TCONS_00008487 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008487
Unique NameTCONS_00008487
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5942

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008487 ID=TCONS_00008487|Name=TCONS_00008487|organism=Clytia hemisphaerica|type=transcript|length=5942bp
ttttcttttaataaatttGACAATAGGTTCGAGGGTGAGGTCTGACCACT
GCAATGGAGGGTAAATATTAATTATCTCCACTTATTATAGTGTGAAAGTG
AACTTCCCCGGGGACGTTTATGTGTGGGATTTAATAAAGGTTATTATTAA
CGCCTATGCacaaaatagtttgatcaaagGTGATATAAAGTTCTGATTCT
TGATACATTGATCAAAATCAAGTATTAATCGTTACAGACGGGTTACAGTA
TTGGAAAATCTCAACTTGAAAAAACTGCTGGTTCGTTTTGATAAAAGGTT
ATAACTATGTTGGGCCTTGCCCGAATTTTACTACTTTTTGCTTGTTTGGC
ATCTGTTAATGGTGCGCCAAAACAACATAAACGTCATTTTCATCAGCACC
ATGAGAATTCAAAACGACATCTTCATCAACATAAAGACTCAAAACTGGTG
AATGATCCTTTAACTGGCCCTTCTTGCGATACATTTGTAACTTTGGACCA
TGGATGGAGCCAGGGCCAACAAGCTAAAATGGAATTCACTGTCCCTCAAG
CTGTTAATGGATGGAAAATCACgGTGGAATTTTCACGCAGCCCGATAAGG
AACTTTCAGCTGCAGAATACAAGGCAAGCAGGAAATTATCGTAAATGTAG
ATTCACATTCACAAACTACCAGTGGAACTCAAAGATAAACGCCGATCAAA
AAATTACATATAATTTCATGTACGGCTTCTCTGGAAATCCAAAACCGAAA
ATCGCTTACGTTAAATTCGAAAGTGGTTCCTTTTCAATGACCTGTGGAGC
GCCTGCTTGCCCAGCTCCAACGCAACCGCCTACTTTAGCTCCGGGCGTCA
CCACCCCTATTAAAACAACGACACCCAGACCAACCCTTCCGCCACTTCAG
GGTGCTTGCTCAAATTTCATTAGAATAAAACAAAGCAATCCTGGTAGTGA
GTTTGGTGTGATCAGGTTTTCTCTTCCAACATCTATCGCTACTTGGACAT
TGAAGGTTGGTTTCTCAGAGACAGTTCAAAACTTCCAAGTCCAACGTGGT
GCTAACATGTTGGAAGTTGAAAGACCATGCACAGAAGTCACGTTATACAA
TTACGtcaaagctggcaacagacctGATAACGCTGACAAACCTATGCGCT
TCCCATACGTTTTACATTATAATCAGAACGCTGCCAAACCAATCATTACT
TATTTTGAGATCAGTGATGGTTCAAATACTTACATGTGTGGAACTCAACC
CTCGTGTCCCACTACTACAACGACCACAATTACAACGACCACTGGACCTT
CAACGACTGAAGGAGAACCTACTACTGCTGGCTCCACTACACCTATTACT
GAAACCACTGTGACACCTGAAGCGCCACCACAGCCGCTTTCTGGTGACGA
TTGCGCCGCTTTCTTGAAGAATGTAGAAAATGGGTTCAGTGACGAGCAAG
GAACCATCGAGTTCTTAGTACCTCAACAATCCAATGAATGGGTCTTTAAT
GTCGGTTTTACACCAGCAATGCTTCCAAACACATTTGACGTTTTCGATCG
TGCCGTAAAACAACAATCAGCAGACAGATGTTTTTATGAATTCACCAACG
CTGCAGAGGACACTTATGAAGCTAATAGCCTCTTCAGTAAGCAATACAGA
TCAGGTTTCGACGCAGCTGTTGGAGAATCTCAGATTGAGTACATCAGTTT
TTCATCAGGAGACTTCCAAATGGAGTGTGGATCTAACGATTGTCCTGTCC
TGACAACACCTACTGCTGGTCCTACCACCATTGCTCCGAACACCACTACC
ACCCCTCTAGTCACCTCTCCACCTCTTGCAGGTGCCACATGTGAACCTTA
CGTTGAATTCACACAAGAAAACCTTGGACAAACATTTGGGAATATTCGAA
TCACAACAACCGAAGATTTGActgaatttcaaattattGTTGGGTTCAGT
TCTTCGACGACTGGTTTCAACATTATGAGTGGAGTGAACCGTCTCACCTC
ATCAGAAACATGTCCAGGATTCAACTACGTTTTTCAAAGCATTCCAAATG
GAGAGATTCTCGCTggaaccactttcgttttcccatTCTCTTTATCATTC
