TCONS_00008485 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008485
Unique NameTCONS_00008485
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3132

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008485 ID=TCONS_00008485|Name=TCONS_00008485|organism=Clytia hemisphaerica|type=transcript|length=3132bp
TTTAGAATGAACtaaagctaaaacaaaatataacacacCAACAGGTGTCA
AAACCAAATCACCATGGAAACCTTACCAAGAGAGGTGACGTCAGTCTCCA
AATATGAAATTGAGCCTTTCAAACAAGGCCGACGTGTAGGATGTTATCTG
CTTGGAAAAACGCTTGGTGAAGGATCTTTTGCTAAAGTTAAAGAAGGACT
TCACATCATCACTGGTGAACGGGTTGCTGTTAAGATCATTGACAAGAAAC
GAGCACGCGAGGACCGATATATAAGTAAGAACCTTCGTCGTGAAGCACGA
ATACACCAACTGGTACGCCATCCCAATATCATTCAGTTGTATGAAGTTTT
AGAAACGGATCATTATTACTATCTCATCATGGAATATTCTGATGGTGGAG
AGCTCTTGGATTATATTTGTAGCAGAAAGAGGCTAGACGAGCATGTGGTA
CGGAGACTAGTTTCACAATTGGTTTCGGCCGTTGATGGTATGCACAAATC
TGGTGTTGTCCACAGaGATCTGAAGAtcgaaaatttccttttgagTCATA
ACGAAGATCTAAAGATTATAGATTTCGGTTTGAGTAACACTTTATCACAA
GACTGTATGCAAGAGTTTGAGAGGACCGGGGTATTTCCGCAACTTTTGAA
CACTCATTGTGGCAGTCCGGCATATGCTGCACCCGAACTTTTGGCACAAA
AGAAATACGGTCCACAAGTTGATATCTGGAGCATTGGCATCAATATGTAT
GCAATGTTGACGGGATTTTTACCCTACATGATGGAACCTTTCAACGTGAT
GGAAATGTATGAGAAAATGATGCAACGAAAAATGACGCCCGTTCCTTCCT
TCCTCTCACAAGCATGCCGTGATCTGTTAATGCGTTTACTGGAACCGGTG
GCCGAGTGGAGAATCACCCTGAAACAAGTCATGAAACACAAGTGGTTTAC
TGGGACCGAATACATTCCTCGTTCCATACCTCTTGGAGATATGATGTACC
AGAAGAAAGAACTTTGTGAGCCAGTCCTCGCCTACATGAAAATGACATTG
CGGATCAGAACTAAAGATACCATAAACGCTGTTGTATCAAACAGGGCTGT
CCACGCATCAGCAGTTTATCATTTGTTGGTAGCTAGGCTAGATCGATACC
TGAAGAACAAGAAAGAACGCTCGAAGGCTAAAGAGAACCATTTCGCTAAA
ttagaaattattaaaaaatcgaACTTATCTACAGAAAATGTAAACAGTCA
ACCAACCTCAAACACTCGGAATCATCATCCTAAACGCTTTACGTTCCGCG
GGAAGAAAATAGACTCTAAAACTAGGTCACATCCGAATCTCGGTGAGACA
GAAAACCTTGCAGATGATGAAGAAGATAATGTAGTGACTTTAATTGACCA
AACACAAAATACAGATACTTCGCGTCGAAAAGTAAGCATAGATAATACGA
CAAACGAAAAACATCAACAACATACTAAAAACAATAGTTCCAATCATTTA
AAAGTTATAGATCCTGCGATTCGTATGCGCGGACACAGACGGTCGAATAG
CTCCGCTGATGTCAACGAGTTACGGAAATCTCAAGAAATCGTGGAAAGCA
TACGGAATAGTTTGATATGTGATTCTAAAGGAGACTTAGAAAAAATGGCG
GCAAATATCAAAAAGAAAGCGGAAACGGCGTCACCCTCCCCTAGGGAATT
ATTTCCAAAGGGTGCGAAAGGGATTGTAACTAGAAAACAATCTTTTGATG
TCAGTGCAGATTTCCTTGGTTCGCCGAGTAATGGAGATAAAACGATAGAT
GTGACTCAATTCATTGAACAATCAACAGTGACACCTCCACGAAGAAATTC
TGGTGAAAAGTTGAAccaaaaacatcgaaaaatgTCTCTGGATGTCTTTG
ACGCACACGAGCCAAATGTGAAGGAGCAAAAAGAGCCTGTACCTGGCTGG
TTGATCACCAAGGTTGTCAAACAACCTCCACTCAAAGAAGAACACACTTC
