TCONS_00008298 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008298
Unique NameTCONS_00008298
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2681

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008298 ID=TCONS_00008298|Name=TCONS_00008298|organism=Clytia hemisphaerica|type=transcript|length=2681bp
ATTTTTTTGTCTACGTAACTACTTTCAAGTTTTCAAGTCAAGATATGACA
ATTTGAAATCTCTGAAACATCGTCTATACCGAGCAATAGTCTACCTCACT
TGAGTCGAAGTGCAAGGTCACAGAAAACAAGTAAAGCTTCACTGTCGGTC
AGTGGAAGGAACATGTTGTCATCAAGCAAAAGTATTGACGTCTCAACCGT
TGAAAATGAATACATTCGAAACCTTCAACAACAAGTTTATTTCTTGGAGT
TAGAATGTGATTATTTACGTGGACAAGCTAACAGAGTGCAGGAAATACCC
AATGATATCACCTTAGAAGCTGGCAAACTCGTCAAACGACTAAAGATAGC
ACAAAAAGAAATTCGGGATCGCGATTCAGAGATTCTAAAGCGTGACGACA
ATATCAATTTACTGCAACATGAATGCGAAAATCTTACATCCAAGATATCG
ATACTTGAAGATTCATTCGCAGCAGAGAAGAAAGAACTTATTAACGAAGT
CGTCTCGCTAAAGAAAGAACTCGAACGTAAAGAGCTCGATCAAGCTCGTA
AAATCaatgaaaacgaaaaaatcaaacttgactACGATACTACGATCGTA
GACTTGAAAGAATCGACAAGCAAGATCAACGTCACATTAGCACAACTTCA
CGAGAAAACAGACGAATATAACAAACTTCGCGTTCTATACGAAGAACAGC
GCGCCGAATGCTTAAAAATACAGACTGAGTACCAAGAGCTCGAAGAACGA
TTCTTCAATTCCAAGGCTAAATCAATGGAAGATGTTGGACGCAGTCTAAA
GGaagaaatgaagacattgcgTTTTGATCTTcgtgaaaaagaaatcaaag
tggAACAAGAAAGGACACTAAGACTAAAGATGTCGGATGATTGTGCCGCT
TTGGTGAAAGAAAATGCCACTCTGGCTTCACAATGCAGTGAGCTACAAAA
ACATCTCGACATTGAACGAGATTACAAACATGACAAATCATTACGTAATC
AAACAAATATTCAAGAACTCGTCACGTTGAAAGAAGAACGAAAACATTTG
GAAAGGGATCTGGACCGAGCCAATCAGCTGTTAGAAATCGAAAAGAATAA
ATATACAAGACTCCTTGATCGATTCACGAATGAAGAAGAAAGACATACCA
GAGccaaactacacaGTTCGAAGCTGAAAGCAGAGCTTGAAGAATTAGAA
GGCTTGGAAACagttggtacaaaagaaaatATCGCCTTACGACGTGATAA
AGTTTTAATGAGTGATGAAATCGCCTCACTGCAATCAAAGTTGGAGGATA
AGAACGATCACGTGAGAACCTTACAAAACAAATTATCCAATTTAAACGTC
GCATATGATGAACTAGATCATAAACACAAAACAGAATTCAATCTCAATTC
AATCCGTTGGGATGAGTTTGAAAAAATGGCGGACCAGATGAAATCGTTCA
CTCGGTCCATGTCTCCTATTCGACAAAGTCTTTCCAATACTTCTCTGGGA
AGAAGAATTCAGGAACTCGATCTAGATCAAGACACCTAACCTGCTGGACA
CTGGACTGAAGATTTGTTAGGATTGTCGGATATGACCTATATCATCTCAA
CACTTCTTTGGTTGCTAGTTGGAGCATTATATCAAGAAACTTAGCTTAGC
CTGGATACTAGTTGAAGGCTTGTCTGTAAGCCTGTTGACCTTTATATCCT
TCAATAATTGTTCATTTAAATctcttcaacttttttcatatttatattat
tttatgaaaaactCAGGAACTGAAGCTGAATAAAGAAAGCTAGCTTAGAC
TCATTAGACTAGTTTAATAGTCTTATGTGTGGTAATATGAAATTATGTCA
GACGTATGCGTGATAAATTAGGGAAAGATTTTAGGTTCCATAGTTCATCG
GGAAATCTTTAATGTTTCGATACCTTatgtggataaattttcgcgtggat
taattttcgcggttttcgcgaattttggccatttttgcgaaatttaatcc
acgcgaaatctttaaatcctcgtctcgcgaaaattagtacacgcgaaaag
ttatccacttaaggtacgcTGGAGAGAAAGACTTCAaattaagaaaaagt
ttctgattgtacacctctgtgtcacagacccactgggatcccaggcccac
tggaaaatttggcaaaaatttcgtccccggtgggaaaatacactggaatt
tcagccccactgggaaattgactttgatttcatccccattcgattCCATG
CTCAAAAGTTTCACTACAAACCAATCCCACTGgatgtttcattttttaac