GATCAAAACAGTGCAGACAAGCCAGTGATTGAATACATCAAATTCGCAAA
TGATTCGTGCGGCACTGAACCAGTCTGCCCAACAACCACAACCGCAACTA
CAACTACAACTAATACCACTCCGAACCCATCAACTCAAGAACCATCGGAG
ACCACGGAAGTATCCACCCAAGAGCCATCAGAAACTACAGAACTCCCTGC
TGAAACCACTCAAGAGCCATCGGAGACTACTGAACTGACTGCTGGAACCA
CCCAAGAGCCATCGGAGACTACTGAATCAGTCAGTACAGAAGAAATTACT
AACTCTCCAACTGAACCACCAACCGAGCCACCCACTGAACCGCCAACCGA
ACCACCCACTGAACCGCCAACCGAGCCACCCACTGAACCGGCCACCCAAC
CACCCACTCAACCACCAACCGAGCCACCCACTGAACCGCCAACCGAGCCA
CCCACAGAAACGCCCACCGAGCCACCCACTGAACCACCAACTGAGGCGCC
AACCGAGCCACCCACTGAACCACCAACCGAGCCGCCCACTGAGGCGCCCA
CGGAAGCAGAGACAACAGCTGCACCAACATGCAGCACACCTCACGATTAC
AGCGACGTCCTTGGTAAATCAATCCTCTTCTACAAAGCACAGCGATCGGG
AACCCTCTCTGATAACGATATCCCATGGAGACGCAACTCCTTTGAAAACG
ACGGTCAAGGACAAGGTCATAATCTATCTGGTGGTTACTTCGACGCTGGA
GATTATGTCAAGTTCAACTTCCCGATGGCTGCAGCAACGACTGTCTTAGC
TTGGGGTCTAGTAGACTTTGCTGATGGGTACAAATTCGCTGGTAAATATG
AGGACGGACTGGCGACACTGAAATGGGCAACTGATTACTTCATCAAATGT
CATACTGCAACGAACGAGCTGTACGGCCAATGTGGAATCGGTGGAGAAGA
CCATGCAGTCTGGGGACGAGCAGACGAATATTACACAAACTCTCCTGGTA
AAGCTAACCCAAGACCATGCTACAAAGTCGATGCAAATAATCCAGGTTCT
GATCTAGCCGGTGAAACATCAGCTGCACTAGCCGCTACCTCTATTGCTTT
TAAGAAATCAAACCCAGGCTATGCTGCTACACTCATACAACACGCTAAAG
AGTTATACACATTCGCTAAAACCAACCAAGGAGTTTATTCCTCAAGTATT
CCAGACGCTCAAACCTTCTACAACTCCTTCAGTGGTTACAAGGATGAATT
AGCATGGAGTGCTGCTTGGCTTTACAAGGCTACAGAAGAGCAACAATATC
TGGCTGACGCTGAAGGGTTCTTCAATGAAATGCAACAAAACCCTGGCGAA
TTCTCCTGGGACAACAAAGGTCGTGGTGTAGCAGCTCTCCTTTCACAGCT
CACCGGTAAAGCAGCTTATAAACAAAACGTCGATAGCTTTTGTAACCAGA
TGCAGAATAACCAGCCACGTACTCGATACGGATTGGTCTTCATACAACAA
TGGGGCTCAAACCGTCACGCAGCAAACGTTGCCTTCATTTGTCTCGCTCA
TTCAAAAGCAACCGGTCAATTCAACACATTTGGACGCGATCAAATCAATA
AACTCCTCGGAGATGAACCAGCCAATCAACGCAGTTTTGTTGTCGGTTAC
GGTTTCAACCCACCAAATCAACCTCACCATAGATCTTCATCATGCCCGAA
CCGCCCAGCACCCTGTGGGTGGAATGAATTCAATATTAACGCCCCAAATC
CCCAAGTTCTAAATGGAGCCTTAGTGGGTGGTGCTCGGTCAACAACTGAT
GTTTATCAAGATGATAGGAGAGATTATATTGAGAATGAAATTACTCTTGA
TTATAATGCAGGCTTCCAATCCGCCCTCGCCGCCCTACTTGAGCTTCAAA
AAGATGGTGATTGTGGACAGGAATAAAACATTGAAATCAGAAAAATAATA
GTTGACTACCAACCTAAATTATGAAATCCTGTTTTGTGAATATATCTTAT
TTATCTTCACTATCTATTTATTGTatcttatttttgaaattttttttttg
gataaagAATATTGTTGCTAGCAAAACTACTGCAGACTGTATCCAAATTT
CTTGTAAACGGGATCCTttgaaaagcttaaaatcaGTCCAGCCATAGCAG
CCTAAGACTAAAgatagttttaatttttgtgaaaagatGACGAAAATTCT
GTCTTTTGTCAGTTGCAACAACATATCGAAATTGCAAGAAGTGCCATCAT
GGGTATTATTTTTCAAACAGGAAGGTGGTgttaatcaaaaatgaaataga
TTCCCGATGTTgtcactctttttttttaaacaccaaCTTTTTACGACTTT
TTCACCGTGTTCCTTTCGAGAAGAATGTGCTGAATCAGGAAGcaaaaact
ggaaaaatattACAGAACCCACTACTCGTTTAATGTTGTTTCTTTATCCT
