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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008567 ID=TCONS_00008567|Name=TCONS_00008567|organism=Clytia hemisphaerica|type=transcript|length=1359bp
GTTTGTTTGGGTTTGTCATCCAGTAAAAAGCAGCCAAGAGAGATAGATGA
CTAGATGAAtttgatataaaaatgaaaacattacaACCAACTTTAAGTCA
TGCAGAAGTAGAATTTCTTGCTGAACACTCAGACGTCACTATATTACCAA
ACTTCCAAGAATCGAAATTGTTCTTTCTAACTGGTGATTTTGGTCCTTTC
AATCCTGGTATGCCAATTGATGTTCCTGCATGGTTAGCTGtgacgttgaa
acaacaaaataaatgcAAAATACACTGCCCTGATTGGTTAGACGtagATC
GTCTTCAAGATTTCAAGGACGCAGAGAACAACGAAGATGTATTTACAAAA
CCACCTGTTCCTCATTATAAGGAGATCGCATCAATGCTCCTCAGATGTGG
ACCAGGGGATATTCCCAAAGCTGACGAAGTGAGGACATTGATCAAAGATA
TTTGGGACATAAGGATGGCTAAATTAAGAAAATCTATCGATCAGATGGTC
ATCGCTCAAGAACCGCACGCACAGatTGATAACTTGACAGTGATGGAGAT
GAATTTTGTGAGGACTATATTACTACCAACGTTGAATGAAATACACAATA
TGCGTTGCTATGTTACACAACTCCCAGCGTCATCCTAAACgaatcttttt
cgaaatttcttttCCTGTTTTTAAAAAGCAGAATGTTATACATCATGCAC
CAAGTGTAGAGTTATGATTGAATAGTCATATTTTGCAATCCAGGAAAGAC
TTTACTTGCCACATGTAAAATATGTGGAAAATTGGCAAGTAAAATAATTG
GAGCAAATAGAAACCTTTGGGATTGCCTATGTGCAATAATGGTTAATATT
TATAGAAATACATGTCAAAGTGGATATTACAAGAAAGATCTATAAGATAG
ACGATGAGAAATGATGGATGCTGGATTTTTCACGGTTACTTTTTTGGATT
GGTTATCAATTCTTGGTATTGCTTAAATCAAAGCAAATTTGAATACAATA
TTTAGCTATTTTAAAGCTAACAAATCGACTATCGCTCGGTAGCTTGTATG
TACCTCCAAAGTATTATTGTATTTAAACAGGTTTAGTTGGaactcaaaat
ttaatgaaattatatccttttcatattttttcgTACGTAAATGTTTAAAT
TTTAGACGTTTAGATTCAAAAGAAGCAATCAGCCGTTTTAACATTAGTTT
AACCTGGCATTatgtttatttgaaactttggacTTGAATTTCATTGGCTT
AGTTTGTTCAactgatattttgaaaactaCCTGGCAATTGAATTATTTGA
ACcagttttaaattttgttttcaagtttcaATACCTATAGTATCAGAGAA
GGAAAACAC Run BLAST on NCBI protein sequence of TCONS_00008567-protein >TCONS_00008567-protein ID=TCONS_00008567-protein|Name=TCONS_00008567-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MKTLQPTLSHAEVEFLAEHSDVTILPNFQESKLFFLTGDFGPFNPGMPID
VPAWLAVTLKQQNKCKIHCPDWLDVDRLQDFKDAENNEDVFTKPPVPHYK
EIASMLLRCGPGDIPKADEVRTLIKDIWDIRMAKLRKSIDQMVIAQEPHA
QIDNLTVMEMNFVRTILLPTLNEIHNMRCYVTQLPASS Run BLAST on NCBI transcript from alignment at sc0000086:727656..741253+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008567 ID=TCONS_00008567|Name=TCONS_00008567|organism=Clytia hemisphaerica|type=transcript|length=13598bp|location=Sequence derived from alignment at sc0000086:727656..741253+ (Clytia hemisphaerica)
GTTTGTTTGGGTTTGTCATCCAGTAAAAAGCAGCCAAGAGAGATAGATGG
TAAGTGGTAGTTTTAACATGCTTTTAGCTAGAGATGTAAGTCTGAGAATT
CtcatttatttttgtctgttttacaATCGTGTAATTTTCATTCATAATCA
ATTcatcatagaccttttttcaaagaggacgtcctgttgaataattatgt
agtccagccatagaAACAATGATAGTGTACTtcatcatgcatattgtaat
aattacgcatggttttatcaatgttttttctgctggactacataattatt
caacagggtggcctctttgaaaaaaggtctattacgtTGTTATGTTGATA
GGactaaagacgaaagacatatCTAATCTGGGTCTGGAGAAGGATACTTT
TTTCCACcagacaatcaaaacaccggacatgaccagtctgGTGCGTGTCC
