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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008564 ID=TCONS_00008564|Name=TCONS_00008564|organism=Clytia hemisphaerica|type=transcript|length=342bp
TTTCCAGCGCTAAAAATTGAGCTTGAATTGTATCGGCAACATGGTTCCTT
TCTTTAACGTATCCCTGACATCTAGCTTGTAATTCTTTAACCGCAACATT
CAGCTTCCTTTTATTCTCGTTTTTCACCTTGATAATATTTTCGCACGCTT
CAATTTCTTTACGGCTATGTGTGCAGCTTTTGATTTTCTCTGACTGGTCC
AAGATTTTTCGATGTAGCTCTTGAtcgatggaacagcaatttatGCATTG
GTATTTTCGATAGCCTTTATTCAGGAACATTTGTATTTGGTAGGATGGTA
GTCCTGTGCATGCATAATGCAGTGTTCGTTGACATTTATGAC Run BLAST on NCBI transcript from alignment at sc0000086:712904..714068+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008564 ID=TCONS_00008564|Name=TCONS_00008564|organism=Clytia hemisphaerica|type=transcript|length=1165bp|location=Sequence derived from alignment at sc0000086:712904..714068+ (Clytia hemisphaerica)
TTTCCAGCGCTAAAAATTGAGCTTGAATTGTATCGGCAACATGGTTCCTT
TCTTTAACGTATCCCTGACATCTAGCTTGTAATTCTTTAACCGCAACATT
CAGCTTCCTTTTATTCTCGTTGTTCACCTTGATAATATTTTCGCACGCTT
CAATTTCTTTATGGCTATGTGTCcaaccgtgaaaagcacagctcaaaatc
gtatatttacgctgtgccgacgaatcgagattctattcatcgcgcaatca
gcgaagacaaaagtaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtattatttcgattcaat
taaagtgacatttccataattaaaagtttagtaattactgttatacattt
ggggatcatgtaaaagatttctttcgaaataaactcgtttcaactacact
tggaggtttctggggaattcgtaaatagtaagctgcatactgatacagtc
tgctagacattaatatggtaatatttgctctccATCTTTGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCTCGTTTTTCAC
CTTGATAATATTTTCGCACGCTTCAATTTCTTTACGGCTATGTGTGCAGC
TTTTGATTTTCTCTGACTGGTCCAAGATTTTTCGATGTAGCTCTTGAtcg
atggaacagcaatttatGCATTGGTATTTTCGATAGCCTTTATTCAGGAA
CATTTGTATTTGGTAGGATGGTAGTCCTGTGCATGCATAATGCAGTGTTC
GTTGACATTTATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008564-exon-sc0000086-1491911889:712904..713015 | TCONS_00008564-exon-sc0000086-1491911889:712904..713015 | Clytia hemisphaerica | exon |
| TCONS_00008564-exon-sc0000086-1510915933:712904..713015 | TCONS_00008564-exon-sc0000086-1510915933:712904..713015 | Clytia hemisphaerica | exon |
| TCONS_00008564-exon-sc0000086-1575043694:712904..713015 | TCONS_00008564-exon-sc0000086-1575043694:712904..713015 | Clytia hemisphaerica | exon |
| TCONS_00008564-exon-sc0000086-1491911889:713839..714068 | TCONS_00008564-exon-sc0000086-1491911889:713839..714068 | Clytia hemisphaerica | exon |
| TCONS_00008564-exon-sc0000086-1510915933:713839..714068 | TCONS_00008564-exon-sc0000086-1510915933:713839..714068 | Clytia hemisphaerica | exon |
| TCONS_00008564-exon-sc0000086-1575043694:713839..714068 | TCONS_00008564-exon-sc0000086-1575043694:713839..714068 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086 | supercontig | sc0000086:712904..714068 + |
Blast
The following BLAST results are available for this feature:
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