TCTTTACAAAGGAAATTGTCTATTTATCTACCATAGCCATTTTCAGAATG
TCTAAACCCAtctttcccgatcgggaaaccTACCTCCTTCCGGAATCAGA
AATCTTACTGTTTTGGGAAGTTTTCCACCTTTCCATTCGACAAATATTTC
CTGATGACGCAATACTTGCCATTTCGATGTAGTGTTGCCAACTAATTGTT
TATATACATAACTAGCAAAATTTATTGTGGAAGGTTTGTTGGGTAAGGtt
tatttttttgcctgatATTTTGACAGTCTGACCCAACTTAGGATAGCAGT
ACAGGGTGTGAAAAGAAATTCCTATTTGTAAGCAAGTGGTTCATTTTGGC
TCACTGACAATTTTATTAGACATACATTTATGTGCCAAATAAAGGTAAGg
taaataaaaagacaaaaatcagGCTTTTTTAGGCTAAGACGAGTTTCAAT
GGTTTATTTCAATAACGATTTTTTCTGTTTCAGTCCCTGAACCAAGTCGT
GAAGAACTTCACCGTCGCTTTGTAGAAAAGCATGGTACGAAACATTCGAT
TAATGGATTACCGATCTTGATCACTCTCCCTATTTTCGTGTTCGTCATCC
TCTCCATTGCTTATGTCTGGTGgaaagaaacagaaaaaaagaaagaaaaa
gaacgaCAGGAGAAAATGAATCAACAATCAATACCACTAGCCAATGTGGT
GGTTGAACCTCCAAAACCTAAAATCACAATCGATCCCGCATTATTCGAAG
GCTCTATGTGTTACCCCTCTTCATCCGAACGATCAAGTCTTAACAATCGC
TCCCATAGTGCATGCTCAGAACGAACCAATGACAATCCATCTAGTCACTG
TGGGGATGAACAGACACAGTTATTGGATgatcaagatgacgtcatcactt
ctAGTGAGAATAATATACAGGCTTGATTTAGGGAACAGTTTGAGCAAACA
ATACAGTAGGTACTATGTAAAATTTTGGATTGTCGCCCGTAAAGCCTGAG
GAACAAAAGACAAGCTTTTAAAACACAGCAGAATTCTTCTAAGACGCTGT
TTCACGAGAGCAAGAACAAGAACTGATGGATAAATTAGCTGAGCTATGAA
ATacgaaaaataaacattatagCTGATTATGAGAGGAAGTAGTGTATCta
ggtttcaatatttttcagaatttaatattttaattgCACTGATAGATATT
TATTATGCATAAACTTTTAAACAGGTTTTCAATGCACCATTagcttttat
ttaaaagaaattgtatGTTTTTGTAGCATTTTGAAGATGAAAGGTCAGTC
ATGAAATGGAAAATCGTCCTGACCCAAATAAAAGATCGATTGTTGAGACC
TGATcattaattttcgattttttattttgaaaaatatagtgc
Run BLAST on NCBI

transcript from alignment at sc0000085:614797..624675-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008487 ID=TCONS_00008487|Name=TCONS_00008487|organism=Clytia hemisphaerica|type=transcript|length=9879bp|location=Sequence derived from alignment at sc0000085:614797..624675- (Clytia hemisphaerica)
TTTTCTTTTAATAAATTTGACAATAGGTTCGAGGGTGAGGTCTGACCACT
GCAATGGAGGGTAAATATTAATTATCTCCACTTATTATAGTGTGAAAGTG
AACTTCCCCGGGGACGTTTATGTGTGGGATTTAATAAAGGTTATTATTAA
CGCCTATGCACAAAATAGTTTGATCAAAGGTGATATAAAGTTCTGATTCT
TGATACATTGATCAAAATCAAGTATTAATCGTTACAGACGGGTTACAGTA
TTGGAAAATCTCAACTTGAAAAAACTGCTGGTTCGTTTTGATAAAAGGTT
ATAACTATGTTGGGCCTTGCCCGAATTTTACTACTTTTTGCTTGTTTGGC
ATCTGTTAATGGTGCGCCAAAACAACATAAACGTCATTTTCATCAGCACC
ATGAGAATTCAAAACGACATCTTCATCAACATAAAGACTCAAAACTGGTG
AATGATCCTTTAACTGGCCCTTCTTGCGATACATTTGTAACTTTGGACCA
TGGATGGAGCCAGGGCCAACAAGCTAAAATGGAATTCACTGTCCCTCAAG
CTGTTAATGGATGGAAAATCACGGTAAAATTTTACAAATAAATTCACTAT
TAGATTTATTCAAGCACTTATGTTGTAGAATATTTGTGAGCGACTATTTT
TAGAACGTGTCCTGCTTATTTTCAAGGGACCCATACCACTATATAAACAT
