TCONS_00008294 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008294
Unique NameTCONS_00008294
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2896

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008294 ID=TCONS_00008294|Name=TCONS_00008294|organism=Clytia hemisphaerica|type=transcript|length=2896bp
tttataagaatggtgtaaatccatttcatcatggatattattaacttttt
tgggaaaatcatcctaaaatattcttacagcattcttaggttaggatcct
aattgactaaaaaattgtctaaaaatggcattcttagcttgagtagcaaa
attctatgatggtgatattcttagcatattcttcattttttggccatttt
catcatggacattcttataaagTGtattcttataaaaaaaagcgtgtagc
tcATTACACAGTGACTATACTTGGGCAATCTGCATCGTCTATACCGAGCA
ATAGTCTACCTCACTTGAGTCGAAGTGCAAGGTCACAGAAAACAAGTAAA
GCTTCACTGTCGGTCAGTGGAAGGAACATGTTGTCATCAAGCAAAAGTAT
TGACGTCTCAACCGTTGAAAATGAATACATTCGAAACCTTCAACAACAAG
TTTATTTCTTGGAGTTAGAATGTGATTATTTACGTGGACAAGCTAACAGA
GTGCAGGAAATACCCAATGATATCACCTTAGAAGCTGGCAAACTCGTCAA
ACGACTAAAGATAGCACAAAAAGAAATTCGGGATCGCGATTCAGAGATTC
TAAAGCGTGACGACAATATCAATTTACTGCAACATGAATGCGAAAATCTT
ACATCCAAGATATCGATACTTGAAGATTCATTCGCAGCAGAGAAGAAAGA
ACTTATTAACGAAGTCGTCTCGCTAAAGAAAGAACTCGAACGTAAAGAGC
TCGATCAAGCTCGTAAAATCaatgaaaacgaaaaaatcaaacttgactAC
GATACTACGATCGTAGACTTGAAAGAATCGACAAGCAAGATCAACGTCAC
ATTAGCACAACTTCACGAGAAAACAGACGAATATAACAAACTTCGCGTTC
TATACGAAGAACAGCGCGCCGAATGCTTAAAAATACAGACTGAGTACCAA
GAGCTCGAAGAACGATTCTTCAATTCCAAGGCTAAATCAATGGAAGATGT
TGGACGCAGTCTAAAGGaagaaatgaagacattgcgTTTTGATCTTcgtg
aaaaagaaatcaaagtggAACAAGAAAGGACACTAAGACTAAAGATGTCG
GATGATTGTGCCGCTTTGGTGAAAGAAAATGCCACTCTGGCTTCACAATG
CAGTGAGCTACAAAAACATCTCGACATTGAACGAGATTACAAACATGACA
AATCATTACGTAATCAAACAAATATTCAAGAACTCGTCACGTTGAAAGAA
GAACGAAAACATTTGGAAAGGGATCTGGACCGAGCCAATCAGCTGTTAGA
AATCGAAAAGAATAAATATACAAGACTCCTTGATCGATTCACGAATGAAG
AAGAAAGACATACCAGAGccaaactacacaGTTCGAAGCTGAAAGCAGAG
CTTGAAGAATTAGAAGGCTTGGAAACagttggtacaaaagaaaatATCGC
CTTACGACGTGATAAAGTTTTAATGAGTGATGAAATCGCCTCACTGCAAT
CAAAGTTGGAGGATAAGAACGATCACGTGAGAACCTTACAAAACAAATTA
TCCAATTTAAACGTCGCATATGATGAACTAGATCATAAACACAAAACAGA
ATTCAATCTCAATTCAATCCGTTGGGATGAGTTTGAAAAAATGGCGGACC
AGATGAAATCGTTCACTCGGTCCATGTCTCCTATTCGACAAAGTCTTTCC
AATACTTCTCTGGGAAGAAGAATTCAGGAACTCGATCTAGATCAAGACAC
CTAACCTGCTGGACACTGGACTGAAGATTTGTTAGGATTGTCGGATATGA
