TCONS_00008423 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008423
Unique NameTCONS_00008423
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length977

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008423 ID=TCONS_00008423|Name=TCONS_00008423|organism=Clytia hemisphaerica|type=transcript|length=977bp
GAAATAATCAAGATGGCGGCGAGGAAATCTGGTTTCGTTTGACGAAATTT
GtacaataaagaaaaaaatcaaaaaaaatcatggCTAATGTTGTTGCTGA
AATGGAAAAGGCTGCGGCTATCTTGATGGCACACCCTGGTTTGGTGACTT
CTGAGGAAAGACAACATGCTGAACAGCTCTTTTTGGAGTTTCGTAAAACA
AAGCAGCCTTATGAAATCTGTCAAAGTATACTCAaaTCATGCACTGTAGA
ATATGTTATATTTGAGGCTGCAACAACTCTAAAAGAGGCGGTGATTAGAG
AATGGTCTCTTTTAGAGAAATCAGAAGTCGAGCAATTATGCGGCTTCTTG
CTGCAAACTGTCACCGAGAAAGTAGAGTTTCCAAACTTTGTTAGAGAACA
GATATTGTTAGCAGTTGCTGTAATCTTCAAACTTGGAACATTGGAATCTC
CAGATGCTAGAACTAATTTGATTAATGGGTTGAATGAGTTGTTGACTAGT
GGTAACAAAAACATGGAGCTGATATGCTGTTCAATTATGAAAGCATTACT
TACTGAATATTCAACCACAAGTCAATCTACCAACTTTGGCATGAGTTTGG
ATTTCCATGCAAAGTGTAAAAAGACGTTTGAgGAAAAGGATCTGTTGAAT
CTCTTCATTTTGACGATCAACGCTCTTCAAAAATACACATCTGCTCCTAT
CTCTTCACTTGGACGTGAAGATATTGCAATATTAAATCGCTACCTGTCTT
TAGCTGAACAAATATTCCTCTGGGAATTCATGAGCGGAAATCCTTTATTG
CTGCTTCGTTTTCCTCATTTGAATGAGACCGCTTCCAAATTGANTACCTT
AACTCCTGTGCACCTTTATTGCTGCTTCGTTTTCCTCATTTGAACGAGAC
CGCTTCCAAATTGATTTTCAAACCTCACAAGAATTGGAAAGAAATGATGT
TGAACCCAAACTTGATCGATATGTTCT
Run BLAST on NCBI

transcript from alignment at sc0000085:551133..562108+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008423 ID=TCONS_00008423|Name=TCONS_00008423|organism=Clytia hemisphaerica|type=transcript|length=10976bp|location=Sequence derived from alignment at sc0000085:551133..562108+ (Clytia hemisphaerica)
GAAATAATCAAGATGGCGGCGAGGAAATCTGGTTTCGTTTGACGAAATTT
GGTAaggaaagatttgttttttaccGGCTAGCACAGGACTTGACAAAGAT
CACTATAGTCAGTTATAGGGTGAACCTTTTCTGTTTATATCAGATTATGA
AAATACAGACTGGGTCTCTGTCTACGTCTAGTTAGTTTACACTAGCTAGA
GACGAAAAAGAGAGGGAGGTGCATGCACAGcttcaggctagctctaaagt
aaagctctaaaacagcatctaatagataacatgaaaaccagaatatgatt
cttcaatgggaatcaacaCTATAATTAAGTGCACTCACAAACATCAATAT
ATCAGATCTaataaaattaataacggcactgtcagtcaggcacatcctgg
caaatgaacggggtgagcatttacatggggtattcgtcacccagtgtaaa
tgagataggacgtctcagactaaaagcgtgaaaattaataaaaatgaact
tcaaactgaaaaagggaaaaaaggaagaaaactgggaactttattttttc
attaaaagtttcttcaatcttcgaagacaaaattaacccatggaaaaaaa
aattcatacatgcagttctttgaaatgaagcaaaatatttcaaacccggT
GTAATTAAACTGGgtagagtaccctgcccagttggcgaccgaaatttttg
gattcaaatttttcacttacttttaacttttttgaaaatccttttcaact
aacggttagacaacttttaacatgttcttcgtgtttgttttgatttttta
tttgaggcgatcttcttagaataaaaaactttcgaagcgagcggtactag