GACTTTTGAAGAATTAAGATTGATTATATTCTTTCTAGGAGACTTTCTTG
GGATTGTGTTTCCTCAGATACGTATGTGACTATGTGAAGCTAAACTGACT
TTATTACTACCAGTCCAAAGTCTCCATTTGCGGTAAAAAAAATAAATAAC
TGACTTTATTACTTTGTTGATTTTTACAGGTGGAATTTTCACGCAGCCCG
ATAAGGAACTTTCAGCTGCAGAATACAAGGCAAGCAGGAAATTATCGTAA
ATGTAGATTCACATTCACAAACTACCAGTGGAACTCAAAGATAAACGCCG
ATCAAAAAATTACATATAATTTCATGTACGGCTTCTCTGGAAATCCAAAA
CCGAAAATCGCTTACGTTAAATTCGAAAGTGGTTCCTTTTCAATGACCTG
TGGAGCGCCTGCTTGCCCAGCTCCAACGCAACCGCCTACTTTAGCTCCGG
GCGTCACCACCCCTATTAAAACAACGACACCCAGACCAACCCTTCCGCCA
CTTCAGGGTGCTTGCTCAAATTTCATTAGAATAAAACAAAGCAATCCTGG
TAGTGAGTTTGGTGTGATCAGGTTTTCTCTTCCAACATCTATCGCTACTT
GGACATTGAAGGTATGACTCCTATAATTTTTCTTACCTTATCTCTTTTCT
GTGAATTCATTTCTAGGTATTCTAAATAGAAAAGGGAGTTTGAACTGAAT
AAGTTTTGCATGAGTTTAAAGGGAAATTTCATTCTGCTTAGATGTCCAAG
AAGAAAGTTTTTCGGCTGCGAATGATTCGAAACAGTCATGTATGAAACTA
AAAATCTATGACTGTTATTTGCGACAGAATTAAAAAAAATTTATCCTATA
AGATATAGGAATCTTTTTTAGAGGACACCAAGAGAATCAAAGTCTTATCT
ACTTATATACAGTAAAAGTTGCAATCTTTCCTTTCCATTGTTATCTAACT
CTTTTCTTTTCTCACTTTAGGTTGGTTTCTCAGAGACAGTTCAAAACTTC
CAAGTCCAACGTGGTGCTAACATGTTGGAAGTTGAAAGACCATGCACAGA
AGTCACGTTATACAATTACGTCAAAGCTGGCAACAGACCTGATAACGCTG
ACAAACCTATGCGCTTCCCATACGTTTTACATTATAATCAGAACGCTGCC
AAACCAATCATTACTTATTTTGAGATCAGTGATGGTTCAAATACTTACAT
GTGTGGAACTCAACCCTCGTGTCCCACTACTACAACGACCACAATTACAA
CGACCACTGGACCTTCAACGACTGAAGGAGAACCTACTACTGCTGTATGT
GTTTCTTTATTTATTTCTTGCAGACTCATTCGAAATCTTTTTGTTGTTTT
CTAATCTTAAAATTACTTTAGAGAAAGTTTATGTTAATTTTGTGTACGCC
TAAAGTAATCGGCTATTTTACCATCTGCTATCATTCTCAAAGATATGAAA
ACTGAAGATGCTTTTTTCAATCCGTCACTTAGCTCATATTTGTTCGATAA
CTTAAGATAGTATAAACTGGAGAAAAAAATTTATTTTTGCTGAAAAAGAA
ATTCCCTATTATACTTTTTTCAGGGCTCCACTACACCTATTACTGAAACC
ACTGTGACACCTGAAGCGCCACCACAGCCGCTTTCTGGTGACGATTGCGC
CGCTTTCTTGAAGAATGTAGAAAATGGGTTCAGTGACGAGCAAGGAACCA
TCGAGTTCTTAGTACCTCAACAATCCAATGAATGGGTCTTTAATGTACGT
GCTTCACAGTAATTCAATTACGTTTTAGATAGCTCGTTTTCAGAATCTGA
CAGTCCAACTGTTTACTTTTGAGGCGGTGGGCATAGGTAACAGCCACAAG
TTCCTACACTAACTNGCTCGTTTTCAAAATCTGACAGTCCAACTGTTTAG
TTTTGAGGCGGTGGACATAGGTAACAGCCACAAGCTCCTACACCAGCTTC
ACTTATGATGATAGGCTGTTGAGTCATAAATGAATTGAAAGTATATTTCA
GCTTTGAATTTCTAAGAACTGTCGCCTTCTATCTTCTTTTAGATCTTAGT
ATTACCCCTTCTTAACAAAACCTGGATATCCCTGCAATATATTTTCATAA
AATCTTTCCCAGGTCGGTTTTACACCAGCAATGCTTCCAAACACATTTGA
CGTTTTCGATCGTGCCGTAAAACAACAATCAGCAGACAGATGTTTTTATG
AATTCACCAACGCTGCAGAGGACACTTATGAAGCTAATAGCCTCTTCAGT
AAGCAATACAGATCAGGTTTCGACGCAGCTGTTGGAGAATCTCAGATTGA
GTACATCAGTTTTTCATCAGGAGACTTCCAAATGGAGTGTGGATCTAACG
ATTGTCCTGTCCTGACAACACCTACTGCTGGTCCTACCACCATTGCTCCG
AACACCACTACCACCCCTCTAGTCACCTCTCCACCTCTTGCAGGTGCCAC
