TCONS_00008445 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008445
Unique NameTCONS_00008445
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1020

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008445 ID=TCONS_00008445|Name=TCONS_00008445|organism=Clytia hemisphaerica|type=transcript|length=1020bp
CTTATATACTCTTGAATTTACTTGTACTGTAACTTTTTAGgtcaaaaaat
attttaaaatgtcatttgACTTGAATGGAAAAGTTGCTTTGATCACAGGA
GCAAGCTCAGGTATTGGAAAAGGCACAGCTCTCTATTTTGCGAAGAATGG
AGCCAGATTGGCCATCACTGGAAGAAAGGAAGACAATTTAAAAGAAGTTG
CAAAAGAATGTGAAGAAGTTAATCCAAATAAAGAGAAGGTGCTGACATTA
GTTGGTGATTTAAGCAAAGAAGAAGATACTGAACGAACTTTCAAAGAAAC
TATCAACCACTTCAATCAATTAGATATTTTGGTGAATTCTGCAGGAATAG
TGATGAATGGTACAGCAGAGTCAACATCTCTTCAAGATTACGATTTACAA
ATGAACATCAACGTCCGATCTATCTTTCACCTGACGAAATTGGTAATTCC
TCATTTAATAAAAGTTAAAGGAAATATTGTTAATGTATCAAGTATAACAG
GATTGCGCTCGTTCCCTGGCGTCTCAACATATTGCATGTCAAAAGCAGCC
ATTGATCAATACACAAGAACAACAGCTTTAGAGCTCGCACCACACCAAGT
CAGATGTAATGCTGTCAACCCTGGAGTCATTGTAACAGAACTCCATAAGA
GAGGTGGCATGTCTGATGAAGCTTATGAAAAGtttttagtGAAATGTCAA
TCAACACACGCATTGGGACGTGCTGGTAATGTTGATGAAGTAGCATCGGT
CATTGCTTTCCTGGCTTCAGATAGTGCTTCCTTTGTCACTGGTGCTACCA
TTCCTGTGGATGGTGGAAGACATGCTATGTGCCCTAGATGagatttgagg
ctgaaattgtaTGGGGGTTTTGATAGAAATTGGTGTTTTTTGGGGAAGAT
CAACTTTTGCAAACTGaaagtttttgtattttcatttccAGTAAAGATTT
TgtagaatttatttttataagagtgGATTTATGAATTTATTAGAAAACAA
AGTAAGTAAGTACAATTTGC
Run BLAST on NCBI

transcript from alignment at sc0000085:93495..110608-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008445 ID=TCONS_00008445|Name=TCONS_00008445|organism=Clytia hemisphaerica|type=transcript|length=17114bp|location=Sequence derived from alignment at sc0000085:93495..110608- (Clytia hemisphaerica)
CTTATATACTCTTGAATTTACTTGTACTGTAACTTTTTAGGTAAGATCCA
TTTCAAATAAATTTCTATTTCTTAACATGAAATTTCCATTATTTTCATTA
TTTCCAACTTAACTGGAAAAAGTTGAAGGTAGCAGATCTCAAACCTCAAA
TCTACGCCAGAGATATCCGGTGCACGAGCTGCACTTTCCAGACTGGGCTC
CATCGTGCTGATGACTGCCAATTTTATTTTCTTCTCTTTGATGTGGGAAA
GTTGAAAATTTTACCAAGATTTAGCTCATGAAAGTGGTCATTCACATTTA
TAAATATTTGCAAATTTCTGCAGTAAGATTTTGCAAAGGAATCTTACAGT
AGTGTGGAAATAGGAATATTATAATATTTAGTTTTAGAAAACAAACCCTT
TCCATCCAATCTCATACCATGCCGGTCATCCCAGGAAAAATAAACAGAAA
TAAACAGAAATAAACAGAACCCTTTTACTCCTCTAGATGTAGAATCCATC
TATAAACTTGAATGTTGTAATAACCTTTAGGATAAAACATAAAACAGCTC
CTAAAATCTTAAACGACCTTTTCATTGACCCTAAACCAGACGTAATTAAT
CGAACCAATCGAACGGTATTTTTAATCGAACTTTGTCGAACTTAATCGAA
TTTTGTTGGCCGATTAATGTTCGACTAAGTTTGGTTGTCAAACTTTAATC
GAATACTCACAAATTTCTCAAAATACAAAGTTCGATAAAGCTCGATTACT
GAAATCGAACTCAATCGAGCTCTTTTTTAAAGAGACCTCGACAGTTTGAT
TACATTAATCAAACTTAATCGAACTAATCGAACTTAATCTAGCTTTGTTA
AGTTTAATTGAACAAAAATTTTAGAAAACCGGAGCAACTGAAGGCCGCTC
CACTTGCGCGTAATTCGATCGCACTTTTTGCCGGCCTTTGACGACACTTT
GAGGAACTTTGAAGCACCCCCGCTGGTGCAGGCGTGTACCCTTACACCCC
CCCTGACCAGTGGGCACCGATCGAACTCCCCGGAACCCCGGCCGGGATCT
CCAGGGGCCGTCCACGTTGGTACCCAAAGGAGGTCATTTTTTCCAATTTT
GACCAATTTTCAAGCCTTTCCGCCTTAATTCCAAGCCTTTTAAAGGCTTC
GGATGGCTGATGGAGGGTGCTGGCTGAGAGAAAGCAAGGCAGAGGGTATC
CAAAGCCGTCCGAAGGGCTGTGGTAGGCTGTGGGGTTTGACAACATTTTG
AGGAGCTTTGAAGGACCCCCAACGGTGCAGACGTGTACCCTCACATCCCC