CCTATATCATCTCAACACTTCTTTGGTTGCTAGTTGGAGCATTATATCAA
GAAACTTAGCTTAGCCTGGATACTAGTTGAAGGCTTGTCTGTAAGCCTGT
TGACCTTTATATCCTTCAATAATTGTTCATTTAAATctcttcaacttttt
tcatatttatattattttatgaaaaactCAGGAACTGAAGCTGAATAAAG
AAAGCTAGCTTAGACTCATTAGACTAGTTTAATAGTCTTATGTGTGGTAA
TATGAAATTATGTCAGACGTATGCGTGATAAATTAGGGAAAGATTTTAGG
TTCCATAGTTCATCGGGAAATCTTTAATGTTTCGATACCTTatgtggata
aattttcgcgtggattaattttcgcggttttcgcgaattttggccatttt
tgcgaaatttaatccacgcgaaatctttaaatcctcgtctcgcgaaaatt
agtacacgcgaaaagttatccacttaaggtacgcTGGAGAGAAAGACTTC
Aaattaagaaaaagtttctgattgtacacctctgtgtcacagacccactg
ggatcccaggcccactggaaaatttggcaaaaatttcgtccccggtggga
aaatacactggaatttcagccccactgggaaattgactttgatttcatcc
ccattcgattCCATGCTCAAAAGTTTCACTACAAACCAATCCCACTGgat
gtttcattttttaactttggaacaatagagtttTTATacccattggaatt
tcaataggaatttttatccttactgaggaaaaaagttccaccgggcctgt
gagacaggggtgtgattgTGTAGATATTTGAATTAACGAAGAAAAATCAA
TCCATCATTGATTAATTTattgtattcaatttttaagTAGTGTGTAataa
attgtaaatattatatcaagaatattttttacctttaaaatatttgtttg
aAAATAGTGAGTAGTTAGGACGTGATTTCAGAATTTTATTGATGGCTTCA
CTTAAGTTAGTATGCCTAAGCCAGACGGCTCAATTTTGGTCAGAACCTAA
GATTAAACTTAAATTTAGattaattgaaattaaaaacaatcTCAGC
Run BLAST on NCBI

transcript from alignment at sc0000084:601382..615399+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008294 ID=TCONS_00008294|Name=TCONS_00008294|organism=Clytia hemisphaerica|type=transcript|length=14018bp|location=Sequence derived from alignment at sc0000084:601382..615399+ (Clytia hemisphaerica)
tttataagaatggtgtaaatccatttcatcatggatattattaacttttt
tgggaaaatcatcctaaaatattcttacagcattcttaggttaggatcct
aattgactaaaaaattgtctaaaaatggcattcttagcttgagtagcaaa
attctatgatggtgatattcttagcatattcttcattttttggccatttt
catcatggacattcttataaagTGtattcttataaaaaaaagcgtgtagc
tcATTACACAGTGACTATACTTGGGCAATCTGGTAAGTATATTTATTCTA
GCTACTGTATTTGACATTtataatttacaaaaatatttattcaaaattta
gattttcatttattttattcgTTTCATTGGACCTTCATTGCACTCACGCA
CGTTCGTGCTCAGGCTCTCTGGCTGGTTTAgtcctttttcttttcattgg
cCTTGCCTTGTTTTCTTTTAGCTCAATTCAGCTCATTTTTCATTTGCAtg
gttgttttggagaacgcggcggcctattgaataactaattactcctgatt
actccacaacagttacctagagacaaaataatttatcacgtttttattgg
ctgagggaaagtaatttatgtggagtaatttgttattcaataggccgTCG
CATTCTCCAAAACAGCTATTTGCATGTTCGTACCCAGGTTTCATGGTCTT
ATCACCTGTGCACTCATTTCGTCCTCATTTTCATTCGCATGTTCGTGCTC