GGCATCCAAAATTTCccgtatgcaacaccggactgacaccggacttattt
attgcgtccggtgtagcgaaaggatactttttgccaccacCATCAGACAA
ATAcaacgacccacggcatggcccgaacatgttcgggtctgttcggacca
tgttcgggccatgtatttacaattgataggaatagtagaatttaatttta
ttaacctttcctggtttatcatcatccattgttaaatattttcattagac
aaattcaaagttccaaataccagtttgattcacaaagttgtataacagta
caaaaaacgatccagaaaaattctgcttcgaataggagaagaccacgaga
aaagggaacgggataaagaataaaaatgagaccatattatgtaagattca
aatcattctttttgatANNtataaatattgggtcctgaaattacacgcgc
gatcgtagcaagttttcgaaaatctggcccgaacatggtccgaaactgcg
cgggccacgcgcaggccatttaaaaaaagtattaatcagGAGGcctgaac
atgttcgggccatgctgCGGGTCgtcaaatacaccggacagtccggtgcg
tcggcagagTCCTGTCTTATTTCGTATTTTCCAGTCTCCTTGTTTGTAGC
TTTAATAAGTCTGATGGGGGAAAAAGTAGAGTATGCTGCATCATTCAGTC
TAGCAGAATCTTAattcttctttcagaaaaaagactataatttgcttacc
tttattcttgcagctttccaacatccaagctctcgaacatcacaagccga
atgaaattactttcgatttccagtagaaattatgcgatgaaaaatccggg
ggtcaatgaataaaaactttcttttcagcACTAGTTATCTTTGCTATAac
aaattattacttttcaatataatttGTTAAATATAATTTCTGATTGCAAA
AATACTTTATATTGtactgaaagtttgaaaaagttgattctacttagttc
tttattttcatgtCTAACCCCCCGTCTtaaaagaagtcccagaatcccgG
GATTTTGGCGgtcgggcgttcaaaacaaaggcgtttttatttttccctcc
acttacaaatttttctttaaaataggcatttgaaatatcaaatttaaaaa
taatagtatatataaaaccttattttctaccATAGTCCttcttctaaaac
gaaaaaagaaaatacactagaaaaataaagaaattacgagtgttatcaag
ccacccaaatTGAACTTTTATTTGTCGCGCGTCATATCGAATTGTTGTAT
ACGTCACgatctattgtcaaccattgtccaatcccgtaagcgattgaaat
gctgtcagtaataatctgagaaaAGAACAATAACtttatgacatcacaca
aataaattacgctaGGATAATCCGTGAGGACAACACATggtcttaacatt
tttccctcgcaagtttggggaaaacgaaagtactctatattttatGTATG
GGGAAGTGGaaaaaagatttacaaaatacaaaagtttcgttttgggtTAC
AGAATCAGTATTGTGAACTTAAGCAAGtttctattttgcattttttctat
agagccaaataaagattttttctattgttcttgcttGATTGCCACTAAGG
ATAAGTTCCCTAGGTATGAGGCTATCGAGACATaatgtgacgaatttgcg
cgAACACGAAATTTAACTGTTCTAGGCtgtcattcaaatcagaaagcaaa
gATAGTATATATAGATATATATACTCATTTGCTATACTCATTTTTTATAC
TCACTCATTTGCTCCCTATGGTCTTAATGATCGAGATGTGCCGTTAGAGG
ACTTTGGCTAGATTTAATCCGCACTccgattttttagttttttaattaca
taattccttttttctttatttttggtcNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTTAGCTAGTTTTATACCTAGATTATTCTTATAAATGTAATAGTGC
TTACTTtaatgtgtttttattttttctattgtcttgaTTTTAGTTGGAGA
CAAtagaaaagtgtttttaaatttttgtcgaGGAGTATCTGCTTCCACAT
CATGCCTCCCTTGCTAATTTTAGCTTGTTCTCATgagaatttttcatcat
ttctgtttttaacacttttaaataCCTGTACataaagttttttatcaatt
aatttttcctttataaatttaatttctattccctaagtatttcttttatc
aaacaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAATCATGTAAATACCACCT
CAGTTTGTACAGACTTCATTACTTGACAAAGACAAACGTCGAAATATTGT
ACACGTGTGTGTGTTTTTTCTGTGAAGCTATAGATATATATAgatataat
aaaaaattttatcgaaaagaaANttctaaaatggtagagtagagctgaga
gcagagctgcgtagttcttGCAATGTTAaatttggtttgaaattttactg
ctttggttggtcaggCATACTTACTTGTGTTACTTGTGTAGTTGTTTGAG
CATCCTGCTTCAGGTAAGGTTCTTGGTGAACCACGCCTCCGTGTGATCAA
Tctgtcaaaagaaaaagaatctcagcagatatttttcatgtcaattattg
aatttgaattagctCTCCTGCACCCAGTATATCCATGGATCTGGGGTTCA