TGACCAGTGGGCACCAATCGGACCCCCCCGGTAGTACCCAAAGGAGGTCA
TTTTTTGTTGTCGAACTTTTTTGAACGGAGTTTTTTGTCGAATTTGTCGA
ACCTTTCTTGTTGTCGAACTTTATCGAGCGGAGTTTTATGTCGAATTTGT
CTAACATTTCTCGTTGTCGAACTTTGTCGAACTTAATATGTTTTGTCGAA
CTTATTCGAATACTCACAATTTTAGCCACTTTTTAAAAGTTTGATTAAGG
AATTTAATCGAACTTTTGTCGTTCAATTAAGTTCGACAAAGTGCAATTAG
TTCAGTAATCGAACAGTTCCATTAATTACGTCTGGCCTAAACATCAAACA
GGTACTAGAATCCAAAAAAATGCATTGTCCACCTTACACTATGATCAAGC
AAAGTCTCCTATTCGTTTCTACGGTCCTCAATGCTGGAACCAAAACTGCT
TACCTTTTAGCACTTTGACAAGCCAGTCCACTTTCTCTTCCAAACTTAAA
TTAAAACTCTTCAGTTAAATCTGCTATTTCCACCACTTCCAGTTCCATCA
TCCAAAAATACATTCCTTGCTGCTGCCAAAGCAACTTATAAAAGAATTAT
GTATATATTTAGGTATTCTTTCCTCCATTTCTGCTCATTTCTATTTTTCT
CTTCTTATAGTTTTTATTTCTTAGATTTTTAACATAATATATATCATTAT
AGTTTTTATTTCCAACCGACCTTGTAAACCCTTAGGGTTATTTCGTGTTA
GGAATTTTTGAATGTACAAAGCTCGTAAAATGAAAATAAACTTGAAACTT
GAACTTGACAGTATATATATTTTTTGGTTTAGGCAGTATTTTTTCAATAA
AACATCTCGCTCAAAAGTTCATTCAATACTCACCTACCCTTTAAGATATG
GTAGGATAGTTGATTTTTGGCATTTTTCATAATAATGTAGCCTTATTTTT
CTCCTCTTAGCCGTAACCAGGCTGTAACAAAGCTATTTTACAAGGAACAA
GCCAGTCTGGAAAGGAGGGATATGTTATGCCAGAGCTGCGCCAACTTAAC
TGAGTCAAGCCACGTTACCTTGGTACAGACCGCTGCTTGCACGTCGGTAC
AACAGCTTCGACTCTAACTGCAAAAACTCGTCTTATTTGACGCTGTGTTT
CACACGTCATTATTATACAGAATACGGTTTCAGGCCCGTTCAGGTCCTCT
CTAAACCGATCTTGTTTTACAAAATATTTTTTTTAAATATAGTCCTCCTT
GAGGACTTCCTCGCACTCTCCATTTGTAATCGCTCTGCGGCATTGCTTGA
TTTCTCTCGTTTGCTTTCTCCATTCTTTTACTTGGTCTCTTTCCATTATT
GTTAAATCGTCTGTGATGCTCATGTTGGCGTACTTATCGTACTACTTCAA
TTCTCGTAAGTTTCTCATAAATTTGTATTTTACATGCCCGTCATTAAATA
CAACTTTGATTGGTCGTGTACGATTTGATTCTTTACCAATACGGGAGACG
TAAGTTGGCTCTGTGTTTATTTTAACGTCGTTTAAGAGTTCGTTTACGAA
ATCATTGTCATCTCTATTANNNNNNNNNNNNNNNNNNNNNNNNNNNTTCC
CTTGATTGCTTTCTCTGTTCTTCCATTTGTTCTTCGACCTTTTCGCTGCG
AAGTATTTGTTTCATGCTAGATACATTTAACTCGTCACCGGTTTTCGTGA
TTTCGGCAAAACTTTTCTTTAAATGTGTTTTCGTTTTGTTATCTAAAGGT
TTCGCATTCATTGTCTCTTCGATTTTAGTTGTCAGTTTAGTTTCCAGCGC
GAAAAATTGAGCTTGAATTGTATCGGCAACATGGTTCCTATCTTTAACGT
ATCCCTGACATCTAGCTTGTAATTCTTTAACTGCAACATTCAACTTCCTT
TCATTCTCGTTCTTCACCTTGATAATATTTTCGCACGCTTCAATTTCTTT
ACCGCTATGTGTGCAGCTTTTGGTTTTCACTGACTGGTCCAAGATTTTTC
GGTGTAGCTCTTGATCAATGGAACAGCAATTTATGCATNTTCGTTGATAA
GGCTCTGTTCACACTTTCAACTTCGAGCTGTCAAGTCAACAACTGGAAAC
AATCTGGTGTTTTCAGTTTTTTAGTTACCTTGGTGCAGACTGCTGCTTGC
ACGTTGGTACAACTGCTTTGACTCTAGCTGTCAAGTCAACACGTCAACCA
GAGTGCTTGTTGGTTAGGCTTTATTCACACTTTCAACTTTGAGCTGTCAA
GTCAACAACTGGAAACAATCTGGTGTTTTCAGTTTGAGTCAAGTTTACGT
TACCTTGGTACAGACCGCTGCTTGCACGTCGGTACAACCGCTTCGACTCT
AGCTGTCAAGTCAACACATCAACAGAGAGCTTGTTGGTTAGGCTCTATTT
ACACTTTCAACTTCAAGCTGTCAAGTCAACAACTGGAACCAATCTGGTGT
TTTCAATTTGAGTCAATCTTACGTTACCTTGGTGCAGACCGCTGCTTACA
CGTCGGTACAACTGCTTTGACTCGAGCTGTCAAGTCAACACGTCAACCAG
AGCGCTTGTTGGTTAGACTCTATTCACACTTTCAACTTTAAGCTGTCAAT
TCATTGTCGCTGACAAAATCAACTGCTCACATTTAACCACCAAACGATGT
CTGTCACTAGTGAAGCTGGAGACCAGATTTCTGTGGATCTGAAGATAGCC
AGTCTTCGCAGAAAACGAGGAGGAAAGAAAGGCTCAATAACCGAGCTGTC
AAGTCAACAACTGGAAACAATCTGGTGTTTTCAGTTTTTTAGTTACCTTG
GTGCAGACTGCTGCTTGCACGTTGGCNTGCATAATGCAGTGTTCGTTGAC
ATTTATGACATTCTAATCTCATTTTGTCGTCATCTTTTATGCAGTTTTGT
TCTGTACATCGATTTGCAACATTTCCGATGTCATCTCTTGTTGAAATTCT