tgcccagttcccgaccgacgtaccagtctgcgaccgatcgttaaaaagag
aaaatcagtgctctacttgcaggtaaggtcatattaattgatcaggatga
taaaaaaactcataagctttcccgtattaaatttatttatactcattctt
ttgttttaaaatagctcacttacatttcccttcggcatgttttttcagaa
tttttcttcaagtcgccatttttttctaaggtttgtttttgttttgtttt
gaaagtggcggtctatggagagtcttcatttgataaaaacgcgggaattt
tttatgcctgtttttttctcttcgcttctggaatgttttgatcgcaatgt
agagtcttctttttcattttttgagtttggtcggttgcagactggacgtc
aaatttcgaagctgattgcatcaacttttttatcaatatttcacacGAAG
GAAACTGTATCcagctgatttttacagaaatgctttctaacatactcatt
gttttggacaagtatttttttgGCGTGGGAGTTGAAGGGTTTTTTCTTAC
ggagcttttttgtccacaggtagccattttttattttttttgaaaaatcc
ggctttttcgtgtgcttccgtgcaaagttgaatctttcggattctactcg
tttttttctaaaaccttttttacacagtacgggaaataggtcaaggcaga
ttactaccaaaagaaattctccagaggtttgtttttgtatgacttttctg
ggttcaaagacgtttgatcgccaactagaccggtcgccaactgggcaggg
gactctattcggcgctattacgtcactttcgttttcgaccccgttcattt
gccaatggtcgcaagtgaaaaataccccgttcatttgccaatggtcgcaa
gtgaaaaataccccgttcatttgccaggatgtgcctgactgactgtcatc
attgacaataaaaatcaataaaacaaaggattttctgtcaagactggcca
agagtcttgtaaacattccaacaactccatcaaaatgatctgtcaaagct
ttgtctaccattTTTAACACGGGCTGAGGATTGAGTTGAGAACGCTTGCA
GAACACCCGCGCAggagcaaaaaaattaatttgtcaatcattttctcaag
caagagtacgcgaagcgattctagcttctttacgatagtgccgtggATCA
TCAGcaatcagtggatagtatttaattatcattatccctttattttcatt
cctagaacttttgcaaaaaaaaggaaaaatagaaaagttgtattttttac
tgctctactcacatactgaatttgaaagatctttatTATGTCGacacgat
gtcaatcgaacaaatcgaacgccgaatcaattgaacgcaattgaacacaa
tcgaataattgcaattcaattgtcgaacgcaatcgaatcacaatcgaata
ttacccaggatttgccgttcgattgtttcaattacgttcgattgtattcg
attgcgttcgattgtattcgattaccgtaagttggtctaatctcgacata
cgtcttccAATCTcaacaccggatctgtaaaataatcaaaacaaaccttg
aatgaaattcttggtatcattcttatcgaacaagttcatccatcaaacta
gaagttcagtaaacattgcaatcctttcaattaaaaaaacagccaaatta
taagcagttttacacaacacaagaaacgcatgcaaacttcctcgtaatgt
gtccatcattaaaattttacaactttatcaagtcacgtgataaaaataat
tcgcgcgcttagtcgacctggtttctatttccttattatttattgcaagc
acacgctctaggcAGTGTTTGTATATATCGGtgaggaaaccgggttcttt
taattattttcggttcacagtaaaaaggtctactaaaaaattcctcgcgt
gcaaaatgttgttgtgatttgggcatcttcattgaaagcatgctaattag
ttttttagtgattactacatcgttaaagtgttcttttcaaatataagtaa
taacaattcacatttctcatattatattttaataatctgtgacgtgatag
agagagagtacaatttagtgattgattgataactttggtatgtatttttt
tatgtttgattttttaatttgaagaccagcctacagctatgccGAGATGG
GAAGACGtgtgtcgagattagacgatcctacggtatGTTTGACTGATTCA
ATAGTACTAGATTTTATTCACTTTCGTACGGTACTTaagcccacgctaaa
aagctctaacgggGCGGGTAATCCAATTTAAtctaatcgcaatcaaactc
atcaaacataatcgtaatcgaacgaaatcgaatgtaattgataatcaatc