ATGTGAACCTTACGTTGAATTCACACAAGAAAACCTTGGACAAACATTTG
GGAATATTCGAATCACAACAACCGAAGATTTGACTGAATTTCAAATTATT
GTAAGTTTACCTTAATCTTTTAACCTCAAGCTATGCCATTTCTTTATTCA
GACCAGCAATGTAATATCAGACGTATCAAGCTTTTTCTATTCATAACTTT
TAATATCTTCTCATACTACGCAACGTTTATTTATTTTACAAAGTGGTACC
AAAATTGCATGATAGCCATTCAACAAAATTGTTAATATGTGCCCCGTAAG
CAAATATTACTCGTCGAATATTTTGAAAATGATTTATAAACAGATTTATA
ATGTAAATGAAATCATATCATATTGTTTCAGGTTGGGTTCAGTTCTTCGA
CGACTGGTTTCAACATTAAAAGTGGAGTGAACCGTTNAGCAAATATTACT
CGTCGAATATTTTGAAAATGATTTATAAACAGATTTATAATGTAAATGAA
ATCATATCATATTGTTTCAGGTTGGGTTCAGTTCTTCGACGACTGGTTTC
AACATTATGAGTGGAGTGAACCGTCTCACCTCATCAGAAACATGTCCAGG
ATTCAACTACGTTTTTCAAAGCATTCCAAATGGAGAGATTCTCGCTGGAA
CCACTTTCGTTTTCCCATTCTCTTTATCATTCGATCAAAACAGTGCAGAC
AAGCCAGTGATTGAATACATCAAATTCGCAAATGATTCGTGCGGCACTGA
ACCAGTCTGCCCAACAACCACAACCGCAACTACAACTACAACTAATACCA
CTCCGAACCCATCAACTCAAGAACCATCGGAGACCACGGAAGTATCCACC
CAAGAGCCATCAGAAACTACAGAACTCCCTGCTGAAACCACTCAAGAGCC
ATCGGAGACTACTGAACTGACTGCTGGAACCACCCAAGAGCCATCGGAGA
CTACTGAATCAGTCAGTACAGAAGAAATTACTAACTCTCCAACTGAACCA
CCAACCGAGCCACCCACTGAACCGCCAACCGAACCACCCACTGAACCGCC
AACCGAGCCACCCACTGAACCGGCCACCCAACCACCCACTCAACCACCAA
CCGAGCCACCCACTGAACCGCCAACCGAGCCACCCACAGAAACGCCCACC
GAGCCACCCACTGAACCACCAACTGAGGCGCCAACCGAGCCACCCACTGA
ACCACCAACCGAGCCGCCCACTGAGGCGCCCACGGAAGCAGAGACAACAG
CTGCACCAACATGCAGCACACCTCACGATTACAGCGACGTCCTTGGTAAA
TCAATCCTCTTCTACAAAGCACAGCGATCGGGAACCCTCTCTGATAACGA
TATCCCATGGAGACGCAACTCCTTTGAAAACGACGGTCAAGGACAAGGTC
ATAATCTATCTGGTGGTTACTTCGACGCTGGAGATTATGTCAAGTTCAAC
TTCCCGATGGCTGCAGCAACGACTGTCTTAGCTTGGGGTCTAGTAGACTT
TGCTGATGGGTACAAATTCGCTGGTAAATATGAGGACGGACTGGCGACAC
TGAAATGGGCAACTGATTACTTCATCAAATGTCATACTGGTAAGGAATGG
AAAGTCCCTTCTTAAAATCTGCGCACGTTGAAATCGAATATTCTGTAAGT
TGGCTTGCCCTTTTGAAAATCTTCAGTCTAGTACACTTTTATTTATCATT
GGGATTTGCAAAAATGAAAATCTTGAAAAACGAATTACCCCTGCTCAAAT
TACCATATGCTTAATCAAATTTTCTATCGTCACTTTTCAGCAACGAACGA
GCTGTACGGCCAATGTGGAATCGGTGGAGAAGACCATGCAGTCTGGGGAC
GAGCAGACGAATATTACACAAACTCTCCTGGTAAAGCTAACCCAAGACCA
TGCTACAAAGTCGATGCAAATAATCCAGGTTCTGATCTAGCCGGTGAAAC
ATCAGCTGCACTAGCCGCTACCTCTATTGCTTTTAAGAAATCAAACCCAG
GCTATGCTGCTACACTCATACAACACGCTAAAGAGTTATACACATTCGCT
AAAACCAACCAAGGAGTTTATTCCTCAAGTATTCCAGACGCTCAAACCTT
CTACAACTCCTTCAGTGGTTACAAGGATGAATTAGCATGGAGTGCTGCTT
GGCTTTACAAGGCTACAGAAGAGCAACAATATCTGGCTGACGCTGAAGGG
TTCTTCAATGAAATGCAACAAAACCCTGGCGAATTCTCCTGGGACAACAA
AGGTCGTGGTGTAGCAGCTCTCCTTTCACAGCTCACCGGTAAAGCAGCTT
ATAAACAAAACGTCGATAGCTTTTGTAACCAGATGCAGAATAACCAGCCA
CGTACTCGATACGGATTGGTCTTCATACAACAATGGGGCTCAAACCGTCA