GCTAGGCGATACCGCTTTTTGTTGAAATTTGGTCGTTTTTTTCATATTTT
TGTATTTTATTAAACATTCTCCATTTTAAAAAAAAAAAACGAAAAGCGCG
ACTGATCTGGTCCGTCATGTCGTGAACTCAACTGCTTCGATGCTGTCTAT
CAAACGTCACGTTGTCAACCTCAACTGAGCTTTGTTGGTAAGGCTCTTTT
CACACTTTTTACTTTGTTTTGTGAAGTGTTCAACTCAACTGCTTCGAGGC
TGTCTGTCAAACGTCACCTCGTCAACTCAACTGCTTAGACGCTGTCTATC
AATTGTCACGTTGTCAACCTCAACTGAGCTTCGTTGGTAAGGCTCTTTTC
ACACTTTTACTTTGTTTTGTGAAGTGTTCAACTCAACTGCTTTGACGCTG
TCCATCAAACGTCACGTCGTCAACTCAACTGCTTTGACGCTGTCTGTCAA
ACGTCACGTCGTCAACTCAACTGCTTCGACGCTGTCTATCAAAAATCACG
TCGTCAACTCAACTGCTTCGACGCTGTCTATCAACGCCACGTCGTCAACC
TCAACTGAGCTTCATTGGTAAGGCTCTGTTCACACTTTAACTTTGTTTTG
TGGAGTGCTCAACTCAACTGCTTCGACGCTGTCTATCCATCATCAACCTC
AACTGAGATTCGTTGATAAGGCTCTGTTCACACTTTCAACTTCGAGCTGT
CAAGTCAACAACTGGAAACAATCTGGTGTTTTCAGTTTTTTAGTTACCTT
GGTGCAGACTGCTGCTTGCACGTTGGTACAACTGCTTTGACTCTAGCTGT
CAAGTCAACACGTCAACCAGAGTGCTTGTTGGTTAGGCTTTATTCACACT
TTCAACTTCGAGCTGTCAAGTCAACCCATCAACAGAGAGCTTGTTGGTTA
GGCTTTATTCACACTTTCAACTTCGAGCTGTCAAGTCCACACGTCAACCA
GAGCGCTTGTTGGTCACCCTCTATTCACACTTTAACTTTGTTTTGTGGAG
TGCTCAACTCAACTGCTTCGACGCTGTCTATCCATCATCAACCTCAACTG
AGATTCGTTGATAAGGCTCTGTTCCCACTTTCAACTTCGAGCTGTCAAGT
CCACACGTCAACCAGAGCGCTTGTTGGTCACCCTCTATTCACACTTTAAC
TTTGTTTTGTGGAGTGCTCAACTCAACTGCTTCGACGCTGTCTATCCATC
ATCAACCTCAACTGAGATTCGTTGATAAGGCTCTGTTCCCACTTTCAACT
TCGAGCTGTCAAGTCCACACGTCAACCAGAGCGCTTGTTGGTCACCCTCT
ATTCACACTTTAACTTTGTTTTGTGGAGTGCTCAACTCAACTGCTTCGAC
GCTGTCTATCCATCATCAACCTCAACTGAGATTCGTTGATAAGGCTCTGT
TCCCACTTTCAACTTCGAGCTGTCAAGTCCACACGTCAACCAGAGCGCTT
GTTGGTCACCCTCTATTCACACTTTAACTTTGTTTTGTGGAGTGCTCAAC
TCAACTGCTTCGACGCTGTCTATCCATCATCAACCTCAACTGAGATTCGT
TGATAAGGCTCTGTTCCCACTTTCAACTTCGAGCTGTCAAGTCCACACGT
CAACCAGAGCGCTTGTTGGTCACCCTCTATTCACACTTTAACTTTGTTTT
GTGGAGTGCTCAACTCAACTGCTTCGACGCTGTCTATCCATCATCAACCT
CAACTGAGATTCGTTGATAAGGCTCTGTTCCCACTTTCAACTTCGAGCTG
TCAAGTCAACCCATCAACAGAGAGCTTGTTGGTTAGGCTTTATTCACACT
TTCAACTTTAAGCTGTCAATTCATTGTCGCTGACAAAATCAACTGCTCAC
ATTTAACCACCAAACGATGTCTGTCACTAGTGAAGCTGGAGACCAGATTT
CTGTGGATCTGAAGATAGCCAGTCTTCGCAGAAAACGAGGAGGAAAGAAA
GGCTCAATAACCAAACGAATCAACTTGAGCGAGGAAATCGTGAATGGCAG
TTGTACCAGAATTCGCTCATTGTACGAATGATTCTTGTTTTGGAAGAAGC
TCACATCATCAACCAAAAACTTGAAGATCTTGGTGATAATACCGAAGGAT
GGTTGGATGACATGTTTCAAACAGACAACATCACGATGATTATCTTGAAC
TGCTAAAAGATAATCCCCCGTCGGAAGCTGGTGGATCAGATTGGCTACTT
GGTAAATTCCTCCTAATGGACAAAGCACAAAAGGAAATCACCAAGGAGCT
TGAAAATTTGGCTCCAATCACAACACAACCAGCAAGAACACTAAACGTAT
CTGCACCAGGATTTCAACCCAATCCAACATTGCCACTGAAAACTATAGTT
AATCCATTCATGACTACCATAGCTCCTACTTGCACAACATTTTCCAATGC
ATTCGACAAATCAACGTATGTTCAACCACAATGTAGTAGAGTGGATCCAT
CACCATTTCAGATTATCAGCACCCCAAAAGAACATGCAGCAAAGGATATA
GTACCGAAGAATCAAACCATTATAGATCACTCATCTATACCAATCAACTC
TAACAAGGTCGATTCATGGATAGATGAGCTCGACGTCAACAAACCACCGT
ATCAACTCGCCACATGGTTCGTACAGCAAGGTCTGCCAAGGATCAGAATA
CCATGGTTTGATGGCACTCCATCAAGCTACGTAGAATTCGTAACCAGTTT
TAGAGATCTTGTCCACAACCAAGGATATTTGACCACGCTTCAGAAATGCA
TTTATCTACATCAAGCTGTACAAGGGGAAGTCAAGAGGTCGATCCAAGGC
TTCAGAAATGACCATGAAGGCTACGTCCTCGCACTCAGAAGAATAAAGTA
CATGTTTGGTTAACGATCAAGAATTGCTGAGTCCGTCATCAGAAAGATTT
TCGACTACGAACCGATTGGCAACAGAGATCAAACTTCGCTCACTGAGTTC