gaaccaattgaacatagtcaactatcaatcgaaccaatctaaccttactc
gaacgcagtcaaacacaatcgaatattacccaggattcgGCCGCTCGAtt
aagattcgattacgttcgacaatcgaatcgcaattatttgattgcgttca
attacgtttgattggttcaattgcaatttttgttcgaagttgatcgattg
acaccgtctggttatgtggcatttttttagcaaacttcaaaaaactgctT
GCATGCAGCATAggcagtgtagctctaaagctctaaaacagcatctataa
taacatgaaaaccagaaaatGATTAACTttgatgggaatcaaaactataa
agggcactaacaaacatcaatatgtcagatctaacaaaattaataacggc
actgtcatcattcagtgaagtcaagtttgaagatattctttattagaaaa
gcAGTTAAAAgtagtcaaaacgcaatttaccttacctcctgagtttgtct
ttgttatgctaaaatataacaaacctttgtcatgctgattaattacaaaa
acctccgatcactacttctccgccatcttgtttcactttaaaggccgtgt
tttaaaattccttagctacattatatgtacggaaaaggttttTTCAATCC
TGGTATTAAACTGCGAGGGCGGTTCCGcccgcttatttttctttcggtgT
TGAGCGCCCcggggatacttaacaataaaagagattttaagcagtgctgc
aaataacggctggtgaccggtaattaccggtcattttTAAGCTAATATGT
GTGTTTTTCCCGTGAAATTTTGATGGTTTCATTGTTAGTGCTTTCTGATT
GAGTAATCACCAGCCAACTTGAAattccttatttgcagcactgttaagat
taatgttgaaaagcatattttttcgataaatttaggcgatactcaacaaa
aaataaggtggttttaaacaaatctttgacaaattggcgtttctttctgt
cCTAATAGatgcaaatcacgtcgaaaaaagaatatatttccgccttcact
ttcactttcgctttcgtgttaGCGATTCCAATCGGATGAATACtgctcgc
taacaaattctgattggctgttaagtctttagcttcgggattctgattgg
atcatttcccgcgtcacggttgaattttgattggttgaaagtttctgagg
gTGAATTCTGActggatgaatacctgaaaagtaaacaatagtatgtaagt
attttgcttatcaaaacctaaagatttccagggggttttatttactttgc
atgacgataattaagcctacaaaacacNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAAaccaacatagaacaggtgtattttgtaa
tgtagaatatgatagcgtgaatctttttgaaattctatgtcaggattttt
tctcaatgccccgtaactatgtccggggtacccgttgctaaAACCTTAAA
AAACGAAAGCAATTACGGtaaaaagtagcgattttcgtaagacctcaaat
attgatacttgactgtactgtcattgacaataaaacaaaggattttctgt
caagagtcttgtaaacattccaacaacttccatcgaaatgatctgtcaca
gctgagtcttccatttttaacacggtccgaggattgagccgagaacgctc
gcaGAACGCACACAAGCTCCCGTGCAGGTGAAAattttaatctgtcaatc
aacttctcaagcgaagagtacgcaaaaagtacgcgaagcgattctagctt
tacaatagtgccgcggatcatcagtggatattattaaattatcattatcc
ctttattttcattcctagaacttttgcaaaaaaaaggaaaaatagaaaag
ttgtattttttacttctctattcacatactgaattttgaaagatcttcta
tgtggcgtttttttgcaaatttcaaaaaactgttttgtcCCGCTTTtacg
ggactttggcttaagtgctagtgtgcagcatagggtacaaaatCCAAATA
TgcatttcccgtaatttttgtatgaagagttaggtctatactgataGGGT
ACCgagaagtcaggtaacttgcatcactggaggctaacatgcatagcctt
caaatgactgaccaatcaaagcagcaaaatttcaaaacaaatgaactacg
cagatccggtcacagctctactctaccatttttgttttgatttaactttg
tattttaaggaccagccaggtcattcatttgagggctatgcatgttagcc
tccactgatgcaagttacccgccTTCAGTTCacggtacaaagtccaaata
tgtgtttcctgtaatttttgtataaaaagagttaggtctatactgacaGT
CATACAAacaagtcataaaactaaaagtcagcgctcCGTGGTTGTGACGC