tttggaacaatagagtttTTATacccattggaatttcaataggaattttt
atccttactgaggaaaaaagttccaccgggcctgtgagacaggggtgtga
ttgTGTAGATATTTGAATTAACGAAGAAAAATCAATCCATCATTGATTAA
TTTattgtattcaatttttaagTAGTGTGTAataaattgtaaatattata
tcaagaatattttttacctttaaaatatttgtttgaAAATAGTGAGTAGT
TAGGACGTGATTTCAGAATTTTATTGATGGCTTCACTTAAGTTAGTATGC
CTAAGCCAGACGGCTCAATTTTGGTCAGAACCTAAGATTAAACTTAAATT
TAGattaattgaaattaaaaacaatcTCAGC
Run BLAST on NCBI

transcript from alignment at sc0000084:603912..615399+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008298 ID=TCONS_00008298|Name=TCONS_00008298|organism=Clytia hemisphaerica|type=transcript|length=11488bp|location=Sequence derived from alignment at sc0000084:603912..615399+ (Clytia hemisphaerica)
ATTTTTTTGTCTACGTAACTACTTTCAAGTTTTCAAGTCAAGATATGACA
ATTTGAAATCTCTGAAAGTGagttcttacaatgttcttacgtcaaaattc
cattgttttcttgctaaaagtaaaaatattgacTTTCAGCTATTTATCAT
GCATAAACCATGCCTTGGCCACTCTTGATAAAGTTTACTCCCTCCTTCTT
TCCCTGGTAAAGGGCTTGGAAATTTCCCAATTGAACGGGATTGATATTTT
AACTAGCTTTTACTCAAGATAATTAGATAATTCTGCAATTTGAGGGGTTT
GTAAAAGGTTGGATAAAAACCTCTTCCACCTGGGCTACTAAATATTTTCC
TTCATTTAGATCGTAAAACTCCTACTTACCGGTCTATGTATAGGCTACTC
CTGCGtctaaaaaagttgattttaccTTGGTTTTCATTTCAGCATCGTCT
ATACCGAGCAATAGTCTACCTCACTTGAGTCGAAGTGCAAGGTCACAGAA
AACAAGTAAAGCTTCACTGTCGGTCAGTGGAAGGAACATGTTGTCATCAA
GCAAAAGGtatgattttttatgatttttactGCTGCATTATAAGTTTGGC
TGGGTGGGATATTTTTGAGTAGCCGCCGTTCGAATTGAGAGACGGCGACA
AATTGAAGAAAAGTCGGGACTTCTAATCTTTGTAGGAAATAATTCATTTT
GTTATGTCGATCATCGACTTTCTAcagttttttgtcgaaaataaagaaaa
aattcaaccgTGTCAAGTAGAGTCATGGGAGATTAGACTAATAGTAATAA
TCTTTTCCGACGCACGATAACATGATAACAATAATTCTCCTTCCCATTGT
TTTTGGTATAGCTGACTTCAATAAGATCGAAAAAGGTGTGCCTAGCAGTA
AATCCCAGATACAATTCTAGTCACATTTTAAGCATTTATAAGTTAGAATT
TTCTGTTCTAGTATTGACGTCTCAACCGTTGAAAATGAATACATTCGAAA
CCTTCAANGTATTTTAGTATTGACGTCTCAACCGTTGAAAATGAATACAT
TCGAAACCTTCAACAACAAGTTTATTTCTTGGAGTTAGAATGTGATTATT
TACGTGGACAAGCTAACAGAGTGCAGGAAATACCCAATGATATCACCTTA
GAAGCTGGCAAACTCGTCAAACGACTAAAGGTATATTACTTAGGAGATAA
GTATGTTATAGTTGTGAGACTATGTAGATGATTTTTACTCTtgatattct
ttttatttttaatatacacttttttataaaaacacgaagctgaaaataaa
gtaaagtaaagaaactaagcgtataaagaacatcgtaagaacacttttaa
gcgaccgtagtgcagtgctATAGCACATCCGACTACGGTGCgaaaggttg
tgggttcaacccaatgaagtagaagccgaaggctagaagtcaatctcttt
ggtaggatttaaagccaacaaatcctaccaaagttgcgcggccttgagcg
gttcgcctggtttttacacaaatgacagactgaaactaaaatttaccgct
aaatttcaaaaaaaatatcaatcgtaaacaaaggaatttctagattcaat
ctgtcgtcaaaaatacggcgcattttttaaggcttcactttttcttgcct
gagaaaggtcagagattgaactctagcccttcgggctttaaactcaatgg
ttcaaCCTCTAGATGGGTCATAcaaaagattcccaaaatggtgcctctct
gcttgatgaaGAGcgaagagaaggatcaagggtaagtgaagcaatccagg
gagaaaaaaGTGGCGCCCtaccctaccttcgggtagatagctgtcgcctc
cgactgcgctcgcagacttacttacgtAAGAACATctaagcctgaaaatt
tcaaaaagataagaacagccaagcctgagccaaaatttaccggttcttat