TACTACACATTAAGTGACGGTGACGCTTGGTGACGCTAAATTATTGTCTT
ACCCTTAGAAGTTCCTGTGAACCAAATCTCACCCACTTGGAAGCCTGGCT
TCAAGAAAGGATTCTTGCNTCCTGTGAATCAAATCTCACCCACTTGGAAG
CCTGGCTTCAAGAAAGGATTCTTGCATCCAAAGACTCTTATCTACCAAGA
AAGAATGATGATAGAAAGGATCACAGGGACCATAAAGGTCAAAGAGATTC
AAGAAGTGGACAAGGACAGGGGAAGCAAAATCAATCACAATACAATGGCC
ATCGATCAAATTGGTCTGGCAAAATTGGGGATGGAAAAGGAACAGGACAG
CAAGGAAAAAAAACAAAATCCAAAGACAACAAGTCAAGCAACAAATGCTA
GTTATGCAAGGACGAGTATCAAATTCAACCAGATCGCTTTGAAATGGCAA
AGAAATTGAATCTTTGCTACAACTGCTTGAAGAAGGATCATTTTACTTCA
AAATGCAAATCAAAGAATAATTGTTTCAATGCTTGCTGCAATGAACGTCA
TCATACCAGGCTACATGAATACTTCACTGAACATGTAAAAAAATCGTTCT
CAGGAAACACTCAAGTTGTTGAACCATCTGGTACAGTGTATTCGTCTGTC
GTTCCGGTAAAGCTTCAAGGGCTGGATTCTTCGTCTATCACTACCTGCGT
ACTTTTGGACACAGGTAGTCAAAGCACAGTCAGAGATGACGTTGCCAAGA
AACTCAAACTGAAGAAAAAAGACAAGAAGATCACCATAACAACAATCAAT
GAAATTGGAACAAAAACTAAAGTCAAAGAAACGTCAATGCGTGTCGAAAA
CAGAGATGATGGAATTGGCGTCAACATTGACCACTGCTATATTGTGCCAA
AATCAAGTTTCCACATGCCAAAGCAGCAATATCCTTCAACAATGATGAAA
AAGATGAAGGAGGAGAAAGGCATAACTACACAATGCTCTTTATGAAGAAA
TTGGAATTCTCATGGGAGCAAACGTTCCATCCGTCCACATACCCTTGGAA
GTCAAGGAAGGAAAAAATTCCGAACCACTGGCTATTAAAACAATCTTTGG
ATGGACTTTATTCGGTGCCAGTGGACAACCAGAGATGGTATCAATGAACA
GAATTGTTATCAAACCAGAAGCTGATCTCCATCACTGTGTACAAAGAATA
TGGGATCAAGACTTTATTCAAAACCCATCAGACCGTGACGAAGCCCTATC
GATAGAGGATAAACGGTGCCACGAAAGGCTAGAATCAGAAACTGTTCTCG
CTGATGGAAAGTATCAAGTACCAATGCTTTGGAAGAAAGGAGTAACACTT
TCAAACAACCGTACTGTGGCCGAGAAAAGATTCCACCAACTTCATAACAA
GCTGAGAAGAGAACCAAACCTTCGAAAGCTTTACGACCAAAGTATGACCA
AATATCTTGAGATTGGTTATGCAAGAAAGATGATGTCAGAAGAGGCAGCT
GCCGAACACCCAAGAACTTGGTACCTGCCACATTATGGCGTCTTCAACCC
AAACAAACCAGGCAAAATTCGTCTTGTGTTTGATGCAGCTGCAAAGTTTC
AAGGAACAAGATTGAACGATGCTCTATACACTGGACCAGACCTGCTTAAC
AATATGCTTGGAGTACTGATGAGATTCTGAACACACCACTTTGCATTTTC
CGCAGACATTGAAGGGATGTTCAATCAAGTGAAAGTCAACAAAGAGGACA
CATAATCATTGAGGCTCCTTTGGAAAGAATATATTGATTCACCTGATCAA
CCGGACACATATCAAATGTTGGTTCATATTATGGGTGCCACATGCTCACC
AACATGTGCCAATTATGCTCTAAAACGATGTGCAAGGGATCACTTAGAAG
ACTTCGACCCAAGCACCATTGAAACAATCTTACGATCGTTCTATGTGGAT
GATCTATTAAAATCTACAGAAAACATCGAAACTGGTCAACAACTTATCAA
AGAAGTTATTGACATCATGAAGCTGGGCGGAAATCGCAAAACAAAGTTCG
TTAGCAACGACCTAGAACTACTCAAGAACGTACCAGAAGAATTGATATCA
CCTTTAGTAAATATTCAGATGGAAGATGGACAAAATCATTCTACTAAAGC
ACTTGGCATCACTTGGAATACCAAAGAACATGTGCTAACATTCCTGCCAA
ACATTGTGAGCGCTTCTTCAACCAAGAGGGGAATCCTTAGCGTTGTTAGC
TCGTCACTGTATGACCCACTGGGTTTTCTTTCACCTTACACCACTACTAC
AAAGATGATACTACAAGATGTATGGAAAGATGGCACAAATTGGGATGAAC
CAGTCAACAACGAAATTCAAATAAAGTGGAACAAATGGCAGTCTGGCCTA
TCCACTATCGACATGTTCAAGTTGGAGAGATGCTACAACATTCCGATATT
ATCCAAGATTCAACTACATATCTTTGGTGATGCATCAGAAAACGCTTATG
GTGCAGTTGCTTATCTCGGAACAACCACAGAACCGATCAACGTTAGCTTT
GTATCAGCCAAAGGAAGAGTTACACCAACAAACCAAGTTCCTCTACCAAG
ATTGGAATTGAGTGCCGCAGCAATTGCAGTACGATTATACAGATGAATCA
TCAAAGAAATCGACTTGCAAATCGAGGACAGTCATTTTTGGAGTGACTCG
ACACTGACCCTCCAATACATTACAAATGAAAGGAATCGTTTCAAGACCTT
CGTAGCAAACAGAAGACTCCTCTTTTGGCATAACCTACACAATGGCATCA
CGTTAATGGTGAAGAAAATCCTGGTGACATTACCAAAAGAGGAGTCTTTA
GCGTAGAAGAACTACTTCAGGGAGACAAAAAACGAAGTTAGCTCAAGGAC
CATCATTTTTGATGGCAGACGAATCAACTTGGAAGGACAATAAGATTGAA
GAAATCGACCCTGGTGATACTGAAATCAGAAAAACCTTCATTCGTTATAT
