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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008355 ID=TCONS_00008355|Name=TCONS_00008355|organism=Clytia hemisphaerica|type=transcript|length=825bp
CCACCCgttaacataatttttttttagttttttttcgaagCGTTTTGATA
TAGATAGAAAATGGGATGGGACATGGTCAGATGGTTCCACTCGCTCCATA
ACtgaaaaatttcgagaaaagctCGTTTTCGCCcccttttgatgacgtca
tgaaaaaaatcttaaataacttcaaataggagaaagcttttgatttcaaa
ttttcaccaatggTGTAAATCGATGAAAGGAAGCGATCtacgaaaaaaat
taaaaggttTTTGCCTAAAGTTAGTTTTTTATCAACCACGGGAGTATATC
GAGTAGTGCGAAGATATCTCGTAAATACCTTTTTATGCTTTAAATGGAAT
AAGAGANGCCAGCTTGCGGTgcaagatcaaagaatcactgTAATCTCCCA
TAATAATGTCTTTTGATCCACGGGAATAAACAACATCACCAACATAGAGT
GGTAGCCTATCAGCATATCTCTTTGTGATGCAAACCTTCTTAGCTAGGTC
ATAATCTGTGATGACAATAAAGGGCTTATCGGCCATCCATAGGGTGAACA
TTGTTCCGTATTCTTTTGATAACTTATCCATAGCTAAATGAATATCTTTC
CGGAGTAAATGTAAATTTCCGATTATCGGTAATGGAAATGGTCCGGGTGG
GTATTTTCTTATGATGTAACTCTTGTACGCTAACCATATTACGGTTAGGA
AGGCTAGAGCAGTGATGATCATTTCGTTTTGGttctaaaagaaaatattt
ggaatgtcttataaaccttactccttaactcgaacaacttTTTGTTTCCT
GTTCGTGCTCGGGGTACCTAAGGCT Run BLAST on NCBI protein sequence of TCONS_00008355-protein >TCONS_00008355-protein ID=TCONS_00008355-protein|Name=TCONS_00008355-protein|organism=Clytia hemisphaerica|type=polypeptide|length=129bp
MIITALAFLTVIWLAYKSYIIRKYPPGPFPLPIIGNLHLLRKDIHLAMDK
LSKEYGTMFTLWMADKPFIVITDYDLAKKVCITKRYADRLPLYVGDVVYS
RGSKDIIMGDYSDSLILHRKLXSLIPFKA Run BLAST on NCBI transcript from alignment at sc0000084:205152..205976 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008355 ID=TCONS_00008355|Name=TCONS_00008355|organism=Clytia hemisphaerica|type=transcript|length=825bp|location=Sequence derived from alignment at sc0000084:205152..205976 (Clytia hemisphaerica)
AGCCTTAGGTACCCCGAGCACGAACAGGAAACAAAaagttgttcgagtta
aggagtaaggtttataagacattccaaatattttcttttagaaCCAAAAC
GAAATGATCATCACTGCTCTAGCCTTCCTAACCGTAATATGGTTAGCGTA
CAAGAGTTACATCATAAGAAAATACCCACCCGGACCATTTCCATTACCGA
TAATCGGAAATTTACATTTACTCCGGAAAGATATTCATTTAGCTATGGAT
AAGTTATCAAAAGAATACGGAACAATGTTCACCCTATGGATGGCCGATAA
GCCCTTTATTGTCATCACAGATTATGACCTAGCTAAGAAGGTTTGCATCA
CAAAGAGATATGCTGATAGGCTACCACTCTATGTTGGTGATGTTGTTTAT
TCCCGTGGATCAAAAGACATTATTATGGGAGATTAcagtgattctttgat
cttgcACCGCAAGCTGGCNTCTCTTATTCCATTTAAAGCATAAAAAGGTA
TTTACGAGATATCTTCGCACTACTCGATATACTCCCGTGGTTGATAAAAA
ACTAACTTTAGGCAAAaaccttttaatttttttcgtaGATCGCTTCCTTT
CATCGATTTACAccattggtgaaaatttgaaatcaaaagctttctcctat
ttgaagttatttaagatttttttcatgacgtcatcaaaagggGGCGAAAA
CGagcttttctcgaaatttttcaGTTATGGAGCGAGTGGAACCATCTGAC
CATGTCCCATCCCATTTTCTATCTATATCAAAACGcttcgaaaaaaaact
aaaaaaaaattatgttaacGGGTGG Coding sequence (CDS) from alignment at sc0000084:205152..205976 >TCONS_00008355 ID=TCONS_00008355|Name=TCONS_00008355|organism=Clytia hemisphaerica|type=CDS|length=390bp|location=Sequence derived from alignment at sc0000084:205152..205976 (Clytia hemisphaerica)
ATGATCATCACTGCTCTAGCCTTCCTAACCGTAATATGGTTAGCGTACAA
GAGTTACATCATAAGAAAATACCCACCCGGACCATTTCCATTACCGATAA
TCGGAAATTTACATTTACTCCGGAAAGATATTCATTTAGCTATGGATAAG
TTATCAAAAGAATACGGAACAATGTTCACCCTATGGATGGCCGATAAGCC
CTTTATTGTCATCACAGATTATGACCTAGCTAAGAAGGTTTGCATCACAA
AGAGATATGCTGATAGGCTACCACTCTATGTTGGTGATGTTGTTTATTCC
CGTGGATCAAAAGACATTATTATGGGAGATTAcagtgattctttgatctt
gcACCGCAAGCTGGCNTCTCTTATTCCATTTAAAGCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008355-exon-sc0000084-1491911889:205152..205976 | TCONS_00008355-exon-sc0000084-1491911889:205152..205976 | Clytia hemisphaerica | exon |
| TCONS_00008355-exon-sc0000084-1510915933:205152..205976 | TCONS_00008355-exon-sc0000084-1510915933:205152..205976 | Clytia hemisphaerica | exon |
| TCONS_00008355-exon-sc0000084-1575043694:205152..205976 | TCONS_00008355-exon-sc0000084-1575043694:205152..205976 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084 | supercontig | sc0000084:205152..205976 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001128 | Cyt_P450 |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
The following BLAST results are available for this feature:
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