CATAGATGGCAAACGTGAACAAAATGGTAGCCCGTCACCACGCAACCAAC
GTAAACATAAACGTGTAATTCACAGACCAGGTACACCTGAACAACAAAAG
CAAAATACAGACCAGACAAATAATGAGGAGTCAGAGGAACGATCTTCATC
CGTCTCCGACCGAATACGTCAATTTTCTAAcagaaaaaagaatgaagtgT
CGACACGCATCCAGACCCCTGAGATCGAAGAAATATTACGTAATGTACGA
AGCATCAATAAAACTCATCTCAGTGATGACTCAGAAGAAACCACGAACGA
TGAAAATCTCCCGACAACGCCCAAAGGGACGGGCAGCAAATGGCAGCCAC
CACAATTTCAAAAGACTAATAGCTATGACTCAAAACCAAGAGCGTTTATG
GATGATACAGATTCTTCTATTTCCAGCACGCCCTCGCCGCCCTTGATAAA
TAATGACGAATTTTCAAACGATAGCTGTGATGGCTGCGATGTCAACAATA
ACTCGGGAAAGCAAAATGTAGATAAAGCCTTAAACGCAGACATGACAAAC
CCCTCGACAAACAGTAACATTACACCTATAAAAACCATCAAAATCTCCAA
AAAGACATTAGAGTTGAACGTGAAACAGTTTACGCAGTATAACCGTGATC
AGAAGAATGAGAATCGATCGAACCTTACATCACATCATCATACTTCACTG
AAACCCTTACAATTGAAGTTCAATTTTACCGTACGAAAGAAAAAAgcgta
taaagaaaaacaacaaacacgATCCTTAACTGACATTACAAACGGCGTTA
ATAACAAAATGGAAGCGCGGCCGAGCGAAGAACAAATGTTAGCACCTAAA
CACAGGTGTAATGAGAGCTGTGATATCGTAAATGGTGAATGCAAGGAAAA
GAGAGATCAGACTATAGGTAAGCGAACGACTGGACATACGAAACGAACTG
TGATTAAACCACCGCGTATTCAACATTATTCATTTTTATCGATTCCTGAA
AGCACGTTATAACATCTCTTAAATGGATTGACCCTTTTCACTCAGACTCT
AACCACTAACACTGAACAGTGATTTAAAATCTTCAAAGCTAACCAACTTT
TGATTCTTAAAGAACATAACTTAACCCCTCGC
Run BLAST on NCBI

transcript from alignment at sc0000085:582498..589253-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008485 ID=TCONS_00008485|Name=TCONS_00008485|organism=Clytia hemisphaerica|type=transcript|length=6756bp|location=Sequence derived from alignment at sc0000085:582498..589253- (Clytia hemisphaerica)
TTTAGAATGAACTAAAGCTAAAACAAAATATAACACACCAACAGGTGTCA
AAACCAAATCACCATGGAAACCTTACCAAGAGAGGTGACGTCAGTCTCCA
AATATGAAATTGAGCCTTTCAAACAAGGCCGACGTGTAGGATGTTATCTG
CTTGGAAAAACGCTTGGTGAAGGATCTTTTGCTAAAGTTAAAGAAGGACT
TCACATCATCACTGGTNCTTACTTGGGAAAACGCTTGGTGAAGGATCTTT
TGCTAAAGTTAAAGAAGGACTTCACATCATCACTGGTGAACGGGTAAGTT
TCCAAGCGAAATGAAGCCATTCTATTGGTTAGAAATGACGTAAAAATTGA
ATTTAGCCAGTAGAATGGCTATGTTCATAGCTTGTGAACGTGGTCAGAGA
ATCTTTCTATAACTTGAACCTTTATAGCTTAAATGTCTTCTAAACTAGAA
CATAATTCTTGGAAAGTAACTAACAAACTCCTATGACTCAAGATCTCAAT
AACGCGTACATATTAAAAAAAATTTCTCAATTTTGATCTTCGAATATTAT
AGATAAACGGAGCGTAAGAATGTTCCCCAGTATTTTTGGCTCATTGTTCA
CGTCAGATAAAACACTCTCTGCCAGTCAGTGTCCTCAATACTTTAAGATA
GTATGCAGACTACAAAGCAACAATATTTTAATGATCTGATTCTCTATACA
TTAAGGTTGCTGTTAAGATCATTGACAAGAAACGAGCACGCGAGGACCGA
TATATAAGTAAGAACCTTCGTCGTGAAGCACGAATACACCAACTGGTACG
