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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008592 ID=TCONS_00008592|Name=TCONS_00008592|organism=Clytia hemisphaerica|type=transcript|length=1321bp
NNGCGATTTCATTTCTTTGGGCAATGCTTGAAAGTGGTGTCATCACAGAT
GGTCATTTGAAAGAATCcttcaaagaaattcatactcaGATAATAGCTTG
CTTGGATGATCATAACGAAACTACACGTTTAGTGACCGTCAAGGTGATGT
TGAAACTTTTGCAAGTCTGTGGTCCTTCATTTGATGTTGAGCAGTTACAC
GTCATTTATCCGGAAGTTTTGAAACGTTTGGACGACAGTTCGGATGACAT
TCGTATCCTGGCTACTAAAGCTCTGGCTGCTTATTTCAAttCATTACCAT
CCAACTATGATCGTGAATTCTTCCAAGTCCATTTAGAATTCATCTATAAA
ACATTACTCATTCACATGGATGATTCTCATCAAAACGTCCAGGAAGCAGT
GTACACCTGTCTCAAAGAAGGTGTTCAAATACATGCTGGTTTATTGAAGA
ATAAAGTTGAAGATGTTAAGAATAAACACAGAACAAAAACgTATTGCGAG
GAACTGTCAAAACTTTGTGAATCACAATTACGCGAAGTTTAGAAGTTTGG
TGCTATAAGGTTTTCCAGattgagaaaatttttactgatgatgaatgaat
acaaaaaaaacatgtGGCTCAATTGCCCTCTTTCCTGGCAATAACAATCt
ccaaaagaaaatatcaagaagAGCCAAAGATCTTTATCACCATccaaaac
aaactatatgaaTTATATTCTAGTCCATTTTTTACCCGGGGGGACCTAGG
CAAGTGAAGAGTACAGGTATGTGCCgtccttaagggtgccttttttggaa
actggcagtccctgtaagggttggagaaatcagaaaatcaaatatcagtc
ccattaagggtcggaaaaagatgaaaatttcaattctttgtccctaaaaa
catcgaaatttgatcaaattagtcccaataaaataacaaaattttccgCT
TTTACCTCTTtttagtcccactaagggtgcgagggtcgaaagtcgggcgg
cacgcccccgtcagctcgcaacacTAGTACCCAAGGATTTTTTACTAGTT
ACTAGCCTTTTCTCCTGCAAAGCCAGTTACACTAATATGGCTTTTGGGTT
TTTAACGGCGCAAGTATAAGATATAATTATAATATTTTTGATTCtatgac
atgattaattaacttTTGAGATTGTATATATATTAGGTATTAAGCAGATT
TAGAGCtttatttattttcacttatttttcaataatgatATGTCTTTTAT
CTTAGCGTAAACGTTCTGGTAATTTACAGTTGTTTTTTATTGTCTTTGTC
CTATCCCCCCTCCATCTACAA Run BLAST on NCBI transcript from alignment at sc0000086:943189..958836+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008592 ID=TCONS_00008592|Name=TCONS_00008592|organism=Clytia hemisphaerica|type=transcript|length=15648bp|location=Sequence derived from alignment at sc0000086:943189..958836+ (Clytia hemisphaerica)
NNGCGATTTCATTTCTTTGGGCAATGCTTGAAAGTGGTGTCATCACAGAT
GGTCATTTGAAAGAATCcttcaaagaaattcatactcaGGTAATGATGAA
TCTATTTTAATCGTGAACTTTATTGTTGTATAGTtgttgatattcatgac
gtaatgttatacAGGAACACACATTAACCCGGGCGTTGGCCACTGGTTTT
attaccaaaattcaaaattagcgtTATTTCCTGGAGACTTTTTTCCTTct
gtttcaaaactattttttgttGCAAACTTTACTTTTATAAATTAtcgttg
ttctttttttttgccaacaaattgaaatttgaatggGGTGATATTTAATT
AATTACTAAGTAGAAAAGCTTTGTGAATCCCGCGAAGTTGAAGTGGACAA
AATCGTATTACACGGAATCTTTATAAGGAATCTTAACTTTCCTCCGAGCC
