TCONS_00008319 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008319
Unique NameTCONS_00008319
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1598

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008319 ID=TCONS_00008319|Name=TCONS_00008319|organism=Clytia hemisphaerica|type=transcript|length=1598bp
AAACCAACTCTGGAAAGAACTCGTGTTAGAAAGAGCTCAGCTCCAGATGA
TGTACGTATCCGAAGGATTTCTGCACCGGTACAACAAGCGGGTGCTATGG
ATAACGGAAAGGCCCGTAGTTCACGCCGCGTAAGAAGTAAAACATACGAT
GGTAATCAGGAGGAGACGCAATCACCTGGTAGTCATCGCTCGTCATCAAG
CTCAAGCGAAAGTCAAATCAAATACGAAAATGATCGATTGAAAAAAGCGC
TTGCTCAAAGCTCATCGAATGCAAAGAAGTGGGAAACTGAATTTCAAACA
TTGAAAAACAATAACGCCCGCTTGACGGCCGCCCTACAAGAGAGCGCGGT
CAACGTGGAGAAATGGAAAGAACAACTGAATAATTATAAAGAAGACAACC
AAAGACTCAGAAAAAAGCTGGCGGCCAGTGCTGGTTCTGGCGGTGCTAAA
TCAAATTCGACGGAAGTATCCGATTTAGAAAAACGGGTTTCGGAATtaga
aaataaactaaaacggAAAGAAGAGGAGTTATCTCGCATAACGCAGCACA
GTACGGATGAATTACATGTGTTACGGGAAAAGAATGCGCAGTTATCTAAA
AAACTTAAAACACACGAAGATAAATTATCAGATGACGTAAACAACAATCG
CAAACAAAACGAAGAAATACGAAACTACGAAGGCAAATTGAAACAATTCA
GCGAAACAAGTCATGAAATGGAGTCGAAGTTACGAGAACTTTTTACGCTA
CAACAAAAAATGAATGGTTTGATGAAAAGTTGAAATTCTTTGTGAGTTTC
TCATTCACTCTCTTCTCTGTTTATGTTTCACTTCATGTTTCAGATGTGTT
CAGCTAGATAATTCATGATAaacatgacgtaatgttttctattaTTTTGG
TAGTAGTGGCATTTCCGCTACTTGCCAAAACCGGGGTGGTTCCGTAGAAA
GgattacgtaatgaatatcaTTCCATGAATAAGAGAGGACCTGTTTAGCC
CCAGTTTTTCTGttcaattttaatattttctcaaatttgtcGATTTCAGG
CAAATCTTTAGATTATAAAACTATGAGGGGACTAGAAACGAAGGACAGAC
AATCTTTCCAACACATAACAGTGTATAAATGAttcttctttttaaagaaa
gttcAATTTATCCACTTTTTAAGTATGTAATGAAAATATATTATATAGTA
TTTTACCATAGTAGAGTTAGACCAAAAAAATAGTGTACCATAGTCTCAAA
AGAAATTGTATATAATTAAaatatgttatatcataaactCAAAGTGTGTA
TTATTGTTTTAGTGTTCTAGCTTTGCCGAGATCagataatttttgtttta
catTTAAACTTAGCAAATTTTAACTTTGTCTGCTAATATCTACGTCATTT
TACTTGAACAAGTTTGCCCTACAATTTTCAAAGCTGTATGAAAACGaatg
taatttttctttaatgcactctttgttgttttgtCTTCCGCTgagatgaa
atttgaaatttctctaaaatctcagctggcacacaacgttgtttcaacgt
tcatctaatattcataacgtccatataacgttgaaTGAACGTTGAAAA
Run BLAST on NCBI

transcript from alignment at sc0000084:339162..347243-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008319 ID=TCONS_00008319|Name=TCONS_00008319|organism=Clytia hemisphaerica|type=transcript|length=8082bp|location=Sequence derived from alignment at sc0000084:339162..347243- (Clytia hemisphaerica)
AAACCAACTCTGGAAAGAACTCGTGTTAGAAAGAGCTCAGCTCCAGATGA
