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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008523 ID=TCONS_00008523|Name=TCONS_00008523|organism=Clytia hemisphaerica|type=transcript|length=1461bp
gggAAATTACAATAAATGTCATTGGAGTTATGACAACAACATTAGAAGTC
TTCTGACACAACATTACAAATGAAATATGAGCTCTTTTCTAAGAGGTAAT
TACGATGCAGGGATCAAAAGAATAAGAGAAGTGTTTGAATGTAAttcctt
gaaattttttgactttatatCATAGAGTCTAGCACAGTTAGATTACATTT
GAATTCAAGTAGGAAATGTAAGACGACTGTagaatattcaaaacaaacaa
accgtTCATATTTGAATTTGTCATCAGTTAAAGGGGGATAAAGTACAGCA
CTGGTAATATCCTACAACCTGGACGAGCGTTTGAGAAGTAGTTTTCAGAA
GGATGAACAAGTCAAGAGGTGCCGATTGCTTGTCAAAACTTGTCCCTCAT
CCACTCATACTAAACATTATAACATGTATTTTATCAGTGGGGATGAGTAT
TTTTGGAACCGTTGGTAACTCCCTTATCATTTGGTTGGTGATGAAAGACC
CTTTGAAGAAGCTAGGAACACCTTTCAATTACTTTCTGGTGAATCTAGCT
ATCAGTGATTTGATTATCGCGTTTGTGACGATGCCGATCTCGTTTTATGT
ACATTACCAAGAGATTCATCATGGCTTCATCTCTCCAGTGTGGTCAGAGA
TACTAGCTATGTCTTACTTCATATCGGCGCATGTAAGCTTTTTAAGTTTA
TTAGCACTATCAATGGATCGATATATAGCAATTGTGAGGCCAATAAAATA
CAGATTGTACTTAAGCTGGTCTAGATGCATTAAAGTGTCTGTAGTGGTCT
GGATTTTGTCATTAACACTCCCATTCGCTTATTTCAAGATCGGCTACGTA
CCATACTTAATGTATTACGGGAATACGTCTATACTGATTGGTTTTATCAT
CATGATAACTCTTTACGTAAGAATACAAAAGTTCTTACATAATCATCACG
AACAACGTCTATCATTTAACGCTACGAATAGTCTACGCCGTGAAGCAGCC
TCCCGTCAGATTGAACGTAAAGTGACTGATGTATTTTTCACGTTAACGGC
GTTGTTTTTTGTGACGTACGTAATCGCGGCACTGATAAACGCTGTAGTAC
ATCTTTGTCAAACCTGCTCATGTGACACATCTCATATTTTGAGAGATGCT
CAATTTCTGTTGGTAGTTCTAAACAGTTGTGTTAATCCTTGGATATGCAC
CATTCGATTGAGACAGTATCGTGAGTCGATTAAGGACATGTGGTCAAGGA
ACCGAATCACATTTCCATGTTTAGATTCTGGTGACGTCATTGAAAACAAT
TTACTTGAACCATTGGTTGTAGACGATGGAACACAAATTGACGAGGATGA
TTCAGAGTAACATATTCTCCGAGTCAGAGTGTCGGATCAGTCTTCTCTGT
ATACCAGGAAtggaattttattttgatattatttaaCCTGGAATAAAAAA
CATATGAAAAC Run BLAST on NCBI protein sequence of TCONS_00008523-protein >TCONS_00008523-protein ID=TCONS_00008523-protein|Name=TCONS_00008523-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MNKSRGADCLSKLVPHPLILNIITCILSVGMSIFGTVGNSLIIWLVMKDP
LKKLGTPFNYFLVNLAISDLIIAFVTMPISFYVHYQEIHHGFISPVWSEI
LAMSYFISAHVSFLSLLALSMDRYIAIVRPIKYRLYLSWSRCIKVSVVVW
ILSLTLPFAYFKIGYVPYLMYYGNTSILIGFIIMITLYVRIQKFLHNHHE
QRLSFNATNSLRREAASRQIERKVTDVFFTLTALFFVTYVIAALINAVVH
LCQTCSCDTSHILRDAQFLLVVLNSCVNPWICTIRLRQYRESIKDMWSRN
RITFPCLDSGDVIENNLLEPLVVDDGTQIDEDDSE Run BLAST on NCBI transcript from alignment at sc0000085:668144..669604 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008523 ID=TCONS_00008523|Name=TCONS_00008523|organism=Clytia hemisphaerica|type=transcript|length=1461bp|location=Sequence derived from alignment at sc0000085:668144..669604 (Clytia hemisphaerica)
GTTTTCATATGTTTTTTATTCCAGGttaaataatatcaaaataaaattcc
aTTCCTGGTATACAGAGAAGACTGATCCGACACTCTGACTCGGAGAATAT
GTTACTCTGAATCATCCTCGTCAATTTGTGTTCCATCGTCTACAACCAAT
GGTTCAAGTAAATTGTTTTCAATGACGTCACCAGAATCTAAACATGGAAA
TGTGATTCGGTTCCTTGACCACATGTCCTTAATCGACTCACGATACTGTC
TCAATCGAATGGTGCATATCCAAGGATTAACACAACTGTTTAGAACTACC
AACAGAAATTGAGCATCTCTCAAAATATGAGATGTGTCACATGAGCAGGT
TTGACAAAGATGTACTACAGCGTTTATCAGTGCCGCGATTACGTACGTCA
CAAAAAACAACGCCGTTAACGTGAAAAATACATCAGTCACTTTACGTTCA