AGGCTTCTTGGTGGACTGACCTTGTTCATGTTTCGtgctttttttgtttg
attattagtcattttttcattaattagacattttttcactaattttaTTA
ATTAGTCATTTTTTCACTTATTAGTCATTTTTTCACTGATTGGTCACTTT
CCTAGTTTTCAttgtaaatttttctaaattattcaACTTTGTATTCATTT
AAGTTTGAACACCACTCCAACATATCACAAATTCATTAGTGTTACAAACT
CCTCTAGCAGTCCTGCCCTGCTACATACCTTCACCTTTTTGGTCAACTTT
TATTTTGGAGGGAGGGGGGGCGTCTGCCCTATATGCCTCTCCCCTTTGGA
TGCGCAACTGGCTGCTggatatgaattttttttgagaccCCCCTAAGggt
agaaaaaaatcttgaCACCCCTCCCCTAGAATCCTCCATCCCCCCTAAGA
TACTTTTGACCACTCCCTTATGCCAttaatttgaataaatattgTCGTTT
TATAACGAAAATAACAACTAAATGATTGATGAAGCTCGTTCatttagaaa
cattttaaaCCTTTAAAAATCTAACAAATCTTTGTACAGGTAAGTTTCAG
TAACAAattaaatcaaaagattttaaatATGTTGAGAATATGAatgtaat
ttcttaatttttgatattataacTTGTTTCATGAACCCTTCTTTAGAAAA
ACGgattaaaaattgaaactttttatttgatttattcaTGAAGCCATCTT
GATATTTCTTGTTCTCTATTATCTCTTGCTcataaaaatttaagatttca
tgttgaaaaattttcattcaaaaagatatcAGATTGTCAGGATAGTTTTA
GTGCATAGTAAAGTTTTTCATCTAATGATTTCCTGTTTTATGAGAATGAT
AATTGCATCAAAATGCACTATTTGGAACGTACAGTATTAAAGATTGATAA
TTGTTTTTTGCAAGGAAGTCCTTTAGTTCCTAATTTAAACTTTTATTAAA
GTGTCTTGGAAAGAAGTTTTGGAATTTGCAAAAGGATAAATgacttcttt
ttcatttgagttggaTTTATGATTTCTAGATTTGATATTAAAGGAGCAAA
TAAAACATTTGTTACTGGAGTaattatttttgtcaataaaaataATGAAC
AAAAAGAGAGCGAAAAAGGTCCATTTTCACTCACCACGATTTGAAGGTTA
CCAAAATTTGGGCACCTTAGAACAGGGTAAATTTTTGCTAATTAGGCAAT
ATATAACATAATAAGCCTTAACTTGTGAACGAGCATAAATTAGTAATAAT
ACATGATTATGGATTTATACATGATTATGGAtttaaataaatattaaaaa
tagatattctGTATATCTTTTTCTTCTGTCTTTCTTCTTTTGGTGTCGTT
CCAATCTCAGAGCATTTTAAACTTTCACAAACAGCTTGAATCTTTGACCG
CCATAATGGGCGATCCATTGCAATAACAGTCCAATCGAGTAAATTGATTT
TCTTAGGCAAATAGTGCCCGTTTTAATATTATATTATGATGCTGTTGTtt
agagtttttctttttttttgagcaATTCCAAATANCATATTATGATGCTG
TTGTTTAGAGTCTAGTGTTTTTGAGCAATTCCAAATATACACCTGTTTTT
AAACCTAAAAGCTAAGAGATGATTTGATGATCATGTTAATAGTAGGGTTG
AGTGGCGTAAAATATTACATCTTTGATGGTCTAAATCTTTAACCTGCACA
TTCTTTTCATAGTCCTGAGTAAATCCTCCAATTTTTTTGTCTACGTAACT
ACTTTCAAGTTTTCAAGTCAAGATATGACAATTTGAAATCTCTGAAAGTG
agttcttacaatgttcttacgtcaaaattccattgttttcttgctaaaag
taaaaatattgacTTTCAGCTATTTATCATGCATAAACCATGCCTTGGCC
ACTCTTGATAAAGTTTACTCCCTCCTTCTTTCCCTGGTAAAGGGCTTGGA
AATTTCCCAATTGAACGGGATTGATATTTTAACTAGCTTTTACTCAAGAT
AATTAGATAATTCTGCAATTTGAGGGGTTTGTAAAAGGTTGGATAAAAAC