TGGAGCTCCTCatttttccagagaatttcagcctcaaagatCCTTATCGA
ACTCCTTAATACTTAGCTGCCAAGATTGGATTTGCTAAGTATGAAACTTA
CGTATAAGGATAACTTTGTAAGTAtaactttatataattttcTGAAACTC
TCtgtttcttaacttgtttttttattttcaacctgACCAGTTCCTTAAAA
ATTCCTTACTTTTTGGAGCCATTTTCAGCTTCAAGTTCCTTAtgaacgtg
ttccttataaaaaaagagtgatgtatgagaaaaaactttttaaatcataa
tatttttatttctttcgaaATCGAGAAACATGGGTAGAAAACTAGCAAAA
CTGATGATTCTATCTTTTGAATCAATAAATGAGATGAAagaaaaccaatc
aaaatattaaccaaaacaaaattttaattttactaGAAAcgccttgaaaa
aaaattgaaactaaaAATAAGGGATAAAGTTATCAAGCTTGGCTACCTGA
AATATTCTAAAATAAATGGCTACAATGATTGTGAAAATATTGCTTATAGC
TGTCGCATTGACGTTTACCGACTCAGAACAAATCGTTGGTATCTTTTCAA
AATGTGATAGAAATTTGAACAAGACAGATTTTCAAAGGAGAGCTGTTCTT
TATAATAATGTCATTACCGAAACATTCAATCTTGCCAAAGAACGTTATTC
AACATTGAAGGACTTTGAATATTCAAGTCTGGATGTTTGTCAAGATCGTG
AAATGTTGCTTCGTCTAACAACCTCCTTTGTATTGGATCATAAAGTGAAT
AAACCATTTAATGCATCAAGACATCgaaggaaaaataaaagtacAATCTG
GTTCTTCATCATTTACATGGATAAAGAAATGACTGGATTATTTTCAAAGT
TGATAACAGCAAGGCGATATTCATATGTGCTAAATTTAAACCCAAACTGT
AAATTAAGAGGTTTcctagacgaaaaaaaattttattctaaTCTATTTGA
CTCCTTAGAGCTAGAATCTAAAGTTTTTGCTAAGCACGTTGAAATCTTCA
ATTGGAAGCGTTTCGGGTTATTACTTTTAAAAGGATTAGAAAGAGACTCC
AGTGAATATTACTCTAAAATGCACCAAAGGTTCATTGGCACAATAAGCCA
ACAAGACCTTTCGGATGCTTGCTATTTTACAGACACTATTGACATTCTAA
ATTCCACCAACTTTACCAGGGCTGTTGACATTTTACATCGAGATTTATCG
TACAATGTTTTGGTGCTTTTTGGAAGCCCAAAAGATCAAATGAAGTTTGT
GCAAACTATCAACAAAAATCTTTATACAAATTTTATCTGGTTTACACATG
ACATACCAGAATCTGTGATAGATTCATCTTTCCCATTCAATGGAGGAGAT
GATGTTAATATTTTAAACTATCAAACCAATATACGTAAATTAATCATCAA
AAaccatgaaaaatttaaaaaccaaaTATCTCTATTTGAAAAACAATCAG
AACTAAATAGAACGGTGGTCGAAATAGCATTtgcaacttttgataaaatc
ttcgAGATGTTAGTGAGGAAGAAGGGAAAAGATCTTGGAGCTGGATAAAC
TATGCATTAAGATTTCCCTTTACAAATGCGTGCGTGGTCTTGATAAGAAA
GAGTAATATTGNTAAGATTTCCCTTTACAAATGCGTGCGTGGTCTTAATA
AGAAAGAGTAATATTGTCTATAGAAGGACAATAATTTTCTCTGACGCAGA
AGATTTGGTGGAAGATCTGAGAGATCCAATCGGCACGGCATTAATAGAAG
CTTCCATTGAAACTACATGCGAATCATATCAATGTTCTTCAGGCTGGGAA
GAAAGCAGAGGAAAACGTTTGAAACAATTCACGAAATGGAATTTCGAATA
TGGTTTCACTTGTAAACAATGTCAacgaaattttgtaaaattgaacAAAG
GGAATgatgaaaaatgtcaaaaatgtcctcgttattatctttccaacaaa
aaaCACGACAAATGTTTTGACCCATACCGTCAGGAATATCTTGTCAAAAG
CACCATCTATTTCACGGCTTTTGGATTAGCCGGTTTGAACCTTGCAATCT
GTGTGTTAACATTGATCATTTTTATCATATATCACAAAACACCTATTGTT
AAAAGCTCAGATTTTATACTGACTGTAATTCACTTGTTTACCTCAATCCT
GATCAATGCAGTTTTAGTGATATTACCACATACGAAACCAAGAAAATTCA
