TCONS_00008429 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008429
Unique NameTCONS_00008429
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length702

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008429 ID=TCONS_00008429|Name=TCONS_00008429|organism=Clytia hemisphaerica|type=transcript|length=702bp
AAAAGCAACAACACATCGAATGAAAATTGTCTCATTCAACAACACcaGCT
CGGAAGAACCATGCAGTATTTATCTGGTGGCGTTTTGTTTATTCTCTATT
TGGTTGGTTTTCGCAATCATCGCACTACTTGCACCGCCATTATGTTGTCA
ATGGAAACAAAATGGCCAGCaagaagaagaggaagaaggCTCAACTTGGA
AGAACAATGAACGACTAGTCAAATTTTCTGATTCTTCTTTTGAGCAAAAG
GAAAGAACTTTTTCAACGATAACAAAACAATCAGATGATATGGACACTTC
GCAATTCGAAATTAGTTACaatacttgaaatttttttgtaatatatttgA
TGATAAAtgtcaacttttttaaaaaatctatcTTACTCGATAAAAACCAA
TTCAGAAAATTCAACTCAGAAAATGACATATTCTTGTTGTCTTCTGGTTT
catgattatgacgtcattggcCAAGACGCGATAGTCAGTTATTAGTTACA
ATATTACaatatttttcgcgaaaaaagGTAATAACAATTGGGTTAGACGG
CCTAGATTAAAATTAACAtaatagtacccttcatgttcagtcactttttt
gatcattttctgtATCCTATTCGAAATTATGGTAATTGTCCCTGGAGGGA
TACTAGGTGTGCGAGGTATGACGGGTATGTCAAAGTCAAAAGAGAACCTT
AG
Run BLAST on NCBI

protein sequence of TCONS_00008429-protein

>TCONS_00008429-protein ID=TCONS_00008429-protein|Name=TCONS_00008429-protein|organism=Clytia hemisphaerica|type=polypeptide|length=108bp
KATTHRMKIVSFNNTSSEEPCSIYLVAFCLFSIWLVFAIIALLAPPLCCQ
WKQNGQQEEEEEGSTWKNNERLVKFSDSSFEQKERTFSTITKQSDDMDTS
QFEISYNT
Run BLAST on NCBI

transcript from alignment at sc0000085:591625..610579+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008429 ID=TCONS_00008429|Name=TCONS_00008429|organism=Clytia hemisphaerica|type=transcript|length=18955bp|location=Sequence derived from alignment at sc0000085:591625..610579+ (Clytia hemisphaerica)
AAAAGCAACAACACATCGAATGAAAATTGTCTCATTCAACAACACcagta
agaaaaatattttaacaaatgaGTAAATTTGACTAAAATAACGATTTACT
TTTTGGGAGAAAATCGCTTCTTTCATTCTCTCAAGTACTGTTTACACATG
ATATATCAATATCGACATTAAATATCTACTTTGCTTTTTCACGAATATTT
AACCACACTTTCAATATTTTCTAACGTGCTCTTTTGTTTATCTCTCGAAT
AAGAAGTAACCGATGTTTAAAGTTTTCCCCAAAATTTGTCTTTAGAGCTC
AGATCCCCAAAAATCAAGCAAATCTTTTGACAaaatgtcaaatatttttt
ctcaatagaactttcattttaattcatttgaaaaaattattatgaCAACT
GAAGAAGCCTACAGGGTGTAGAAAATTCCAATTATGATTTTTTCCTCAAG
CTTAACACTCAAACGTAATTAAAACTGCTAGGGTCCGAACTTTTCTGGGC
GTGTTGAGCCTTCTCTTTTCATAAAGCTACTCATCATGACTCATCATGCA
TTCTGATCTTCTTTTCTATTCTTCACAACCAATAAAATCTTGTAGCTACA
AAGTCATCCAGAATCCAGAAAGGATTCAATTTTTCCAGAATCAAACCAAA
TGGAAAAGGATCGAAGTCATCACACTGCGAATAAAAGTATAAGAGATTCT
CTTCATAAATCATAATATTGCTTTCTTTAATTTCGAGCCAAACCAACCGA
AAGAAATCGAGGCGTCATCTATCAAAAACAAATCGTATTTAACTTATCAT
GCTACATTTCGATTGGTTATAATAGCATTAAGGTCAAGAAAATCTTGTAT
GTACTCACAACACAATCTATACCTTGATCTTTAAACCTTCATATTTGTAC
CAAAAACATTCCTAATGCGAACAGGAAAATATATCCGGAGTTTTTCCGGT
AAAAAAGATATTGTACCAGGTAACTATCAGTTAATTCTTCGATGTGAAAT