aaaaaaaagcgtgtactttttaaactttcttctTACTTTCATTCAGATAG
CACAAAAAGAAATTCGGGATCGCGATTCAGAGATTCTAAAGCGTGACGAC
AATATCAATTTACTGCAACATGAATGCGAAAATCTTACATCCAAGATATC
GATACTTGAAGGTAACCTTCCTTTGTTTTAACAATGTCCCTCATTTTGAC
TTTCAAATGGAATGTGGATGGGACACCATGAACTCATTGACAGAATTTAC
TCTCAAGTGCCTAATAGTTCCCCTGCCGCTTTTTAATTCTTGACACCCTC
TCTCATTATTCCGACCACCCTGTTTATGTTTAGGCAACTGAGGGTATAAA
AAATGTAGCTTTCGGGTTCAAAAATTTGTGCCGGTTTTACCAAGGAGAAT
GTAATAAATTGTAAAATAGTTCTTGGTGCTGAATTGAAGAGAAGTGAGAA
GTGTTCTTTAGATAGCTTACAAATGAAAGCTTTCTAGCTGATTTCAACAC
GGTTGCATTTGCCTGCTGAAAACTTTATCTTATTTGAGTTTTCTAAAGTA
GATTTTTCTTTACCATAACATTTAAGAGGGATTTCGATAGCCTAGGCTGC
TCTCTTGTGATGGGGGGAAAGTAGGGAGGCAAGTATAACTGATTGATATC
AGATTTCTTCACTTAGAGTGACCAGAGATGGAAAAGTTCACCCTTCCCAT
GTAGTCAAGATGTCAAGATTAGACCTAGGCTAACTTAGCATGTTTTATTT
TCTTACAGATTCATTCGCAGCAGAGAAGAAAGAACTTATTAACGAAGTCG
TCTCGCTAAAGAAAGAACTCGAACGTAAAGAGCTCGATCAAGCTCGTAAA
ATCaatgaaaacgaaaaaatcaaacttgactACGATACTACGATCGTAGA
CTTGAAAGAATCGACAAGCAAGATCAACGTCACATTAGCACAAGTAAGTC
TTACATGAATTTTTTATACTAGACTTCGAATCAGTGTTTTCAGTACGAGT
TGTACTTTCtgtagaagttttttttgctataagaacaaattatgtaagta
aggtTTTgctgtcaaaaaataagaacatttcaagaccATTTTAAAACTAT
AGAACGATTCATTTTCTTGAGAAGTTGTTGCAAGGaactaaaaatagaaa
cttCTTAGAAAGAACATCCGTCATCTCTTGCTCATCACCAGGAAACTTGA
GGATGGAAGTAAGGTCTAGTTGAAATATATAATTtagtaaaaatctttaa
atttaacCACCCAGCCATTAGAATGATTTGAagcgcttatcaaataaaag
ttaaaccacGATTTAACCTTTGTTAAATCCAAAGACACAGTAAAATGGGT
TTCGGATTTATTATGTGACCGAAAAAGAGGCTCAAAAAGGTTCAGATTCT
GTACTTATTTTTAATCGTTCATCTCCTTATTTTCTGATAGCTTCACGAGA
AAACAGACGAATATAACAAACTTCGCGTTCTATACGAAGAACAGCGCGCC
GAATGCTTAAAAATACAGACTGAGTACCAAGAGCTCGAAGAACGATTCTT
CAATTCCAAGGCTAAATCAATGGAAGATGTTGGACGCAGTCTAAAGgtaa
gattttgtttttttcgtgATGGAATATTATGGGAGTGTGAATCTTCGGTA
GAAATGATTTTAAGTTGAAACTTTACTCAagcaaaaaacaaataaagCGC
TAGAtatattcatagaattatatttcacaggtctatcgacctctacgaaa
taattttagatttatgaaatattgtctaattcttcatctgtcgtccagtc
gtcagaagatattgacagagaagacgttgttttggtctttgtcctagaTT
TTATTCATTTGATGCCGCTAAAATCTTTTGGAAAAGTTAGAGAGTCCTCT
TTAGCCAATCATTCTGTTCTTCTACATAAATTTAGTATATTACCTCCTCA
TTAACCTCTTTGTTCTTTATACACAGGaagaaatgaagacattgcgTTTT
GATCTTcgtgaaaaagaaatcaaagtggAACAAGAAAGGACACTAAGACT
AAAGGTAACTCAAGTCTTGGAGAGTGTTATGATATCATTTATACAAGTTC
TCCCAAAAGGTGAATGGCTCCTACTCCTTACTACGAAGTAGATATTCCAC
CTTCATTCAAATAGGAACGCGGCACACAGTTACCATGCTGCATTGTGATG
AAACTTGAACAACGCGGGAAAGAAGAGCTCGTTGTGAGTGTAGAAGGGTA
TAAGTATTATCAACCATAATCAATCAACCATTTCAGTTATGATGACTGGC
AtatcacccacactcttgtattaGAGTTACGGTACCCATCTCCCCATTTA
CCAAGTGAACCGTAGTATCACACTGGGAATCGAACCTCCTAACACAAtta
ccactataccacaacaAGACTGTAATTTCTAagttctttttgaaaataag
caGTGGTAGAATTTGTGACAAACGATTGTAATTACCCTTCACTCTTCATT
GCTGCTTTAAAATCTGCCCGAACATTTCCACCCTTGGCGGCATTAGCTCC
CAAATTTACACTCTTTTCAGGGCCTTAGTCTAGACAATAGGATCGTTTAA