TGTACGTATCCGAAGGATTTCTGCACCGGTACAACAAGCGGGTGCTATGG
ATAACGGAAAGGCCCGTAGTTCACGCCGCGTAAGAAGTAAAACATACGAT
GGTAATCAGGTAATGTTATCCTCATTTATCGATGTAACAATCAAAAGTTT
GGCTCCCTTTGCCTTACAATGTTTTATAAAGTTCTCGAGTCGCAGCCAAA
TTCGAAACTCGAAACCCGAAAAAAAATCTCAAACTCGTGAAAAATTAGAC
GCTATTTCGTTGCAGAAAATTATTTTTATGTTTAGATTGAGAATTTTACT
ATTTGGCCAGTGGAGTAAGGGGTATTTCATCCTTTTTTTCGAAAGTTCAA
CTTATTTCATCTCGATCGCATTTTGTTTAAGATTTGCTACCCCACACCAA
ACCCCTTTGGGAATAAATGTCATAATTGCAACAATTACCAATTACTAAAT
TAATCTTTATTCTGCCTACTGAATGACGTCATTGTACTTGAGGCTTGGGA
GCCCTTCATTGTTTTCCTTTCCGTCAAGCGTGTAGGAGTTTGAGAGAAGA
TAACCATCAAAACAATGTCATGATACAGGTGCAATTAAAGATTCCCTAGT
GGCTTTTGCGTGCTTTTATAAGAATAATTATGAGGAGATTATACAAAAGT
ATACTTTGTATTTTGCCCAGTAAATCTGACATTGTGTTGCTTTCAAAAGC
TACACGCTTTTTCTTGAAAGAACAATTAAGTTTTAGCTAAGCCCTGGCTG
TTCTTGGTGTTCCATGATTTTCAAACTTGAATGTTAAATGTCAAATGTTC
TTATAGTGTTCTTACTATATATATGTACTTTGTTAATAATTTAGGACTTA
GCTTTTTCAGAGTTGTTTCTTCGGGAGTCCTTGCCAGTGTCTATTGCATG
CACAGTTTCGTTTTTTATTCGAACACTATTTCCTGATGTCAGCTTTTAAA
GATTTTTCTTAAAAAAAGTGAACTTTATGAAAATTATTGTGTGTGTGGGT
AGAAAGAAAAATATGACGATTACCGTGTAACGTATTTGATTACTTTTGAG
AATACTGTCCAATTTGGATGCGATTTGGTTTCTTATTATAAGAAACTCTA
TGTTATACTTCTGTTTTTTTTTGTTTTTGTTTTTTGACTGTGAATTATGC
ACAAAATTTTGAGGTCAAGTCAATGTATTTGAGTTCAGATCAGTTCAGAT
TCAAGATTGTGAGTTATTTGAGTGTTTGGTCCAATCCTCCCAATGTTGAA
TGGCGTACATGTTTAACTGATTCTTTTTAAAGGTTTTTTTCTTACATATA
GGTGTTTCCGTTTCATATCAGACACGTATTTCATATCAGGACAGTGTCTT
GCTATTGTTATATTATGCTGATGTAAGCAAACTTTCTGGCCAATCTTGCT
CCACATCCGTGTCAATCCAATGTGAAAAAGCTTGTGAATTAAAATTTTTC
TCTTTTCTAAAAGCAAAACCTTTAACCGTTAATGTACCAGTTATTTTGCA
CTACTTAAACCTCCAAATGATTAGTTCATGCGAATCCCTGTTATAAAAAA
GCAGCTGAGATAATACAGTCTAGGAGTCTCTATTGCTTGAAAAGACAAGG
GGGACTGAAATTTCTTTGAATCATGGAAATTTCGATTTATTGTGATTGTT
TCATAAGGAATTGAGGGACTGTAGTAGCCTAGTTAACTAAGCCCGTATTC
ACAAGGCTAGGACACACGGCTTATGGCAATATAGCGTTTTCGGCGCTTTA
AAGATTTTATATATTTACAGATTTTAAGTTTGCCTTGGAATACTGCGTTA
TTCAGTCACAACTTAACCATCAGATTTATCCAAGTGACTGAATCAAACTA
GCTTAGATTTCTAGGCTAGGACTGTAGGGACGAGAAAGCTTGTTCAAATT
TGAAGATTCTACTGTAATAAAAATTAATAGTAAGCATTTAATAAACCAAA
AAATGTTCTTATATGGAAAGTGAAATACCTCTGCTAATACGACATCAATT
AAAAAAAAATAAACTGTTTGAAAAATATATATATAATATGTAAGAGAATA
GTATCTATCAATGAAAAGGGATATAGAACACAAATCACATTTCTATCATC
AAATAGACATAGCTGTGTCGTTTAGCAAGACTGTCTCTAATACAGTTAGT
TGAAAAAAAGATCTTTGATCTTAGTGGAAATTTTTGAATTTGTTTTTTGT
GGTTTTATTTGAGTATTTTTGTTGGTAAGATGAAAGATAAAAGCTTTCTT
