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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008500 ID=TCONS_00008500|Name=TCONS_00008500|organism=Clytia hemisphaerica|type=transcript|length=1008bp gtttttttttccagaaCGTTTACGAAATATATGCTTGCTTACCAAATATT CTTCCTTTCAGGTATATTGATGAGTTTTTAAAAGAGATTACTGGACGCAT TTGGTAATGAATTCCCTGAAGATTCTAACGTTGTCAAAATCTCTGAAATT GTAGTCCAACCTTCAAAAGAAGCTTTTCTTTTCGGTccactttatttatt ttttctaatattATTTAAGGATGGGTAGGGAGAGAATGTGTTGATTTAGC TGACTTTGAAGATATTTGATTTATCTGCTGGACTACAGTGAGACTcgtga tttttcattttcttttctaatATTCAGAATTGAAATTAAAAGTTCTTCGC GAGATTAATCTTCACACTTTCTTGATTAGTGATTTAGACAGAGTCTCACA CTTTGATTAGCATCCAACCATTAACCAGCTCAGTAAAGAAATGTGCCAat catttttctaatttaagGCCAGTACCTGAAATTATATTCAAATGAAAGTC GCAAATTTGATGATTTGTTTGGATTCAAGGGTTGAAtatatgaaaaaaga aaattatgttttgaAGGATTATATATCGTATTTCGaagtctcatcaaaaa ataGCTCAATGTTTACATATCTCATTTACACTTACTGACATTTTAAAATT AATACTCTTGACTGATGAatattcttttacaaaaaaggtttgtttacGCA TGCGTACAAGAAGCGGGACAAAATGCGTTTTGTATGGAGACTTAGGAACA CTTCAAATTAAGACCACGAAGTCTCTTTTTGAAATCGCTTTAAATACAAA ATACAAATAGCTCTCCAGCTAATATTGTTGTTCAAATTTTGTAAGCTTTT GGATTACTAGATACTCAATGCACGCGCATAcgtcaaattttagaaaaact tttgCACTTTTTTTCGTCTTAGGACAGTTTTTACGCAAGTCATATTTTTA ATGAAGAACTTTATTGCAaacattcaaagaaaaaattttgaagtgaAAAT CTAACAAG Run BLAST on NCBI transcript from alignment at sc0000085:163794..164801 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008500 ID=TCONS_00008500|Name=TCONS_00008500|organism=Clytia hemisphaerica|type=transcript|length=1008bp|location=Sequence derived from alignment at sc0000085:163794..164801 (Clytia hemisphaerica) CTTGTTAGATTTtcacttcaaaattttttctttgaatgttTGCAATAAAG
TTCTTCATTAAAAATATGACTTGCGTAAAAACTGTCCTAAGACGAAAAAA
AGTGcaaaagtttttctaaaatttgacgTATGCGCGTGCATTGAGTATCT
AGTAATCCAAAAGCTTACAAAATTTGAACAACAATATTAGCTGGAGAGCT
ATTTGTATTTTGTATTTAAAGCGATTTCAAAAAGAGACTTCGTGGTCTTA
ATTTGAAGTGTTCCTAAGTCTCCATACAAAACGCATTTTGTCCCGCTTCT
TGTACGCATGCgtaaacaaaccttttttgtaaaagaatatTCATCAGTCA
AGAGTATTAATTTTAAAATGTCAGTAAGTGTAAATGAGATATGTAAACAT
TGAGCtattttttgatgagacttCGAAATACGATATATAATCCTtcaaaa
cataattttcttttttcatataTTCAACCCTTGAATCCAAACAAATCATC
AAATTTGCGACTTTCATTTGAATATAATTTCAGGTACTGGCcttaaatta
gaaaaatgatTGGCACATTTCTTTACTGAGCTGGTTAATGGTTGGATGCT
AATCAAAGTGTGAGACTCTGTCTAAATCACTAATCAAGAAAGTGTGAAGA
TTAATCTCGCGAAGAACTTTTAATTTCAATTCTGAATattagaaaagaaa
atgaaaaatcacgAGTCTCACTGTAGTCCAGCAGATAAATCAAATATCTT
CAAAGTCAGCTAAATCAACACATTCTCTCCCTACCCATCCTTAAATaata
ttagaaaaaataaataaagtggACCGAAAAGAAAAGCTTCTTTTGAAGGT
TGGACTACAATTTCAGAGATTTTGACAACGTTAGAATCTTCAGGGAATTC
ATTACCAAATGCGTCCAGTAATCTCTTTTAAAAACTCATCAATATACCTG
AAAGGAAGAATATTTGGTAAGCAAGCATATATTTCGTAAACGttctggaa
aaaaaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00008500-exon-sc0000085-1491911889:163794..164801 | TCONS_00008500-exon-sc0000085-1491911889:163794..164801 | Clytia hemisphaerica | exon |
TCONS_00008500-exon-sc0000085-1510915933:163794..164801 | TCONS_00008500-exon-sc0000085-1510915933:163794..164801 | Clytia hemisphaerica | exon |
TCONS_00008500-exon-sc0000085-1575043694:163794..164801 | TCONS_00008500-exon-sc0000085-1575043694:163794..164801 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000085 | supercontig | sc0000085:163794..164801 . |
Blast
The following BLAST results are available for this feature:
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