AGTTTATGAAATTGTTAAGAAAAAATGACAtacttttaacaacttttttc
tacgtcattttcagaatttctgATTTCCGATatcggaaaatcagaaaaat
tgggCAAAGATTTGagttttgcttcgaaatttttatctcacgcaAAATTA
ACATCTCAAGCTGGCAGTTCTGcattttttaaaaacctttttagGAGAAT
GTGTCCTTCTATAAgaaattttataacacttcatggtAGATAAACAAGAG
GATCAGAAAGCGAaggcttcttcgtttttcattttcgcatttatggggaa
gaatgaaattttcagaagatgcttcATTTAatatgaggattcccatttcc
gtaaaATCGTGATTCCCCACGGTTGCGAAATGGTGGCTATGGGTAATTAC
TTTagtcttttgctattttcttttgttctatgtgGCGTAAAGACGCTTcg
aagtacttccactaactaTAAGttctttctcatcttcaatgagtcacgcc
gacattcctttccacgtcagcaatctagtttttataaatataaaaactag
attgtaaggaagattctaaaaaaaaaatagccGTTTTCTTAGACCACTAC
GTTGTGTACAAACTAAAGAAGTTTTGTTATAATGACTTAACTTTTAGAGC
TAATCAAAGCACATAACAATGAAATTTGGAACCTTGCTGGATTACCATCT
CTTCAACTCAGATATTGCAAAAAGTATTTTATCACCTCTCATACTGAAAG
GAGGGCGTCGTCACTATGGATTACTAGAATCACCTGTCACAAATCTTTAC
ACTGGAGAGGTTGCATACAAAGTCTTTTTGTGTGGAAAAACAGGATCTGG
AAAGTCTACTACAATAGCAAATGCATCTGGCAGGTTTGGATTGGAAAACC
TTGGAGAGACAACCGGCATACAAGTTACTACTGTGTATTGGCCTGTTTTG
ATAAATGAAACAAAAGCCACTGTCCTCTTCAAGATATCCTTTTGGGATGT
AGGTGAATCAGTTTTGAATAGTTACAATCATATTTTACCATCATGTATGG
AGGATGTTGACTGCATAATCTATACATTCTCAATGGTTAATAAAACAATG
TGGGATGATTTACCAAAGCTTATAACACGTATTGATGCTGAAGACCATAT
TCTAAAAGTTGCACTAGGTACAAAAAATGATTTAACAAAGAACAGTAAAA
CAGTTATCACAAACAAAATGATTGATGATTTCCAAGATGTCTGGAAGTTT
CCTGTGTTGATGCATACCAATGCGATAAATTCAGAGCTTACTGGagattt
ttcagattgtttCAAAAAGTCTGCATCATTTATGAATCCTTTATGTGAAT
TACTTTGGTATAGAGATCAAGTTAAAGTTGGGCTTATCCCTAAAACCcat
attgatttttgttttaCAAACAGTGACAATAGGAAGGACGGAAATGAAAA
TGAACCTGGATCTCCTGACGAAGGAAACAGTATTACTTCAAAAGGTACAA
AAgtgactttttgctaaatttgttAAACATAATGTATATAAGGCAATTGT
AATGTACATGGTGGGAATTTAATCTCTGATTTATATCTCTCCCATTTGAT
ATGTCTGaatttttcaatacgtcaaGGTCCACATTCGTAAGTCTAAACTA
TTCTTAATAAACTGAAAGCAGCAAGCTGCTTTCATTAAAGTTACTCCAAA
AGTTTTGGCTTGCACTATGTGCTTAAAATTGCCCTTTGTTTAAACCTGCC
CTCACTGAAGTGTTTTTTATCAATCAAGAAATCGTGTACTTAGAGCATAT
ATTGTAATGGCCTTGTAGTTGTGATAGACAAAAGTTCTTTGTTGCCTTTC
TCTGGTCTAAAATGGAAGATATTGATTCAGTGGTGCCACTTGAGAGTTTG
CCAATACTNGGTCTAAAATGGAAGATATTGATTCAGTGTTGCCAATTGAG
AGTTTGTCATTACCCACAAAAGCCCTTAACTAATGTAAGTGGCTTGAGCA
TAACCCAActatttgatttgattctttgaAATCTAGGGACATTTGAGAGG
CAATCTCTTTAgtttttatagtttttaaaaACTTATTATTTGTACATAAT
TGTGTCGCACATGCCTAATGTGTCTTTTCTGTCAAACTTATTGAATACAt
acatatttttgaaattaaatttttattattctttattttattagaTCTTA
TCTCCTAACCTCATCCTCATCATCCTTCGATCTAGGACTTTAAAGACCTA
GACCTAGACCTTCTTTTTATTCTGTTTTAgtacaataaagaaaaaaatca
aaaaaaatcatggCTAATGTTGTTGCTGAAATGGAAAAGGCTGCGGCTAT
CTTGATGGTAGGTTTTTTCTACTTGTTTTCCTTTGTTAGcatagttttta
aaattttttctaatCCTCTGGCTTAAACTCCATTGTTATGCCTTGTTTCC