GACAATTGGTAATTATGTATTAttaggtgaaaaaaaaaaattgaataatt
tctGTCCAACAATTTTCCCAGAAGTCAGAAGATTTGGGTGGTAGAGCTGC
ATATATATAATATTTCGCTTTTATTGGGTTTCATCAGCACTGGTGCGCTA
TTTTAACTCGAGACTTTACCTTATCGGAACTAATCAGATCACCATTAAAC
AAGGAAAAGTTGCAAGAGCATGTCTATTCGATCTTCTTAAATCACTAGAA
AACAACATTTATTGTATCACCCTTGAAATCAACGATTCGAATCTTACAAT
TCATATCCTTAAAAGTAGCAAAACATTTTCCTCGTAATTTTTACTTCAAa
acagatttcgatataaagNtccgaaaaccgacccttagagagaccaaatt
ttagtgaaaaagtgacccttagagagactttttcgaaaaattttctctga
ttttcaaaaatttcctacccttaagCTACGGGGACACGGAAACAATTTTT
ATGCGATcgcaacaaaaacatttttttgttgcaATCGCATANNNNNNNNN
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NNNNTCCGGAAAATCGCAATTGCATCCTTTGGAAAACAACTTTTGTGGCT
TACGAAATAACTTCCGACTACTCCAAATAAAGCTCTAAAGACTCTAAAAT
GGAAACTTTACTTCTGCAGTAAAGCCATCCATGCCTTTACAGCTTTCATT
TCGAAGGTCTAAAGTATCATCTGTAAGCATGGCCGTAAAATACTTTGACC
CAGGCTTTTAGTCCTTACCTAGTAGGAGTTTGAATCGAAAGAAGATATGG
CGTAGCCTTCTTTGACCTATATCTACATAACAATTCAAAACTTATACTTT
GATTATTGAATTTaatgatttaaaaatatttggaaGTTCAATGAACGAGA
TTATACAATGATAGTAATGCTAGTAATTTCTTCCAAGCCTCCCTTAATAC
ATTGCCTTTCTTCAAACTAATCCTCAGCATTCGATACAGTCAAACAATAA
TAAATGCATAAATCTTTTTTGATAGCAACCTTTTTAAAGGTATAAAGCTG
TATTGTCTAATTCTCAGATAAAGATTAAATTGGTCTTAGGTTTATGTATA
AGAGCAATCTTTATGATGGGCGCCCTACTTTTTAACAAAGGTTGGATCAA
TCACaaattcaataaaataccttgtgTCCGGTGGAACATTTTACCCGCTT
TAGAAACGAATTATACAAAGAATTTCCATCTTACTATGATACTAtccggg
gggcactcgattcaaaaacgaccatacgtgcggcccaaaattaggccttt
gaaatcggaccttacagtgcagagaaaactttgcaaaatttgacccttac
ggtgcattttcttgaaaacatttgaccattttcaggcaaaatatggtcag
attttcgagAAAAGTGAAATcttctcatctttgctgatttcgacccttac
agtgcagtttttgaagcttggaaaatataccctttagggccgcacgtatg
gtaggtcatttaccttgagttgCCTCCCCCGGCatactatactatactat
actatttaaaaaaatagtaCGATTTTATCTCATAATACCATAATAAGAAT
AAAGATGGAGCCATTAAAAATAGTGGAAAATCGTGTCGAATTACTCCTAT
TCTTTTGTACCCAAACCTCCGTTGCCAAATAAATTTGCTAGTGTAAATCA
TCTTTAGCTACATAAAGAAATATTACTGTATGCGTATACACCTTTTCCAC
CTTAGCCACCAATTGCCACGCggacattttttgtccgttcTACCACcata
aactcgatccaatccttttttacacctttttctattgtctataggtgtga
aaaaagactgggacggttttagggtggtaaaacacACAAAAAGATGCCCG
CGCGGCAAAGGGCAgctatggtcgaaaaggtgtattgatacAAGGTAACA
TACTTTTCATTCACTTCTCCTTGTTCGTGAAGTAACAtcaaataacatca
aaataaacTCCCTGCTTCCTCATAAACATTGCTTGAACACACACACAAAC
AAAATTGAGCTGCACAAGGACTTTACTAAGATAACACAAATAAACGCTGT
TatatcaagattttttaaattcttcaaaTATAGAAACGTAAATTGCTCTG
CAATTTAACTTGCAATTCACTTATCAAGGATACCAATTTGATCTAATATC
AAAAcgacgttagatgaacgttgaaacattAGGAACTCTTTGGACTTGGG
GATAACCCATTTCTCGAGGTTCTAGCTCTGACAAGTTCACTGATTCTTAC
TCGAGTTCAACTttgatacacccccttctcgcagacccggtagaaatttt
tcagtcagtggggatagaaataacGAACTGATACTCgattgggattgata
ttcccttATTCTTTTAGGCTGGGGATttcgattcttttgttttcaagtca
gaaagttCAATGGGGATTGAAGAAATTACACAGTATTTTGCAGTGATGAT
TTAAGTTTATTTAATTATATTCAATGGGGACAAAAGTTAGATGATAGTTT
TCCACCGGAACGATATTCTGGCCAATTTtgccagtgggaaggggtcccag