CTCTTCCACCTGGGCTACTAAATATTTTCCTTCATTTAGATCGTAAAACT
CCTACTTACCGGTCTATGTATAGGCTACTCCTGCGtctaaaaaagttgat
tttaccTTGGTTTTCATTTCAGCATCGTCTATACCGAGCAATAGTCTACC
TCACTTGAGTCGAAGTGCAAGGTCACAGAAAACAAGTAAAGCTTCACTGT
CGGTCAGTGGAAGGAACATGTTGTCATCAAGCAAAAGGtatgatttttta
tgatttttactGCTGCATTATAAGTTTGGCTGGGTGGGATATTTTTGAGT
AGCCGCCGTTCGAATTGAGAGACGGCGACAAATTGAAGAAAAGTCGGGAC
TTCTAATCTTTGTAGGAAATAATTCATTTTGTTATGTCGATCATCGACTT
TCTAcagttttttgtcgaaaataaagaaaaaattcaaccgTGTCAAGTAG
AGTCATGGGAGATTAGACTAATAGTAATAATCTTTTCCGACGCACGATAA
CATGATAACAATAATTCTCCTTCCCATTGTTTTTGGTATAGCTGACTTCA
ATAAGATCGAAAAAGGTGTGCCTAGCAGTAAATCCCAGATACAATTCTAG
TCACATTTTAAGCATTTATAAGTTAGAATTTTCTGTTCTAGTATTGACGT
CTCAACCGTTGAAAATGAATACATTCGAAACCTTCAANGTATTTTAGTAT
TGACGTCTCAACCGTTGAAAATGAATACATTCGAAACCTTCAACAACAAG
TTTATTTCTTGGAGTTAGAATGTGATTATTTACGTGGACAAGCTAACAGA
GTGCAGGAAATACCCAATGATATCACCTTAGAAGCTGGCAAACTCGTCAA
ACGACTAAAGGTATATTACTTAGGAGATAAGTATGTTATAGTTGTGAGAC
TATGTAGATGATTTTTACTCTtgatattctttttatttttaatatacact
tttttataaaaacacgaagctgaaaataaagtaaagtaaagaaactaagc
gtataaagaacatcgtaagaacacttttaagcgaccgtagtgcagtgctA
TAGCACATCCGACTACGGTGCgaaaggttgtgggttcaacccaatgaagt
agaagccgaaggctagaagtcaatctctttggtaggatttaaagccaaca
aatcctaccaaagttgcgcggccttgagcggttcgcctggtttttacaca
aatgacagactgaaactaaaatttaccgctaaatttcaaaaaaaatatca
atcgtaaacaaaggaatttctagattcaatctgtcgtcaaaaatacggcg
cattttttaaggcttcactttttcttgcctgagaaaggtcagagattgaa
ctctagcccttcgggctttaaactcaatggttcaaCCTCTAGATGGGTCA
TAcaaaagattcccaaaatggtgcctctctgcttgatgaaGAGcgaagag
aaggatcaagggtaagtgaagcaatccagggagaaaaaaGTGGCGCCCta
ccctaccttcgggtagatagctgtcgcctccgactgcgctcgcagactta
cttacgtAAGAACATctaagcctgaaaatttcaaaaagataagaacagcc
aagcctgagccaaaatttaccggttcttataaaaaaaagcgtgtactttt
taaactttcttctTACTTTCATTCAGATAGCACAAAAAGAAATTCGGGAT
CGCGATTCAGAGATTCTAAAGCGTGACGACAATATCAATTTACTGCAACA
TGAATGCGAAAATCTTACATCCAAGATATCGATACTTGAAGGTAACCTTC
CTTTGTTTTAACAATGTCCCTCATTTTGACTTTCAAATGGAATGTGGATG
GGACACCATGAACTCATTGACAGAATTTACTCTCAAGTGCCTAATAGTTC
CCCTGCCGCTTTTTAATTCTTGACACCCTCTCTCATTATTCCGACCACCC
TGTTTATGTTTAGGCAACTGAGGGTATAAAAAATGTAGCTTTCGGGTTCA
AAAATTTGTGCCGGTTTTACCAAGGAGAATGTAATAAATTGTAAAATAGT
TCTTGGTGCTGAATTGAAGAGAAGTGAGAAGTGTTCTTTAGATAGCTTAC
AAATGAAAGCTTTCTAGCTGATTTCAACACGGTTGCATTTGCCTGCTGAA