CGCAGCAAACGTTGCCTTCATTTGTCTCGCTCATTCAAAAGCAACCGGTC
AATTCAACACATTTGGACGCGATCAAATCAATAAACTCCTCGGAGATGAA
CCAGCCAATCAACGCAGTTTTGTTGTCGGTTACGGTTTCAACCCACCAAA
TCAACCTCACCATAGATCTTCATCATGCCCGAACCGCCCAGCACCCTGTG
GGTGGAATGAATTCAATATTAACGCCCCAAATCCCCAAGTTCTAAATGGA
GCCTTAGTGGGTGGTGCTCGGTCAACAACTGATGTTTATCAAGATGATAG
GAGAGATTATATTGAGAATGAAATTACTCTTGATTATAATGCAGGCTTCC
AATCCGCCCTCGCCGCCCTACTTGAGCTTCAAAAAGATGGTGATTGTGGA
CAGGAATAAAACATTGAAATCAGAAAAATAATAGTTGACTACCAACCTAA
ATTATGAAATCCTGTTTTGTGAATATATCTTATTTATCTTCACTATCTAT
TTATTGTATCTTATTTTTGAAATTTTTTTTTTGGATAAAGAATATTGTTG
CTAGCAAAACTACTGCAGACTGTATCCAAATTTCTTGTAAACGGGATCCT
TTGAAAAGCTTAAAATCAGTCCAGCCATAGCAGCCTAAGACTAAAGATAG
TTTTAATTTTTGTGAAAAGATGACGAAAATTCTGTCTTTTGTCAGTTGCA
ACAACATATCGAAATTGCAAGAAGTGCCATCATGGGTATTATTTTTCAAA
CAGGAAGGTGGTGTTAATCAAAAATGAAATAGATTCCCGATGTTGTCACT
CTTTTTTTTTAAACACCAACTTTTTACGACTTTTTCACCGTGTTCCTTTC
GAGAAGAATGTGCTGAATCAGGAAGCAAAAACTGGAAAAATATTACAGAA
CCCACTACTCGTTTAATGTTGTTTCTTTATCCTTCTTTACAAAGGAAATT
GTCTATTTATCTACCATAGCCATTTTCAGAATGTCTAAACCCATCTTTCC
CGATCGGGAAACCTACCTCCTTCCGGAATCAGAAATCTTACTGTTTTGGG
AAGTTTTCCACCTTTCCATTCGACAAATATTTCCTGATGACGCAATACTT
GCCATTTCGATGTAGTGTTGCCAACTAATTGTTTATATACATAACTAGCA
AAATTTATTGTGGAAGGTTTGTTGGGTAAGGTTTATTTTTTTGCCTGATA
TTTTGACAGTCTGACCCAACTTAGGATAGCAGTACAGGGTGTGAAAAGAA
ATTCCTATTTGTAAGCAAGTGGTTCATTTTGGCTCACTGACAATTTTATT
AGACATACATTTATGTGCCAAATAAAGGTAAGGTAAATAAAAAGACAAAA
ATCAGGCTTTTTTAGGCTAAGACGAGTTTCAATGGTTTATTTCAATAACG
ATTTTTTCTGTTTCAGTCCCTGAACCAAGTCGTGAAGAACTTCACCGTCG
CTTTGTAGAAAAGCATGGTACGAAACATTCGATTAATGGATTACCGATCT
TGATCACTCTCCCTATTTTCGTGTTCGTCATCCTCTCCATTGCTTATGTC
TGGTGGAAAGAAACAGAAAAAAAGAAAGAAAAAGAACGACAGGAGAAAAT
GAATCAACAATCAATACCACTAGCCAATGTGGTGGTTGAACCTCCAAAAC
CTAAAATCGTAAGTGATGCCTTACTTATTCGTTCATCTATTGATGTGGTA
ACCACAGATCTGTAGAGCCCGAAGGGCTAGATAGGCAACTTTAAGCTTTC
TCCAGCAAAAAAAGTGAAGCAAAAATTCGACTTTTTAAATTTCGTGCCGA
TAAATAGGATCTAGCATTTTAATTGTTTTTGGAGCGCGAGATAAAAAAAG
TAGGCGGCAAACGCTATTTTGCATCTCTCAAATCAGTGAAATTACTTGTT
GTCACGTGATTTCTTTGGTAGAAAATCCTACCAAAACTTGCTTCACTTTT
CAATAAAGGCCGCGGATCTAGCCCTTCGGGCTTTANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CAGATTCGGAAGCCAGCGCCCAATCCCTTGAGCCATCGCCGCACAGCAAA
CTGACGCAATTCATAACATTTTATACCGAACTGGCAAAAGACGTGGGTAA
TGTTATTATAATATGGGTAAAAGTACCCCTTTTTTAAACTGACTGAAATT
CGAGCCGTTACTAGCAACCCTGCGGGGCCCAAGGCGCCGAGTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNACGGATAGGAAAAATTAAAAATGATACTTCCGACCGTCAAAAGA
TGATACTTCTGACCGTCGAAGATACTTCCGTCCGTTCACGGAAAAAAAAT
TTGCTGCGGAAAAAAAATTTGCTGCGTAACACAGTGGAGTCTCTTTAACT