CCTGCTTCTTTGACACCATTGTAGCCGGGaatttatacacgtttttcatt
GCAATAGTCCTAATGAAGTCACATAAAATATTGACTGCTTTCAATTCAAT
GCACAAATTATCAACAAAAAGCAAACGAAACACGATTCTCCAGCAATGGT
TTACGATTTTCATTTTGACCATATCTTCAGTTGTTTTGACCATTGTTGCT
ATGGAAACGCAACCCGTTACCGTTCAATCTCGAAGaagaattttaaacaa
aatcatACATCTATCTTGTAGGAATGTGCTACCAAAAACTATTCAACTTG
GATTTGCAGGACTTTTACAAGTGGCTACATTTATTATAGCatacaaagga
agaaatttgccGGACATTTTCAATGAATCAATGTCTTTATTGTATGCGTC
TTTTGCGTCAAATATGTCTTTTGCagtaatgtttattttgctaagATTCA
AAAGTCAAGATCCACATTTCCAAGCATCAATCATGTGGCTTGCCATCTCG
TTGAATTCGAGTATTTACATCTTATTATGTTATGGCAAGAAACttttatt
gttctttttaaGAAGGAGAAAAACACCTTGGAATACATTCGACAAAAGAC
TTTCCAATCGAATATTAGGAATGTTCTTAAACCAAATGAGGAAGAAAGTA
GAAtgtaattttttcattgcggAGATGGTTTTTGTGATATATATTTTGTG
TGTATAAATATTCGCGCCTTTTATCAGATGAATTTGATAACAGCATTCAC
TTTGAGAGAAAAATTCAGAACACTTCAATGTCAAATGGctcccagcggtt
tgcgtgaatgttCGAATAGGCTTTTtcatttgcgtgaatgcgtgaaaatt
aaaaaaaaattgggtcaaAGTCAGCATCTAATTATGTTCTGTATTTGTAA
ATAGACTGTTAGCGCGGTTTctatattttttagaatttttgaatgttttt
aaaattttgcgaatGTTGCTATTCGTTTTGaaagttcaatttttgatttc
actGCTTCTGCTGCAGTGTATGGCCCTTAAATGTAGGTTGGATCTAAAAG
TTTTCTAGagattctaataaaaaatacaCTTCACTGAACTTTTCGTAGTA
TTCAAAACTTCAGTACCTCTAATATCTTTCCCAAAAGTTGTTATACAAAA
GCTATGATTCCAACCATATTTTTAATCGCCCAAAGTTAGATCACCTTTTT
TCAATGGGCCCTAAAATGTAGGTTTCTCCAAAACTACTATTGGTATCGAG
TAGAAATTGTTATCATAGTTTCAAAGTGTGATTCGGAAGattacgagctt
ctaattctttaCGTATATTTTCACAGCACGTTCATGGTTGTTAAAATGCA
GGTTTGTGAGCCCTAAGATGTAGGTTTCTTTAAATCCAAATTATGGATTA
TAGTGAAGTAAACAGAAAAATCTGATTACATATTCTCGTTATCCGATGAA
TGATAAATGTACCTTGTGACTAGCATGAAATTGATCGTTTCACGTTGAAG
AATTTGAGAGTTTGAGAGACaagatagaaaatttcaaaaatgcagAAATG
GCAATTTTTAGCggctgacgtcattaaaaatttttgaacgaaaattTTAC
TTTGGAAACAATTCTTCTCGGATGTGGTGTGTCTTGTCAAAATTCTATAA
TCAACGTTTTACTCCATAGCATAAGAAGATATCAGACTTTGAAAGAATTT
GTCACCTATTTTCTacacaaaaatgcaaaattttgctgttttttccgatt
cagcaatattttttcgaaaattatgacttttcttTGGAAAAGTATCAGGT
TCTATCAgtagaaaaacattttaaaggttttcttttaattttcacatTCA
GATTTTTCAGACCTTGAAATCCTGATTCAGGGGCCCCGAAAATGCTGGTT
AGCTTCaagaagctatttttttcattggctgcatCCAGAGATAATTTTGT
TAGGATTTCCTAGTAGCTTTTGGATATAAGAATCTCCTATACCAAATCTT
AAGAACTTTTCTGCGATATTTAGGGAGCTGGAGTCAGTTAAACACATTTT
TTGGGAATCTTGATGGTTCAATTTTTGATGTAACCCACATAATTTCACCT
AAATGAGGCGCATAAGATGGGTCCAGGATTGATTTCGACATCTCCACACA
GTAACAGTCTGTTATAACAGCAATGGTTTGCATAATACGTGATTGGAGCT
GAGTAGAAAGTTCTTTTGGATGTGTACAGTGCGTACTCTCGTTGTTTTTG
TTGAATAGCACACGAGTCAGTCAATGTAAACAACAGAATCAGGagcaaaa