ATTTGATTAGGAAATTCACAAAATCCCATAAAACCAACTTAGAGGTATAG
ATGGAGAATCTCTTGAAAGGACACTTTTTGATATTGGAACTCTTCCATTT
CAGATGTCGGATGATTGTGCCGCTTTGGTGAAAGAAAATGCCACTCTGGC
TTCACAATGCAGTGAGCTACAAAAACATCTCGACATTGTAAGTTGGATTT
GTCTCCAGTAcactactcttaggttccaaataaattgGAGttggttcgaa
taaacggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAGCAAAATaagggccttctctttgacagctgaaaatattctt
aaaaattaataaacggggggggtcctaataaggtccggggggttggaaaa
ttttcgcaaaattaaCAACTgcggggggcgtttatttgaaacctAAGAAT
ATTCGTTTTTTAATTGGGAGATCGTGGAAAGccaaacatttttttccaaa
aagataTTATCCTATTTGCCCTCTCTTTTCAAGTAATATCCCAGCTACCC
TCTATCCTCAAGTAAACTAATCAATGTTCTTCAAACCAAAATGTCTTGAT
AATCCCGATCCCAAATACTTCGACAATTTAAaggtcattcattcattcat
taatCGCCATAGGAACGAGATTACAAACATGACAAATCATTACGTAATCA
AACAAATATTCAAGAACTCGTCACGTTGAAAGAAGAACGAAAACATTTGG
AAAGGGATCTGGACCGAGCCAATCAGCTGTTAGAAATCGAAAAGAATAAA
TATACAAGACTCCTTGATCGAGTAAGTTAACTGACCGTCATATTAGCACC
CTGTTATAAGAATAATTTGTGATGGTGACATTATAGTGACCAAAAAAAGC
CTGTTGTGAAGAacaataagaaaaatgaaaataatgtcAAAAAGGCTGGA
ATCGTTTATAATCCATGTAATACATGTTATATGATAGTATGATAGTAGTA
atgggataatatcagtttgtacAGCAATTTGTcccttcaaatttttttca
catattTTCCGCTTTTTCTGAATTAGCCATTTATCCATGCTAGACTAAAT
GCTCAGGCAAAGCACATTTTTGTTAAGTTTTCATCTTTCAGGAGCGTATT
TTATTTTCGAATATCGTCGTTGAATACTTTAGTTATTTTTTACTACACGA
TCAGTAGAAATCAGTTTAGGCTCAGTTTAGTTTTTCTTGTGGGGTTTATT
TAAAAAGGTCACTTCCTCTTTTACACAACGGAAGTTGAAGGAAGAATTAT
ACTTAAAAGTTTTCATCTCCCATAGTTCACGAATGAAGAAGAAAGACATA
CCAGAGGTTAGTTGGGATATTCATTCATTCACCGCGTGTCCGAATTGTCC
GAAAAAGGGATAGTTTTCCTTTTCTCCCaacttctttcattttcttaaag
gttttagtCAAAATTCGGATGTGGAATTTTTCGCGGGAACGGGTAGACCT
cgtgaaaattgtgaaaattaatccacctAAGGAAGTTCTATTGTTTTTCC
GTAATAAAAAATTCCAATCGCATTTTGCAAATAATGAAATAGGGAGGGTG
ACACTCAACTGCATGTGCTTGGTTCAAAAGTAGATAGGAGAGGGGGCCCG
CGGATTAGGCttggcaaaagtttttatggtcGAAAAACTGATGTTTTAGG
CAAAATTCCTAACACCCAAAATAGACGAatatttgacaaattttcaaaaa
tgaattaaaagaaaattatcaTTACCAACGAATAGAGCAtcaaattttga
gcaaaaaagtatactacaacatctacgggaccttgaaaaccctTGAAATT
GGACTaagcaaccttgaaaaccttgaaagtgAATGTAATGGGAAAGAATT
CcttgaaaaccttaaaaatgcATGATTGTGGCAGTATAGTTGTCTTGTTT
TGGCTTGGGTCCTTACTGAAGTTTTGGTCTACGCTAAAGTTCCAAAAAAT
TTCTTGCTCGCTTTCCTCGCAATCATTGTTTCTGGACCAAATAATGGTAG
TAACCTCCATGCACCTTGTCGACACAGTCATATCCTACTACtattttaag
tcaattttagttctgaaaaccttgaaaatacccaataaatggtccaaaaa
aacttgaaaaacactaaaattttgccaaaaaaaccttgaaaatgggGAAA
AAAATTCCGTAGACACCTTGCAAGTCTTATACTcaaaaatgtaaagaaat
acatgctttcaaagttcaaaattcTGTCAGATGGAgtacgattgacgtca
aattttgtctaaaatgtAACGGATTCCACAggattttaaactttaaaatt
gtcatcatcatcatcattgctcgaccgcagtcgagacaaTGGATTCCACT
CGCTGGCGCCAGGAGTCGCGGTTGCGCATAGCAGTGCCCAGGTCGCTAAG
ATCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTAGGTA
GGCCTCGTCAAGTTTAATCTTGGCAGAGTTAAGTTGCTCCTTGCGTCTCC
GCGTTGGTGCTGCATTATACAAAGAGGAAGCTTTTGTTAGATTTGGATTT