TCTGGGCTGATCTGGGATAGACTTAAGGTGTGTGTCCAGGGCTCTTTTGA
ATTTATCGATAGAAATGTTTTTGAGGTTTCTGATGCTCTTTGGCATAGCA
TTAAAAAGTTTAGCACCTTGCACTGCAAGTGTGCTGTctctaaattttga
tgtttagtTCTTTGGAATTGACAGTGTACACATCCGGCCCAGGCGGGGGT
TTTGATATAATTTACAGTAGGTACAATCTTTTCCATCACCTTCCAGACAT
ACATTATTCTGTAGCGTTCTCTTCGCCTTTGAAGTGAGtaaatttttgtc
tgttttagacACTCCCAATAATTGTTTGGGGTGCCATTTATCTTTTGTAA
GAAGGACTTTTGAATGAGTCTCTGAATGAGACCAACTGCATTTGGGCTCC
ACAGAACGGAGCAATATTCTAATATTGGTATCACCAATGATTTATATAGT
ACGATCATACAATTTAAAGATCGTGAAGAAAAAGTTCTCAGGATCCAAGA
TGGTAAGTATTTAGCCTTTTCGATTACTGCAGTAATTTGCTTCTGAAATG
CGCAATTACTGTCCATCAGGATTCCAAGGTTTTTAacaacatttttgttt
tcaatctcAACACCAGACGGTGATGTATAGCTTGTTTGAGTCTTGATCTC
ATGGTTCTTTCCATAGCCCAAGagttcaaattttatatcatttagCTTCA
TATTGTTTTCATCCATCCATTTATATTCTATCAAGATCGTTTTGAAGTAG
GACAGCATCTCCTAGAGTTTTGACTTCCTTTGTGGCGCGAGTGTCATCAG
CGAAGGATTTGAGAAAGCTGTGCACCACTTCCTTGTCAATATCCCCAATC
AATATGAGGAAAATCAAAGGTCCCAAAACACTACCTTGAGGGACTGCTGA
AATGATCTGTTGTGATTCAGAAGTGACACCATTCACTAGCACTGATTGTT
TTCTCTCTGTTAGGAAGGACTTTAGCCACTGTAATAATTTTCCATCTATT
cctagtttctttatttttcgtagGACAATTGAATGGCCTACTTTGTCAAA
AGCCTTTGAGAAATCTAGGTACACAACATCCGCATTAGCATCTTCGTCCA
ATATATTTAGTATCAGGTCATATTGTTCCAAAAGCTGACTCAAACATGAA
CGCCCGCTTCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTCGTCTGGGACAATCCCTTTGTCCAAACTTTGTCTCCA
GAGGATACAAAGAGGAATAGAAAGTTCTTCTTTGCATTGTTTGAGAAAGG
TTGCAGGGAAACCATCAGGACCTGGTGCTGCAGTATGGGACAGATCGTTG
ATTGCTTTTATTAAATCATCTTATGTAACTTGTAGATCTGAAATGATATC
TACGTTGACTTCATCATTTTCACTCTGCATTATATCGAATGGTTTTGGTG
CACTGAAGACGGAAACATATTGTCTTGACagaatttcagccatttttttg
cTTCGTTGCGTTAATTCACCATTTGTGTTCAGCAGAGggccaatttttgt
ttttatctttgctttctttctcgcataagcaaagaaatattttgagtttt
tctttatGGAATTGATTGCTATATGTTCAACATAACACTTGGAATCCCTA
AATGATTTTTGTAAGTCCTTTTCAATTGTCAAAAGTTCCTTTGTTATTTT
AGTCTTTCATTGGGTTGGgacgtgcattttaaaaattgctttgtaatttt
tcttcttcttttcgtaAGAGAGCGGCAATAtctttcaacttttgatttct
tCCTGGTATCTTTGGTTGTTCTGACTGGTATTCGTCCTCTGCATACGTCC
AAAAGTAAAGCAATCTGCAAAGTATTACCGTACTGTAATTTGCATCAGtt
gaggcaaacatgcatagccctcaaatgaatacctgtctggtcattacaAT
ACAAAgtatataaaatcaaaacaaaaatggtagagtagagctgcgagcag
agctgcgtagttcatttgtttgaaattttgctgttttgattggtcagtca
ttttaTGCAAGtctccctccactgatgcaagttaccccacTTCACAGTAA
GTCACTGGATGCGAAGAATATATAATGACTCCAAAAAGACCAACCAGAAA
GAATTTGGAATGACGACTTAAAAGTTGGGACAAAAAACTCTGttaaaaaa
aacacacacaAGGGACTACACAGAAAATAACTAGAAATAGAAGCTTACCt
tatgtgaaaattttaaataggTTTAAAGATAAGCAATGCCAGACTAAGTT
GATTGATTGAATATGAATAGAGTGTCTTGGAGGGAAGAAAtcagaaattt
aattacatgGAGAATAGGTCTGACtcataaagaaaatttaaaatattata
tTGATCTAATTCTTAGCAAAATGAGAACAAACTACTGatttaaaaatctt
tcccaTCCttcatattaaaaaaattgtttggtaaTTTTTTCCACCAAAAC
AGTTTGCAACAGTTGCTGGGATAATTGAGTCTCCGTATGCTACTGTATAA
CTCGTCCATGTAATGTTTGGAACTTGTTAACTGTCCTGGACTGGTTTCGG
TAAAACACCGGGTATTGCAAGTTACCCTCTCTTATACGATGAAGAAGTAC
AATTGAGTCAACTTTTAAAGGATGTTCTAAAGTTTTCCAATTCAATTCAT