GCACTTCCACGGGTAAGGTTCTTGAATTTCTCTCCATGCGTTTCATTTAG
GGTTCTCTGTCATTCTAAGTTTAGCTCTTTCCATTGCCAAGATTCGTAGA
AGGCGATTAGTGGAGAGAGAGTTGACCTCGCTACGTGTTCAATTTTCATT
GGATTCTTACCCAAAACCTTCCGGTCAGTAGACAATCACAATAATCATTT
GATCACGTTCTTAATGTCGGATTTGTATACATTGCTGGGGACAATTTCAA
TCAATGTAGTTTTTTGGACCCAGTATAATTTTCCCGAAAACTTGTTCACT
AAACTAAACTAAGCTTGGGAAAGGTTGAAGATGCAACTCTAGCCGTTTCG
GGCTTCAAACTCAATGTTTGTAATCGGTAACAAATAAAACAAAATTTCGA
CCCTATGCAACCACTTTCCCAATTTCTACAGACTTTTGTTTGCATTCTGA
TTGGATCTTTTCGAAGATGCTGTGTTGGTTGAAAAAACTGTGTAAAGAAG
ATCTCGGGTTGGTTTTGTATGTGTATTGAAGTGAAGGGTTGAAAGCGAAT
CTAGATTTTCTACAAAACGGTCAACATTTTACCATCACCCGGCAACGTAT
TAGCCAAATATTTGAATGTTGAGAGGTTAAAAAAACTTATGTTATTTGAG
AGTGTGTTTGTGATATCACCTCACCTAAGAAATGATCGCAATTTTGGTTA
TAATAAAGCACTGTTGTTTGCTTTCAAGATCTGAGGACAACATTTGTAGG
GAAAATGGTATATTTGTTAAACATTTTTCATGTCCTTTTTCTATGTTTGT
TTCAATTTCGTTTGAAGACACTGTAAGTTGCATAGCTAGAAGTGCAATGG
AATGAAGGGAAGCGCAAACGATGTAGTATATATCCTGCACTGACACAGCT
CCATTATTACCTTCTCTCTATGTACAGGTCGATTTGNGTAATTTCTCCTT
TGCATAGTTCGATCATTACTTTGGCTCTACGTACAGGTCGATTTCTAACC
ATTTTTTCGCTTTCATTATGTACAGGAGGAGACGCAATCACCTGGTAGTC
ATCGCTCGTCATCAAGCTCAAGCGAAAGTCAAATCAAATACGAAAATGAT
CGATTGAAAAAAGCGCTTGCTCAAAGGTAACATCTCTTCCCCTTCTTCAT
AATCGCCGAGCAGAATCTAATACTCTGCGCATGATACGCATTCACTCTAA
AGGCCATGGATCCGTAAGAGAAACTGCCTAGGTTGGCGAACCGCTTGAAT
CCTTTTCATACAGTGTTGGGATGAATTTTTGGATTCTAAAAAGTAGGTGG
TGCTGAGCTGATGAGAGATTTCAGGTGGGGTAATCCTATGCAGGCGAGGA
TGACCTTTTTCAGGTGTGGGTTTAGAGGTCTTGTCTACTAATAATAGCTC
TGATTTTCTGATTTCATAAGACTTCAGCCTGAAATTCAAGGGACCAGTAA
TCAAAATCTTTGAATATAAATAAAGTAGTTAGTATACCTTAATGTGGAAA
ATTTGTGAGCCAAGAAGCGATTGAAAATATGCGGTGAAATAGAAGAATAT
CTTTTGTTTTACAGCTCATCGAATGCAAAGAAGTGGGAAACTGAATTTCA
AACATTGAAAAACAATAACGCCCGCTTGACGGCCGCCCTACAAGAGAGCG
CGGTCAACGTGGAGAAATGGAAAGAACAACTGAATAATTATAAAGAAGAC
AACCAAAGACTCAGAAAAAAGGTAAAGGACGATTGACTTGCCAATCGGTT
GGAGGATATTGTACTCAGCTTGGTCATTTCTATTTTATGTTAAGAAGTTT
AGATAACAGTTTTAACTCAAAAGACACATCATTACATACTGTGTGCCCCT
TGTTTTGATGAGAGCCCCATCGCAAAGGAGGACTGAAGCAAAAATTTTAC
CTGCTTTTATCTGTGGACTGAGAGATTTTGGACATGATGAATGGGAGAGC
TCGTAGTTTTAATATTTCGGGAGTTTTTAAGATACAAACTAAACCGAAAA
TGAAGTTCTTTATGAATCTTGCTCTCCAATCCTCAAAAGCCAAGTCTTTT
CTATTCAGTGTTAAATTTGACTTGATTTTTTGGACCTACCTCCGGGTACC
CCGGTGGAGGTTCTATAAATTAACCCATGTCCGTTCGTTCGTCTGTTCGT
TCGTCCGTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAG
TTTTTTCTGATTTTTTGCACAATGATGCAAAACGGCAATGCCCAGAACGT