TTCCAATAAATTGTCATATTTTAGTGTGTTTGAGTATAAGACTTGttgta
gtatacttttttgctcagaatttcatccTTCATCCGATGATAATCATTTG
TGTTGTTCgacaaaaaattgtcaattttttactcattttgggGGTTAGGA
GTTTTTCCTACAACGTTAAATTTTTGGCCATGGCCTAATTCGCGGGCCCC
CTCTCAAAGTTTCAAAATCCTATCTACTTTCGAACCACGAAAGAAGTTAT
AGAACCTAAGGattgcccccccccctactATCATACCTTTCAATTTtgtt
atttcagccaaactacacaGTTCGAAGCTGAAAGCAGAGCTTGAAGAATT
AGAAGGCTTGGAAACagttggtacaaaagaaaatATCGCCTTACGACGTG
ATAAAGTTTTAATGAGTGATGAAATCGCCTCACTGCAATCAAAGGTATGG
ATTAAGTTTGACGTTCTTCTTCTAAAGTTCGTGCTATGAGGGGGCAGTAG
ATACTACACCTCGACATATCGCTTTCTACCATAAACAATTCTTGGTTCAG
GGGAAACCAACCGGGTcaactattttctttttcttcaagttATACccaga
aacaaaatttttatcCTAGCCTAAACTTTCCGAATAGGTCGACAATTACC
TAAAAATCAACCATAAGTTTCCTAGCTTGATGAGTGTTCCGGAAAAATCA
CTTCTCGATTAGATTCAAGGGAAATATTCTCACAAAGTTCGCGCTAAAGT
TAGACTAGAAAACCAcctcgttgtatttcgctgcagcttACGCTTGCAAT
GGGCTCACTACGTACGCTGAATAAACCACTTTACCACGGCAATttctata
ttttataagaactcgttataagcactattcccgcgttcctgtgtccaagg
aaagacaaacgcttgctagtctactctcgggtacctaatagccgtccccc
cccgcttattaatttttggaaaaatgtttttaaaagttccctcttttgtc
ctaattcagctgtattagcctccttttcaaaaattttccacccgggacat
ttttattccaaccccccccccccccgctcNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNcccccccccccctgcttattccaaaccccccggctattaggtac
ccgagagtaagcaAAAGTTGGTTCTGCGGATAAAAAAAGTTTCCGCGAAA
GTTAGTTTTCTTACGGTATTCATTGACCATTCGCTTTGTCTCAACAGTTG
GAGGATAAGAACGATCACGTGAGAACCTTACAAAACAAATTATCCAATTT
AAACGTCGCATATGATGAACTAGATCATAAACACAAAACAGAATTCAATC
TCAATTCAATCCGTTGGGATGAGTTTGAAAAAATGGCGGACCAGATGAAA
TCGTTCACTCGGTCCATGTCTCCTATTCGACAAAGTCTTTCCAATACTTC
TCTGGGAAGAAGAATTCAGGAACTCGATCTAGATCAAGACACCTAACCTG
CTGGACACTGGACTGAAGATTTGTTAGGATTGTCGGATATGACCTATATC
ATCTCAACACTTCTTTGGTTGCTAGTTGGAGCATTATATCAAGAAACTTA
GCTTAGCCTGGATACTAGTTGAAGGCTTGTCTGTAAGCCTGTTGACCTTT
ATATCCTTCAATAATTGTTCATTTAAATctcttcaacttttttcatattt
atattattttatgaaaaactCAGGAACTGAAGCTGAATAAAGAAAGCTAG
CTTAGACTCATTAGACTAGTTTAATAGTCTTATGTGTGGTAATATGAAAT
TATGTCAGACGTATGCGTGATAAATTAGGGAAAGATTTTAGGTTCCATAG
TTCATCGGGAAATCTTTAATGTTTCGATACCTTatgtggataaattttcg
cgtggattaattttcgcggttttcgcgaattttggccatttttgcgaaat
ttaatccacgcgaaatctttaaatcctcgtctcgcgaaaattagtacacg
cgaaaagttatccacttaaggtacgcTGGAGAGAAAGACTTCAaattaag
aaaaagtttctgattgtacacctctgtgtcacagacccactgggatccca
ggcccactggaaaatttggcaaaaatttcgtccccggtgggaaaatacac
tggaatttcagccccactgggaaattgactttgatttcatccccattcga
ttCCATGCTCAAAAGTTTCACTACAAACCAATCCCACTGgatgtttcatt
ttttaactttggaacaatagagtttTTATacccattggaatttcaatagg
aatttttatccttactgaggaaaaaagttccaccgggcctgtgagacagg
ggtgtgattgTGTAGATATTTGAATTAACGAAGAAAAATCAATCCATCAT
TGATTAATTTattgtattcaatttttaagTAGTGTGTAataaattgtaaa
tattatatcaagaatattttttacctttaaaatatttgtttgaAAATAGT
GAGTAGTTAGGACGTGATTTCAGAATTTTATTGATGGCTTCACTTAAGTT
AGTATGCCTAAGCCAGACGGCTCAATTTTGGTCAGAACCTAAGATTAAAC