agttcattttttccatttcctGTTGACGTTTAGTATGGAAAATACACCAA
AAGATGCAGAATCTGTTCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCACGAGAAAGTCGAGAACTCTCATTGACCA
CGTCATTACCAACACTGATACGAAATTGATCGCGAGTGACGTTGTCTTCT
GTGACGAAATATCCGATCATGACTCTCCATTTTGtatattaaaaatcaat
aagccTCGATACGAACCTCGACACAAATACATCAGAGACGAGCGAAGCCT
TGTACTTGAAAGCTATGTTAACGATTTTCGTGAGCTTCCATTGAACATCG
TGTACGCTTTTGACAACACCTCAGATAAGGTCAGTGCACTCAATAAACTA
ATCACTGAGTGTATTGACCGCCATGCACCTATACGAAAAGTTAAATTGAC
ACGCCCGTCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAC
TTAAAGCCATCCAAAAACTGAGATCGGACTGCTCAACCGGCCCAGACAAT
ATCCCATCAAAGTTCGTCAAACCAGTGTCAGAATACCTCGCATCACCCCT
GACTCACATCATCAACAGCTGTATAACAACGTCAACTTTTCCAGACGACG
GAAAAATTAGCCGAATCTGTCCTGTACCCAAAATCAACGATCCCCAATCA
CTAATCGACTACAGACCCATCAGCATCCTACCAATCCTATCCAAGGTATT
CGAAAGAGTTATTCTTCAACAACTTACAGACCACATTGAAACGAAATCTA
TTTACCTCGACAGTCAATCCGGTTTCCGAAAATCACATTCAACCACAACT
GTTCTACTTAAACTGAAAGATGATATTAAAACTGCAATGAGTAGAAGTGA
AGTGACCTTAtcgatttttgccgatttctcgaaATCTTTTGATACAGTTG
ATTATCGTATTCTACTGGAGCATCTCAACAATCTTGGCTTCTCCCGACAA
GTCTTGTTTCTTATCGGTGATTATCTGTCCAACCGTAAACAGTACGCTCA
GATCGACGACAAATCGTCTAACAAGTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNaaaaaaaaaaaaatttaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaatttaaaacttttaaaactaaaaacGTCTT
TATCTTATAAAATATGAAGTACTCAAAACAACTTAGGAAAAATTTTTCGT
TTAAAATGTAACTGCAGGCTAAGACGCTTTACTACATTTTAGGGGCCACA
AAGTCCCTTTCAAGCCTCATAACCCCTTCCATCGTATTGTttataaaatt
ctcgatcccaTGAGAGGTCACGGACCTTTAGTAAGATGGTTATTGAAACT
GTCTGTTATGGTTATGTCCgtaccatttttctttaaaagtataTTCGGTC
AAATCTCAGCTCATAATTAAGGCTGCGGTTTTAAGGCTCTATTCACTTTG
GCGGTTGGTCGGTTAGATCGGTTAATTCAAGGGCTTACAGTATTAGTGTT
GACCTTTGGTTAAATCTAAATCAATTAGTGGGAGTTTATGTGTCGGTGTT
TTTTTCTGTAATGGAAACAGTTAGCAGTCTTTGGCTTTGGTTTGTCTAGA
TTTACTGAGGTGAAAGTAGATCAGCATTTTTACCGTCCTTGATTTTGCGA
GTCAGAACTGCGAGTTGTTCCTAATTGTATCAGTCACTCTGCTGTTCTCA
AAAGGATACATAATAAACTGGCGATTATCTAGTTCGACCAATTCTACAGT
CCCACAAAATGTATATGTCCCACAGAATGCTAATGGTTTGATGCAAAAAT
GCATCCTGTATTTTGGAAGATCCTTGAGTTTTGAAAGTCGAAAATTCAAA
GGactcaaagaattttttcaaaagaaaaacttgtaGCTCCCTCGTCACTC
TTTGTGGGCTAAGTTTTGGCCAATAAGGTATAAAAAGAGGCTTCCCGTCT
CAAAATTCAGCCAAAGATTAAGAATCTAGGCAATTTCGTTGTGTAAAGCC
GACTTTTCGTCTGagacaaaaaaaactttagtcAAAGCAAAGCATGTACT
TAGGATTTCTCATAAAATACTGTTATCTACCTATTGTTATTGAGTCtatg
taccttaagggaagaaattttcgcgagaagaaattttcgcgaatcagagt