CCATCCCAATATCATTCAGTTGTATGAAGTTTTAGAAACGGATCATTATT
ACTATCTCATCATGGAATATTCTGATGGTGGAGAGCTCTTGGATTATATT
TGTAGCAGAAAGAGGCTAGACGAGCATGTGGTACGGAGACTAGTTTCACA
ATTGGTTTCGGCCGTTGATGGTATGCACAAATCTGGTGTTGTCCACAGGT
AATTGGGTTTAAATAGTTAAAGGGATTATCAGATGGTTTGGTCAGTAGAA
ACCTTATGTGGCTTGAGTAAAACCTGAGTAAATCATTTCGAGATATCACA
ATTTGGAATTTTTAAAAATGGGTTCTCACACGGGTCTTACTTGGAAATTC
TATTGTTTTGACTTGGAAAATGGTTAAGAACTAAAATATTTTGAGCTTTT
GCCCAGGACAATCCACATGTCAAAAAATCTCAAACCATCTGATTATCCTT
TTAAGATTTGTTACAAAATATTTATATGGCGTATGGACAGGAAAAAATCA
AAAAATCTTAATCTGATAAATAAACAATTGTGGAGACCACGTTCACGAAA
AAAAAGGATTTTAGAAATGTCAGATTAGAGACGGTCAAAATCTGATGATA
ATGTCAATAAGAACAAGATCCTATAGCAGGATATTTTCACTGGGATTTCA
AAATAATCTGGTATATCTTTCAGAGAGGGAAACGCCTACACCTCTTAAGA
AAACAGTAACATTTTGACATTTATCAAAACTTCCTTTCACATAAGTACTG
TAAATATTTCCTGCAAGTCTTTGAATTTATTTATTGATAACATCCTTGTA
CTAAACATTTTTTGTGTTTTTTGTTTTAGAGATCTGAAGATCGAAAATTT
CCTTTTGAGTCATAACGAAGATCTAAAGATTATAGGTTCGTTCCTTTCTG
ACATTCCAGTTTAACCTTGCTATTGACACCATGTTACATTCCTTCCCATT
CCCTTTCATAAGCTAATCTTGTTGATCCGAGTAAAAAAATCTTCCCAAAT
TGTTTGCAGAATTCTCCAAATCTATTTCAAAAGCTTGATCTAGATAGATA
TGAGCCATCCGAGTGCATTCGGGATGAGTCCTACTCCCAAAGGAGTATGA
ATCACGGCTCACGGCGCTTGACCTCAAAGCAAAAAAAAGATTACTCCTGG
TTTGGATAAATCAATCCATGTTACTGTAGATGCTGAATGAACAAGCTAAA
TCATCAATGGCTTCAAAACATTAAAAAAAATTATTTCCATTTTATTTAGA
TTTCGGTTTGAGTAACACTTTATCACAAGACTGTATGCAAGAGTTTGAGA
GGACCGGGGTATTTCCGCAACTTTTGAACACTCATTGTGGCAGTCCGGCA
TATGCTGCACCCGAACTTTTGGCACAAAAGAAATACGGTCCACAAGTTGA
TATCTGGAGCATGTGAGCATTACATTAACATTTTTCATGGTACAAAACAA
AAACTGTAATCTACTGTATGCCTAACCTTTTGGGGCATCGAGTACTAAAA
ACTTTTATCTACTTTTATTCATTTGAACCGTAAGTATATGTTATCTTCCA
TAGATTTCTACTAACAAGTCTCAAAGTTTAGAGTTTCTAGAGATTGGAAA
GTATTATGTAGATTGAAGTCTCGAACACGCACGAGGAACACAATAAATTT
GTTCGAATTTAGGAAATTCCGAGCCATGGAGTAAGATTTATAAAGGCATT
GTTAACTGAAGGGACCATAAAATGTGTTCGAGTTATAGAGGTTCGAGTTA
AAGAGACTCCACAGTAGTAACTAAATTTCAAATTCCGAGTCTATGAACAA
ATTTCATTGTTTTTCATATTAGTGGCATCAATATGTATGCAATGTTGACG
GGATTTTTACCCTACATGATGGAACCTTTCAACGTGATGGAAATGTATGA
GAAAATGATGCAACGAAAAATGACGCCCGTTCCTTCCTTCCTCTCACAAG
GTAAGCCAACAAATTCTACGAGGCTAGCACAACCTTTACCATATCAGTAA
CAAAATTTGCATAGGAAAAATTCAAAAAAGCGCCTCGACTTTTTCGGTAA
AAAACTGCGAAATTTCCTATCATCCTCGATACACCCAAATAATTACGGTG
AGTTTTTTTTTAATTTTCAATGAAATTATTACTTACACTCTTCTTTTGAA
AATCATCCATTTTAGCATGCCGTGATCTGTTAATGCGTTTACTGGAACCG
GTGGCCGAGTGGAGAATCACCCTGAAACAAGTCATGAAACACAAGTGGTT
TACTGGGACCGAATACATTCCTCGTTCCATACCTCTTGGAGATATGATGT