TCGTCATTCTTGTAGGGCTAGATTTCCAGGATGTCAGAATAGAATTGACA
ATGATTGTCAATTCTATTCTGACATCCTGGAAAAATGCTCTTGAGTTAAT
ATGATATTTATTGTTTTTGACATTAAAGAAATTCTTTCTGGGGAACCAGA
GTTAATGAAATCACCTTCAccagggttggtctaaaaagcagggtagccaa
tttgGGAAGAAAattggacttggttttgatgtACCCCTATTTTGCCCAAA
TATTTGAAGCCTAGTGCTtttaaaatttgtgaaaatacaATACTAGAATC
TTTTAACAATCATTTATTTGAAGAAATAAGGTTTAAGTATTCTCCACTAG
TTACATACTGTggtcatttttgtaaaaagtactAAAATCTACTTCTATTT
ACTGAATACGGTCGCGTCTTGTAGTAAACAAGTTTCTTGAGAAACAAACT
CTGACCATGTGTTATAGCTtaaatctttgaattttttctgtaTCATAAAT
gaataattcgaaaaaattttcaaagtgttACCCCTAATGTAGCCAAGCAA
GCTCGGCGCTCGCTAATGCTTCTTACTCACGAGCGCGAGCGTCGAGTACG
ACCCACCACAAAGTTTAGTCCAGATCTGGACTAAACGTCATTGATTGGtt
gaatttttaacaaataaatttaaaaaaattcttttgttgtgGCTACACTT
CCCATAAAAATAGTAGCGCGCATTAGGAAAGATTAATTTAGTGCGTGCAA
CCACAAATGTCAACAAACTTTCAATTCAAGAAATAGGCCTTCCTTGGAGC
GTGATACCTAAGCTTTTTAGTTTACTTATCCCGGACTTATTCTAGTAGGT
GAGGACTTTTGGTTTATTAGGTTCGCTTTCCTTAGCCTTCTTGTGTTTCT
TCATTTCAAAACCTCACATGTGAGAATAAACAGTGAAAGAATACTTCatg
tttttccttttcttttctaTCCATTTTTCAGCTGCAGAATTTATCTGAGA
GATGCTTCTCATTTTTTGGTTTCTAtctttatccaatttgtttTCAGAGA
ATATATTTAACGCCGCACTGTACCACACAGAAACCAGGGAAACATAGTGC
AGTATTCTATTTTTGATAGCTAAGCAGAGCTAAGTTAAAAGAATTTAACA
CAGTCAGTGCTTGGTTTCTATCCATAGTAAGAAGCACCAAAAACGTCGAG
CTTTGCTAGTGTAGATCGTGTAGAAACCAGGAAAGGTGCAATGTTTGCCC
TCTATTGCAatttaactttcaaaaaatatcatttgctTTCTATGATCTCA
CTCACTGAAATgaatatatttgaaaaagtcttcattttcttttgagtAGC
AAAGGCAAGGAGttaaaaacaaacttaaaaAGATGGCAGCCTTAACTAag
acaatttcaaaacattgcAGGGAAAGAGAACAAGTTTGAAGGAGATTTTG
TTGCTAAATTGGGCTGAAATTAAGCTTTTAAACATGTCTGAGACACTaag
aaaatatcattttgattgatttaattattaaatataatatataattgaCT
TAATTACGGCTGAAATTCGCTTTGACTCCTTCACAATGATGTAGTGAGAG
CTACAATgttcttcgtgtgcacagacttgttaaaataaactaattttttt
taaatgatcaattaggtctataagatcacaaaaacaagtggtgagaaaaa
ttttgaccattttgctggtccccatgtgacgtcatcacttttgctggggc
ttgaaaatgaaagtgaaaattagaagctcagatatggctcaaatgaaaga
tatctatccaaagattccaaaaagtatcacaacatatacctacaaatcaa
tatttgagaagctataaaggaaaatagcttaaaacatgacgtcatcgatg
acgtcatcggcaattaaaaagtcatcaaaatcgaaaattctTTGTTTCGT
TTGAAAGAGGACCAGCTTGGGAACAAAGAATATTACTACAGAAAACCTTG
AATTTCACTTGATAGGAAATTATTGTCTGAAATGCGTTTGACTTGACTCT
TAAGCTTTTAAGGATTCATGGGAGTGCCCGAAGTTTAACCTTTCGCAggc
aaatttaatgaattacaaaTTTGCTGACAGGGGCTTATAAAGagaaattc
agatttttttgtagtaatattttttgttcactagatggtcctctttcaaa
tgaaacaaaaatttttttgattgttgatgacgtcatcaatgacgtcatgt
tttaagctattttcctttatagcttctcaaatattgatttgcAGGTTACA
TTCAACAACAGTTACATTCAATTAAACCAGAATTATGCCAAAGTTTAACT
ACTAACTACACGAAATGTTAGTCATAATCAAGATTCTATTTGAATTTCTT
GCAAATTATGCAATTTACTCAAAATCTGGTCCAAGAATATAAACTTTTTG
TAGCTTtatttctgacccctactaccaatgttttttggaatcagcataaa
atttctgataatttgatATGCCACATGACTCTGCATGACTATGTTTTAAG
AAAGTTTGTGTTAGGCTATTTTCGGTCCGGGGTCGCGCTGAGTACCCCGC
AGAAATGGGGTCCAGGGGGACTTTGAAAAGGGTCcccggtcaaaattttt
gatttttttcttccttttatataatttggcaacttttatacatatgccac
tatttgtttttttctaagtcCCATCTCTACTATATCTTTCATTTAGGGGA
