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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008350 ID=TCONS_00008350|Name=TCONS_00008350|organism=Clytia hemisphaerica|type=transcript|length=1420bp
ttttcaaaatgttttttcttcaccgaaactaagctcttcaaagttgaaat
actcttcctcgcaaaagtcttcattttcttcttcgtcaatttttttcatt
gcaattttttaattttcagattcaggaacagtttgtctaacagaaaatgt
ataacatgccatagttttgttggttacatcagtcagaatcATCAgtcaaa
acacattttaaacacggcaattatgagaaattcactatggtcagagccct
taaactcTTATCGCAATTAATCACCTTGTTACTTACGAAAAGGAACAGTA
GGAAGCGGTAGTAAAAACCcgaattttgtttaaatttggCCTTAAGGGCT
CTAACCATAGTTAATTTAATATTTGTCACggacaaaatataaatttctgc
ctgatgtagctaacaaaactttgacatgttatacattttctgttaggcca
actatcctTGGGACCCAAAATTTGAAACAGTTCAATTATTTGCGGACAGT
TTTAAaagatttcgaaacaaaaaggttaattacccattaacaCTTAGCAC
TTTTATAAAAgtgggtgatgcaacatattattaacgtctttttaaagttc
ataacgtcatttttgcaattaaattcctAATTACTCTTaggaaatttaat
taaaaagcaatttgtaaaggcaattctttATTAAAAGTGTAAAGTAACAt
aaattttatgttcaaataccaaaatcaatttttttgactatggtcagaac
CCTTAACTGTGCAAATCGATCAATGGCTCAGGCATTCTGATTTCTAaata
caaaaaagtgaaaaatgattatggAAGGTAGATACTTTATCCGTAATCCT
AAAAGGTCTCCGTGGTTATGTGAAGTgtccttttatttattttgtggCCC
CTATAATGATCTTCGAGCTCCTCAACTATATACAAACACTGCAAGGGGTT
GTTAATAGTTTTTAACcattttgatataattttatgtagattatttattt
ttgtgCACCGCTTGCATATAGAAATTGCACTTGATTTTTACATGTTTTAT
CATATTctttttcgtttaaaaattttcagttaaatagaaaaaaagggaaa
tttctcTCTCGACAAAAGAAGCGCACGTTCCCAAGCTTTTTTTAGACTCA
ACGGCATTGCATTGACACGTGCTCAACCCTAGTTAGAAGCCCAGAATGAA
TTATTTCCCCTTAAAAAACTGACGTTAAGAAATGTTATAGTATTTTATCG
TTATTCATCAATATGACAACCTTGGCCTTAAGAAGTCACTTGAAAATTTA
TCGATGTAGACGACAAATCAGTTTTCGTGACGCCGAAAATGTTGTCATCG
TTAGAATAAGCTTTGAATTGAAACAACGACCGATGACGTGTTGATCCGTG
TTGGTTTTTGTAGGTACAAA Run BLAST on NCBI transcript from alignment at sc0000084:692728..694147- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008350 ID=TCONS_00008350|Name=TCONS_00008350|organism=Clytia hemisphaerica|type=transcript|length=1420bp|location=Sequence derived from alignment at sc0000084:692728..694147- (Clytia hemisphaerica)
TTTTCAAAATGTTTTTTCTTCACCGAAACTAAGCTCTTCAAAGTTGAAAT
ACTCTTCCTCGCAAAAGTCTTCATTTTCTTCTTCGTCAATTTTTTTCATT
GCAATTTTTTAATTTTCAGATTCAGGAACAGTTTGTCTAACAGAAAATGT
ATAACATGCCATAGTTTTGTTGGTTACATCAGTCAGAATCATCAGTCAAA
ACACATTTTAAACACGGCAATTATGAGAAATTCACTATGGTCAGAGCCCT
TAAACTCTTATCGCAATTAATCACCTTGTTACTTACGAAAAGGAACAGTA
GGAAGCGGTAGTAAAAACCCGAATTTTGTTTAAATTTGGCCTTAAGGGCT
CTAACCATAGTTAATTTAATATTTGTCACGGACAAAATATAAATTTCTGC
CTGATGTAGCTAACAAAACTTTGACATGTTATACATTTTCTGTTAGGCCA
ACTATCCTTGGGACCCAAAATTTGAAACAGTTCAATTATTTGCGGACAGT
TTTAAAAGATTTCGAAACAAAAAGGTTAATTACCCATTAACACTTAGCAC
TTTTATAAAAGTGGGTGATGCAACATATTATTAACGTCTTTTTAAAGTTC
ATAACGTCATTTTTGCAATTAAATTCCTAATTACTCTTAGGAAATTTAAT
TAAAAAGCAATTTGTAAAGGCAATTCTTTATTAAAAGTGTAAAGTAACAT
AAATTTTATGTTCAAATACCAAAATCAATTTTTTTGACTATGGTCAGAAC
CCTTAACTGTGCAAATCGATCAATGGCTCAGGCATTCTGATTTCTAAATA
CAAAAAAGTGAAAAATGATTATGGAAGGTAGATACTTTATCCGTAATCCT
AAAAGGTCTCCGTGGTTATGTGAAGTGTCCTTTTATTTATTTTGTGGCCC
CTATAATGATCTTCGAGCTCCTCAACTATATACAAACACTGCAAGGGGTT
GTTAATAGTTTTTAACCATTTTGATATAATTTTATGTAGATTATTTATTT
TTGTGCACCGCTTGCATATAGAAATTGCACTTGATTTTTACATGTTTTAT
CATATTCTTTTTCGTTTAAAAATTTTCAGTTAAATAGAAAAAAAGGGAAA
TTTCTCTCTCGACAAAAGAAGCGCACGTTCCCAAGCTTTTTTTAGACTCA
ACGGCATTGCATTGACACGTGCTCAACCCTAGTTAGAAGCCCAGAATGAA
TTATTTCCCCTTAAAAAACTGACGTTAAGAAATGTTATAGTATTTTATCG
TTATTCATCAATATGACAACCTTGGCCTTAAGAAGTCACTTGAAAATTTA
TCGATGTAGACGACAAATCAGTTTTCGTGACGCCGAAAATGTTGTCATCG
TTAGAATAAGCTTTGAATTGAAACAACGACCGATGACGTGTTGATCCGTG
TTGGTTTTTGTAGGTACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008350-exon-sc0000084-1575043694:692728..694147 | TCONS_00008350-exon-sc0000084-1575043694:692728..694147 | Clytia hemisphaerica | exon |
| TCONS_00008350-exon-sc0000084-1510915933:692728..694147 | TCONS_00008350-exon-sc0000084-1510915933:692728..694147 | Clytia hemisphaerica | exon |
| TCONS_00008350-exon-sc0000084-1491911889:692728..694147 | TCONS_00008350-exon-sc0000084-1491911889:692728..694147 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084 | supercontig | sc0000084:692728..694147 - |
Blast
The following BLAST results are available for this feature:
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