ttcaaaatggcaaatttcgcggaatttaaatTGGCGAATGAGccaatttc
aaaagtttcacggaatttaatttcgcggttgagggaattatttgtctacg
aaaagccctattttgccctaaaaagaccaattttaggggtgattttTTAA
TTGTGAGAATATTCGTATTTCGCGGAATTTGATTTCGCGGTTTAGCCATT
Tttgtgtgtttcgcggaatttaatttcgcgaattacccccaaactcgcga
aattaaattccgcgaaaatttcttcccttaagagTATCTCTGGTGTTTTT
TTTACCACTGAGACGGTTAGATTCTGACTTTTCTAGATCCTGATCGACTA
AGTGGGTTATGttgtattttttccaaatcgcttcagtcactctgcCGGCT
TCAAAAGTATATATACATAAACTTGCTTTTCTTTCAGATAATAGCTTGCT
TGGATGATCATAACGAAACTACACGTTTAGTGACCGTCAAGGTGATGTTG
AAACTTTTGCAAGTCTGTGGTCCTTCATTTGATGGTATGAATTTCTCTTT
TCTATTAGCATCACTTTTCCTGTAAAGCACCCTTTTTTACAAGGACTTTG
TGCATCAAATTATGCTAAGAAATAATAGGATCTGTATTGTACTAATCATA
TACCTTATAATTCTGAAGAGCATTCTCCCTTTAATCCAAGGGTTATAAGT
TTGATCCCCGGTCAACGCCAACTCTCAGCGCATAAGTATAGATTGAGTAA
TTTGATCTAGGTGGCAAGTGCAGGGAAGCTGAGAGTAAGTGTGGCGCTCC
ATCTCAGCATTCAATCTTCCAGATCTagtgcaaatagaaaaggggataga
atCCTGGTCCTGCCGAGTTTTTTCATCTTCCCTTTGTTTTCAAACAGTTG
AGCAGTTACACGTCATTTATCCGGAAGTTTTGAAACGTTTGGACGACAGT
TCGGATGACATTCGTATCCTGGCTACTAAAGCTCTGGCTGCTTATTTCAA
GTAAGGAATTTTCAATGATTCAAAAAACCCTTAGTACCCTTATCAAAAAG
ATGATATGATGACATGATCTACATACATAAAATGTAGTCTTTTGAGGAAA
AAagactcttaggttccaaataaacgcccccccccccgcagaccttatgt
taatgttaatgtatttattcttaaagtcgaaaaaaactgtacaaatctgt
actagctttaaagctaatagaggTCGACTGCCTATTTACAAAATTAATCA
TTCATCACCATCTGTAGACGAATAATCTACATCATCTGTTGATGCCCAAT
CactgacgatttcttctgtagaaTATTTTGGTtaataatttgaagatatt
tttgtttggttttgtaattttttaacgaagcgtagttttgttcttgggct
tcctcttaAATACGCGTCAGTTGAATTCTTTAttgttattgtctttgtta
AGATTCTTTGtttgttcgtgcatctcctttatctttttccgttcgttgat
tgtgaaatcttccgtgatacttacctgaaagaaacaagtttatttaagca
tgtgtaaattcttcattGTAAGATTTTTGTCATGCTGACTTTGTAAGGTA
ACTTAAAGAGGACGGCCATTCTTTGCTTTTATGTTTCCTAATCTGTGGAG
TGTAACATtgatttctggaacattgatttcatctaggagttctcggaacc
gaaatatgtcatattttactccattttcttcttcttccttatttgggcct
gaatattcgagaaacccgtgaacgatgatattcagttttctagagTACGT
ctctttttcactttcttcctccTATTTTTGTTTTTCGGCAGATCTTTTCC
TCCATTTCTTGTAGTTTTCCTGCCAGAACAGTTTTGagatcatttttgat
ggaatcacgggttttggtgttggtgttgacctcgttgttcagtttttgta
tgacgtcgcctttctttttaagttcattttgcatcatatgctgagtgttt
tttcccactttatttcttaggCTCTTCGTTATTCGGACGAACtttgaaca
taagtaatgatcgtTATAGGATGTCACGAATATTTTTAGTTGATACAAAG
GTAGCTAGctgtgtgcactcataatgaactgatcttttacattCTAAGCG
ATCCAGGTCTTTGTCATTTgtacatcttgacggcgtgcaaACTTGAGGTG
GCGAGGCAgcttcgaaaggctgatcttatccgttttgatgttattttcat
aaattttgtcttatctaattgacgtcaaataaaaactgacGGGGGGGGGG