AACTTTATCTTATTTGAGTTTTCTAAAGTAGATTTTTCTTTACCATAACA
TTTAAGAGGGATTTCGATAGCCTAGGCTGCTCTCTTGTGATGGGGGGAAA
GTAGGGAGGCAAGTATAACTGATTGATATCAGATTTCTTCACTTAGAGTG
ACCAGAGATGGAAAAGTTCACCCTTCCCATGTAGTCAAGATGTCAAGATT
AGACCTAGGCTAACTTAGCATGTTTTATTTTCTTACAGATTCATTCGCAG
CAGAGAAGAAAGAACTTATTAACGAAGTCGTCTCGCTAAAGAAAGAACTC
GAACGTAAAGAGCTCGATCAAGCTCGTAAAATCaatgaaaacgaaaaaat
caaacttgactACGATACTACGATCGTAGACTTGAAAGAATCGACAAGCA
AGATCAACGTCACATTAGCACAAGTAAGTCTTACATGAATTTTTTATACT
AGACTTCGAATCAGTGTTTTCAGTACGAGTTGTACTTTCtgtagaagttt
tttttgctataagaacaaattatgtaagtaaggtTTTgctgtcaaaaaat
aagaacatttcaagaccATTTTAAAACTATAGAACGATTCATTTTCTTGA
GAAGTTGTTGCAAGGaactaaaaatagaaacttCTTAGAAAGAACATCCG
TCATCTCTTGCTCATCACCAGGAAACTTGAGGATGGAAGTAAGGTCTAGT
TGAAATATATAATTtagtaaaaatctttaaatttaacCACCCAGCCATTA
GAATGATTTGAagcgcttatcaaataaaagttaaaccacGATTTAACCTT
TGTTAAATCCAAAGACACAGTAAAATGGGTTTCGGATTTATTATGTGACC
GAAAAAGAGGCTCAAAAAGGTTCAGATTCTGTACTTATTTTTAATCGTTC
ATCTCCTTATTTTCTGATAGCTTCACGAGAAAACAGACGAATATAACAAA
CTTCGCGTTCTATACGAAGAACAGCGCGCCGAATGCTTAAAAATACAGAC
TGAGTACCAAGAGCTCGAAGAACGATTCTTCAATTCCAAGGCTAAATCAA
TGGAAGATGTTGGACGCAGTCTAAAGgtaagattttgtttttttcgtgAT
GGAATATTATGGGAGTGTGAATCTTCGGTAGAAATGATTTTAAGTTGAAA
CTTTACTCAagcaaaaaacaaataaagCGCTAGAtatattcatagaatta
tatttcacaggtctatcgacctctacgaaataattttagatttatgaaat
attgtctaattcttcatctgtcgtccagtcgtcagaagatattgacagag
aagacgttgttttggtctttgtcctagaTTTTATTCATTTGATGCCGCTA
AAATCTTTTGGAAAAGTTAGAGAGTCCTCTTTAGCCAATCATTCTGTTCT
TCTACATAAATTTAGTATATTACCTCCTCATTAACCTCTTTGTTCTTTAT
ACACAGGaagaaatgaagacattgcgTTTTGATCTTcgtgaaaaagaaat
caaagtggAACAAGAAAGGACACTAAGACTAAAGGTAACTCAAGTCTTGG
AGAGTGTTATGATATCATTTATACAAGTTCTCCCAAAAGGTGAATGGCTC
CTACTCCTTACTACGAAGTAGATATTCCACCTTCATTCAAATAGGAACGC
GGCACACAGTTACCATGCTGCATTGTGATGAAACTTGAACAACGCGGGAA
AGAAGAGCTCGTTGTGAGTGTAGAAGGGTATAAGTATTATCAACCATAAT
CAATCAACCATTTCAGTTATGATGACTGGCAtatcacccacactcttgta
ttaGAGTTACGGTACCCATCTCCCCATTTACCAAGTGAACCGTAGTATCA
CACTGGGAATCGAACCTCCTAACACAAttaccactataccacaacaAGAC
TGTAATTTCTAagttctttttgaaaataagcaGTGGTAGAATTTGTGACA
AACGATTGTAATTACCCTTCACTCTTCATTGCTGCTTTAAAATCTGCCCG
AACATTTCCACCCTTGGCGGCATTAGCTCCCAAATTTACACTCTTTTCAG
GGCCTTAGTCTAGACAATAGGATCGTTTAAATTTGATTAGGAAATTCACA