TTCAATTATAGGCACACCCTGGTTTGGTGACTTCTGAGGAAAGACAACAT
GCTGAACAGCTCTTTTTGGAGTTTCGTAAAACAAAGCAGCCTTATGAAAT
CTGTCAAAGTATACTCAGTAAGAATAACCAAGAtgatataaaaaaagctt
taatttttttttttaattcattttctcCCAGATTAAAATTTTAGAGTGTT
ATTAATGGTTCAGACTATTCAATAATTATCATAGAATATTGCAGTATATA
TGCTAATTTATggttttttccctttttttagaaTCATGCACTGTAGAATA
TGTTATATTTGAGGCTGCAACAACTCTAAAAGAGGCGGTGATTAGAGAAT
GGTCTCTTTTAGAGAAATCAGAAGTCGAGCAATTATGCGGCTTCTTGCTG
CAAACTGTCACCGAGAAAGTAGAGTAAGTAGTctcaataattgttttttt
ccaacaaaaTCTTTCACTAATCATTGATCCATCCAGTTACTGTTATACTT
ATTGTTAAAACTCCTAAATATattctctgaaaaaaaaactgaacaCCATT
GATATCATCCCTTTTCAAACATAGAATAAATTACTGCTAGGATTTAGCAA
ATTGGCTATAGCAACAACTTACAAACATAGTATACATGCAACTGTTATAC
AGTTCATAATGACAAACACTGTTCCACATATAAACcatctaatttttttc
aaactttctagGTTTCCAAACTTTGTTAGAGAACAGATATTGTTAGCAGT
TGCTGTAATCTTCAAACTTGGAACATTGGAATCTCCAGATGCTAGAACTA
ATTTGATTAATGGGTTGAATGAGTTGTTGACTAGTGGTAACAAAAACATG
GTAAGCTGTTAGAATTCTTAAATTTTAACTGGTGttattttagcattttc
tttcttcaaacaTAATGATCCTTGAAATAAGCCCACCCAGATGggacaca
acgttatttcaacgttcatctaacgttataatGGGCGTTGTGaagattag
ataaacgttgaaacaatgtttgcCAAATAACCTTTGCCACCTGGGTAGCT
TTTGGTTGACTTTAAGAAGGGTAACATTTTAATCACTTTTAATTGTGATC
CTGAAATAGGACagggggggtgaagcagttactacaagacatcatgccgg
ttagtaccgtggtggtgtgcCATATGAATTGGATAAAGTCACTTAGTACT
CAGATGTACTAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCTAACTTCTTCCGAGAAAGCAgttagtaggcatgatg
tcttgtactaactgcttcccccccccccccctgaatagGAAACGATCTCT
TTTATTTATCAAAATGTGCACGAAAAGTTACAttagaattcacttgtcaa
aaaatggaccaaaaaaaaacttttggatCACTAATTGATTCAAATGttga
aaaaaccttttaaaggtagtattatttttaaaattggttTAGGAGCTGAT
ATGCTGTTCAATTATGAAAGCATTACTTACTGAATATTCAACCACAAGTC
AATCTACCAACTTTGGCATGAGTTTGGATTTCCATGCAAAGTGTAAAAAG
ACGTTTGAggtatttttatttattatattgTTTTTATGTATTTATTAGAT
AACAAAGCATTGGTTTGTTTTCTAAGCTAAAATGGTTTTTAAAAACCATA
GATTTTGCAAAACTTTGGGACTTTTTGACGGCTGGAAAGGCTCATTCACG
TATAGCTTAtactgatgtttttttttctattgtagGAAAAGGATCTGTTG
AATCTCTTCATTTTGACGATCAACGCTCTTCAAAAATACACATCTGCTCC
TATCTCTTCACTTGGACGTGAAGATATTGCAATATTAAATCGCTACCTGT
CTTTAGCTGAACAAATATTCCTCTGGGAATTCATGAGCGGAAATCATATC
CTTTCAGAAAAGCCTTTTCAAGAGCTAGACTTGATAGTCTCCTTTGCTAG
ATTCCCCAATTTCCTTAGGCTTTATTtatgaaaattgatttaaatgaaat
taattttaaaattaatttcccTAACTCATCTGGTGCTTCATATTAACAct
tatctttgaaaaaatatggtGGAAGTAAGCCTAGATCTGCATGTTGTTGA
TGTTATTACTAGTTTTTGATTGATAGTCATGAATCTGACCTAAATATATT
TGAGAATTGCTAAACTCCCTTTATTAAGTGACTTTAATGCCAAAAATGAT
ACCAATTGAATAAAGTAATGTTTACCTTAACTCCTGTGCACCTTTATTGC
TGCTTCGTTTTCCTCATTTGAATGAGACCGCTTCCAAATTGANTACCTTA
ACTCCTGTGCACCTTTATTGCTGCTTCGTTTTCCTCATTTGAACGAGACC