TCTATTAGGACCGCCCCCTTTATTGATTTATAAGAAGTCCCTTATTCTGC
TGATTTAAGCCTATATTATAATGAAACGAATAAACTAAGGGTTGATCTTC
GTATAAGGCTTTGATCATATGAATCACAATATCTATACTTTGCATTGTGT
AAAGCTTTAGGGACTTTTCTGGATCTTTGGATTCTTTAAGAATACATTTC
TTTAAAAGATACTCTCTGCTGTTCATACAGTTGATGCTAAAAtgctttta
ttttattctagttCATTACCATCCAACTATGATCGTGAATTCTTCCAAGT
CCATTTAGAATTCATCTATAAAACATTACTCATTCACATGGATGATTCTC
ATCAAAACGTCCAGGTAATACTTAATTAACAAATGCGATTACCCTAGGAA
CCAGTCCTCTAGTTGGGCATATCTTAATCACAGATATTTATTAAGTTCGA
AGGGCTAAGATGtagtgcttttgctgaaaagtgttccgtggttaggtagg
aaatcctacctaggtgacgtgacattacaatagaatttcagcgcttgacc
aatcagaagcttcgagGATTTTCAGAAACAATAGAAACTATATTTCTTAC
Ggttaatgaatcaacggatcctgcactaatgcacttcccagttttctcaa
aggtaacgcatcgagtggggattgaacccacgacctctcgcttgccgggc
gattgctctcccaatcagtgcaggatccgttgattcgtTACCCATAAGTT
ATATTTCTTGCAATATTCACTTTCtattgcctgcgatggcttaaagcccg
ACAATCTAGCCCTTtaggctttataaatctgtgatCTGTGATTTTAATCC
CCTCGGCTGCGCGAATAGTAAtcgtaaaaaatcataaatcctCATCTTAG
CTATAATTCTTTAAAGACGAGACTTAAACCTCTGGGATGTAAGATCTCGC
TAATATTTATTGGAACTGAAAGTGAATGAAACTGATTTCATGTCTTTGTT
TCCCTCTCTAACTTGCCCGTAGAGGGATGTTTGATTAATTTGCCGTTTGA
TCGTTTTTTTATTAGATGACAATTTGATCgatttttttctaagatttgCT
CCTAATTTTCTGAAGATTTGAATGTCTTAGGTGGGGTTTCTAGTCATTTT
TCATTCTTCCTGACCCAAGGACTCTTTTTAcaattttcgcttttttcacG
GTTTTTCGGCAAAACCACGAAATTTAGAACCCGCAAATTACaaatttggt
catttttcatcaaaaatttaaaaaatccctaggaaaattaGTTCCATTAA
GGTAGTGTGGATTGGTTCATTGTTACTTCGGTACGCTTTGGATACTGAGT
CTCATCTATTATTTCAGGAAGCAGTGTACACCTGTCTCAAAGAAGGTGTT
CAAATACATGCTGGTTTATTGAAGAATAAAGTTGAAGATGTTAAGAATAA
ACACAGAACAAAAACGTAAGAACATACGCTTATTATGGACTATTTCAAGT
CCGCAATGAATCATGGTTCCCAGTGGTTTGGAAAATTGGAAGAGGCCTCT
TATAAGAAAAGGAACAGGGAAATTAGTAAAAGTCATAGAATTTCTGTAAT
ACTCCTCTAAATgtacatacacttttttttataagaacatccaaattttt
tgaagccttggggtgttcttaacttcttgagttttaagcctaaaaatgtt
cttaacatgtttttgttttcgctattttgtgaatatttttgtccattttc
ctttgaaatcgggtgttttaaggtccgcaaagccttaaaatattcttaac
ctgttcttaacattttggccatcgaagctttatgttcttatatagtttgg
tcttatataaaaaacgtgtatgtacaTCTGCGTTCATTACAGACCATTTC
AAGGTCGCAATGAATCATAGGGAATCAGGGAATCGGGTATGGCGATGCAA
CAATAACAAGTGTCTGTTGTTCggacatgaaattttttggatCAATCGAA
ACTTTTCATCAGAGGCCGCACCACCTATCATTTTGGTGCTAATCGCAGTT
TCGGGCGAGGGCGCGAAATTGTGATTAGTGGCGGTAGACAAGAAGGCCGC
CCGCGACTCTCTCCAGTCCTCTCACGCATGTTGTTGTACCCAGACCCCGC
GTGTTCTTCCTTCTTCGACCCACTCAATATTCGGTCGTGTTTTCTTTCCC
TCCTTCCCACCCTTACTCAATTGCGCCCACACGGGTTTCTCCTATCATGT