AAATCCCATAAAACCAACTTAGAGGTATAGATGGAGAATCTCTTGAAAGG
ACACTTTTTGATATTGGAACTCTTCCATTTCAGATGTCGGATGATTGTGC
CGCTTTGGTGAAAGAAAATGCCACTCTGGCTTCACAATGCAGTGAGCTAC
AAAAACATCTCGACATTGTAAGTTGGATTTGTCTCCAGTAcactactctt
aggttccaaataaattgGAGttggttcgaataaacggggggggggggNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAAAATaagg
gccttctctttgacagctgaaaatattcttaaaaattaataaacgggggg
ggtcctaataaggtccggggggttggaaaattttcgcaaaattaaCAACT
gcggggggcgtttatttgaaacctAAGAATATTCGTTTTTTAATTGGGAG
ATCGTGGAAAGccaaacatttttttccaaaaagataTTATCCTATTTGCC
CTCTCTTTTCAAGTAATATCCCAGCTACCCTCTATCCTCAAGTAAACTAA
TCAATGTTCTTCAAACCAAAATGTCTTGATAATCCCGATCCCAAATACTT
CGACAATTTAAaggtcattcattcattcattaatCGCCATAGGAACGAGA
TTACAAACATGACAAATCATTACGTAATCAAACAAATATTCAAGAACTCG
TCACGTTGAAAGAAGAACGAAAACATTTGGAAAGGGATCTGGACCGAGCC
AATCAGCTGTTAGAAATCGAAAAGAATAAATATACAAGACTCCTTGATCG
AGTAAGTTAACTGACCGTCATATTAGCACCCTGTTATAAGAATAATTTGT
GATGGTGACATTATAGTGACCAAAAAAAGCCTGTTGTGAAGAacaataag
aaaaatgaaaataatgtcAAAAAGGCTGGAATCGTTTATAATCCATGTAA
TACATGTTATATGATAGTATGATAGTAGTAatgggataatatcagtttgt
acAGCAATTTGTcccttcaaatttttttcacatattTTCCGCTTTTTCTG
AATTAGCCATTTATCCATGCTAGACTAAATGCTCAGGCAAAGCACATTTT
TGTTAAGTTTTCATCTTTCAGGAGCGTATTTTATTTTCGAATATCGTCGT
TGAATACTTTAGTTATTTTTTACTACACGATCAGTAGAAATCAGTTTAGG
CTCAGTTTAGTTTTTCTTGTGGGGTTTATTTAAAAAGGTCACTTCCTCTT
TTACACAACGGAAGTTGAAGGAAGAATTATACTTAAAAGTTTTCATCTCC
CATAGTTCACGAATGAAGAAGAAAGACATACCAGAGGTTAGTTGGGATAT
TCATTCATTCACCGCGTGTCCGAATTGTCCGAAAAAGGGATAGTTTTCCT
TTTCTCCCaacttctttcattttcttaaaggttttagtCAAAATTCGGAT
GTGGAATTTTTCGCGGGAACGGGTAGACCTcgtgaaaattgtgaaaatta
atccacctAAGGAAGTTCTATTGTTTTTCCGTAATAAAAAATTCCAATCG
CATTTTGCAAATAATGAAATAGGGAGGGTGACACTCAACTGCATGTGCTT
GGTTCAAAAGTAGATAGGAGAGGGGGCCCGCGGATTAGGCttggcaaaag
tttttatggtcGAAAAACTGATGTTTTAGGCAAAATTCCTAACACCCAAA
ATAGACGAatatttgacaaattttcaaaaatgaattaaaagaaaattatc
aTTACCAACGAATAGAGCAtcaaattttgagcaaaaaagtatactacaac
atctacgggaccttgaaaaccctTGAAATTGGACTaagcaaccttgaaaa
ccttgaaagtgAATGTAATGGGAAAGAATTCcttgaaaaccttaaaaatg
cATGATTGTGGCAGTATAGTTGTCTTGTTTTGGCTTGGGTCCTTACTGAA
GTTTTGGTCTACGCTAAAGTTCCAAAAAATTTCTTGCTCGCTTTCCTCGC
AATCATTGTTTCTGGACCAAATAATGGTAGTAACCTCCATGCACCTTGTC
GACACAGTCATATCCTACTACtattttaagtcaattttagttctgaaaac
cttgaaaatacccaataaatggtccaaaaaaacttgaaaaacactaaaat
