TCONS_00008441 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008441
Unique NameTCONS_00008441
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1366

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008441 ID=TCONS_00008441|Name=TCONS_00008441|organism=Clytia hemisphaerica|type=transcript|length=1366bp
GTGATTCCTACTTCCTTTGGGTAGAACCCATTTCGAGAGATCAGAGAGCA
TTATGTCTATTGCTATAGTATCGCAATGCAAAGTAGATTACAAATATCTT
ATTCATATTTTGGGGTTACAGTATGATGgtttcaaaaattgacttttttc
attttttaatatttttccaatatAAAAAAggtctttctttttgtttaggt
caaaaaatattttaaaatgtcatttgACTTGAATGGAAAAGTTGCTTTGA
TCACAGGAGCAAGCTCAGGTATTGGAAAAGGCACAGCTCTCTATTTTGCG
AAGAATGGAGCCAGATTGGCCATCACTGGAAGAAAGGAAGACAATTTAAA
AGAAGTTGCAAAAGAATGTGAAGAAGTTAATCCAAATAAAGAGAAGGTGC
TGACATTAGTTGGTGATTTAAGCAAAGAAGAAGATACTGAACGAACTTTC
AAAGAAACTATCAACCACTTCAATCAATTAGATATTTTGGTGAATTCTGC
AGGAATAGTGATGAATGGTACAGCAGAATCAACTCCTCTTCAAGATTACG
ATTTACAAATGAACATCAACGTCCGgtcaattttttatttgacgaaATTG
GCCATCCCTCATTTGATTAGAAGTAAAGGAAATATTGTGAATGTATCAAG
TGTTACAGGATTACGTTCGTTCCCTGGTGCTTCAACATAATTGCATGTCA
AAAGCAGCAATTGATCAATACACAAGAACAACAGCTTTGGAGCTTGCACC
ACACCAAGTCAGATGTAATGCAGTCAATCCTGGAGTCATTGTAACACAAC
TCCATAGAAGAGCTGGAATGTCGGAAGAGGACTACCAGAAGTTTCTAATA
AAATGTCAGTCAACACATGCATTGGGACGTGCTGGCAATGTTGATGAAGT
AGCATCGGTCATTGCATTCCTGGCTTCAGATAGTGCTTCGTTCGTCACTG
GTGCAACCATTCCTGTGGATGGTGGAAGACATGCTATGTGTCCAAGATGA
GGAGCATTTGAAGATTTGTTTgtacaaaatgaaaaagtgaCATATTTCTT
CTTGAGGAAGCTGCAAAGCTTCCAATTCGAGTACTTTTATTAATTTGTAG
GAGGTGGACTGTTTCGACATATTTCTTCTTGAGGGAGCTTGAAACTTTTA
AGTTCAAGtactttattgattttgtagaaGTGAATTATGGATGTGACTCA
ATGGCTCAAGGAACCTAAATTGGGAGAATTTTTGGAGACGAAATTTTAAT
GTTTCATATTATTGAAGCTATAGTTTTTTATGTAAtatgtagtttttttt
tttaattttgataatttatttAAAGATTTGACATTGGAaaataaacaata
gaaaaataaactagAA
Run BLAST on NCBI

transcript from alignment at sc0000085:89302..97396-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008441 ID=TCONS_00008441|Name=TCONS_00008441|organism=Clytia hemisphaerica|type=transcript|length=8095bp|location=Sequence derived from alignment at sc0000085:89302..97396- (Clytia hemisphaerica)
GTGATTCCTACTTCCTTTGGGTAGAACCCATTTCGAGAGATCAGAGAGCA
TTATGTCTATTGCTATAGTATCGCAATGCAAAGTAGATTACAAATATCTT
ATTCATATTTTGGGGTTACAGTATGATGGTTTCAAAAATTGACTTTTTTC
ATTTTTTAATATTTTTCCAATATAAAAAAGGTCTTTCTTTTTGTTTAGGT
CAAAAAATATTTTAAAATGTCATTTGACTTGAATGGAAAAGTTGCTTTGA
TCACAGGTAGAGACCAAATTTTGTTTTATTCTTTTTCATTCGTAAAATTT
CTTTTCCCCACCAGAATTCTTTAATCATTACAACAAAAATATTTATTTTG
TCCAAAATAATAATTTGAAGAAACCTGAAGAAACGTGGACATTGGTACTC
TATAATTTGACTTTTCTGACAAATACTTTTTACATATTTCTTGGGATTTT
TGACTAATTTTGTAAAAATATGGCTTGATTTCTTTGATTTAAGGAGAAAA