tgggtctgtgagaagggggtgttttgaTCATTAAATCACATCAACTTTTA
CACCATGAGCTCTAAACAAGTCTTAACGGTGTTCCAGCTATGCTATCAGC
TGTAATGTAACATTTTGCACTAACAGTGTTTTGCCGTGCAATAAAATGAC
AACTTGTCGGATTCAGTTAGACAACATTGATATTCAAGAATGTTGCTGAG
AATGGAAGAACGAAATGATCCAGGAAATGAAAGCAATCAAAATGAAATGT
CAAACATTTATGCAATGTAAATTATTATAatcatcaaataaaaatggtat
ACTGATAACGGATGAGAGGCTCGATATCTTTATAATAAACGCGGTAGAAG
GAATGTAATCTATGTTGTacaaagtgctctataccatTTCATGGCAAAAA
TCCCTCGGTCAAGCGGATCTCGGGTCAATTTTCTACTGATGAAATTGCAC
AACGTACATTTTTCTACGTCACTTTGCAAAAACGAATTCGTTCATTTTCA
CATTTAAccagaaatcaacaaaaataaaatccttGATCTATCTTTTAAAC
TGAAAAGCCCATCACGAGTCTCTTTCTTAAAGATCGAATGTTCATTAAAT
CCAATCAACTACATCTAATCCGTTGCTAACGCAACAAACAGCTTAGCAAC
AACGTTTTATAAGTACCAGATCAACTCATTAAATGGAAAATGTTAATTAA
TGATAAAATGCTCATCAAAACTTCGCATAACTCTCTTCCCATGGTTAAGC
AATTTCGTATTATTTTGAGGTTACCAAAATCATATGGTGTCTCTGCTTTT
GTAATTGTCGACAATAATTTACGTCAAATAGCTTGGATATTTTAAAGGAG
GACAAAGGACAAGTTGATTTTCATTTGAAGCAAGGGTTACGCCTAATACA
TGAATTCAGTCATTAAATGAGTAACCAATCCCAAATCTATTTCACTATTG
ATTGCAAAAGATAACTAAGCGATAATCAACACATCTCTCATATAACCATG
GCTGACTCACACAACTTTAAACACTTTTATTGTTGCAGCTTAATGACTGA
TCAATATATAAAAACCTACATAATTCATTCAGATACACCCTGCGAAATAT
CACCGAATCTTGTCTGTGTAACACAACTTCCTATCATTCGATTCTCCCAT
AATTATTCCAACGCCAACATTATTTCTCAAGCAAGATTTTTTATCAAAGA
TACAGGGATGTCAAGTGTGATCAGATTCGCCTAAGTATcatcccagctgg
tacacaacgttgtttcaacgttcatctaacgttatatgatgttgtgaacg
ttagataaacgttgaaacaacgttgtgtgccaggtCCCCTGCCAGCTGGG
ATAAACCAAAAATTTGGTTTTGACAAAACAATCTCAATAGTGATTCTCCA
TAAAAATCATGTACAAACCACTAAAAGATGACCAAATATTATTTACTTTA
AAACATTGATGTATCGTCACTCTTCAGAGTACAAAGTACATATTaatcca
aaaatcaacaattttcaCAACAATACTTTTGTCTTCTCTCTATAAAAACA
ACACGTTTGGTTATCATTGTAAAGATGATAATTTATTTCACCTTTCCCGT
AAGCTTTCTCCGGAAAAACAAACGAGATTGCGTGAATAATATTCGGAAGA
TTTTTCTGCAGACTTGCTAAAGTAAATACAGTTGAAATTGTATGCAAAGT
TCATTTGTATAATCTTATTATTTTTCCTCGCTCTTGCTTTGAAGCAACAA
GCTTCCAAATGTGTTTTCAGATGTCTATACTTTCTATATGTGCAATTTTT
CTTATTCTAATTTTTCATAAGTTTTAACATTTTAcattcaaaaatcacaa
caaTGAGATTGTAAAAGAAAAATCACTTTATCGTCTAAATGATAGACAGT
AGTGAAAGCATATGGGAAACTTCACGTAGAAAAAACTGAGGAATAAAATA
CCTGAATTCTTAGCCATCTTCGTTGAAACTTTTACCTAATGAATAACGCA
AAATACTTTCAATTCTCATTTTACGTCATgctaaatttttgaagccttag
aatgttcttaactttttgagttttaagcctaaaaatgatcttaacatgtt
ttaatttcaccattgtgtgaatatttttgattacCTAAATTAATTGGGTG
TTTTcgagacttaaaacttaaaatgttcttttatatagtttgttcttata
aaaaaaacgtacaCTATTTCCTTCTCATAGTATTGAACAGAAATCGAATt
acaaaattgaatttttttctcaagagcAACATCCTTCCCATACTTAGCTT
AAAGAATCTTAATTTGTTAACAGTATTAACGAACTAAATACTATCATACG
GGAAGACCTCTTTATGTCGGCCTCTTCACTTTCTGTTGAGAATTCAACAA
CCTAGGGGTACGATGTTTGATCAAGCTTTTTCAGTTGCAGTAGAAActag
aaacatcaaaataaggtttacagcctggatatccaggctagccAAATACA
GACTTCGAGTCTGAAAAATTCATTGTCCACGAACTTTCTTCTTTCTCTAC
AAtttatgctttttttataaaagcatacaatttgaagcctttggatgttc
ttaacttcttgagcccaaaaatgttcttattttcgccattttttgagaat
