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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008349 ID=TCONS_00008349|Name=TCONS_00008349|organism=Clytia hemisphaerica|type=transcript|length=1435bp
ttttcaaaatgttttttcttcaccgaaactaagctcttcaaagttgaaat
actcttcctcgcaaaagtcttcattttcttcttcgtcaatttttttcatt
gcaattttttaattttcagattcaggaacagtttgtctaacagaaaatgt
ataacatgccatagttttgttggttacatcagtcagaatcATCAgtcaaa
acacattttaaacacggcaattatgagaaattcactatggtcagagccct
taaactcTTATCGCAATTAATCACCTTGTTACTTACGAAAAGGAACAGTA
GGAAGCGGTAGTAAAAACCcgaattttgtttaaatttggCCTTAAGGGCT
CTAACCATAGTTAATTTAATATTTGTCACggacaaaatataaatttctgc
ctgatgtagctaacaaaactttgacatgttatacattttctgttaggcca
actatcctTGGGACCCAAAATTTGAAACAGTTCAATTATTTGCGGACAGT
TTTAAaagatttcgaaacaaaaaggttaattacccattaacaCTTAGCAC
TTTTATAAAAgtgggtgatgcaacatattattaacgtctttttaaagttc
ataacgtcatttttgcaattaaattcctAATTACTCTTaggaaatttaat
taaaaagcaatttgtaaaggcaattctttATTAAAAGTGTAAAGTAACAt
aaattttatgttcaaataccaaaatcaatttttttgactatggtcagaac
CCTTAACTGTGCAAATCGATCAATGGCTCAGGCATTCTGATTTCTAaata
caaaaaagtgaaaaatgattatggAAGGTAGATACTTTATCCGTAATCCT
AAAAGGTCTCCGTGGTTATGTGAAGTgtccttttatttattttgtggCCC
CTATAATGATCTTCGAGCTCCTCAACTATAAACACTGCAAAGGGTTGTTA
ATAGTTTTTAACcattttgatataattttatgtagattatttatttttgt
gCACCGCTTGCATATAGAAATATTTGCACTTGATTTTTACATGTTTTATC
ATATTctttttcgtttaaaaattttcagttaattagaaaaaaagagaaat
ttctCTCTCGAAAAAAGAAGCGCACGTTCCCAAGCTTTTTTTAGACCCAA
CGGCATTGCATTGACACGTGCTCAACCCTAGTTAGCAGCCCAAAATGAAT
TATTTCCCCTTTAAAAACTGACGTTAAGAAATGTTATAGTACCTATTTTA
TCGTTATTCATCAATATGACAACCTTGGCCTTAAGAAGTCACTTGAAAAT
TTATCGATGTAGACGACAAATCAGTTTCGTGACGCCGAAAGTGTTGTCAT
CGTTAGAATAAGCTTTGAATTGAAACAACGACCGATGACGTGTTGATCCG
TGTTGGTTTTTGTAGGTACAAAACAACTAATAGAA Run BLAST on NCBI transcript from alignment at sc0000084:691309..694147- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008349 ID=TCONS_00008349|Name=TCONS_00008349|organism=Clytia hemisphaerica|type=transcript|length=2839bp|location=Sequence derived from alignment at sc0000084:691309..694147- (Clytia hemisphaerica)
TTTTCAAAATGTTTTTTCTTCACCGAAACTAAGCTCTTCAAAGTTGAAAT
ACTCTTCCTCGCAAAAGTCTTCATTTTCTTCTTCGTCAATTTTTTTCATT
GCAATTTTTTAATTTTCAGATTCAGGAACAGTTTGTCTAACAGAAAATGT
ATAACATGCCATAGTTTTGTTGGTTACATCAGTCAGAATCATCAGTCAAA
ACACATTTTAAACACGGCAATTATGAGAAATTCACTATGGTCAGAGCCCT
TAAACTCTTATCGCAATTAATCACCTTGTTACTTACGAAAAGGAACAGTA
GGAAGCGGTAGTAAAAACCCGAATTTTGTTTAAATTTGGCCTTAAGGGCT
CTAACCATAGTTAATTTAATATTTGTCACGGACAAAATATAAATTTCTGC
CTGATGTAGCTAACAAAACTTTGACATGTTATACATTTTCTGTTAGGCCA
ACTATCCTTGGGACCCAAAATTTGAAACAGTTCAATTATTTGCGGACAGT
TTTAAAAGATTTCGAAACAAAAAGGTTAATTACCCATTAACACTTAGCAC
TTTTATAAAAGTGGGTGATGCAACATATTATTAACGTCTTTTTAAAGTTC
ATAACGTCATTTTTGCAATTAAATTCCTAATTACTCTTAGGAAATTTAAT
TAAAAAGCAATTTGTAAAGGCAATTCTTTATTAAAAGTGTAAAGTAACAT
AAATTTTATGTTCAAATACCAAAATCAATTTTTTTGACTATGGTCAGAAC
CCTTAACTGTGCAAATCGATCAATGGCTCAGGCATTCTGATTTCTAAATA
CAAAAAAGTGAAAAATGATTATGGAAGGTAGATACTTTATCCGTAATCCT
AAAAGGTCTCCGTGGTTATGTGAAGTGTCCTTTTATTTATTTTGTGGCCC
CTATAATGATCTTCGAGCTCCTCAACTATATACAAACACTGCAAGGGGTT
GTTAATAGTTTTTAACCATTTTGATATAATTTTATGTAGATTATTTATTT