CGTGGTTGGTCACTTGATTGTGACGTCTAGATTCTAGTGCCTCTACTATA
CGCCCTCTGTTTTAAGGCTATGCCGCCTATGGTATACGCCCTCTGAATTA
AGGGTATACTACGCCATCCACTTAGTTCCTCTAGGAGTGACCCCAATATC
CACCACACTTGTACATAAAACTTATAAAATGCTACAGAATATATTTCATC
AGGGTCAAACGACTCAACTTAGTGTCTATTTCTTGTCTCCCAGTCACTAA
AGCTGAAAAACCAAAAGGTTTTCCTTATCAAGGCTTCCTTACATCAGTAt
ctggaaaaaaaagttttgtttgtcTCGGTGGtctaaagttttaaaattgt
atttttctttcatttaggTATTGCGAGGAACTGTCAAAACTTTGTGAATC
ACAATTACGCGAAGTTTAGAAGTTTGGTGCTATAAGGTTTTCCAGattga
gaaaatttttactgatgatgaatgaatacaaaaaaaacatgtGGCTCAAT
TGCCCTCTTTCCTGGCAATAACAATCtccaaaagaaaatatcaagaagAG
CCAAAGATCTTTATCACCATccaaaacaaactatatgaaTTATATTCTAG
TCCATTTTTTACCCGGGGGGACCTAGGCAAGTGAAGAGTACAGGTATGTG
CCgtccttaagggtgccttttttggaaactggcagtccctgtaagggttg
gagaaatcagaaaatcaaatatcagtcccattaagggtcggaaaaagatg
aaaatttcaattctttgtccctaaaaacatcgaaatttgatcaaattagt
cccaataaaataacaaaattttccgCTTTTACCTCTTtttagtcccacta
agggtgcgagggtcgaaagtcgggcggcacgcccccgtcagctcgcaaca
cTAGTACCCAAGGATTTTTTACTAGTTACTAGCCTTTTCTCCTGCAAAGC
CAGTTACACTAATATGGCTTTTGGGTTTTTAACGGCGCAAGTATAAGATA
TAATTATAATATTTTTGATTCtatgacatgattaattaacttTTGAGATT
GTATATATATTAGGTATTAAGCAGATTTAGAGCtttatttattttcactt
atttttcaataatgatATGTCTTTTATCTTAGCGTAAACGTTCTGGTAAT
TTACAGTTGTTTTTTATTGTCTTTGTCCTATCCCCCCTCCATCTACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008592-exon-sc0000086-1491911889:943189..943277 | TCONS_00008592-exon-sc0000086-1491911889:943189..943277 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1510915933:943189..943277 | TCONS_00008592-exon-sc0000086-1510915933:943189..943277 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1575043694:943189..943277 | TCONS_00008592-exon-sc0000086-1575043694:943189..943277 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1491911889:953526..953622 | TCONS_00008592-exon-sc0000086-1491911889:953526..953622 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1510915933:953526..953622 | TCONS_00008592-exon-sc0000086-1510915933:953526..953622 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1575043694:953526..953622 | TCONS_00008592-exon-sc0000086-1575043694:953526..953622 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1491911889:953986..954088 | TCONS_00008592-exon-sc0000086-1491911889:953986..954088 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1510915933:953986..954088 | TCONS_00008592-exon-sc0000086-1510915933:953986..954088 