GACGGAGCCCGATTTTTGAGAAAAAATTTATTTGGGCGAATTTGAGCCAA
AAACTACCTAAAATTAGGGTTTTTTAGACTTTGTGCAAAATCCTGTCATT
ACTTTTTTCTGATTTTTTGTACAAAGATGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAACGGATTT
TCGTATTTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTT
CTCAATGTTGACTCGTTATTTTTTTCTGATTTTTTGCACAACGACGCAAA
ATGGCAATGCCTAAAATGTGTCGGAGCCTGATTTTCGAAAAAAAATATAT
TTGGGCAAATTTGGGCAAAAAACTGCCTAAAAATAAGGTTTTTTGGACTT
TGGTCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAAGATGGA
GGGCAAGATTCTCTAAAGAATGGCTGAAGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCT
TTAACCAAATATGAAAATATAGCTTTTCTCAATGTTGACTCATAATTTTT
TTCTGATTTTTTGCACAATGATGCAAAATGGCAATTCCCAAAATGTGAAG
GAGGCAGATTTTTAAGGAAATTTTTTTTGGGCAAATTTGGGCCAAAAACA
GCTTAAAAGGTTTAAGTGATTTTCGTATTTGGGGAAATTCCTTTATACCA
TTTTACATTATTCAACACACAAGCTTTATTTTTCTATTCTGAATTTTTGT
ACATATATTGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGT
AGGTCCATTCAGCATGTTGCTTGTTTTCATTTCAGCTGGCGGCCAGTGCT
GGTTCTGGCGGTGCTAAATCAAATTCGACGGAAGTATCCGATTTAGAAAA
ACGGGTTTCGGAATTAGAAAATAAACTAAAACGGAAAGAAGAGGTTTGTC
TCTTTTCCCTTTGATATTCCAGCAAGTTATTTGATTTTAGTTGTAAAGAG
TTCAACGATTTGCATTCGCATTGTACTTGTTTTTCCCCATAAGTATAACG
TTAAGCATATACAGGCTCAGTTTTTGGTACCTAAACAATGGCTGACCCTG
ACTCAAATAAAGATTTTTACCTCAAATTTAATTTCCCCTAAGCATTAACG
TGTATTTGCCACGCCTGAGTTTCGTAATTAATTCGTTTGTACTTTTTCAC
GCGTAGCGTCAAAAATATTTATTTATTGCCATGCGTAGACACTTGCTTAT
TTAAAAAAAACATGCTCTCTCAAGTTCTTTAACGGTTTAAAATCATTTTC
ATCTCAACCGGTGTGACCGAACTGACTGAGTGGCGTTGTGCCGAAATACT
TGACAAAACGCCGTGACAAAAGCGGAAACCATCGTGGAGACAGTTTAGTG
AGTGTTTGCTCGTTGGAGGTGTCCGCCTTTCGGATGTTTTACTGTATTTA
TTTTCTTCCAATTTTAGGAGTTATCTCGCATAACGCAGCACAGTACGGAT
GAATTACATGTGTTACGGGAAAAGAATGCGCAGTTATCTAAAAAACTTAA
AGTAAGTGTTTTTTTCTTACATGCTATCTGCGTTATATATCTGGGAATGA
AAACGGTCAGTGGAAATCCGTAACATGATTGGTAGATTAAGTTAATTGGA
TTTTTTTGGCGTGGGTTTAATTTGGCGATTGAACAAAATGAGATTTTAGG
TGGGAATCCAATTTGGCGAATGATCAATTTTCTAGAATTTGGTTGGTATT
TCACTACTACCAAAATTAATCCAGGGTATATACCAATATGGTATATATAA
TATATAATTTCGAACACACTTATCAATAAAACCAAAGCAATTAAAAGTTA
AGAAGTTTGCAGAAGAAGATACATACGTTAGTCAAGATAACCTCATTTTT
CAATGAGGCCATTATGGAAGCAAACATTCGATTCTGTAAAGACGATCGCT
TACGCAAATCGAACGTTTACTTCCATAATGGTGGAAGTTATGAGTGATAG
TTAAATAATCTATAAGGCCTGGCCGTTTGACTGAAGTCCCAAGAAGATGA
TTGAAAACAGTCTGAAAATCCTGGATTACTAGGCTCTCCATGTAAAATAT
CGAATCTATCTGAATTTCAAGGAGATTTGTTTTCACCTTTCAGACACACG