ttttgtcaatttctttattaaattcggtgttctagagtccgcaaagcctt
aaaatgtttttaacttgttcttaacattttggccatcgaagccttatgtt
ctttatAGTTTATATAGTTATagttatatagtttgttcttataaaaaacg
tatattcCACTGCACGTTATTTTACAACCCTGTGGGTTTATCAGGTTTTC
TCCTCAGCATGTTATCATTTAGCTCCAGTTTTGTTTCTCATTGAAAATAC
TGTGTGGAAAGatttatacacccccttctcacagacccactgagaccCCT
TCCCAGTGGGAAAATTGGTAAAGATATCGTCCACAGTGGAAAATCATatc
ctaatttttgtccccgctgaaaataaccaGATAAGTGAATACTCACTGCT
AAATATTGTGGTATTTTGTCCCTCCCCACTGTGTTTTCTGGCTAGAAAAT
AATGGAATCCAagtccccagccataaaaaaacatgggaaaatcaatcccc
atcgagtatTGGTCCGTTATTCTTACCTacactggctgataaaatcctac
cggctctgtgagaagggggtgttacaGGGGTGTAGTAAATTTACGCCTCT
CAAGTTATCGTAAGCGTTTCGCTGCAACCCCACTCCTACTCAGTCAAGTC
ACGTGGTTACTATTATATATATGTATTACTATATCTAGGTTCACGTGAGT
TTCAAGTTtctgaatacacgttttttctataagaacaaactatataagaa
cataaggcttcgaggcccaaaaatttaagaacattctaagaacatacaaa
ggctttggagacttaaaaacatgcaatttcttaagaaattacatcaaaat
gctcaaaaaatgctgaaaataagaacattttaagaacatttttaggcatt
ttttgacgttcttataaaaaaaaaacgtgtacataaaTTCAccaaaaagt
agaaatttcATTGATTGGAAATCTTAATCCTTACTAATATCAGTCaaaaa
agaaggaaagaaaaaaatcatcaaaaatatcGTTGATGTGCTAAAAAGGT
ttcttgaccttttccttaactTTATCAAGAGCTTGTGTTTACAAATCAAT
CATTACCTTTATAACATTGACTGTGTTGTGATGAAAATTTTTCTGtagag
aaaaaatgtaaaaataaagacAGTGTCCAGAATTCATAGAATCTTGATTT
AACTCTCTCCAGAATCGATAAGTTGTGCAAATGGCTGTGTGTATCAGATT
AACTTTAGCACTAGGGACGAATTCTTCTTCCAACCCATAATGTTGACCTA
GAGTTGAGGCACCAACAACTTTTGAATCACGTCTTATTTGTTATTATAAA
GCATTCCAAGTCCATTCTTTCTCCTTCAAAAACGTTTATATACTAACACT
TGGAAACTCCAGCAAGGTAATCAATTAAAATATCAATGGAATTATTGGCT
TTGACGGAGGGCACTTATAACCCTTAAAAAGTAATGTTGttttatcataa
tttgaatattttctcactaaagttacaaaaatgacaaaagaagcTTAAAA
GCAAGATGTTATGTCTAAATTTCTGAGTCAGACGCCACATATAGAAGCAA
GAAAGATTTAATGTCAAGAAGAAAATAGTTTTGTATCTTAAAGAGTATTA
TTTGGATTCGTTAACTTTTAAATAGTCTTCAAGAGACTTTTCCACTAAGT
CAAATGACCTATCCCTAATATTTTTGAAGAGCAAAAAGAGAAAGATGCTA
GTAGTTTTTGATTGCATTGCTTTCTCATTCTTTTCTTTACTCTTTATTGT
GAACCATCATTTGACTTTatcgaaaaatgaaatgaagatcaaaataaaat
taaatttcaaaatgattaTTCAGACAATGAAttaaaaatattgtttcaaa
TATCATACTGTAGGGCCTTATAAAACCGTTTTTATTCAGGAGGGTACATT
GCAATGATGAGAAAGATAAAATCACTTCAAGATTAACATAGATTTAATGC
TGATCAAAATCTCTTCTCAACTACtacatcaacaacaacaaaactaaAAC
AACAAGTCCATGAAAAGCACAACCTTTGAAAGATCACAAAAACGTGTCCC
CTATGAGGAAAAATGTCTGTTCTTTACTACAGTACTACGTATAATCAGAA
TTTGTCCTTTGATTCTGTTCTTTTTAAACCAGCACAGTCCTTCATTAAAA
GTAACAACAACGAATATTGAAAAATGAATAATAGTAGACATGAATTAGCA
CAATTTCTCAGATATACATTAATGTTTCAATTGAGAGATATTGATGTTCA
AATGCTTCCAAAAGCGAATACACAACAaaacttcttcaaaaaaaacaact
caaaCTTTCCACTAATGAAGTAATTACCATTGTGAAAAATGTGTTTCAtt
aaaaacgttgaaaaaacaatCAGTGATGTATTTGACAGTCATTATTAAAG
CAAATTACTCTAGTAATTAGTGTTGACAAAAATACGCATCGTAGTTTGAT
GTTTTGAAGGTTTTTCTGATAAACAGAAATATTGTCACTTGTAGTACCTG
GGTCATAATCATACGCAATCAATCGATCATATGTTTTATAAATAAAGTCC
TGATCACCAAAAAGTAGAGTGTTCTAGGCAAGAAACCAATTCATAATGCA