tttgccaaaaaaaccttgaaaatgggGAAAAAAATTCCGTAGACACCTTG
CAAGTCTTATACTcaaaaatgtaaagaaatacatgctttcaaagttcaaa
attcTGTCAGATGGAgtacgattgacgtcaaattttgtctaaaatgtAAC
GGATTCCACAggattttaaactttaaaattgtcatcatcatcatcattgc
tcgaccgcagtcgagacaaTGGATTCCACTCGCTGGCGCCAGGAGTCGCG
GTTGCGCATAGCAGTGCCCAGGTCGCTAAGATCAAGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCTCTAGGTAGGCCTCGTCAAGTTTAATCT
TGGCAGAGTTAAGTTGCTCCTTGCGTCTCCGCGTTGGTGCTGCATTATAC
AAAGAGGAAGCTTTTGTTAGATTTGGATTTTTCCAATAAATTGTCATATT
TTAGTGTGTTTGAGTATAAGACTTGttgtagtatacttttttgctcagaa
tttcatccTTCATCCGATGATAATCATTTGTGTTGTTCgacaaaaaattg
tcaattttttactcattttgggGGTTAGGAGTTTTTCCTACAACGTTAAA
TTTTTGGCCATGGCCTAATTCGCGGGCCCCCTCTCAAAGTTTCAAAATCC
TATCTACTTTCGAACCACGAAAGAAGTTATAGAACCTAAGGattgccccc
ccccctactATCATACCTTTCAATTTtgttatttcagccaaactacacaG
TTCGAAGCTGAAAGCAGAGCTTGAAGAATTAGAAGGCTTGGAAACagttg
gtacaaaagaaaatATCGCCTTACGACGTGATAAAGTTTTAATGAGTGAT
GAAATCGCCTCACTGCAATCAAAGGTATGGATTAAGTTTGACGTTCTTCT
TCTAAAGTTCGTGCTATGAGGGGGCAGTAGATACTACACCTCGACATATC
GCTTTCTACCATAAACAATTCTTGGTTCAGGGGAAACCAACCGGGTcaac
tattttctttttcttcaagttATACccagaaacaaaatttttatcCTAGC
CTAAACTTTCCGAATAGGTCGACAATTACCTAAAAATCAACCATAAGTTT
CCTAGCTTGATGAGTGTTCCGGAAAAATCACTTCTCGATTAGATTCAAGG
GAAATATTCTCACAAAGTTCGCGCTAAAGTTAGACTAGAAAACCAcctcg
ttgtatttcgctgcagcttACGCTTGCAATGGGCTCACTACGTACGCTGA
ATAAACCACTTTACCACGGCAATttctatattttataagaactcgttata
agcactattcccgcgttcctgtgtccaaggaaagacaaacgcttgctagt
ctactctcgggtacctaatagccgtccccccccgcttattaatttttgga
aaaatgtttttaaaagttccctcttttgtcctaattcagctgtattagcc
tccttttcaaaaattttccacccgggacatttttattccaaccccccccc
cccccgctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccctg
cttattccaaaccccccggctattaggtacccgagagtaagcaAAAGTTG
GTTCTGCGGATAAAAAAAGTTTCCGCGAAAGTTAGTTTTCTTACGGTATT
CATTGACCATTCGCTTTGTCTCAACAGTTGGAGGATAAGAACGATCACGT
GAGAACCTTACAAAACAAATTATCCAATTTAAACGTCGCATATGATGAAC
TAGATCATAAACACAAAACAGAATTCAATCTCAATTCAATCCGTTGGGAT
GAGTTTGAAAAAATGGCGGACCAGATGAAATCGTTCACTCGGTCCATGTC
TCCTATTCGACAAAGTCTTTCCAATACTTCTCTGGGAAGAAGAATTCAGG
AACTCGATCTAGATCAAGACACCTAACCTGCTGGACACTGGACTGAAGAT
TTGTTAGGATTGTCGGATATGACCTATATCATCTCAACACTTCTTTGGTT
GCTAGTTGGAGCATTATATCAAGAAACTTAGCTTAGCCTGGATACTAGTT