ACCGTCAATGATTCCAGACCCTGGTGTTGTTGTTATACATTTCCTTTTCA
AATTGCTGTTTACGACCCACTTTGCAAGGGCTGTATATCAATAGATATAG
AAATTAGAGGAAAGagctaccttattacacgaaaataAGTAGGCTACACA
GaattaacggccttgaaattaccACGTAAAAAGATAACAcagattttatt
tgttttgtcaAGGACACCACATTaacacaaaatttcataattcgTGTTAA
TTTAATGTCTACTTATAAGCTAGAGTTATAAGCTAGCTGATTCTAACTTT
ACCAAAtaatgttttcattgaaaaattataAGCAGCAAACAAGGGAAATT
GACAATTGTGGTTAGttaaaacttttaacaaaaatggAGTAGAAACCAct
gcaaaagaaaaacaacatttcaaaaaattatttaaaaacaaatattattA
GGAATCTTTGATACTTTTGTAATgttgtttttaaaatcttttttacagAC
TAGATGAAtttgatataaaaatgaaaacattacaACCAACTTTAAGTCAT
GCAGAAGTAGAATTTCTTGCTGAACACTCAGACGTCACTATATTACCAAA
CTTCCAAGAATCGAAATTGTTCTTTCTAACTGTAAGTGTTTacatttcac
ttttcaaaataaattattttaaattgtgtTGAATTCAATTTTGTCAAGCT
TTACAATATTCCAGTTCTAGAATTGTTTTTACGACAAATAAAGTACATAG
CTACCAGTTTCACGCCAATGATTATCAAAAGTAAAATGTTATATTAAATG
AAATTTGGTGGTTAACTATGAAGTTTTTCAGAGGAAATTTTAATCTGGCA
AAATAATAAAGTTAGGGGAAACTTATTTTAGCAGATGTTTGATCAAGTCT
GCCAAATCCACAAAATCCCTCTatttaaagataaaatttaTCATGAACCG
TTTTATTTGAAGGGTGATTTTGGTCCTTTCAATCCTGGTATGCCAATTGA
TGTTCCTGCATGGTTAGCTGtgacgttgaaacaacaaaataaatgcAAAA
TACACTGCCCTGATTGGTTAGACGtaggtatggtgtaatttgatGTGAAC
ATGGAagaatattcttttatttttactttttcttaagCTTTCTGAAGACA
GGGGGTGGAGACCTCTCAAAAATCACCTTCTGTATTATTGCCTTATGGAG
GGAGGGATAAGTTTTTAACTGTGAAATAAAAACTTAATTGGAGATTGTTT
CACTTTTTAGATCGTCTTCAAGATTTCAAGGACGCAGAGAACAACGAAGA
TGTATTTACAAAACCACCTGTTCCTCATTATAAGGAGATCGCATCAATGC
TCCTCAGATGGTATATGATATTTACAGTAGTCCACCCTATTGTCAGATGG
TATATAATAATTACAGTAGTCCACCCTATTGCCACAAGTGAATGCCTTAT
ACCATGTTGAACTTATTCAGCTTTCATTTAAAACacctaaataaaataaa
ataaaattctttttttttggaatgtTACATAGCTGCCAGTGTCATCCTAA
ATTGGAATCGACAAACCTTTAGGAGCCGTATTATCTTTCGTGGGACGTAA
CCGCATGTTATTGGTTCGAAAGCAGACACTAgaattttgagacttttttg
agaggggaCCTGCAAATTAGGCCTGACAAAAGTTTTTATTGCCAAAAGGT
TGGTCTGCTACTGAAATgaatacttttcaaaaaatacaaaacataaaata
taatgCAAAAGGATATAATATAAGGGATAAACATGTAGATTCTGTTGATA
AGCTAAAACCACTAAAAATTATTGCTTGCTTTCCTTCAGTGGACCAGGGG
ATATTCCCAAAGCTGACGAAGTGAGGACATTGATCAAAGATATTTGGGAC
ATAAGGATGGCTAAATTAAGAAAATCTATCGATCAGATGGTCATCGCTCA
AGAACCGCACGCACAGGTGTGATTCGATCTCATGATTTTACTTAACTTCA
AGATTTGAACTTTCTTTTTAAAAGCCTTATCCAAAATACTACATCCCATC
CGGATTTGGGATTGTATACAGCCACAGTCTAATAGATTTCGGTGTTTGAT
ATCCTtttgaataatgaaaaataatatatcaGAAAATCTCTCAGGTTTTG
ATCTCCAACTTATTTGTGCTAATGATGTAATATGATTAACACAAAGTAAA
TTTTATATCAGTTCCTTAATCACAGACTCAGGCCTCAGGAAGAGACTTTA
TCAGTGTCTGCCCCTTCAAAATTTGGTTAGCTACATGGTACATGGGAATT
CTTCAATTCGTGTTGTAAATAATAATGGCCATTACTTTACAAATATATAT
TAGCCTGTTTTAtatcatttctttcatttttttagatTGATAACTTGACA
GTGATGGAGATGAATTTTGTGAGGACTATATTACTACCAACGTTGAATGA
AATACACAATATGCGTTGCTATGTTACACAACTCCCAGCGTCATCCTAAA
CgaatctttttcgaaatttcttttCCTGTTTTTAAAAAGCAGAATGTTAT
ACATCATGCACCAAGTGTAGAGTTATGATTGAATAGTCATATTTTGCAAT
CCAGGAAAGACTTTACTTGCCACATGTAAAATATGTGGAAAATTGGCAAG
TAAAATAATTGGAGCAAATAGAAACCTTTGGGATTGCCTATGTGCAATAA