TATAATCTCATGATCATACTATCTATATCTAATGGTACCTGTACTTTCCT
TTACCTAAATACCGAATCATAAAGGCAACTCGATACATTACTATAATCTT
TGGTAGTACGGCTTATTTCCGTCGACTACTACCCCATCTGTTGTAAACAT
TCACTACTACTACACTGACCATCCAAACCCTTTTTTAAAGCTTCCTGTAT
ATTAATTATATTGGTAGTATACAATATATcctcttttttaaacttttttt
gttgaCGATCAAAACACTGCATTATCTTACTTGTAAATCCATGTTGTCTt
tacaatttttcttgttttgaaataagAAATCTAACACTTTATTAATACAT
TTCCCATATTTTTTCACGACAAGCACAAACAACCCCTACAACTTCGCTCG
TATTCCAATTGTGATTTAAACTACGAGATTGTGCGTTCAAATAGGCTCGT
CGTAAAAGTGAGTTTACCAATAAATGATGCAGTGACTCCAGAAGTAAAAC
CCTTCACCATTTTTTCTAACCCTTTTCTACTGAAATTGCGTTTCTGAGTA
GACTATAATATGCTCACAAGGGATGTCCATTCTAGAAAAATACAAATGCA
AATCTAAAGCCATAGAAACCCTATATTTTTAGCATCAACCCAAACTACCA
TTTTAATGTAATATGTTCCATACTATGTTCTTAGTAAACAGTCACCATAT
AATCCGTCATTCTAATGTAGTCTATACATCTTCTCTCTCCTTTTTTATCA
ACTCCTTCTCTTTCTCAGTATTTGACAATCGAATGGCAGAGAGCGTGAGA
GAGCGAACGAGAGAAGAGAGAGTGATTTTCAATACAAGAGACATTATTAT
GATATCAGCTTCACATCTCTTCTATATTCGCCCTGTCACCAACGtattaa
aaaatgtaaagaCATGATTGTCTATGTAACTCTTATTGTCTCAAAACTTT
TGACAATATTTACAAATATGGCGCGCTATAAAGTTTATATCACTGCGGTT
TTGAGTACTTGTAAAGCATTACGTAGTAACGTTTATAATTACGTAATTGA
TGGCTCCGTGATGTTCGTAACGATTTTGTATCTTCATTTCGCCATCTCTT
tttttaaacacccctgtctcaatgaccCGGTGAATTTTTGAACCACCGGT
GTAACTatgaaaaaaaaggaatttcaccgggtttgaaaaaattttcattt
caaagcaTTGGTGATTCTgatcattgatttcaaagccccggaagggctag
atccgaaactcctggatgggaaatgaagccacttatttgcCATCCTGAAC
ACATGATCCGTGTgtctttcaaacaaaatttctaaatgcaAGGTAAACTT
TATGGcttcacttatttttgcttgaaaaaggttgaagattcctctctaac
CCCTTTGGGGCATTCCCTCAATGATTATTATGGTTTCCACTAATATGCCT
TTTTTAATTAATGTGATTTTGAACCGGGATAAGACAATAAATTTCCAGAT
CTTGGCCGGGATAGAGAATTTAAAATTAACTTTCAACACTCATTTATCCA
ATCACATCATTATTACAGTTCGTTAAATTCCCAAGAACTTTTGGCAAGAA
CTCAAATTGTTTTGGTCCCTACATGCTGAATGAGGCATAAATTAGAGATC
GGTAAGGGCTTcccctggtaaaaattcttgaaaagttcttgaaaagatct
tatcaagaaactttgcttattctttttcagtttcttactacGAACGTGCc
aagatctttcaagatctttaacGATTTGATAAGACTCTTTTATAAGTTTT
GAATAGGATTCTTGTCCCTTACAGTGATTCAAGATCTTGACGGAATCtta
agtaaaagtaagtcggAGGTTACCCGAAGGCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGTCGGAGGttacccgaaggctcctctttcgatagc
tatctacctgaaggtaggggagggattgctccacttacccttaatccttc
tcttaattgctgagcatcagacagagaggcatcaagtaccattttggaaa
tccttggtatgacccggctgggggttgaaacccacaaccttgtgcaccgt
agacggatgctctaccactgcactacggtcgctgacGAAATCTTACTACT
ATCCCCGTTCAGTTATTGAATAAGGGCCGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAAGAATCTTGA
CAATTCTTAGCGATTTCTTtacaagatctttaaagatctttttgctggaa
gaaattttcaagattgccTAAGAATCGTTGTAAGATCTTAAACGATCTTt
tcagatcttatcaagaatttttaccagggtCGCTTAATTAATGGTAAATG
ACACTTTCTACATTGTCTTGGATTTGTACAGCACAAAATGTCTCTGGTCC
CACCTGTGCTTGTTCATTTAGGTTTTAAGTTTTACTAACTTGCttgtcaa
aagtcaaaaacgcTGACCGTCGTCCTCAGCAATCAGGATCTAGCAAATAA
AAAGCTAACCTTCTTCGTCTCAAATAAACACAACTTTATAAACTCGCTGg