CCGTAACCTTCGAGCAGAAGCTAAAAGGAAACGTGAGAATTCCAAGAAGA
GACGAGACAAAGGAAAACCATACCTAACACCAGAAGAAATCAAAGCTGCA
ACAATTATCGTCATCAAGGATGTTCAGCTATCAGAATTCGATGAAGAAAT
CGATGACCTTACAAAGAAACATGAAGTTGAAAAGGAGAGCAAACTCTATC
AATTCAAACCATTCCTGGACAAAAATGGTATCTTGAGAATCGGCAGTAGA
CTCGAGAATGCCTCTGTCTCATTTGAAGCAAGACATCAAATTGTTATCCC
CAAAGGACATGTTGCATCACTCATTGCTGAGAAATATCACAAAGAGAATG
GTAACAGTAGTGTAAATCAACCCTTATCCGAAGTTAGACAGAAATATTGG
ATATTATGTGGAAGACAAGTAATCAAAACAGTCATCAAAGCGTGCATGGA
ATGTCAAAGATTTAAAAACAAACCTGAGATTCCAATGATGGCTGACTTTA
CCTGCCAGCAGAATGCAACTCAACCAACCACCATTCACCAACACTGGTGT
GGATCTTTTTGGACCAATCCTCGTTAATCAAGGTCGCAAACGTCTGAAGC
GCTGGGTGTCACTATTTACATGCATGACAGTCCATCTTGAAGTTGTAGAA
AGTATGGAAACTGACGATTTTTTAAACGCACTCCAACGCTTCATCAGCCG
CAGACAGAAACCAAGGAAGCTGCTCTTGGATTGTGGCTCAAACTTTAAAG
GAGGGGGCGTACGGGGGTCGCAGACACCAAAATACCGACGCATATTTCTT
GGATTACCGTCAACACCGACAGCAAAATTTGGTAAAATGCTTAATTTTGT
CACCGCATGGCATGTTTGACACCGAAATTCCGTCACTTTTTTCTTCAAAC
ACCGAAACACCGATAGAGAAAAGGGTTAATACCGTCACTCGGGAGATTGA
ATGGCAATTCGACCCTCCATCGACGTCACACATGGGTGGAGCCTGGGAAG
GACTAGTTTGAACCGTCAAAACAAGCATGAAATTCACCTTGAAGAATCTA
ATATTAACCGAATTTCAACTTATGTCATTCATAACAGAAGTGGAAAATAT
CGTAAACAGTCGTCCACTAACTCCAATCAGTGAAGATCCTAAAGACCGAA
CCACCTGCTAAAAGGATTCAACAACGCAGAAGTCCTACTCAATACAGATA
AAGATTTGGACATCACAAAATGCTATCGCAAACGATGGAAGCACATTCAA
ATGTGCTTAGAACACTTTTGGAGTAGATGGAGATCTGAATATCTCCCAAC
ACTGAAAACAAGAGGCAAATGGGTCGAAGAAAGGAGAAACCTGCAAGTTG
ATGATATGGTCCTCCTGCACACGGATGCACCAAGAGAGAACAATGGCCAC
TTGGTATCATTGTGGAAACAATAGCCAGACGAGACGATCGAATTCGAATG
GCGTATGTAAAGGCGAATGCTGGTACATACCTCCGACCCGCTTCGAAGAT
TTACAGACTTGAACTTCCCAACGTTCGTTAAGGGGAGGGGTATATTGTAA
AACATGTTGTGTTATTACTGACTTCGACGCACACTCCACCATCAAAGGAG
CTTCTTTGTGTTTAATTGCTGCTGAACTGACGTCATATTCCCAATTGACA
TGCGGAATTAATTTTGTTTACATTTTAAAATGAATAGTTTATTCGATATG
CGTATTAATTCCCAATTGACTTAAGAATTTGTTTGTAATTTATCTAGTCC
TCTTTCTTTTGTATAATTGTATTCCCTAATGACATTGTTGGATATTTATG
TTGATATGCTATAAAAGCTGTGGAAATTTTCATTTAATCAGAGAAGGTTG
TGAGGGTAGCTCACGCCACATTTTGAAATGGTTTTTTAACAGAACTCTGA
AGCATTTGCCTATTGTATGTCAAGAGCAGCCATTGATCAATACACAAGAA
CAACAGCTTTGGAGCTTGCACCACACCAAGTCAGATGTAATGCTGTCAAC
CCTGGAGTAACCGACATTCATAAGAGAGCTGGGAAGGAAGGTAGATGCAG
ACATGATTGATTAAAAGATCAGACTAGAGTCTACTTCTAACGGAACTTTG
CTTTCTGATGAATCTGATGGGGCTGAGCCAAGTGAAGTAGACTAGAGGAT
ATTACTATCTTGGAATTTTTCACTTTTGTTTTCAAAAATTTATATAAAAA
CAATGAAATATTCTAAACCCCAGTTTATGAAACTATGATAAATACATAAA
AAAGTACCTCCAAAACTCGGAAAAAAAGATTCCTATTTATCAATAATTCT
ATTCCTACAATTTCTTCTGATTTCACCCTCTTGAAAGTGACAATTAGTTT
AACTCCTAGTTTTCAGCTATTTCTTTCTTCATCACTTTCAGTTCATACAG
CATCGTGAAGAAACACACCGTTTTGGTCGTGTAGGAACTGTTGAAGAAGT
AGCATCGGTGATTGCATTCCTGGCTTCAGATAGTGCTTCGTTCATCACTG
GTGCTACCATTCCTGTGGATGGTGGAAGACAGCTCTTGTGTCCAAGATAA
GAATTTTAAATTTCTTTGGAAAATTGACATCAGGGTTAACCTTCTGAGTG
AATCCAAGGGTTATATCACTACATATACATCATATATATCATACAGTACT
GGCATAGTTGAGTCTTTATTAAAATTTTCATATTTTTCTGTTTTAGAATG
AATTTTTTTATATTTTTTGGTAAAATGTCACAAATTTGGTTTAGCTAAAG
TCTTGATGGGTCTGTTCCGTCAAAAAGATGGATAGAAAGAAGATCTTTTT
AACAATCTTGTTATGGGTTGGCGGGTCTGATGTTTTTCAATATTGACTCC
CATCTGTTAATGTGGCTCACATGCCAAGTGAATGTACCTTCGCCTGTTAA
AAGATATTGGGTTTGGCCTCGTGATGAACACTGCTGTATGTCCTAGTGTC