CTTGAAAACCACTAGTCAACTTGCGAAAGTTGGCATCTCTAGGGAATATG
TATTAATAATTTGGTTTTTCATTATTTCCACCAGGAGCAAGCTCAGGTAT
TGGAAAAGGCACAGCTCTCTATTTTGCGAAGAATGGAGCCAGATTGGCCA
TCACTGGAAGAAAGGAAGACAATTTAAAAGAAGTTGCAAAAGAATGTGAA
GAAGTTAATCCAAATAAAGAGAAGGTACGATAATTTTGTGAAATTGTCCA
TGAAGAAATAATTAGCATTGAAATATGCTGGTTTGCCAAGACAGGATCTC
TAGGGAAATAATATTTTCATTCTTTTGTCATGGAAAAAGAAATCCATGAT
ATCAGACGGCTAGAACTTAGGATGTTTGCTTACAGAAAGTCTATATTTTA
CGTGTAGCTCTTTCAAGCTGAAACTTTAATTTTTATGTTTTTATTGTCAG
GTGCTGACATTAGTTGGTGATTTAAGCAAAGAAGAAGATACTGAACGAAC
TTTCAAAGAAACTATCAACCACTTCAATCAATTAGATATTTTGGTAAGAT
TGAAAATATATGACGTTTTAAAGTGTCCATTCTTTTTTAGACTGCAATAG
TTATTCTTCTTCTTACCATTTTTCAAACAATATTTAAGTTCTAACAAATT
ATATACTGTTTATTTCTGAAGATGATTATTAAATTATTCAAAATATATGA
TCAAAATTAAAAACTGCTGGTCAAATTTCATCGAAATTATATATTTACTG
TTAAAAATATATTTAAGAACCCTATGTTATTTGAGAAAAATGAATCAACA
AATTTTTGAAAATCATTATGAAGAAAAAAAGAAGATCTTTTTATCCTATG
TTGTTGAAAACTTTGATGCCTTCTGATATCAACTATACAAGTTCTATTTT
TTCTCATAAAATTACTGTATCAAAAGGTTCTGTGTACAGCCTCTAGAAAA
CCCTGTTTTTACTGTGTTTTTTTTCTTCAACGGACCCCGGGGGTATTTGG
GCAATAAGGAATACATGGATGTACCGCTGATCAGGGTACCTTTTTCACCT
CCATGAGTCCCAGGTAGGGTCGCAAAAACACGAAAATACAAAAATCAGTC
CCTCGTAGCGTAGGGTACCTTTTTGGGGGAATTTGGGAAAGAATGTGGAA
ACTTTTGAGAACATTTGGGAATTTCAGTCCCATTCAGAGTCACTTAAAAA
AATAAGAGTCCCACGTAGGGTACATTTTCTCCAGCTGCACAGCCCCGTCG
ATCAGCAAGGGAAGTACCCCCAAGCAACAGACACATACTGACATTATGTT
ATTTTCAGGTGAATTCTGCAGGAATAGTGATGAATGGTACAGCAGAGTCA
ACATCTCTTCAAGATTACGATTTACAAATGAACATCAACGTCCGGTAGGA
ACAAACCAAACTCTCTATTCGGTTTTTGTTGAGTCTCTCTAAGGCCCCTC
TTATCAATTATTTAAAAGGATGTATTAAAAGGTTTCATTGAAATTCAGGT
CATTTAGTTTGGATAGATAAAACTTCAGTCACGTTGAATTTTTGGACTTA
CCCCCTTTTGGTCCGTTCGTCTGTCCATCCGTTCGTTACCAACTTCTCTC
GAGATTGGCTCTTTCATTCTTTATGTTTTTTCCACAAAGATGCATAACTA
TAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAAAAAAGTTTTTGGG
CAATTTTGGGCCTAAAAAAGGCTAAAAACGGGTACATCAATGTTCTAAGC
CAAATTACTCAATTTTTTTATGAGATAGATATTTTTTTTCTCACGAAGTC
TTGAATGAAAGAATATTTCAACAGCATGAAATTTTGGTTTCTAAATGTTT
TATTTATAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGT
TCTGAATGATTGTTTAATGGTCACGTCACGATCAAATATAAATGTGTTAA
ATGTATAACCAGGTAGGTCCATAAAAGTATCGCTTGTTTTTATTCCTTTT
AGATCTATCTTTCACCTGACGAAATTGGTAATTCCTCATTTAATAAAAGT
TAAAGGTACCAAATCTTTCTTTTCAGGAGAATCTAAAGCGTTGATCTTTT
GATGATCTTTATAGTTCCCACACCCACACATACACAACTTTGATGATCTT
TCTTCCTTCTCAATACAGGAAATATTGTTAATGTATCAAGTATAACAGGA
TTGCGCTCGGTGAGTCAAACTTTGTTGATTAATTCCTATAATTTCTATTT
TTCACTTTCACGATCGATTCCCAATTAGTAAGAAACTTTTTTAATGAGAT
TTTTACCTAATACAAATTTTGTTACATTTTTAACAGTTCCCTGGCGTCTC
AACATATTGCATGTCAAAAGCAGCCATTGATCAATACACAAGAACAACAG
CTTTAGAGCTCGCACCACACCAAGTCAGATGTAATGCTGTCAACCCTGGA