ATCTGACGGGAGGCTGCTTCACGGCGTAGACTATTCGTAGCGTTAAATGA
TAGACGTTGTTCGTGATGATTATGTAAGAACTTTTGTATTCTTACGTAAA
GAGTTATCATGATGATAAAACCAATCAGTATAGACGTATTCCCGTAATAC
ATTAAGTATGGTACGTAGCCGATCTTGAAATAAGCGAATGGGAGTGTTAA
TGACAAAATCCAGACCACTACAGACACTTTAATGCATCTAGACCAGCTTA
AGTACAATCTGTATTTTATTGGCCTCACAATTGCTATATATCGATCCATT
GATAGTGCTAATAAACTTAAAAAGCTTACATGCGCCGATATGAAGTAAGA
CATAGCTAGTATCTCTGACCACACTGGAGAGATGAAGCCATGATGAATCT
CTTGGTAATGTACATAAAACGAGATCGGCATCGTCACAAACGCGATAATC
AAATCACTGATAGCTAGATTCACCAGAAAGTAATTGAAAGGTGTTCCTAG
CTTCTTCAAAGGGTCTTTCATCACCAACCAAATGATAAGGGAGTTACCAA
CGGTTCCAAAAATACTCATCCCCACTGATAAAATACATGTTATAATGTTT
AGTATGAGTGGATGAGGGACAAGTTTTGACAAGCAATCGGCACCTCTTGA
CTTGTTCATCCTTCTGAAAACTACTTCTCAAACGCTCGTCCAGGTTGTAG
GATATTACCAGTGCTGTACTTTATCCCCCTTTAACTGATGACAAATTCAA
ATATGAacggtttgtttgttttgaatattctACAGTCGTCTTACATTTCC
TACTTGAATTCAAATGTAATCTAACTGTGCTAGACTCTATGatataaagt
caaaaaatttcaaggaaTTACATTCAAACACTTCTCTTATTCTTTTGATC
CCTGCATCGTAATTACCTCTTAGAAAAGAGCTCATATTTCATTTGTAATG
TTGTGTCAGAAGACTTCTAATGTTGTTGTCATAACTCCAATGACATTTAT
TGTAATTTccc Coding sequence (CDS) from alignment at sc0000085:668144..669604 >TCONS_00008523 ID=TCONS_00008523|Name=TCONS_00008523|organism=Clytia hemisphaerica|type=CDS|length=1008bp|location=Sequence derived from alignment at sc0000085:668144..669604 (Clytia hemisphaerica)
TTACTCTGAATCATCCTCGTCAATTTGTGTTCCATCGTCTACAACCAATG
GTTCAAGTAAATTGTTTTCAATGACGTCACCAGAATCTAAACATGGAAAT
GTGATTCGGTTCCTTGACCACATGTCCTTAATCGACTCACGATACTGTCT
CAATCGAATGGTGCATATCCAAGGATTAACACAACTGTTTAGAACTACCA
ACAGAAATTGAGCATCTCTCAAAATATGAGATGTGTCACATGAGCAGGTT
TGACAAAGATGTACTACAGCGTTTATCAGTGCCGCGATTACGTACGTCAC
AAAAAACAACGCCGTTAACGTGAAAAATACATCAGTCACTTTACGTTCAA
TCTGACGGGAGGCTGCTTCACGGCGTAGACTATTCGTAGCGTTAAATGAT
AGACGTTGTTCGTGATGATTATGTAAGAACTTTTGTATTCTTACGTAAAG
AGTTATCATGATGATAAAACCAATCAGTATAGACGTATTCCCGTAATACA
TTAAGTATGGTACGTAGCCGATCTTGAAATAAGCGAATGGGAGTGTTAAT
GACAAAATCCAGACCACTACAGACACTTTAATGCATCTAGACCAGCTTAA
GTACAATCTGTATTTTATTGGCCTCACAATTGCTATATATCGATCCATTG
ATAGTGCTAATAAACTTAAAAAGCTTACATGCGCCGATATGAAGTAAGAC
ATAGCTAGTATCTCTGACCACACTGGAGAGATGAAGCCATGATGAATCTC
TTGGTAATGTACATAAAACGAGATCGGCATCGTCACAAACGCGATAATCA
AATCACTGATAGCTAGATTCACCAGAAAGTAATTGAAAGGTGTTCCTAGC
TTCTTCAAAGGGTCTTTCATCACCAACCAAATGATAAGGGAGTTACCAAC
GGTTCCAAAAATACTCATCCCCACTGATAAAATACATGTTATAATGTTTA
GTATGAGTGGATGAGGGACAAGTTTTGACAAGCAATCGGCACCTCTTGAC
TTGTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008523-exon-sc0000085-1491911889:668144..669604 | TCONS_00008523-exon-sc0000085-1491911889:668144..669604 | Clytia hemisphaerica | exon |
| TCONS_00008523-exon-sc0000085-1510915933:668144..669604 | TCONS_00008523-exon-sc0000085-1510915933:668144..669604 | Clytia hemisphaerica | exon |
| TCONS_00008523-exon-sc0000085-1575043694:668144..669604 | TCONS_00008523-exon-sc0000085-1575043694:668144..669604 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000085 | supercontig | sc0000085:668144..669604 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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