tggtgagacaggggtgtctttcTTCATTGAGTGAGGTTGGCTTTTtttcg
ggacaagctggagtttttacaagctctcgtttgatttggttggtcgttaa
cctgtaataaaacaattttgttaccttttctaaagaacgcgtcatctcta
ttacttcaaataaccaattagtgaagtctcttgtaaaaactccagcccat
CCCTTTTTTTCAGCATAATCATGATATAAACGTCAAGTACGAGGCAGgcg
atgttcgtgacgtaatttaagAAAAGGTCTTATAGAAAGCGTCTGTTTAA
ATCGAATACTGATATTCCTAtagaaaaaagatatatttCACAATTTACAC
GCAATAATTCCCTAAAGAGTTATCAAAAGGTAGCAGgcaataaaaaatat
catcacTGCACTTTAATTGATCTTTGtgagtttgaatgataaaaatTCAT
TAAAGTGTAAAATGCTGCTATAGATCGGCAATAAATTTTCTTGTCATCTT
TGCTTGTTTGTATCTCTTTTTGAAATGCTACAAGCTTCTGCATTTTTGTA
GAATTTTGAATGAAGTTCATTTCTGTTGTCTTTTGAAATGGAATTGGTTG
GAAAGCAAGAAGGTTGGTAAAGACTAGACGCTGATTTCTAAAAGCACTGC
TATTTTTATCCTTCATAAACCGAGACCTATATATTTTATGATTAGATATT
TTCTGGTCTAAAATTAGTAAAATGCGAGAAGATATATAGTTGGTATTTCT
ATTAAATAATAGTCTCTGCTGAgatttttcgatgtttttaatTGGGAAAA
ATATTATCCTTTTTTTTCTCCGACCGGCTGTCTTATACCTAATCTGGCCA
ACAAAACTTGTTGTTGACTTATGCGCTGGGAGGGGGCACAAGTGATCTAA
GGTCCCTTAGGTTAAAACATTTCTCAGAATTTAATctctacagtatgtgg
cccccaaaacggcgatcaaatttgaaatttctctcaaatctagaggaaaa
gagattttacaaaaatttttgctgcatgaaaacctttaacatctctactt
tatttctttagttctttttcaaaattttcaatttcaacaatatttttcaa
tcgctttaTAAAGATAGGTAGCTTTTTTCTAGTGGCCCCCAAAACGGAGG
TTTGAAATTTTagcgatttctcgagatatctttaagatatgaatacaaaa
ttttgaccatagttttgaaatatgatttagaggggtttgggcataaattt
atttgataaaatttttacagtatacccctggttgtcaaaatgcaggtgcg
gggcccccaaaacggaggtgtagttaaaatcaaactattaagcccagtgg
taataggggggaaaactatgaacatattacACGTGTTtgcccttaaattt
acgacccgatggatgtaaaatttaggatttttatgaaatatttgaagatt
ttcgatatttcaaagtccaaactgaaaatttagaaattttcaaaatgata
attttgatttaacaacgtcttaatcaagtttttgaaaaaaatcccttttg
aaaatagttccattcatgtatggaataagctgtgaaaattttagaaaaaa
agcttaactgaaactgaaaatattaagctttaaagatattttNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNtttttgttataaactattaactcaaggtgatagga
atagaatcccaaaattttttgctttttctcatatttagaattttcggttt
tgtcaatgctgattctagggctccaaaatactggttgaccttcaagatgc
tatatcttttacccagcctctaaagtcacagatgtatttgcactttctga
acggcattaggtgtagaaagtttcctttaccccgttttcataacttattt
ttaatATCCAAGgtgctagagtgagttatatgcaatttttatctaatttt
ggtgttaaaatatttcctttagacgcaaatatgttattttgaatctgtct
caaaccagcaaaaacatgctcatttttaagtataaccatcattctttcaa
aataaacaaaaatcgattaattctgataaatctacaagtcagaatcttca
ttttaatgaaaacctccgttttgggggccgtctccgttttgggggccata
tactgtatgcTTATGTGAAAATTGCGATTTTagtacagtaaaacctctaa
ttaacggacactctaaaaggcggacacctctgattagcggacaatttcat
tttccccggccgtttcctagtcaaatcctcataaaaaagtttctaaaagg
cggacactcaattagcggaccctccgattagcggacaaattttttcgcac
gaaattgccaaaacccctattttagctctccaattagcggacattgaata
tcaaacggatcacagacgtccaaaatcgaaaaaaaaatttttagatattt
ttatttcaagcacttaataattttttttttcttattattcaaattatttc
tacaaatttctaGTTTTCCTTTGAACCATTCAACGAACTTAGGTGGGCCA
AAGaatcataaatcactggtacATCAAGTCCGTACCCACCACCTCGATTT
AACCTCTTGCCACTCACTCGAGCTCTgttttaataacctttctctNTCAA