ACCAGAAGAAAGAACTTTGTGAGCCAGTCCTCGCCTACATGAAAATGACA
TTGCGGATCAGAACTAAAGATACCATAAACGCTGTTGTATCAAACAGGTA
TTTCCTTCTTCGAAGATAGCCGTTAGCTGAATAAAACCTCTAGTAGATCC
ACTTTCCTAACTACAGTCCTCAATCTCTAAAAGGTTTATGTTTTTTCCAC
TTTTGATTTGTCATCTCTAAGTGATAAATATTGAATAATTTACATAAATA
AAGAGGACTCACTAAGTCCACCTAGTCAAAAAAAAAATCAGATAGCTTTG
AATTCCTTATAAACCTTTGTATCTCTCTCTTCCTTTTAGGGCTGTCCACG
CATCAGCAGTTTATCATTTGTTGGTAGCTAGGCTAGATCGATACCTGAAG
AACAAGAAAGAACGCTCGAAGGCTAAAGAGAACCATTTCGCTAAATTAGA
AATTATTAAAAAATCGAACTTATCTACAGAAAATGTAAACAGTCAACCAA
CCTCAAACACTCGGAATCATCATCCTAAACGCTTTACGTTCCGCGGGAAG
AAAATAGACTCTAAAACTAGGTCACATCCGAATCTCGGTGAGACAGAAAA
CCTTGCAGATGATGAAGAAGATAATGTAGTGACTTTAATTGACCAAACAC
AAAATACAGATACTTCGCGTCGAAAAGTAAGCATAGATAATACGACAAAC
GAAAAACATCAACAACATACTAAAAACAATAGTTCCAATCATTTAAAAGT
TATAGATCCTGCGATTCGTATGCGCGGACACAGACGGTCGAATAGCTCCG
CTGATGTCAACGAGTTACGGAAATCTCAAGAAATCGTGGAAAGCATACGG
AATAGTTTGATATGTGATTCTAAAGGAGACTTAGAAAAAATGGCGGCAAA
TATCAAAAAGAAAGCGGAAACGGCGTCACCCTCCCCTAGGGAATTATTTC
CAAAGGGTGCGAAAGGGATTGTAACTAGAAAACAATCTTTTGATGTCAGT
GCAGATTTCCTTGGTTCGCCGAGTAATGGAGATAAAACGATAGATGTGAC
TCAATTCATTGAACAATCAACAGTGACACCTCCACGAAGAAATTCTGGTG
AAAAGTTGAACCAAAAACATCGAAAAATGTCTCTGGATGTCTTTGACGCA
CACGAGGTAAGTGCTTGTAAATACAATTTTATCATTTTGTTAAAGGTTTT
TCAAGAATTAGTTAGGACACTTTAAGGTGTTTCAAAGAGAATTTGTTGAC
TTCAATTACCTTTAAACTACGGTTTCAAGACCGCTTGATATTTTTCTACA
TAAAGTCGCAATAAAACGCAATGCATTGGTCTTGGCCATTGGCTTTCTTA
AGGATTTTCATGGAATCTATCTCAGAACTCTACTTTTGGTAGAATAAAAA
CGGTAAAAATCAAATGTATAGATTTTGATACCGAATCACGTATGTTACAA
AATACGAATCATGTCTCTTTACTTAGATACTTAAAACTGTGGATGGTTTT
AATGAGCGGTCGTTAATTAAACAAAGGAAAACAAGGGATTAAGATTAAAC
TCGTAATGAGTTTCAAACAGTAGGAAAAAAAATTACACTGAATGAATATT
ACATTATGAAAAGTCTCTACAATTAAAAACAGTAAACTTAATCACGAACT
AAAATCCCGATGGCGAGACCGTCTCAGCTTGAGTCAATCTCAAAGATCTT
ATGAACATCCATAAAACGTCCAAAGCCAAACATGACGTCATTCATAAGGG
TGATGTTTGACGTCTAGAGAGTTTTTGTGTGCGGCGAAGGGATTTGAGAT
CTCATTTTTCCTGCTGGTTGATAGTTGTCCTACTGAGGAAACCAATCAAG
AGATGTAATTGAATCTCTTTCTCAATCAATGAAAGTTTTAATGGAATTTA
CTAGTCACTTATCTGGAGGCCACTATATAAACCACAAACACGTCCCCTCA
TAAAGTTCAGTAACTTGTTTAAACACTAGTGGTGATACTACGTTGAGAAT
AAAAAACAACTTTGGTCTTTATAAATTATGGTGTGGATTGATACACCAAG
GAGGCAGTTCTGGGTTAGTAACTTTATGCAGTTGTCACAGTCAAAAACAT
GTTTATATATTACGCTTCTTTTCCAGTCAGAAAAGAAATCGTTCTGAAGC
CATCATATTGGCTTTTCACACACACACACAGAACAAATTATTCTAGTCAA
CGAAATGGCTTTATCGAACTTTTGAAATGGAAACAGAGCCGTAATGAAAC
CTCAAAGAGCTCTAAAAGTTTCCACTTTGGCAAACCTGTATAACAGGCAA