GCTTCCAAATTGATTTTCAAACCTCACAAGAATTGGAAAGAAATGATGTT
GAACCCAAACTTGATCGATATGTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004719XLOC_004719Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008423-exon-sc0000085-1491911889:551133..551183TCONS_00008423-exon-sc0000085-1491911889:551133..551183Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1510915933:551133..551183TCONS_00008423-exon-sc0000085-1510915933:551133..551183Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1575043694:551133..551183TCONS_00008423-exon-sc0000085-1575043694:551133..551183Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1491911889:559113..559189TCONS_00008423-exon-sc0000085-1491911889:559113..559189Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1510915933:559113..559189TCONS_00008423-exon-sc0000085-1510915933:559113..559189Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1575043694:559113..559189TCONS_00008423-exon-sc0000085-1575043694:559113..559189Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1491911889:559294..559399TCONS_00008423-exon-sc0000085-1491911889:559294..559399Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1510915933:559294..559399TCONS_00008423-exon-sc0000085-1510915933:559294..559399Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1575043694:559294..559399TCONS_00008423-exon-sc0000085-1575043694:559294..559399Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1491911889:559564..559705TCONS_00008423-exon-sc0000085-1491911889:559564..559705Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1510915933:559564..559705TCONS_00008423-exon-sc0000085-1510915933:559564..559705Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1575043694:559564..559705TCONS_00008423-exon-sc0000085-1575043694:559564..559705Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1491911889:559994..560132TCONS_00008423-exon-sc0000085-1491911889:559994..560132Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1510915933:559994..560132TCONS_00008423-exon-sc0000085-1510915933:559994..560132Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1575043694:559994..560132TCONS_00008423-exon-sc0000085-1575043694:559994..560132Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1491911889:561125..561241TCONS_00008423-exon-sc0000085-1491911889:561125..561241Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1510915933:561125..561241TCONS_00008423-exon-sc0000085-1510915933:561125..561241Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1575043694:561125..561