TGGTTAATATTTATAGAAATACATGTCAAAGTGGATATTACAAGAAAGAT
CTATAAGATAGNtattatttcatttataaagCATTTATTTGGGGTGCAGG
atccatattttgatgaaatttccgtgttaagattttcagaagttttcgcc
attttgttgcaTGTAGATTCTGTTGATAAGCTAAAACCACTAAAAATTAT
TGCTTGCTTTCCTACAGTGGACCAGGGGATATTCCCAAAGCTGACGAAGT
GAGGACATTGATCAAAGATATTTGGGACATAAGGATGGCTAAATTAAGAA
AATCTATCGATCAGATGGTCATCGCTCAAGAACCGCACGCACAGGTGTGA
TTCGATCTCATGATTTTACTTAACTTCAAGATTTGAACTTTCTTTTTAAA
AGCCTTATCCAAAATACTACATCCCATCCGGATTTGGGATTGTATACAGC
CACAGTCTAATAGATTTCGGTGTTTGATATCCTtttgaataatgaaaaat
aatatatcaGAAAATCTCTCAGGTTTTGATCTCCAACTTATTTGTGCTAA
TGATGTAATATGATTAACACAAAGTAAATTTTATATCAGTTCCTTAATCA
CAGACTCAGGCCTCAGGAAGAGACTTTATCAGTGTCTGCCCCTTCAAAAT
TTGGTTAGCTACATGGTACATGGGAATTCTTCAATTCGTGTTGTAAATAA
TAATGGCCATTACTTTACAAATATATATTAGCCTGTTTTAtatcatttct
ttcatttttttagatTGATAACTTGACAGTGATGGAGATGAATTTTGTGA
GGACTATATTACTACCAACGTTGAATGAAATACACAATATGCGTTGCTAT
GTTACACAACTCCCAGCGTCATCCTAAACgaatctttttcgaaatttctt
ttCCTGTTTTTAAAAAGCAGAATGTTATACATCATGCACCAAGTGTAGAG
TTATGATTGAATAGTCATATTTTGCAATCCAGGAAAGACTTTACTTGCCA
CATGTAAAATATGTGGAAAATTGGCAAGTAAAATAATTGGAGCAAATAGA
AACCTTTGGGATTGCCTATGTGCAATAATGGTTAATATTTATAGAAATAC
ATGTCAAAGTGGATATTACAAGAAAGATCTATAAGATAGACGATGAGAAA
TGATGGATGCTGGATTTTTCACGGTTACTTTTTTGGATTGGTTATCAATT
CTTGGTATTGCTTAAATCAAAGCAAATTTGAATACAATATTTAGCTATTT
TAAAGCTAACAAATCGACTATCGCTCGGTAGCTTGTATGTACCTCCAAAG
TATTATTGTATTTAAACAGGTTTAGTTGGaactcaaaatttaatgaaatt
atatccttttcatattttttcgTACGTAAATGTTTAAATTTTAGACGTTT
AGATTCAAAAGAAGCAATCAGCCGTTTTAACATTAGTTTAACCTGGCATT
atgtttatttgaaactttggacTTGAATTTCATTGGCTTAGTTTGTTCAa
ctgatattttgaaaactaCCTGGCAATTGAATTATTTGAACcagttttaa
attttgttttcaagtttcaATACCTATAGTATCAGAGAAGGAAAACAC Coding sequence (CDS) from alignment at sc0000086:727656..741253+ >TCONS_00008567 ID=TCONS_00008567|Name=TCONS_00008567|organism=Clytia hemisphaerica|type=CDS|length=2835bp|location=Sequence derived from alignment at sc0000086:727656..741253+ (Clytia hemisphaerica)
atgaaaacattacaACCAACTTTAAGTCATGCAGAAGTAGAATTTCTTGC
TGAACACTCAGACGTCACTATATTACCAAACTTCCAAGAATCGAAATTGT
TCTTTCTAACTGGTGATTTTGGTCCTTTCAATCCTGGTATGCCAATTGAT
GTTCCTGCATGGTTAGCTGtgacgttgaaacaacaaaataaatgcAAAAT
ACACTGCCCTGATTGGTTAGACGtagATCGTCTTCAAGATTTCAAGGACG
CAGAGAACAACGAAGATGTATTTACAAAACCACCTGTTCCTCATTATAAG
GAGATCGCATCAATGCTCCTCAGATGTGGACCAGGGGATATTCCCAAAGC
TGACGAAGTGAGGACATTGATCAAAGATATTTGGGACATAAGGATGGCTA
AATTAAGAAAATCTATCGATCAGATGGTCATCGCTCAAGAACCGCACGCA
CAGatTGATAACTTGACAGTGATGGAGATGAATTTTGTGAGGACTATATT
ACTACCAACGTTGAATGAAATACACAATATGCGTTGCTATGTTACACAAC
TCCCAGCGTCATCCTAAatgaaaacattacaACCAACTTTAAGTCATGCA
GAAGTAGAATTTCTTGCTGAACACTCAGACGTCACTATATTACCAAACTT
CCAAGAATCGAAATTGTTCTTTCTAACTGGTGATTTTGGTCCTTTCAATC
CTGGTATGCCAATTGATGTTCCTGCATGGTTAGCTGtgacgttgaaacaa
caaaataaatgcAAAATACACTGCCCTGATTGGTTAGACGtagATCGTCT
TCAAGATTTCAAGGACGCAGAGAACAACGAAGATGTATTTACAAAACCAC