GTCCGTACCCACCACCTCGATTTAACCTCTTGCCACTCACTCGAGCTCTg
ttttaataacctttctcttgttcttctatggcctagtgtctgcagataag
tactttagaccccaattttgtatttttgactccctgggatggcctaattt
caaaattggagctccgagatcaaaagtttctaaaaggcagacacttctaa
ttagcggacactaacacctttccccgatggtgtccgctaatagCACACCG
tggtgaatctaaaaatagacatcacTTTCTTTATTTGCCCGAGTTTCAAT
CACATCGTTCATNatctaaaaatagacatcacTTTCTTTATTTGCCCGAG
TTTCAATCCCATCGTTCATTGCGTTAATTTCTTGTGCACATTAATTACAC
TTATAACAAAGAAAATGTAACAACTCTCAcgattttgaaatcaaagtgaa
AGGGATTATGGGATTGAATGTCggacaaatttgaaaagtaataattatga
cgtttgcataacggAGCGctattagaggttccactgtactTCCATGGTAC
TTTCCACAttatttcattggatatttcgattttggagttATTATTTATTG
ATTATTAGAAGCATTTTGAGTTTTGGATCCTGAAGTCTCGTGTTAAACCT
TAGAATTAAAACTCCACACGTTCCAGGATTAACTCAGAGCATTTAAATAT
CATTTGCGGTGTTTAATATTTTGCAGGggatcactttttttatcaaatat
NAGAgcatttaaaaatcatttgcggtgtttaaaaattttgcaggCGGAAT
CACTTTATTTATCAAAACCATGCCTTTGATTGTAGTCGTGTGCATTTGCT
GCCGGTTTAATTTTAAGAAATGTCAAAAGATGGTTGGTTAATGTAAAACG
GGGCCAATTATCTTCCCTGAGTATCAAAGGCCAGTGatcagagaaaatat
tttgaccagGCTGTGATACTCACAGTACGATAGTATCAAGGTCAGCCAGT
CTCAAAACACTAGGACTGCGATTTAGAATTGGGCTGGGCCCTTAGGCAAC
CCAATtggtaaaaatgttttttaaaactttttgtaaTCTTTTCATAACAT
CGACCTTCTGCATAgtaagtaagtagtaagtaatTCGTCTGGTGGCTATC
AGCGGAGCCGGGAGTgggggagtctatccccttttttATTTGCGCTATAC
TTGGGAGGTCAAATgttgaggtggagcgccactcCTACTCTCAGATCCCC
GTGACTTACCGCTTAGGTCAGATTACCCAACATTCATTGGATTGTAAGGC
AAAtactctaccgactgagctacacGGCCACAATCTGCATATCTAATGCC
AATCAAAGCATTCCCTATTGAAACTTCTAGCGTATAATCGCAACCTCTTT
TTGCTAATTTCCAGGCTCGGAAGAACCATGCAGTATTTATCTGGTGGCGT
TTTGTTTATTCTCTATTTGGTTGGTTTTCGCAATCATCGCACTACTTGCA
CCGCCATTATGTTGTCAATGGAAACAAAATGGCCAGCaagaagaagagga
agaagGTACCAATCACTATTTTTCAGTGTATCAATTTTTTATCCGTAGAA
TAAAGTTAGAATTTGCATTTTGGACAGCTCGCCGTCAAGTAAGACTATAA
ACATCAAGGCTCTATCaaatggctgaaatttttaACTGAAGACTTAAGAC
GGCAGCCTTAAAAGTAGTTGTAAAAGATACCTCTAtttttacaatataat
tttcaatgataaaaaaaagcctaaaattttctaattttcaggCTCAACTT
GGAAGAACAATGAACGACTAGTCAAATTTTCTGATTCTTCTTTTGAGCAA
AAGGAAAGAACTTTTTCAACGATAACAAAACAATCAGATGATATGGACAC
TTCGCAATTCGAAATTAGTTACaatacttgaaatttttttgtaatatatt
tgATGATAAAtgtcaacttttttaaaaaatctatcTTACTCGATAAAAAC
CAATTCAGAAAATTCAACTCAGAAAATGACATATTCTTGTTGTCTTCTGG
TTTcatgattatgacgtcattggcCAAGACGCGATAGTCAGTTATTAGTT
ACAATATTACaatatttttcgcgaaaaaagGTAATAACAATTGGGTTAGA
CGGCCTAGATTAAAATTAACAtaatagtacccttcatgttcagtcacttt
tttgatcattttctgtATCCTATTCGAAATTATGGTAATTGTCCCTGGAG
GGATACTAGGTGTGCGAGGTATGACGGGTATGTCAAAGTCAAAAGAGAAC
CTTAG

Coding sequence (CDS) from alignment at sc0000085:591625..610579+

>TCONS_00008429 ID=TCONS_00008429|Name=TCONS_00008429|organism=Clytia hemisphaerica|type=CDS|length=981bp|location=Sequence derived from alignment at sc0000085:591625..610579+ (Clytia hemisphaerica)
AAAGCAACAACACATCGAATGAAAATTGTCTCATTCAACAACACcaGCTC