AGCTAAAGGTTCATTCTAAGTTCATCTATACAGTTGATTATAGTTGATAA
AATTTGTGCTAAAAGAATTTAGGACAATATTAACGTTACTTTCCAAAGAT
TTGTTACTTAATCTAAATATTCTTTCATTTTGTAGCCAAATGTGAAGGAG
CAAAAAGAGCCTGTACCTGGCTGGTTGATCACCAAGGTTGTCAAACAACC
TCCACTCAAAGAAGAACACACTTCCATAGATGGCAAACGTGAACAAAATG
GTAGCCCGTCACCACGCAACCAACGTAAACATAAACGTGTAATTCACAGA
CCAGGTACACCTGAACAACAAAAGCAAAATACAGACCAGACAAATAATGA
GGAGTCAGAGGAACGATCTTCATCCGTCTCCGACCGAATACGTCAATTTT
CTAACAGAAAAAAGAATGAAGTGTCGACACGCATCCAGACCCCTGAGATC
GAAGAAATATTACGTAATGTACGAAGCATCAATAAAACTCATCTCAGTGA
TGACTCAGAAGAAACCACGAACGATGAAAATCTCCCGACAACGCCCAAAG
GGACGGGCAGCAAATGGCAGCCACCACAATTTCAAAAGACTAATAGCTAT
GACTCAAAACCAAGAGCGTTTATGGATGATACAGATTCTTCTATTTCCAG
CACGCCCTCGCCGCCCTTGATAAATAATGACGAATTTTCAAACGATAGCT
GTGATGGCTGCGATGTCAACAATAACTCGGGAAAGCAAAATGTAGATAAA
GCCTTAAACGCAGACATGACAAACCCCTCGACAAACAGTAACATTACACC
TATAAAAACCATCAAAATCTCCAAAAAGACATTAGAGTTGAACGTGAAAC
AGTTTACGCAGTATAACCGTGATCAGAAGAATGAGAATCGATCGAACCTT
ACATCACATCATCATACTTCACTGAAACCCTTACAATTGAAGTTCAATTT
TACCGTACGAAAGAAAAAAGCGTATAAAGAAAAACAACAAACACGATCCT
TAACTGACATTACAAACGGCGTTAATAACAAAATGGAAGCGCGGCCGAGC
GAAGAACAAATGTTAGCACCTAAACACAGGTGTAATGAGAGCTGTGATAT
CGTAAATGGTGAATGCAAGGAAAAGAGAGATCAGACTATAGGTAAGCGAA
CGACTGGACATACGAAACGAACTGTGATTAAACCACCGCGTATTCAACAT
TATTCATTTTTATCGATTCCTGAAAGCACGTTATAACATCTCTTAAATGG
ATTGACCCTTTTCACTCAGACTCTAACCACTAACACTGAACAGTGATTTA
AAATCTTCAAAGCTAACCAACTTTTGATTCTTAAAGAACATAACTTAACC
CCTCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004738XLOC_004738Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008485-exon-sc0000085-1575043694:589050..589253TCONS_00008485-exon-sc0000085-1575043694:589050..589253Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1575043694:588961..588978TCONS_00008485-exon-sc0000085-1575043694:588961..588978Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1575043694:588256..588548TCONS_00008485-exon-sc0000085-1575043694:588256..588548Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1575043694:587569..587624TCONS_00008485-exon-sc0000085-1575043694:587569..587624Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1575043694:587042..587204TCONS_00008485-exon-sc0000085-1575043694:587042..587204Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1575043694:586504..586631TCONS_00008485-exon-sc0000085-1575043694:586504..586631Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