GTTGTACTTTCAAAGCTTACGCCATGACTCTTATCTGTAGAGTCCTGATG
CTTAGCTTGGCAGTGATTCCTACTTCCTTTGGGTAGAACCCATTTCGAGA
GATCAGAGAGCATTATGTCTATTGCTATAGTATCGCAATGCAAAGTAGAT
TACAAATATCTTATTCATATTTTGGGGTTACAGTATGATGGTTTCAAAAA
TTGACTTTTTTCATTTTTTAATATTTTTCCAATATAAAAAAGGTCTTTCT
TTTTGTTTAGGTCAAAAAATATTTTAAAATGTCATTTGACTTGAATGGAA
AAGTTGCTTTGATCACAGGTAGAGACCAAATTTTGTTTTATTCTTTTTCA
TTCGTAAAATTTCTTTTCCCCACCAGAATTCTTTAATCATTACAACAAAA
ATATTTATTTTGTCCAAAATAATAATTTGAAGAAACCTGAAGAAACGTGG
ACATTGGTACTCTATAATTTGACTTTTCTGACAAATACTTTTTACATATT
TCTTGGGATTTTTGACTAATTTTGTAAAAATATGGCTTGATTTCTTTGAT
TTAAGGAGAAAACTTGAAAACCACTAGTCAACTTGCGAAAGTTGGCATCT
CTAGGGAATATGTATTAATAATTTGGTTTTTCATTATTTCCACCAGGAGC
AAGCTCAGGTATTGGAAAAGGCACAGCTCTCTATTTTGCGAAGAATGGAG
CCAGATTGGCCATCACTGGAAGAAAGGAAGACAATTTAAAAGAAGTTGCA
AAAGAATGTGAAGAAGTTAATCCAAATAAAGAGAAGGTACGATAATTTTG
TGAAATTGTCCATGAAGAAATAATTAGCATTGAAATATGCTGGTTTGCCA
AGACAGGATCTCTAGGGAAATAATATTTTCATTCTTTTGTCATGGAAAAA
GAAATCCATGATATCAGACGGCTAGAACTTAGGATGTTTGCTTACAGAAA
GTCTATATTTTACGTGTAGCTCTTTCAAGCTGAAACTTTAATTTTTATGT
TTTTATTGTCAGGTGCTGACATTAGTTGGTGATTTAAGCAAAGAAGAAGA
TACTGAACGAACTTTCAAAGAAACTATCAACCACTTCAATCAATTAGATA
TTTTGGTAAGATTGAAAATATATGACGTTTTAAAGTGTCCATTCTTTTTT
AGACTGCAATAGTTATTCTTCTTCTTACCATTTTTCAAACAATATTTAAG
TTCTAACAAATTATATACTGTTTATTTCTGAAGATGATTATTAAATTATT
CAAAATATATGATCAAAATTAAAAACTGCTGGTCAAATTTCATCGAAATT
ATATATTTACTGTTAAAAATATATTTAAGAACCCTATGTTATTTGAGAAA
AATGAATCAACAAATTTTTGAAAATCATTATGAAGAAAAAAAGAAGATCT
TTTTATCCTATGTTGTTGAAAACTTTGATGCCTTCTGATATCAACTATAC
AAGTTCTATTTTTTCTCATAAAATTACTGTATCAAAAGGTTCTGTGTACA
GCCTCTAGAAAACCCTGTTTTTACTGTGTTTTTTTTCTTCAACGGACCCC
GGGGGTATTTGGGCAATAAGGAATACATGGATGTACCGCTGATCAGGGTA
CCTTTTTCACCTCCATGAGTCCCAGGTAGGGTCGCAAAAACACGAAAATA
CAAAAATCAGTCCCTCGTAGCGTAGGGTACCTTTTTGGGGGAATTTGGGA
AAGAATGTGGAAACTTTTGAGAACATTTGGGAATTTCAGTCCCATTCAGA
GTCACTTAAAAAAATAAGAGTCCCACGTAGGGTACATTTTCTCCAGCTGC
ACAGCCCCGTCGATCAGCAAGGGAAGTACCCCCAAGCAACAGACACATAC
TGACATTATGTTATTTTCAGGTGAATTCTGCAGGAATAGTGATGAATGGT
ACAGCAGAGTCAACATCTCTTCAAGATTACGATTTACAAATGAACATCAA
CGTCCGGTAGGAACAAACCAAACTCTCTATTCGGTTTTTGTTGAGTCTCT
CTAAGGCCCCTCTTATCAATTATTTAAAAGGATGTATTAAAAGGTTTCAT
TGAAATTCAGGTCATTTAGTTTGGATAGATAAAACTTCAGTCACGTTGAA
TTTTTGGACTTACCCCCTTTTGGTCCGTTCGTCTGTCCATCCGTTCGTTA
CCAACTTCTCTCGAGATTGGCTCTTTCATTCTTTATGTTTTTTCCACAAA
GATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAAA
AAAGTTTTTGGGCAATTTTGGGCCTAAAAAAGGCTAAAAACGGGTACATC
AATGTTCTAAGCCAAATTACTCAATTTTTTTATGAGATAGATATTTTTTT
TCTCACGAAGTCTTGAATGAAAGAATATTTCAACAGCATGAAATTTTGGT
TTCTAAATGTTTTATTTATAAGAAACAAACGACTAATTTTAATAGATCGT
CACTATTTGTGTTCTGAATGATTGTTTAATGGTCACGTCACGATCAAATA
TAAATGTGTTAAATGTATAACCAGGTAGGTCCATAAAAGTATCGCTTGTT
TTTATTCCTTTTAGATCTATCTTTCACCTGACGAAATTGGTAATTCCTCA
TTTAATAAAAGTTAAAGGTACCAAATCTTTCTTTTCAGGAGAATCTAAAG
CGTTGATCTTTTGATGATCTTTATAGTTCCCACACCCACACATACACAAC
TTTGATGATCTTTCTTCCTTCTCAATACAGGAAATATTGTTAATGTATCA
AGTATAACAGGATTGCGCTCGGTGAGTCAAACTTTGTTGATTAATTCCTA
TAATTTCTATTTTTCACTTTCACGATCGATTCCCAATTAGTAAGAAACTT
TTTTAATGAGATTTTTACCTAATACAAATTTTGTTACATTTTTAACAGTT
CCCTGGCGTCTCAACATATTGCATGTCAAAAGCAGCCATTGATCAATACA