TTAAATTTAGattaattgaaattaaaaacaatcTCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004660XLOC_004660Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008298-exon-sc0000084-1491911889:603912..603978TCONS_00008298-exon-sc0000084-1491911889:603912..603978Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:603912..603978TCONS_00008298-exon-sc0000084-1510915933:603912..603978Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:603912..603978TCONS_00008298-exon-sc0000084-1575043694:603912..603978Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:604354..604468TCONS_00008298-exon-sc0000084-1491911889:604354..604468Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:604354..604468TCONS_00008298-exon-sc0000084-1510915933:604354..604468Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:604354..604468TCONS_00008298-exon-sc0000084-1575043694:604354..604468Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:604873..604903TCONS_00008298-exon-sc0000084-1491911889:604873..604903Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:604873..604903TCONS_00008298-exon-sc0000084-1510915933:604873..604903Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:604873..604903TCONS_00008298-exon-sc0000084-1575043694:604873..604903Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:604960..605091TCONS_00008298-exon-sc0000084-1491911889:604960..605091Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:604960..605091TCONS_00008298-exon-sc0000084-1510915933:604960..605091Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:604960..605091TCONS_00008298-exon-sc0000084-1575043694:604960..605091Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:605908..606022TCONS_00008298-exon-sc0000084-1491911889:605908..606022Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:605908..606022TCONS_00008298-exon-sc0000084-1510915933:605908..606022Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:605908..606022TCONS_00008298-exon-sc0000084-1575043694:605908..606022Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:606620..606804TCONS_00008298-exon-sc0000084-1491911889:606620..606804Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:606620..606804TCONS_00008298-exon-sc0000084-1510915933:606620..606804Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:606620..606804TCONS_00008298-exon-sc0000084-1575043694:606620..606804Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:607302..607457TCONS_00008298-exon-sc0000084-1491911889:607302..607457Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:607302..607457TCONS_00008298-exon-sc0000084-1510915933:607302..607457Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:607302..607457TCONS_00008298-exon-sc0000084