GTCATTGTAACAGAACTCCATAAGAGAGGTGGCATGTCTGATGAAGCTTA
TGAAAAGGTTTGTTGTAGAAAGCTGTGCGTAATCTGAACATATTGCAGGT
CTTAAAAGGGATAGCCAGATGGATAATATCCGGCCTTTTAGATTCCAAAT
CTGGACCTGATCTAAATCTCAGAGGCAAATATTTTTGAGAAGTCGAGATA
TTCATGTTACATGTTCTCGATTTTCAGTCAGAAAATTCTGACGTTCTGAC
GTAAGAACCCAATTTTAGTGAACACAAAGTATCATATCAATCTCAAATTT
GAAAAATAATTTAGACAAAGAATTTTACCCAGAGCCAAGATGGATATCTC
CGCGAATATCCAGAGGTATATGGATAAAAATGACCTCGTAATTTACAAAT
TCTTTCTGGAACCTCTCATTCCACAAGTTATCAAAAATGGAATATCCATA
ATTCTTTATGACTGCTAGATTAAGTGATTTCTTTTATGATTTGTATTCGN
CAAAAATCGAATATCCATAATTCTTTATGACTGCTAGATTAAGTGATTTC
TTTTTAGATTTGTATTCATTAGCAGGCAAAGTTTTCTTTTTTTAACCGTT
TATTACTTTTTCAGTTTTTAGTGAAATGTCAATCAACACACGCATTGGGA
CGTGCTGGTAATGTTGATGAAGTAGCATCGGTCATTGCTTTCCTGGCTTC
AGATAGTGCTTCCTTTGTCACTGGTGCTACCATTCCTGTGGATGGTGGAA
GACATGCTATGTGCCCTAGATGAGATTTGAGGCTGAAATTGTATGGGGGT
TTTGATAGAAATTGGTGTTTTTTGGGGAAGATCAACTTTTGCAAACTGAA
AGTTTTTGTATTTTCATTTCCAGTAAAGATTTTGTAGAATTTATTTTTAT
AAGAGTGGATTTATGAATTTATTAGAAAACAAAGTAAGTAAGTACAATTT
GCGAAAAGACTTCAAAGTTGAAGACTAAAGAGCTAAATTACGAATCACCA
AGTAGTATTGTAAAGTGTAGCTATTAAGCTAAAGAAGGGATCAGAAATTT
TGTTTTTTTTCGATTTAAGAGTGGGGGGATAAGATTAAAGAAACACACAC
ATTTGGTTATTAGTTATTTAGCTTAAAAATAGCATTGACCACATACTTTG
ATAAAAAAAGTCGTCAGTTTTTACCCGACTCCTGCATTGATAAAATTATT
TAAGTCTCCTTCTAGAATTTATAAGCTCCTTTAAAGTGATATACAAACTT
TGGTATCATTTCAGAGAAAACTAATATTAATACTACTATAAAAATGTCAT
TTTGCTTAAAGGGAAAAGTTGCTTTGATCACAGGTAATAATTTATAATTT
TTAAACGTTACTTTTTTCTGATTTTCTAATACAATGAATTGAATTGAAAT
ATCTCGGTTACTCCTTTTCTTCCGAATTTACACCATTTCAGGGGCAAGCT
CAGGTATTGGAAGAGGTACAGCTCTCTATTTCGCAAAGAATGGAGCCAGA
TTAGCCATCGCTGGAAGAAAGGAAGACAATTTAAAAGCAGTTGCAAAAGA
ATGTGAAGAAATTAATCCAAATAAAGAAAAGGTATTGGACGGAAAAGAGT
AATATAAATAGGTCGAAGGGCCTCTAATTGATTTATATTTAGCTGCCAAT
GGTCAAAAAGTAATTTCGACATTGGACCTTTAACTTCGATGTCAGCAATT
TGATCTGTTTGTTATTGAATGTCTCATGGGTGAATGAAATTTTTTAAATA
AAATTATTTACAGGTGTTGTCAGTAGTTGGTGATTTAAGCAAGGAAGATG
CCACAGAGAGAACTATGAACGAAACAATGGATCACTTCAAACAGTTGGAT
ATCTTGGTAAGATTTTCGTTCGTTTACAAAAGTAACAACCATTAGAAGGC
GAAGTTACACGCAAGAAAGATATCAGTTTTAGCTCCTTGTTGACTAAAGG
CCAAGGTAAACGATTCCAACATTCCATCCAACATGCCATTTTCTCTCTGT
TGGACAAAATGTTGGAATCGTTTACTCGAATGCAAAACTCGGAAAGGAAG
AAAAAATTATGTTGGAAGAAGAAAAAAAGTGTTGGATGGGAGTTTGATCG
CAATCAAACATTTTGTCCGACATTTACTTCTTTTTTTCGTGTTGGATCAT
GTTGGATTCGTTTACTCAGCTCACATTCAACATTTGAAAGGGAATGACGT
CATTAGAAAGAGAATCGAATGTTTTTTTGTCAAAAATTCGAAAAATCTCG
TAACAAATTTAAAAAGATGGTAGAGAAGCTACTAGCTCGAATGTTGTTTT
TTTCGGAAAATAGACCAAGGGGCACTGAAATTAAGCGATCTATCGTAGAG
GTGTGACCCTTTAAAGGTACGTTTTTCAGGCTTCCCAAAATACACTGTAA
GTGTGTAAAAAATGAGAACATAGTTTCTGTTACAAAATTTTCGAAAATTT
GACCATTTTTTGCCTTGAAATAGATAGATAAACTTCAAGAAATTGCACCA