CTGTTCCTCATTATAAGGAGATCGCATCAATGCTCCTCAGATGTGGACCA
GGGGATATTCCCAAAGCTGACGAAGTGAGGACATTGATCAAAGATATTTG
GGACATAAGGATGGCTAAATTAAGAAAATCTATCGATCAGATGGTCATCG
CTCAAGAACCGCACGCACAGatTGATAACTTGACAGTGATGGAGATGAAT
TTTGTGAGGACTATATTACTACCAACGTTGAATGAAATACACAATATGCG
TTGCTATGTTACACAACTCCCAGCGTCATCCTAAatgaaaacattacaAC
CAACTTTAAGTCATGCAGAAGTAGAATTTCTTGCTGAACACTCAGACGTC
ACTATATTACCAAACTTCCAAGAATCGAAATTGTTCTTTCTAACTGGTGA
TTTTGGTCCTTTCAATCCTGGTATGCCAATTGATGTTCCTGCATGGTTAG
CTGtgacgttgaaacaacaaaataaatgcAAAATACACTGCCCTGATTGG
TTAGACGtagATCGTCTTCAAGATTTCAAGGACGCAGAGAACAACGAAGA
TGTATTTACAAAACCACCTGTTCCTCATTATAAGGAGATCGCATCAATGC
TCCTCAGATGTGGACCAGGGGATATTCCCAAAGCTGACGAAGTGAGGACA
TTGATCAAAGATATTTGGGACATAAGGATGGCTAAATTAAGAAAATCTAT
CGATCAGATGGTCATCGCTCAAGAACCGCACGCACAGatTGATAACTTGA
CAGTGATGGAGATGAATTTTGTGAGGACTATATTACTACCAACGTTGAAT
GAAATACACAATATGCGTTGCTATGTTACACAACTCCCAGCGTCATCCTA
AatgaaaacattacaACCAACTTTAAGTCATGCAGAAGTAGAATTTCTTG
CTGAACACTCAGACGTCACTATATTACCAAACTTCCAAGAATCGAAATTG
TTCTTTCTAACTGGTGATTTTGGTCCTTTCAATCCTGGTATGCCAATTGA
TGTTCCTGCATGGTTAGCTGtgacgttgaaacaacaaaataaatgcAAAA
TACACTGCCCTGATTGGTTAGACGtagATCGTCTTCAAGATTTCAAGGAC
GCAGAGAACAACGAAGATGTATTTACAAAACCACCTGTTCCTCATTATAA
GGAGATCGCATCAATGCTCCTCAGATGTGGACCAGGGGATATTCCCAAAG
CTGACGAAGTGAGGACATTGATCAAAGATATTTGGGACATAAGGATGGCT
AAATTAAGAAAATCTATCGATCAGATGGTCATCGCTCAAGAACCGCACGC
ACAGatTGATAACTTGACAGTGATGGAGATGAATTTTGTGAGGACTATAT
TACTACCAACGTTGAATGAAATACACAATATGCGTTGCTATGTTACACAA
CTCCCAGCGTCATCCTAAatgaaaacattacaACCAACTTTAAGTCATGC
AGAAGTAGAATTTCTTGCTGAACACTCAGACGTCACTATATTACCAAACT
TCCAAGAATCGAAATTGTTCTTTCTAACTGGTGATTTTGGTCCTTTCAAT
CCTGGTATGCCAATTGATGTTCCTGCATGGTTAGCTGtgacgttgaaaca
acaaaataaatgcAAAATACACTGCCCTGATTGGTTAGACGtagATCGTC
TTCAAGATTTCAAGGACGCAGAGAACAACGAAGATGTATTTACAAAACCA
CCTGTTCCTCATTATAAGGAGATCGCATCAATGCTCCTCAGATGTGGACC
AGGGGATATTCCCAAAGCTGACGAAGTGAGGACATTGATCAAAGATATTT
GGGACATAAGGATGGCTAAATTAAGAAAATCTATCGATCAGATGGTCATC
GCTCAAGAACCGCACGCACAGatTGATAACTTGACAGTGATGGAGATGAA
TTTTGTGAGGACTATATTACTACCAACGTTGAATGAAATACACAATATGC
GTTGCTATGTTACACAACTCCCAGCGTCATCCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008567-exon-sc0000086-1491911889:727656..727704 | TCONS_00008567-exon-sc0000086-1491911889:727656..727704 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1510915933:727656..727704 | TCONS_00008567-exon-sc0000086-1510915933:727656..727704 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1575043694:727656..727704 | TCONS_00008567-exon-sc0000086-1575043694:727656..727704 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1491911889:737454..737586 | TCONS_00008567-exon-sc0000086-1491911889:737454..737586 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1510915933:737454..737586 | TCONS_00008567-exon-sc0000086-1510915933:737454..737586 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1575043694:737454..737586 | TCONS_00008567-exon-sc0000086-1575043694:737454..737586 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1491911889:737918..738032 | TCONS_00008567-exon-sc0000086-1491911889:737918..738032 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1510915933:737918..738032 | TCONS_00008567-exon-sc0000086-1510915933:737918..738032 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1575043694:737918..738032 | TCONS_00008567-exon-sc0000086-1575043694:737918..738032 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1491911889:738216..738315 | TCONS_00008567-exon-sc0000086-1491911889:738216..738315 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1510915933:738216..738315 | TCONS_00008567-exon-sc0000086-1510915933:738216..738315 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1575043694:738216..738315 | TCONS_00008567-exon-sc0000086-1575043694:738216..738315 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1491911889:739873..739999 | TCONS_00008567-exon-sc0000086-1491911889:739873..739999 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1510915933:739873..739999 | TCONS_00008567-exon-sc0000086-1510915933:739873..739999 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1575043694:739873..739999 | TCONS_00008567-exon-sc0000086-1575043694:739873..739999 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1491911889:740419..741253 | TCONS_00008567-exon-sc0000086-1491911889:740419..741253 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1510915933:740419..741253 | TCONS_00008567-exon-sc0000086-1510915933:740419..741253 | Clytia hemisphaerica | exon |
| TCONS_00008567-exon-sc0000086-1575043694:740419..741253 | TCONS_00008567-exon-sc0000086-1575043694:740419..741253 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086 | supercontig | sc0000086:727656..741253 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006260 |
DNA replication |
| cellular_component |
GO:0005634 |
nucleus |
Blast
BLAST of TCONS_00008567 vs. Swiss-Prot (Human)
Match: PSF2 (DNA replication complex GINS protein PSF2 OS=Homo sapiens GN=GINS2 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.037e-59 Identity = 88/177 (49.72%), Postives = 124/177 (70.06%), Query Frame = 3
Query: 102 AEVEFLAEHSDVTILPNFQESKLFFLTGDFGPFNPGMPIDVPAWLAVTLKQQNKCKIHCPDWLDVDRLQDFKDAENNEDVFTKPPVPHYKEIASMLLRCGPGDIPKADEVRTLIKDIWDIRMAKLRKSIDQMVIAQEPHAQIDNLTVMEMNFVRTILLPTLNEIHNMRCYVTQLPAS 632
AEVEFLAE VTI+PNF K++ + GD GPFNPG+P++VP WLA+ LKQ+ KC++ P+W+DV++L+ +D E E+ FT P P+Y E+ +LL +IPKADE+RTL+KD+WD R+AKLR S D V QE HA++DNLT+ME+N T L LN ++ +R + L ++
Sbjct: 4 AEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLRTNLQPLEST 180
The following BLAST results are available for this feature:
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