241TCONS_00008423-exon-sc0000085-1575043694:561125..561241Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1491911889:561418..561577TCONS_00008423-exon-sc0000085-1491911889:561418..561577Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1510915933:561418..561577TCONS_00008423-exon-sc0000085-1510915933:561418..561577Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1575043694:561418..561577TCONS_00008423-exon-sc0000085-1575043694:561418..561577Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1491911889:561924..562108TCONS_00008423-exon-sc0000085-1491911889:561924..562108Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1510915933:561924..562108TCONS_00008423-exon-sc0000085-1510915933:561924..562108Clytia hemisphaericaexon
TCONS_00008423-exon-sc0000085-1575043694:561924..562108TCONS_00008423-exon-sc0000085-1575043694:561924..562108Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:551133..562108 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.40312	3.88655	1.73727	0.339381	9.16099	5.27355	5.01835	5.08495	2.45152	3.50985	1.1239	1.02659	0.584341	0.614467	0.706829	3.43856	2.27088	2.13726	0.361236	0.662542	2.66397	2.69582	3.65237	3.59572	0.988664	1.9645	0.915363	0.489987	4.24635	3.70742
Blast
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BLAST of TCONS_00008423 vs. Swiss-Prot (Human)
Match: XPO4 (Exportin-4 OS=Homo sapiens GN=XPO4 PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 3.956e-61
Identity = 103/234 (44.02%), Postives = 166/234 (70.94%), Query Frame = 3 
Query:   90 VVAEMEKAAAILMAHPGLVTSEERQHAEQLFLEFRKTKQPYEICQSILKSCTVEYVIFEAATTLKEAVIREWSLLEKSEVEQLCGFLLQTVTEKVEFPNFVREQILLAVAVIFKLGTLESPDARTNLINGLNELLTSGNKNMELICCSIMKALLTEYSTTSQSTNFGMSLDFHAKCKKTFEEKDLLNLFILTINALQKYTSAPISSLGREDIAILNRYLSLAEQIFLWEFMSGN 791
            V+A++E AA +LMA P +V +E+RQHAE +FL FRK+K P+ +C+ IL++  V+YV+F+AAT + EAV+REW LLEK  +E L  FLL  V ++     +VREQILLAVAVI K G+L+      ++ + +++L++SGN  ++ + CSI+ ALL+E+S++S+++N G+S++FH  CK+ F+E+DL  +F+LT+  LQ+++     +L  +  ++  RYL+LA Q+  W F+  N
Sbjct:   11 VIAQLENAAKVLMAPPSMVNNEQRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKGSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRVFQEEDLRQIFMLTVEVLQEFSRR--ENLNAQMSSVFQRYLALANQVLSWNFLPPN 242
The following BLAST results are available for this feature:
BLAST of TCONS_00008423 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XPO43.956e-6144.02Exportin-4 OS=Homo sapiens GN=XPO4 PE=1 SV=2[more]
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