CGAACCTGTATAACTTGAATGTCCCTTGCATATATCTGAACTCGAACGAG
TTCTATGGTCCCTTCAGTTGACAATGCCTCATAAACCTTACTCCATAACA
CGAAATTCCCTCAACTCGAACAAACTTTAGTTCCCCGTACGTGTTCGAGT
TATGGAGACTCCACTGTATTATACAAATTATCCTGGTTCGGTATATATTG
TACTCAGGCCTCAATGACTACTTTTAGTATCATTTTGTCCCACCCTGAAA
CAAACCTGTTTTTTTTTACATTTTTTTCTCAACAGTTTCGTTTAAGCGCC
GAAGGTATATACAGGTACCTAATCGTAATGTAATGTGTACGCCATGCTAC
CCTGAAGCTTAAAAGGGGATGGGAACAGGGCAGGGTCTATCCGGGCTAGA
ATAGTTAGAAATTAGGTGATAAATATTAAGTTATAGACCAAAATATTATC
TTGATATTTTAGACAATCGATCCCGCATTATTCGAAGGCTCTATGTGTTA
CCCCTCTTCATCCGAACGATCAAGTCTTAACAATCGCTCCCATAGTGCAT
GCTCAGAACGAACCAATGACAATCCATCTAGTCACTGTGGGGATGAACAG
ACACAGTTATTGGATGATCAAGATGACGTCATCACTTCTAGTGAGAATAA
TATACAGGCTTGATTTAGGGAACAGTTTGAGCAAACAATACAGTAGGTAC
TATGTAAAATTTTGGATTGTCGCCCGTAAAGCCTGAGGAACAAAAGACAA
GCTTTTAAAACACAGCAGAATTCTTCTAAGACGCTGTTTCACGAGAGCAA
GAACAAGAACTGATGGATAAATTAGCTGAGCTATGAAATACGAAAAATAA
ACATTATAGCTGATTATGAGAGGAAGTAGTGTATCTAGGTTTCAATATTT
TTCAGAATTTAATATTTTAATTGCACTGATAGATATTTATTATGCATAAA
CTTTTAAACAGGTTTTCAATGCACCATTAGCTTTTATTTAAAAGAAATTG
TATGTTTTTGTAGCATTTTGAAGATGAAAGGTCAGTCATGAAATGGAAAA
TCGTCCTGACCCAAATAAAAGATCGATTGTTGAGACCTGATCATTAATTT
TCGATTTTTTATTTTGAAAAATATAGTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004739XLOC_004739Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008487-exon-sc0000085-1575043694:624103..624675TCONS_00008487-exon-sc0000085-1575043694:624103..624675Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1575043694:623365..623796TCONS_00008487-exon-sc0000085-1575043694:623365..623796Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1575043694:622682..623005TCONS_00008487-exon-sc0000085-1575043694:622682..623005Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1575043694:622232..622402TCONS_00008487-exon-sc0000085-1575043694:622232..622402Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1575043694:621426..621863TCONS_00008487-exon-sc0000085-1575043694:621426..621863Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1575043694:619937..621005TCONS_00008487-exon-sc0000085-1575043694:619937..621005Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1575043694:617468..619735TCONS_00008487-exon-sc0000085-1575043694:617468..619735Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1575043694:614797..615463TCONS_00008487-exon-sc0000085-1575043694:614797..615463Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1510915933:624103..624675TCONS_00008487-exon-sc0000085-1510915933:624103..624675Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