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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008374 ID=TCONS_00008374|Name=TCONS_00008374|organism=Clytia hemisphaerica|type=transcript|length=1373bp
tttagagAAGTTGTTAGAATAAAACAAATCTCATGCTTATTATTTTCCAA
TGGCAATTTGAAGAGTAGCTGATTGACTACTAATGTCTTATATAACCAGC
GAGCCCCACCAGACAGCCCATGCAGTAATGTTAACCTAAAAGCGTATTTA
TCAAATCACATCATGGCAGCTGCTTTTTTGCCGCTGTGAAAGATGCAACA
CTGGCAAACTGAAGAATGAATTTATCAGATGAGATTTAACGTAACATCAA
CCAATTTATGGAATAAACTTCATTTTCGTTGAATTGAGTTATAAAAAACT
CTGAGAGATTACTGTGTTTTTTAGCCCTGGTATTTCTGGTTGCTAAAATT
AACATTGCTTAGTTTGGTGTTAAcgtacatgtttaaaattttagaatGAC
ATTTTTGTCCTGCAAATAGTTGTACATGGATCGTAGTATTTATACATTTG
GCAGCCAAAGACACTGAAAGGATTTTTGCAATAACGAACATGGCCATtgt
ttaaatattatattgtggacatcaaatgataagatttacgagaaaaagaa
aatattatgatgatgatgatggacaCCTGACAATGTTTACTTTGCAGATC
AAATTtatgaaaacataaaacaaaaacatgaaaactataatgaaaacatg
aaaactaTAATGCTGCTATTCATGAAAATGTTTAATTAACCAGGAAAAAT
CACCGTGACATTTTAGTGAATTCatggtgaaaagctgcaatcatTCAATA
ATTCACTCAAAAAAGCTGTGAATTGTTGAAAGGTTGCAACTTTTCACCTA
GTTTCAAtgtgaattcactaaaaagtcacaaggaatttttctgaattttt
tcctgtgtactgtcaacggctctaacttgggacgagtggtcatataatgg
gatggttgactttctggtctgtattttcacttactgttaaatctttcTTG
ACAACAAAGTTGTTTTCTATGAGATTTGCGATTGTGTtgattaaatgact
ttggaggttctgtAAAAtgatggccgaattgctgtcccatgttttatcag
actgtcccaagttagagccattGACAGTAAGTATATCTTCAGATCTTGCA
TGCTAATTTacatcaattatattaaaaatactataaaaatactaattttt
gcccaaaagtataattattttccaaaaaaaaaaaaaaacacattcaaGAT
TTTGGGTTATTTCCAGATTTTCTAGAGGGCAGTACCGTAGACAGGAGGGG
TGCAAAATTTGTAGGAGAGCTGATTTTTATGAGAcaataattatattttt
atattatgaatagataattactatGCCATGAAAGTCTGCTCTTCTACACG
AATTTTGggcccctcttgtctac Run BLAST on NCBI transcript from alignment at sc0000084:638334..639706 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008374 ID=TCONS_00008374|Name=TCONS_00008374|organism=Clytia hemisphaerica|type=transcript|length=1373bp|location=Sequence derived from alignment at sc0000084:638334..639706 (Clytia hemisphaerica)
gtagacaagaggggccCAAAATTCGTGTAGAAGAGCAGACTTTCATGGCa
tagtaattatctattcataatataaaaatataattattgTCTCATAAAAA
TCAGCTCTCCTACAAATTTTGCACCCCTCCTGTCTACGGTACTGCCCTCT
AGAAAATCTGGAAATAACCCAAAATCttgaatgtgttttttttttttttt
ggaaaataattatacttttgggcaaaaattagtatttttatagtattttt
aatataattgatgtAAATTAGCATGCAAGATCTGAAGATATACTTACTGT
Caatggctctaacttgggacagtctgataaaacatgggacagcaattcgg
ccatcaTTTTacagaacctccaaagtcatttaatcaACACAATCGCAAAT
CTCATAGAAAACAACTTTGTTGTCAAgaaagatttaacagtaagtgaaaa
tacagaccagaaagtcaaccatcccattatatgaccactcgtcccaagtt
agagccgttgacagtacacaggaaaaaattcagaaaaattccttgtgact
ttttagtgaattcacaTTGAAACTAGGTGAAAAGTTGCAACCTTTCAACA
ATTCACAGCTTTTTTGAGTGAATTATTGAatgattgcagcttttcaccat
GAATTCACTAAAATGTCACGGTGATTTTTCCTGGTTAATTAAACATTTTC
ATGAATAGCAGCATTAtagttttcatgttttcattatagttttcatgttt
ttgttttatgttttcataAATTTGATCTGCAAAGTAAACATTGTCAGGtg
tccatcatcatcatcataatattttctttttctcgtaaatcttatcattt
gatgtccacaatataatatttaaacaATGGCCATGTTCGTTATTGCAAAA
ATCCTTTCAGTGTCTTTGGCTGCCAAATGTATAAATACTACGATCCATGT
ACAACTATTTGCAGGACAAAAATGTCattctaaaattttaaacatgtacg
TTAACACCAAACTAAGCAATGTTAATTTTAGCAACCAGAAATACCAGGGC
TAAAAAACACAGTAATCTCTCAGAGTTTTTTATAACTCAATTCAACGAAA
ATGAAGTTTATTCCATAAATTGGTTGATGTTACGTTAAATCTCATCTGAT
AAATTCATTCTTCAGTTTGCCAGTGTTGCATCTTTCACAGCGGCAAAAAA
GCAGCTGCCATGATGTGATTTGATAAATACGCTTTTAGGTTAACATTACT
GCATGGGCTGTCTGGTGGGGCTCGCTGGTTATATAAGACATTAGTAGTCA
ATCAGCTACTCTTCAAATTGCCATTGGAAAATAATAAGCATGAGATTTGT
TTTATTCTAACAACTTctctaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008374-exon-sc0000084-1491911889:638334..639706 | TCONS_00008374-exon-sc0000084-1491911889:638334..639706 | Clytia hemisphaerica | exon |
| TCONS_00008374-exon-sc0000084-1510915933:638334..639706 | TCONS_00008374-exon-sc0000084-1510915933:638334..639706 | Clytia hemisphaerica | exon |
| TCONS_00008374-exon-sc0000084-1575043694:638334..639706 | TCONS_00008374-exon-sc0000084-1575043694:638334..639706 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084 | supercontig | sc0000084:638334..639706 . |
Blast
The following BLAST results are available for this feature:
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