GGAAGAACCATGCAGTATTTATCTGGTGGCGTTTTGTTTATTCTCTATTT
GGTTGGTTTTCGCAATCATCGCACTACTTGCACCGCCATTATGTTGTCAA
TGGAAACAAAATGGCCAGCaagaagaagaggaagaaggCTCAACTTGGAA
GAACAATGAACGACTAGTCAAATTTTCTGATTCTTCTTTTGAGCAAAAGG
AAAGAACTTTTTCAACGATAACAAAACAATCAGATGATATGGACACTTCG
CAATTCGAAATTAGTTACaatacttgaAAAGCAACAACACATCGAATGAA
AATTGTCTCATTCAACAACACcaGCTCGGAAGAACCATGCAGTATTTATC
TGGTGGCGTTTTGTTTATTCTCTATTTGGTTGGTTTTCGCAATCATCGCA
CTACTTGCACCGCCATTATGTTGTCAATGGAAACAAAATGGCCAGCaaga
agaagaggaagaaggCTCAACTTGGAAGAACAATGAACGACTAGTCAAAT
TTTCTGATTCTTCTTTTGAGCAAAAGGAAAGAACTTTTTCAACGATAACA
AAACAATCAGATGATATGGACACTTCGCAATTCGAAATTAGTTACaatac
ttgaAAAGCAACAACACATCGAATGAAAATTGTCTCATTCAACAACACca
GCTCGGAAGAACCATGCAGTATTTATCTGGTGGCGTTTTGTTTATTCTCT
ATTTGGTTGGTTTTCGCAATCATCGCACTACTTGCACCGCCATTATGTTG
TCAATGGAAACAAAATGGCCAGCaagaagaagaggaagaaggCTCAACTT
GGAAGAACAATGAACGACTAGTCAAATTTTCTGATTCTTCTTTTGAGCAA
AAGGAAAGAACTTTTTCAACGATAACAAAACAATCAGATGATATGGACAC
TTCGCAATTCGAAATTAGTTACaatacttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004721XLOC_004721Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008429-proteinTCONS_00008429-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008429-exon-sc0000085-1491911889:591625..591671TCONS_00008429-exon-sc0000085-1491911889:591625..591671Clytia hemisphaericaexon
TCONS_00008429-exon-sc0000085-1510915933:591625..591671TCONS_00008429-exon-sc0000085-1510915933:591625..591671Clytia hemisphaericaexon
TCONS_00008429-exon-sc0000085-1575043694:591625..591671TCONS_00008429-exon-sc0000085-1575043694:591625..591671Clytia hemisphaericaexon
TCONS_00008429-exon-sc0000085-1491911889:609689..609829TCONS_00008429-exon-sc0000085-1491911889:609689..609829Clytia hemisphaericaexon
TCONS_00008429-exon-sc0000085-1510915933:609689..609829TCONS_00008429-exon-sc0000085-1510915933:609689..609829Clytia hemisphaericaexon
TCONS_00008429-exon-sc0000085-1575043694:609689..609829TCONS_00008429-exon-sc0000085-1575043694:609689..609829Clytia hemisphaericaexon
TCONS_00008429-exon-sc0000085-1491911889:610066..610579TCONS_00008429-exon-sc0000085-1491911889:610066..610579Clytia hemisphaericaexon
TCONS_00008429-exon-sc0000085-1510915933:610066..610579TCONS_00008429-exon-sc0000085-1510915933:610066..610579Clytia hemisphaericaexon
TCONS_00008429-exon-sc0000085-1575043694:610066..610579TCONS_00008429-exon-sc0000085-1575043694:610066..610579Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:591625..610579 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.186322	0	0.0678815	0	0.0837075	0	0.127863	0.0852883	0	0	0	0.028882	0.387986	0.247559	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008429 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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