TAAGAGTCGATTTTTCGCCAGAATTTTCTCTGCATTGTAAGGGTCCAATT
GTTAGACTATAATTTTTGTCCGCATGAACAGCAGTAGTGGCACTTGTTAC
ACTGGGTATAAAAATCCTAGCCATTTCTAATTTGAAAAGAATGAATTAAA
AAAAGAATGAATGAACACCTATGTTGCGATGAAAACGATGTTGGACAATG
TAGGTAAACGATTTTTAGGAGATCCAACATCATTCCTAAATTCATCCAAC
ATTTGTCCAACATTTCAATTTCTATGTTGGATGAAATGTTGGAATCGTTT
ACCTCGGCCTTAAACCAACTAACTAAGTTTTTCGACTTTAAAAGCTTTCC
GATAGTCGAATCTTCCAAAGTGATGTAGATTCTAGGGGGGGGGGCGTACG
GGTTTGACGGTGTAACGGTATTAACCCTTTTTTCTATCGGTGTTTCGGTG
TTTGAAGAAAAAAGTGACGGTATTTCGGTGTCAAACATGCCATGCGGTGA
CAAAATTAAGGAATTTACCAAACTTTGCTGTCGGTGTTGACGGTAATCCA
AGAAATATGCGTCGGTATTTCGGTGTCTGCGACCCCCGTACGCCCCCCTC
TTCTAGTTACCTTTGATGAATTAAGTTGATTGGAGCAAAATTTGATCGAA
TTCATAGCAAAGCTTAAGATCTCTTTGAAAAGACTTAATCTTCCTTTCAG
GTGAATTCTGCAGGAATAGTGATGAATGGTACAGCAGAATCAACTCCTCT
TCAAGATTACGATTTACAAATGAACATCAACGTCCGGTATCAGTTTTTCA
TTGTATAGTGAAAGTGAAAGTTATTATTTTTTACTTTTTTTTAAAGCTAT
AAATAATCCGATTGAGGGGCTAAGATATGGAAGAACTTGCTGCTGGCGGG
AGTCAATGGTTATTTTCTATTTTCTATTGGACATCATTACAGGCAAAGTG
ATTAATCGATCTTCTAACTCTCTCACTTCATTCCATTTCAGGTCAATTTT
TTATTTGACGAAATTGGCCATCCCTCATTTGATTAGAAGTAAAGGTATCA
AAACTGCCAAAAATCTTCCATCTTACTCAGTTCACGAGTCTTATCGTCTA
CGAGAAAAAACTTGGACCGATGGTTTAAAAACGATTGTTTTCTTCTTCAG
GAAATATTGTGAATGTATCAAGTGTTACAGGATTACGTTCGGTGAGAAAT
TTAACATTTCCTTCAAAGCAAAGCACTGAATCGCACGAATCCTTAATATC
TGTGCATGTTCACAAAAAAGTAACCTTCAAATGTTAAGATTACAAATGCG
AATAACATTTGATAGAGTTTGAATGATATTGCTATTTTGTACCCATTGAA
AAGATCATCGTGGATGGAATATTATCATGTGGCATTTTTGGAGTGATCCA
AATTTCTTCACTTTCAGTTCTCTTTCAGTTTTGATTCTCCTCGTGAATCT
TTTTTTTTGAATGAGCACAAAATCCCAGACTAACCCGCACTAAATTATTC
GTCGCATTTGTTATTTGAATGACAGCTGTACTTTAGTCTAATATTATGTT
ATACCAGGTTATGCATGATGTTAACGATTGAAGTCAGATTTTTACCTAAT
ACAAATTTTGTTAAATTTTTATCAGTTCCCTGGTGCTTCAACATAATTGC
ATGTCAAAAGCAGCAATTGATCAATACACAAGAACAACAGCTTTGGAGCT
TGCACCACACCAAGTCAGATGTAATGCAGTCAATCCTGGAGTCATTGTAA
CACAACTCCATAGAAGAGCTGGAATGTCGGAAGAGGACTACCAGAAGGTT
TGTCGAAATGTGTCGAAAAAAACTTGACACTGTCTTCTCAGAAATTAGTA
TGGATTTTAAGTAAAACAAACTTTTGATGAAGACTTAGTTGCATTAGCTT
ACCTCTGTTGCATAAGTACAGTAATCAAAATTTTTATTTCTTTGACATTA
CAGCATTGACCAAAATCAGTAATTTCAGAATTGGCTTTTACGGAGACTGT
AATATTCAAAACAATAGAACCACCATCGTTATTTTCACGAGGATAAGAAA
ACAAAAATTCAAAACTGCATTACGAGGATAGGGATCAAGTTAATTTTTTT
CATTCTCCATTTTATTGCAGTTTCTAATAAAATGTCAGTCAACACATGCA
TTGGGACGTGCTGGCAATGTTGATGAAGTAGCATCGGTCATTGCATTCCT
GGCTTCAGATAGTGCTTCGTTCGTCACTGGTGCAACCATTCCTGTGGATG
GTGGAAGACATGCTATGTGTCCAAGATGAGGAGCATTTGAAGATTTGTTT
GTACAAAATGAAAAAGTGACATATTTCTTCTTGAGGAAGCTGCAAAGCTT
CCAATTCGAGTACTTTTATTAATTTGTAGGAGGTGGACTGTTTCGACATA
TTTCTTCTTGAGGGAGCTTGAAACTTTTAAGTTCAAGTACTTTATTGATT
TTGTAGAAGTGAATTATGGATGTGACTCAATGGCTCAAGGAACCTAAATT