1575043694:586057..586288TCONS_00008485-exon-sc0000085-1575043694:586057..586288Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1575043694:584998..585814TCONS_00008485-exon-sc0000085-1575043694:584998..585814Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1575043694:582498..583718TCONS_00008485-exon-sc0000085-1575043694:582498..583718Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:589050..589253TCONS_00008485-exon-sc0000085-1510915933:589050..589253Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:588961..588978TCONS_00008485-exon-sc0000085-1510915933:588961..588978Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:588256..588548TCONS_00008485-exon-sc0000085-1510915933:588256..588548Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:587569..587624TCONS_00008485-exon-sc0000085-1510915933:587569..587624Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:587042..587204TCONS_00008485-exon-sc0000085-1510915933:587042..587204Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:586504..586631TCONS_00008485-exon-sc0000085-1510915933:586504..586631Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:586057..586288TCONS_00008485-exon-sc0000085-1510915933:586057..586288Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:584998..585814TCONS_00008485-exon-sc0000085-1510915933:584998..585814Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1510915933:582498..583718TCONS_00008485-exon-sc0000085-1510915933:582498..583718Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:589050..589253TCONS_00008485-exon-sc0000085-1491911889:589050..589253Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:588961..588978TCONS_00008485-exon-sc0000085-1491911889:588961..588978Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:588256..588548TCONS_00008485-exon-sc0000085-1491911889:588256..588548Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:587569..587624TCONS_00008485-exon-sc0000085-1491911889:587569..587624Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:587042..587204TCONS_00008485-exon-sc0000085-1491911889:587042..587204Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:586504..586631TCONS_00008485-exon-sc0000085-1491911889:586504..586631Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:586057..586288TCONS_00008485-exon-sc0000085-1491911889:586057..586288Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:584998..585814TCONS_00008485-exon-sc0000085-1491911889:584998..585814Clytia hemisphaericaexon