1510915933:623365..623796TCONS_00008487-exon-sc0000085-1510915933:623365..623796Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1510915933:622682..623005TCONS_00008487-exon-sc0000085-1510915933:622682..623005Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1510915933:622232..622402TCONS_00008487-exon-sc0000085-1510915933:622232..622402Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1510915933:621426..621863TCONS_00008487-exon-sc0000085-1510915933:621426..621863Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1510915933:619937..621005TCONS_00008487-exon-sc0000085-1510915933:619937..621005Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1510915933:617468..619735TCONS_00008487-exon-sc0000085-1510915933:617468..619735Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1510915933:614797..615463TCONS_00008487-exon-sc0000085-1510915933:614797..615463Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1491911889:624103..624675TCONS_00008487-exon-sc0000085-1491911889:624103..624675Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1491911889:623365..623796TCONS_00008487-exon-sc0000085-1491911889:623365..623796Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1491911889:622682..623005TCONS_00008487-exon-sc0000085-1491911889:622682..623005Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1491911889:622232..622402TCONS_00008487-exon-sc0000085-1491911889:622232..622402Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1491911889:621426..621863TCONS_00008487-exon-sc0000085-1491911889:621426..621863Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1491911889:619937..621005TCONS_00008487-exon-sc0000085-1491911889:619937..621005Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1491911889:617468..619735TCONS_00008487-exon-sc0000085-1491911889:617468..619735Clytia hemisphaericaexon
TCONS_00008487-exon-sc0000085-1491911889:614797..615463TCONS_00008487-exon-sc0000085-1491911889:614797..615463Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:614797..624675 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.3476	48.0177	20.96	14.3891	87.3545	48.4883	12.7267	10.4216	3.01216	21.372	4.33188	5.8595	0.461145	0.493845	0.152167	0.155372	18.1699	16.1034	0.908354	2.14452	10.9095	14.8168	20.4981	18.0886	10.6233	8.57444	1.25253	0.928146	6.27665	6.77708
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008487 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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