CAAGAACAACAGCTTTAGAGCTCGCACCACACCAAGTCAGATGTAATGCT
GTCAACCCTGGAGTCATTGTAACAGAACTCCATAAGAGAGGTGGCATGTC
TGATGAAGCTTATGAAAAGGTTTGTTGTAGAAAGCTGTGCGTAATCTGAA
CATATTGCAGGTCTTAAAAGGGATAGCCAGATGGATAATATCCGGCCTTT
TAGATTCCAAATCTGGACCTGATCTAAATCTCAGAGGCAAATATTTTTGA
GAAGTCGAGATATTCATGTTACATGTTCTCGATTTTCAGTCAGAAAATTC
TGACGTTCTGACGTAAGAACCCAATTTTAGTGAACACAAAGTATCATATC
AATCTCAAATTTGAAAAATAATTTAGACAAAGAATTTTACCCAGAGCCAA
GATGGATATCTCCGCGAATATCCAGAGGTATATGGATAAAAATGACCTCG
TAATTTACAAATTCTTTCTGGAACCTCTCATTCCACAAGTTATCAAAAAT
GGAATATCCATAATTCTTTATGACTGCTAGATTAAGTGATTTCTTTTATG
ATTTGTATTCGNCAAAAATCGAATATCCATAATTCTTTATGACTGCTAGA
TTAAGTGATTTCTTTTTAGATTTGTATTCATTAGCAGGCAAAGTTTTCTT
TTTTTAACCGTTTATTACTTTTTCAGTTTTTAGTGAAATGTCAATCAACA
CACGCATTGGGACGTGCTGGTAATGTTGATGAAGTAGCATCGGTCATTGC
TTTCCTGGCTTCAGATAGTGCTTCCTTTGTCACTGGTGCTACCATTCCTG
TGGATGGTGGAAGACATGCTATGTGCCCTAGATGAGATTTGAGGCTGAAA
TTGTATGGGGGTTTTGATAGAAATTGGTGTTTTTTGGGGAAGATCAACTT
TTGCAAACTGAAAGTTTTTGTATTTTCATTTCCAGTAAAGATTTTGTAGA
ATTTATTTTTATAAGAGTGGATTTATGAATTTATTAGAAAACAAAGTAAG
TAAGTACAATTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004727XLOC_004727Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008445-exon-sc0000085-1575043694:110569..110608TCONS_00008445-exon-sc0000085-1575043694:110569..110608Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1575043694:97141..97198TCONS_00008445-exon-sc0000085-1575043694:97141..97198Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1575043694:96673..96812TCONS_00008445-exon-sc0000085-1575043694:96673..96812Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1575043694:96354..96446TCONS_00008445-exon-sc0000085-1575043694:96354..96446Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1575043694:95503..95588TCONS_00008445-exon-sc0000085-1575043694:95503..95588Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1575043694:94842..94894TCONS_00008445-exon-sc0000085-1575043694:94842..94894Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1575043694:94688..94728TCONS_00008445-exon-sc0000085-1575043694:94688..94728Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1575043694:94390..94560TCONS_00008445-exon-sc0000085-1575043694:94390..94560Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1575043694:93495..93832TCONS_00008445-exon-sc0000085-1575043694:93495..93832Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:110569..110608TCONS_00008445-exon-sc0000085-1510915933:110569..110608Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:97141..97198TCONS_00008445-exon-sc0000085-1510915933:97141..97198Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:96673..96812TCONS_00008445-exon-sc0000085-1510915933:96673..96812Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:96354..96446TCONS_00008445-exon-sc0000085-1510915933:96354..96446Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:95503..95588TCONS_00008445-exon-sc0000085-1510915933:95503..95588Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:94842..94894TCONS_00008445-exon-sc0000085-1510915933:94842..