GGGAGAATTTTTGGAGACGAAATTTTAATGTTTCATATTATTGAAGCTAT
AGTTTTTTATGTAATATGTAGTTTTTTTTTTTAATTTTGATAATTTATTT
AAAGATTTGACATTGGAAAATAAACAATAGAAAAATAAACTAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004727XLOC_004727Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008441-exon-sc0000085-1575043694:97141..97396TCONS_00008441-exon-sc0000085-1575043694:97141..97396Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1575043694:96673..96812TCONS_00008441-exon-sc0000085-1575043694:96673..96812Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1575043694:96354..96446TCONS_00008441-exon-sc0000085-1575043694:96354..96446Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1575043694:91161..91246TCONS_00008441-exon-sc0000085-1575043694:91161..91246Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1575043694:90903..90955TCONS_00008441-exon-sc0000085-1575043694:90903..90955Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1575043694:90756..90796TCONS_00008441-exon-sc0000085-1575043694:90756..90796Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1575043694:90150..90321TCONS_00008441-exon-sc0000085-1575043694:90150..90321Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1575043694:89302..89826TCONS_00008441-exon-sc0000085-1575043694:89302..89826Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1510915933:97141..97396TCONS_00008441-exon-sc0000085-1510915933:97141..97396Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1510915933:96673..96812TCONS_00008441-exon-sc0000085-1510915933:96673..96812Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1510915933:96354..96446TCONS_00008441-exon-sc0000085-1510915933:96354..96446Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1510915933:91161..91246TCONS_00008441-exon-sc0000085-1510915933:91161..91246Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1510915933:90903..90955TCONS_00008441-exon-sc0000085-1510915933:90903..90955Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1510915933:90756..90796TCONS_00008441-exon-sc0000085-1510915933:90756..90796Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1510915933:90150..90321TCONS_00008441-exon-sc0000085-1510915933:90150..90321Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1510915933:89302..89826TCONS_00008441-exon-sc0000085-1510915933:89302..89826Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1491911889:97141..97396TCONS_00008441-exon-sc0000085-1491911889:97141..97396Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1491911889:96673..96812TCONS_00008441-exon-sc0000085-1491911