TCONS_00008485-exon-sc0000085-1491911889:582498..583718TCONS_00008485-exon-sc0000085-1491911889:582498..583718Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:582498..589253 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.194199	0.177539	0.214725	0.216371	3.56209	2.84442	4.7259	5.34383	0.900288	0.819943	0.26726	0.520794	14.4048	12.0794	1.70879	1.72912	11.0742	14.7641	13.8055	13.3194	7.94906	8.26886	2.85472	4.56017	9.52856	8.57897	11.7229	11.3913	1.53633	2.8791
Blast
[Close]
BLAST of TCONS_00008485 vs. Swiss-Prot (Human)
Match: HUNK (Hormonally up-regulated neu tumor-associated kinase OS=Homo sapiens GN=HUNK PE=2 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 2.908e-109
Identity = 177/368 (48.10%), Postives = 253/368 (68.75%), Query Frame = 1 
Query:   73 LPREVTSVSKYEIEPFKQGRRVGCYLLG-KTLGEGSFAKVKEGLHIITGERVAVKIIDKKRAREDRYISKNLRREARIHQLVRHPNIIQLYEVLETDHYYYLIMEYSDGGELLDYICSRKRLDEHVVRRLVSQLVSAVDGMHKSGVVHRDLKIENFLLSHNEDLKIIDFGLSNTLSQDCMQEFERTGVFPQLLNTHCGSPAYAAPELLAQKKYGPQVDIWSIGINMYAMLTGFLPYMMEPFNVMEMYEKMMQRKMTPVPSFLSQACRDLLMRLLEPVAEWRITLKQVMKHKWFTG--TEYIPRSIPLGDMMYQKKELCEPVLAYMKMTLRIRTKDTINAVVSNRAVHASAVYHLLVARLDRYLKNKKE 1167
            LP  V+ V +  +  F+  +RVG YL+G + LGEGSFAKV+EGLH++TGE+VA+K+IDKKRA++D Y++KNLRRE +I Q++RHPNI QL ++LET++ YYL+ME   GG L+  I  +KRL+E   RR + QL+SAV+ +H++GVVHRDLKIEN LL  + ++K+IDFGLSN     C      +  F    +T CGSPAYAAPELLA+KKYGP++D+WSIG+NMYAMLTG LP+ +EPF++  +Y+KM+ ++M P+P+ LS      L  LLEP    R  ++Q + ++W     T  +P ++   + +   ++L   V+ +M   L  +  D IN V+SNRA H  A+Y LL  +L+RYL  K +
Sbjct:   37 LPAWVSGVPRERLRDFQHHKRVGNYLIGSRKLGEGSFAKVREGLHVLTGEKVAIKVIDKKRAKKDTYVTKNLRREGQIQQMIRHPNITQLLDILETENSYYLVMELCPGGNLMHKIYEKKRLEESEARRYIRQLISAVEHLHRAGVVHRDLKIENLLLDEDNNIKLIDFGLSN-----CAGILGYSDPF----STQCGSPAYAAPELLARKKYGPKIDVWSIGVNMYAMLTGTLPFTVEPFSLRALYQKMVDKEMNPLPTQLSTGAISFLRSLLEPDPVKRPNIQQALANRWLNENYTGKVPCNVTYPNRI-SLEDLSPSVVLHMTEKLGYKNSDVINTVLSNRACHILAIYFLLNKKLERYLSGKSD 394
The following BLAST results are available for this feature:
BLAST of TCONS_00008485 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HUNK2.908e-10948.10Hormonally up-regulated neu tumor-associated kinas... [more]
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