94894Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:94688..94728TCONS_00008445-exon-sc0000085-1510915933:94688..94728Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:94390..94560TCONS_00008445-exon-sc0000085-1510915933:94390..94560Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1510915933:93495..93832TCONS_00008445-exon-sc0000085-1510915933:93495..93832Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:110569..110608TCONS_00008445-exon-sc0000085-1491911889:110569..110608Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:97141..97198TCONS_00008445-exon-sc0000085-1491911889:97141..97198Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:96673..96812TCONS_00008445-exon-sc0000085-1491911889:96673..96812Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:96354..96446TCONS_00008445-exon-sc0000085-1491911889:96354..96446Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:95503..95588TCONS_00008445-exon-sc0000085-1491911889:95503..95588Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:94842..94894TCONS_00008445-exon-sc0000085-1491911889:94842..94894Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:94688..94728TCONS_00008445-exon-sc0000085-1491911889:94688..94728Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:94390..94560TCONS_00008445-exon-sc0000085-1491911889:94390..94560Clytia hemisphaericaexon
TCONS_00008445-exon-sc0000085-1491911889:93495..93832TCONS_00008445-exon-sc0000085-1491911889:93495..93832Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:93495..110608 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
99.137	103.913	59.9641	48.7676	12.1922	9.13457	19.4594	18.6712	24.5604	29.1924	24.8313	27.5733	31.8077	36.3901	39.3442	44.4427	34.1706	36.7787	16.5806	16.18	26.3263	26.7304	47.0124	42.1295	32.7777	37.469	29.8441	30.4193	35.9899	29.716
Blast
[Close]
BLAST of TCONS_00008445 vs. Swiss-Prot (Human)
Match: DCXR (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 4.340e-39
Identity = 87/258 (33.72%), Postives = 134/258 (51.94%), Query Frame = 2 
Query:   59 MSFDLNGKVALITGASSGIGKGTALYFAKNGARLAITGRKEDNLKEVAKECEEVNPNKEKVLTLVGDLSKEEDTERTFKETINHFNQLDILVNSAGIVMNGTAESTSLQDYDLQMNINVRSIFHLTKLVIPHLIK--VKGNIVNVSSITGLRSFPGVSTYCMSKAAIDQYTRTTALELAPHQVRCNAVNPGVIVTELHKRGGMSDEAYEKFLVKCQSTHALGRAGNVDEVASVIAFLASDSASFVTGATIPVDGGRHA 826
            M   L G+  L+TGA  GIG+GT       GAR+    R + +L  + +EC  + P       +  DL   E TER     +     +D+LVN+A + +       + + +D    +N+R++  ++++V   LI   V G IVNVSS    R+    S YC +K A+D  T+  ALEL PH++R NAVNP V++T + +    SD    K ++   +   LG+   V+ V + I FL SD +   TG+T+PV+GG  A
Sbjct:    1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP-------VCVDLGDWEATERA----LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ-ATWSDPHKAKTML---NRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA 243
The following BLAST results are available for this feature:
BLAST of TCONS_00008445 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCXR4.340e-3933.72L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
back to top