AAGATAAATTATCAGATGACGTAAACAACAATCGCAAACAAAACGAAGAA
ATACGAAACTACGAAGGCAAATTGAAACAATTCAGCGAAACAAGTCATGA
AATGGAGTCGAAGTTACGAGAACTTTTTACGCTACAACAAAAAATGAATG
GTTTGATGAAAAGTTGAAATTCTTTGTGAGTTTCTCATTCACTCTCTTCT
CTGTTTATGTTTCACTTCATGTTTCAGATGTGTTCAGCTAGATAATTCAT
GATAAACATGACGTAATGTTTTCTATTATTTTGGTAGTAGTGGCATTTCC
GCTACTTGCCAAAACCGGGGTGGTTCCGTAGAAAGGATTACGTAATGAAT
ATCATTCCATGAATAAGAGAGGACCTGTTTAGCCCCAGTTTTTCTGTTCA
ATTTTAATATTTTCTCAAATTTGTCGATTTCAGGCAAATCTTTAGATTAT
AAAACTATGAGGGGACTAGAAACGAAGGACAGACAATCTTTCCAACACAT
AACAGTGTATAAATGATTCTTCTTTTTAAAGAAAGTTCAATTTATCCACT
TTTTAAGTATGTAATGAAAATATATTATATAGTATTTTACCATAGTAGAG
TTAGACCAAAAAAATAGTGTACCATAGTCTCAAAAGAAATTGTATATAAT
TAAAATATGTTATATCATAAACTCAAAGTGTGTATTATTGTTTTAGTGTT
CTAGCTTTGCCGAGATCAGATAATTTTTGTTTTACATTTAAACTTAGCAA
ATTTTAACTTTGTCTGCTAATATCTACGTCATTTTACTTGAACAAGTTTG
CCCTACAATTTTCAAAGCTGTATGAAAACGAATGTAATTTTTCTTTAATG
CACTCTTTGTTGTTTTGTCTTCCGCTGAGATGAAATTTGAAATTTCTCTA
AAATCTCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAATATTCATA
ACGTCCATATAACGTTGAATGAACGTTGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004671XLOC_004671Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008319-exon-sc0000084-1575043694:347085..347243TCONS_00008319-exon-sc0000084-1575043694:347085..347243Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1575043694:343818..343918TCONS_00008319-exon-sc0000084-1575043694:343818..343918Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1575043694:343223..343379TCONS_00008319-exon-sc0000084-1575043694:343223..343379Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1575043694:341351..341458TCONS_00008319-exon-sc0000084-1575043694:341351..341458Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1575043694:340743..340826TCONS_00008319-exon-sc0000084-1575043694:340743..340826Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1575043694:339162..340150TCONS_00008319-exon-sc0000084-1575043694:339162..340150Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1510915933:347085..347243TCONS_00008319-exon-sc0000084-1510915933:347085..347243Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1510915933:343818..343918TCONS_00008319-exon-sc0000084-1510915933:343818..343918Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1510915933:343223..343379TCONS_00008319-exon-sc0000084-1510915933:343223..343379Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1510915933:341351..341458TCONS_00008319-exon-sc0000084-1510915933:341351..341458Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1510915933:340743..340826TCONS_00008319-exon-sc0000084-1510915933:340743..340826Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1510915933:339162..340150TCONS_00008319-exon-sc0000084-1510915933:339162..340150Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1491911889:347085..347243TCONS_00008319-exon-sc0000084-1491911889:347085..347243Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1491911889:343818..343918TCONS_00008319-exon-sc0000084-1491911889:343818..343918Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1491911889:343223..343379TCONS_00008319-exon-sc0000084-1491911889:343223..343379Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1491911889:341351..341458TCONS_00008319-exon-sc0000084-1491911889:341351..341458Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1491911889:340743..340826TCONS_00008319-exon-sc0000084-1491911889:340743..340826Clytia hemisphaericaexon
TCONS_00008319-exon-sc0000084-1491911889:339162..340150TCONS_00008319-exon-sc0000084-1491911889:339162..340150Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:339162..347243 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.379912	14.3079	7.13193	3.04059	2.1846	0.6796	12.8068	5.64472	12.3331	1.06913	1.23968	0.411018	1.09105	0.68891	0.252172	3.74813	0.833367	0.000145175	0.972526	0.000233681	0.262527	0.200163	0.838352	0	0	0	0.0995483
Blast
[Close]
BLAST of TCONS_00008319 vs. Swiss-Prot (Human)
Match: HOME2 (Homer protein homolog 2 OS=Homo sapiens GN=HOMER2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.182e-17
Identity = 39/65 (60.00%), Postives = 51/65 (78.46%), Query Frame = 1 
Query:  217 IKYENDRLKKALAQSSSNAKKWETEFQTLKNNNARLTAALQESAVNVEKWKEQLNNYKEDNQRLR 411
            +K END+LK AL QS++N KKWE E QTL+ +NARLT ALQESA +VE+WK Q +  +++N RLR
Sbjct:  162 LKSENDKLKIALTQSAANVKKWEIELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLR 226
The following BLAST results are available for this feature:
BLAST of TCONS_00008319 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HOME25.182e-1760.00Homer protein homolog 2 OS=Homo sapiens GN=HOMER2 ... [more]
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