889:96673..96812Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1491911889:96354..96446TCONS_00008441-exon-sc0000085-1491911889:96354..96446Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1491911889:91161..91246TCONS_00008441-exon-sc0000085-1491911889:91161..91246Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1491911889:90903..90955TCONS_00008441-exon-sc0000085-1491911889:90903..90955Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1491911889:90756..90796TCONS_00008441-exon-sc0000085-1491911889:90756..90796Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1491911889:90150..90321TCONS_00008441-exon-sc0000085-1491911889:90150..90321Clytia hemisphaericaexon
TCONS_00008441-exon-sc0000085-1491911889:89302..89826TCONS_00008441-exon-sc0000085-1491911889:89302..89826Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:89302..97396 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.04826	3.77118	1.25658	1.8107	0.948547	1.59275	0.767936	2.32556	0	0	0	0	0.19011	0	0	0	0.460666	0	0	0	1.02291	0.000370012	1.29762	0.997927	3.70497	4.81581	0.527883	0.0127708	1.23159	0.760552
Blast
[Close]
BLAST of TCONS_00008441 vs. Swiss-Prot (Human)
Match: DCXR (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 3.740e-27
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 2 
Query:  692 CMSKAAIDQYTRTTALELAPHQVRCNAVNPGVIVTQLHRRAGMSEEDYQKFLIKCQSTHALGRAGNVDEVASVIAFLASDSASFVTGATIPVDGGRHA 985
            C +K A+D  T+  ALEL PH++R NAVNP V++T +  +A  S+    K ++   +   LG+   V+ V + I FL SD +   TG+T+PV+GG  A
Sbjct:  150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG-QATWSDPHKAKTML---NRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA 243

HSP 2 Score: 66.6254 bits (161), Expect = 3.740e-27
Identity = 44/153 (28.76%), Postives = 71/153 (46.41%), Query Frame = 1 
Query:  217 MSFDLNGKVALITGASSGIGKGTALYFAKNGARLAITGRKEDNLKEVAKECEEVNPNKEKVLTLVGDLSKEEDTERTFKETINHFNQLDILVNSAGIVMNGTAESTPLQDYDLQMNINVRSIFYLTKLAIPHLIRS--KGNIVNVSSVTGLRS 669
            M   L G+  L+TGA  GIG+GT       GAR+    R + +L  + +EC  + P       +  DL   E TER     +     +D+LVN+A + +         + +D    +N+R++  ++++    LI     G IVNVSS    R+
Sbjct:    1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP-------VCVDLGDWEATER----ALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA 142
The following BLAST results are available for this feature:
BLAST of TCONS_00008441 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCXR3.740e-2739.80L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
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