TCONS_00008361 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008361
Unique NameTCONS_00008361
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008361 ID=TCONS_00008361|Name=TCONS_00008361|organism=Clytia hemisphaerica|type=transcript|length=199bp
cgaaagtttgtacgcctaaagtataccTGGTTATCTAGGGTAGAATAGTC
TCGCGAAGAGAAGTTTTCACAAAATCTTCAAACTTCGTTACATTTTCACA
TTATAATATGTACATAGATTATGTAGATTTGTATTTTGTTGATAACAAGA
TAAAGGCTGGTACTGTAACAACGAATAATATAAACCCTGAACAAAAACA
Run BLAST on NCBI

transcript from alignment at sc0000084:333190..333388

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008361 ID=TCONS_00008361|Name=TCONS_00008361|organism=Clytia hemisphaerica|type=transcript|length=199bp|location=Sequence derived from alignment at sc0000084:333190..333388 (Clytia hemisphaerica)
TGTTTTTGTTCAGGGTTTATATTATTCGTTGTTACAGTACCAGCCTTTAT
CTTGTTATCAACAAAATACAAATCTACATAATCTATGTACATATTATAAT
GTGAAAATGTAACGAAGTTTGAAGATTTTGTGAAAACTTCTCTTCGCGAG
ACTATTCTACCCTAGATAACCAggtatactttaggcgtacaaactttcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004690XLOC_004690Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008361-exon-sc0000084-1491911889:333190..333388TCONS_00008361-exon-sc0000084-1491911889:333190..333388Clytia hemisphaericaexon
TCONS_00008361-exon-sc0000084-1510915933:333190..333388TCONS_00008361-exon-sc0000084-1510915933:333190..333388Clytia hemisphaericaexon
TCONS_00008361-exon-sc0000084-1575043694:333190..333388TCONS_00008361-exon-sc0000084-1575043694:333190..333388Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:333190..333388 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	9.11356	5.40124	8.68849	16.2681	1.42371	0	0	5.626	1.12364	0	0	0	0	0	0	1.87936	0	0	3.8743	0	3.62789	3.23781	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008361 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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