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1575043694:953986..954088 | TCONS_00008592-exon-sc0000086-1575043694:953986..954088 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1491911889:955650..955752 | TCONS_00008592-exon-sc0000086-1491911889:955650..955752 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1510915933:955650..955752 | TCONS_00008592-exon-sc0000086-1510915933:955650..955752 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1575043694:955650..955752 | TCONS_00008592-exon-sc0000086-1575043694:955650..955752 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1491911889:956756..956853 | TCONS_00008592-exon-sc0000086-1491911889:956756..956853 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1510915933:956756..956853 | TCONS_00008592-exon-sc0000086-1510915933:956756..956853 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1575043694:956756..956853 | TCONS_00008592-exon-sc0000086-1575043694:956756..956853 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1491911889:958006..958836 | TCONS_00008592-exon-sc0000086-1491911889:958006..958836 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1510915933:958006..958836 | TCONS_00008592-exon-sc0000086-1510915933:958006..958836 | Clytia hemisphaerica | exon |
| TCONS_00008592-exon-sc0000086-1575043694:958006..958836 | TCONS_00008592-exon-sc0000086-1575043694:958006..958836 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086 | supercontig | sc0000086:943189..958836 + |
Blast
BLAST of TCONS_00008592 vs. Swiss-Prot (Human)
Match: DAAF5 (Dynein assembly factor 5, axonemal OS=Homo sapiens GN=DNAAF5 PE=1 SV=4) HSP 1 Score: 123.25 bits (308), Expect = 6.883e-30 Identity = 56/167 (33.53%), Postives = 103/167 (61.68%), Query Frame = 3
Query: 6 ISFLWAMLESGVITDGHLKESFKEIHTQIIACLDDHNETTRLVTVKVMLKLLQVCGPSFDVEQLHVIYPEVLKRLDDSSDDIRILATKALAAYFNSLPSNYDREFFQVHLEFIYKTLLIHMDDSHQNVQEAVYTCLKEGVQIHAGLLKNKVEDVKNKHRTKTYCEEL 506
+S LWA+ S V++ +++ + + Q++ L++ ++ TRL++ +++ L+ G D E+L IYPE+LKRLDD S+D+R+ A L + + + ++Q ++++Y+ LL+H+DD + +Q+A+ LKEG + LL + E V +KHR+ TYCE+L
Sbjct: 678 VSCLWALTSSEVLSAEQIRDVQETLMPQVLTTLEEDSKMTRLISCRIINTFLKTSGGMTDPEKLIRIYPELLKRLDDVSNDVRMAAASTLVTWLQCVKGANAKSYYQSSVQYLYRELLVHLDDPERAIQDAILEVLKEGSGLFPDLLVRETEAVIHKHRSATYCEQL 844
The following BLAST results are available for this feature:
|
