGTATGACATTGAAGAATATGTATTAAG
TAAAGATGTGTTTCGAAAAAGATAAACTTTGTAAATAAAAAATACCATAT
CTATGAAAAAAATAGAATATATATCCTTTTTTGTCAATAATAATTTGGTA
GTGTAATATTTTATACGACAGAAAAACTATTATAATATATATGCTGTATT
TAAAAAGAAATGATTGACTGTGTGAAGCCAATTGGCGATTTGTATACATT
TGGGCGTCACTAACCGCCCTCATTGAAGTAAACTAGAACTAGGCAGTGGT
GGATAAAACGGCGAAATTAAAGAGACCGATCGGTTTGTTGACCCTTATAT
TACATTTTGCAAATTCTGTAAACACATTGCAGCATCACCATCACCAAATT
TAATAATATCCATTCCCTTGTCCGAGGATTTGCTAAATGTATCTAATATT
TTGTGACACCAAAGTTTTTATTTGGAATGTTTTCCAGTGAAATTGGGTTG
TGGTGTTCCATCTAAAATTCATACAGGGGATAAATGAACCTATCTTAGCA
AAAATGAAATCTTGAAATTGTGTGGATGTCCCATACGGGAAAATGACAAA
ATTTGTAAAAAAACACTTCAAAAAATAAGGTTTCTCCTTTCCTTCAGAAA
AATTATTTTTATTTTGCAGTGTAAAAAATCTTTGGACACAATAAGAAGGG
ATGACAAATTTATCTTCCTTAAATTAAATTCACTTCAATGTCGATTCAAG
GAAACTTCAGCCCCCCCCCCCCAATATGGAAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008594-exon-sc0000086-1575043694:98917..99269 | TCONS_00008594-exon-sc0000086-1575043694:98917..99269 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1575043694:96835..96923 | TCONS_00008594-exon-sc0000086-1575043694:96835..96923 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1575043694:87960..87994 | TCONS_00008594-exon-sc0000086-1575043694:87960..87994 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1575043694:87108..87380 | TCONS_00008594-exon-sc0000086-1575043694:87108..87380 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1575043694:84036..85726 | TCONS_00008594-exon-sc0000086-1575043694:84036..85726 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1510915933:98917..99269 | TCONS_00008594-exon-sc0000086-1510915933:98917..99269 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1510915933:96835..96923 | TCONS_00008594-exon-sc0000086-1510915933:96835..96923 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1510915933:87960..87994 | TCONS_00008594-exon-sc0000086-1510915933:87960..87994 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1510915933:87108..87380 | TCONS_00008594-exon-sc0000086-1510915933:87108..87380 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1510915933:84036..85726 | TCONS_00008594-exon-sc0000086-1510915933:84036..85726 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1491911889:98917..99269 | TCONS_00008594-exon-sc0000086-1491911889:98917..99269 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1491911889:96835..96923 | TCONS_00008594-exon-sc0000086-1491911889:96835..96923 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1491911889:87960..87994 | TCONS_00008594-exon-sc0000086-1491911889:87960..87994 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1491911889:87108..87380 | TCONS_00008594-exon-sc0000086-1491911889:87108..87380 | Clytia hemisphaerica | exon |
| TCONS_00008594-exon-sc0000086-1491911889:84036..85726 | TCONS_00008594-exon-sc0000086-1491911889:84036..85726 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086 | supercontig | sc0000086:84036..99269 - |
Blast
BLAST of TCONS_00008594 vs. Swiss-Prot (Human)
Match: CHST9 (Carbohydrate sulfotransferase 9 OS=Homo sapiens GN=CHST9 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.901e-26 Identity = 88/300 (29.33%), Postives = 144/300 (48.00%), Query Frame = 1
Query: 496 LPKQIIKGNHF--MLETQLQRQKVLRRFCKKYQVPYENLEYNRNFLY--------SDAKKFIYCRIPKVACKTWKKILGYVQGRFDSPYNVSLFELYSFKYPYLATLINKGDSDGVEERKDGYFSFMFSRHPFDRLFSAYRNKIQSPLEGLENYLLKLGPRIMTLNGKDPATHAKKMINGTDYLDVSFEEFVTYVLKARL---LDPHWDHQVKICHLCNYPFAYLGKFETMATDANKLFDMLDIQ--------IDKLPEDGQYNTE-SHQFMKDHYAKLPKALIEEVYEFYKDDFLAFGY 1329
L K ++K N + ETQ +R+ L+ FCKKY + ++++ L+ D K +YC +PK C WK+IL + G S YN+S ++ K+ ++ D G+ R + Y +F R P +RL SA+R+K + P Y G I + P + +ING+ V F+EF+ Y+L + +D HW+ K+C+ C + ++GKFET+ DAN M+ D+ D + N + Q++KD L + + +Y+FY D+L F Y
Sbjct: 158 LNKSLVKDNKWKKTEETQEKRRSFLQEFCKKYG----GVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSAYNISHNAVHYGKH---LKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHP---NSYYHPVFGKAI--IKKYRPNACEEALINGS---GVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPCLINYDFVGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKD----LTRTERQLIYDFYYLDYLMFNY 438
The following BLAST results are available for this feature:
|