-1575043694:607302..607457Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:607838..607915TCONS_00008298-exon-sc0000084-1491911889:607838..607915Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:607838..607915TCONS_00008298-exon-sc0000084-1510915933:607838..607915Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:607838..607915TCONS_00008298-exon-sc0000084-1575043694:607838..607915Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:608565..608648TCONS_00008298-exon-sc0000084-1491911889:608565..608648Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:608565..608648TCONS_00008298-exon-sc0000084-1510915933:608565..608648Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:608565..608648TCONS_00008298-exon-sc0000084-1575043694:608565..608648Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:609274..609432TCONS_00008298-exon-sc0000084-1491911889:609274..609432Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:609274..609432TCONS_00008298-exon-sc0000084-1510915933:609274..609432Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:609274..609432TCONS_00008298-exon-sc0000084-1575043694:609274..609432Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:609937..609967TCONS_00008298-exon-sc0000084-1491911889:609937..609967Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:609937..609967TCONS_00008298-exon-sc0000084-1510915933:609937..609967Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:609937..609967TCONS_00008298-exon-sc0000084-1575043694:609937..609967Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:612669..612805TCONS_00008298-exon-sc0000084-1491911889:612669..612805Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:612669..612805TCONS_00008298-exon-sc0000084-1510915933:612669..612805Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:612669..612805TCONS_00008298-exon-sc0000084-1575043694:612669..612805Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1491911889:614009..615399TCONS_00008298-exon-sc0000084-1491911889:614009..615399Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1510915933:614009..615399TCONS_00008298-exon-sc0000084-1510915933:614009..615399Clytia hemisphaericaexon
TCONS_00008298-exon-sc0000084-1575043694:614009..615399TCONS_00008298-exon-sc0000084-1575043694:614009..615399Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:603912..615399 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.10725e-06	0	0	0	0.000252078	1.65835e-05	0.000335641	0.000188805	0.611808	0	2.45528	1.06774	0.365392	0	3.40401e-05	2.34153e-05	0	0	0	0	0	0	0	0	0.00685212	1.891e-08	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008298 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top