TTGTGCACCGCTTGCATATAGAAATTGCACTTGATTTTTACATGTTTTAT
CATATTCTTTTTCGTTTAAAAATTTTCAGTTAAATAGAAAAAAAGGGAAA
TTTCTCTCTCGACAAAAGAAGCGCACGTTCCCAAGCTTTTTTTAGACTCA
ACGGCATTGCATTGACACGTGCTCAACCCTAGTTAGAAGCCCAGAATGAA
TTATTTCCCCTTAAAAAACTGACGTTAAGAAATGTTATAGTATTTTATCG
TTATTCATCAATATGACAACCTTGGCCTTAAGAAGTCACTTGAAAATTTA
TCGATGTAGACGACAAATCAGTTTTCGTGACGCCGAAAATGTTGTCATCG
TTAGAATAAGCTTTGAATTGAAACAACGACCGATGACGTGTTGATCCGTG
TTGGTTTTTGTAGGTACAAAACAACTAATAGAAAACATATATTCTTTTAA
ATTAAAAACTTCGGGAAATAGTCTCGTGAAAACGTCAATGATATTAGATT
GATGAAATCTCTAAATCTAAATCCCTAACTAAGGGTTGGATCTCCAAACT
TTGGATTTGACATACCTGTCAATCTCACAATTTTTTGGCTGAAAACTCTG
AAAGTTATGGGGAAATAGCAAATACTCTTAGGTTCAAAATAAACGNAGAG
TTAACTCTACTTCTACATCAATTCTTTTGACGCACTTGTTGTTCGCCTAA
TAGGAAACCTTGATTAGTTTTAATAAATCCTTTTGGATTTGATATCTCTA
GGATGTTTTTAATATGTAAGCTTTCAAAGCTAAAGTCGTACTTTTTCATA
CAACGAGGTCGGTGCCCTATCATCAAATTGAAGACAAGTTCCGAACATAT
TTTACGTGAATGAAGCTCACCTCTTCCTATCGTTCCGTAACTTTCGGTAT
AAAGCTCAAAAGAAGCGTATGAATGTGGGGATTTCGGAAAGTACATGTTC
AAAGATTTAAATTCTACCAATGTCAAGATACCGACCAAAAACTTATTTTG
ACGTTATGAAATACGTCAAAAAAAGACACGTCAAAAGGAAAGGGATAACT
TAAACTCTTATCGCAATTAATCACCGAATCCTGACTGAAGACGCTGTCTT
TTGAATTACTTACGAAAAGGAACAGTAGGAAGCGGTAGTAAAACGCGAGT
TTTGTTTGAATTTGGCCTTAACTGTGAGAATCGATCAATGGCGTATAAAT
ATGCTTCTAAATACAAAAAAGTGAAAAATGATTATGGAAGGTAGATACTT
TATCCATAATCCTAAAAGGTCTCTGTCTCAGGTCTCTGTGGTTATGAGAA
GTGTCTATAATGATCTTCGAGCTCCTCAACTACAAACACTGCAAAGGGTT
GTTAATAGTTTTTAACCATTTTGATATAATTTTATGTAGATTATTTATTT
TTGTGCACCGCTTGCATATAGAAATATTTGCACTTGATTTTTACATGTTT
TATCATATTCTTTTTCGTTTAAAAATTTTCAGTTAATTAGAAAAAAAGAG
AAATTTCTCTCTCGAAAAAAGAAGCGCACGTTCCCAAGCTTTTTTTAGAC
CCAACGGCATTGCATTGACACGTGCTCAACCCTAGTTAGCAGCCCAAAAT
GAATTATTTCCCCTTTAAAAACTGACGTTAAGAAATGTTATAGTACCTAT
TTTATCGTTATTCATCAATATGACAACCTTGGCCTTAAGAAGTCACTTGA
AAATTTATCGATGTAGACGACAAATCAGTTTCGTGACGCCGAAAGTGTTG
TCATCGTTAGAATAAGCTTTGAATTGAAACAACGACCGATGACGTGTTGA
TCCGTGTTGGTTTTTGTAGGTACAAAACAACTAATAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008349-exon-sc0000084-1575043694:693219..694147 | TCONS_00008349-exon-sc0000084-1575043694:693219..694147 | Clytia hemisphaerica | exon |
| TCONS_00008349-exon-sc0000084-1575043694:691309..691814 | TCONS_00008349-exon-sc0000084-1575043694:691309..691814 | Clytia hemisphaerica | exon |
| TCONS_00008349-exon-sc0000084-1510915933:693219..694147 | TCONS_00008349-exon-sc0000084-1510915933:693219..694147 | Clytia hemisphaerica | exon |
| TCONS_00008349-exon-sc0000084-1510915933:691309..691814 | TCONS_00008349-exon-sc0000084-1510915933:691309..691814 | Clytia hemisphaerica | exon |
| TCONS_00008349-exon-sc0000084-1491911889:693219..694147 | TCONS_00008349-exon-sc0000084-1491911889:693219..694147 | Clytia hemisphaerica | exon |
| TCONS_00008349-exon-sc0000084-1491911889:691309..691814 | TCONS_00008349-exon-sc0000084-1491911889:691309..691814 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084 | supercontig | sc0000084:691309..694147 - |
Blast
The following BLAST results are available for this feature:
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