GAAGGCTTGTCTGTAAGCCTGTTGACCTTTATATCCTTCAATAATTGTTC
ATTTAAATctcttcaacttttttcatatttatattattttatgaaaaact
CAGGAACTGAAGCTGAATAAAGAAAGCTAGCTTAGACTCATTAGACTAGT
TTAATAGTCTTATGTGTGGTAATATGAAATTATGTCAGACGTATGCGTGA
TAAATTAGGGAAAGATTTTAGGTTCCATAGTTCATCGGGAAATCTTTAAT
GTTTCGATACCTTatgtggataaattttcgcgtggattaattttcgcggt
tttcgcgaattttggccatttttgcgaaatttaatccacgcgaaatcttt
aaatcctcgtctcgcgaaaattagtacacgcgaaaagttatccacttaag
gtacgcTGGAGAGAAAGACTTCAaattaagaaaaagtttctgattgtaca
cctctgtgtcacagacccactgggatcccaggcccactggaaaatttggc
aaaaatttcgtccccggtgggaaaatacactggaatttcagccccactgg
gaaattgactttgatttcatccccattcgattCCATGCTCAAAAGTTTCA
CTACAAACCAATCCCACTGgatgtttcattttttaactttggaacaatag
agtttTTATacccattggaatttcaataggaatttttatccttactgagg
aaaaaagttccaccgggcctgtgagacaggggtgtgattgTGTAGATATT
TGAATTAACGAAGAAAAATCAATCCATCATTGATTAATTTattgtattca
atttttaagTAGTGTGTAataaattgtaaatattatatcaagaatatttt
ttacctttaaaatatttgtttgaAAATAGTGAGTAGTTAGGACGTGATTT
CAGAATTTTATTGATGGCTTCACTTAAGTTAGTATGCCTAAGCCAGACGG
CTCAATTTTGGTCAGAACCTAAGATTAAACTTAAATTTAGattaattgaa
attaaaaacaatcTCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004660XLOC_004660Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008294-exon-sc0000084-1491911889:601382..601663TCONS_00008294-exon-sc0000084-1491911889:601382..601663Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:601382..601663TCONS_00008294-exon-sc0000084-1510915933:601382..601663Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:601382..601663TCONS_00008294-exon-sc0000084-1575043694:601382..601663Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:604354..604468TCONS_00008294-exon-sc0000084-1491911889:604354..604468Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:604354..604468TCONS_00008294-exon-sc0000084-1510915933:604354..604468Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:604354..604468TCONS_00008294-exon-sc0000084-1575043694:604354..604468Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:604929..605091TCONS_00008294-exon-sc0000084-1491911889:604929..605091Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:604929..605091TCONS_00008294-exon-sc0000084-1510915933:604929..605091Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:604929..605091TCONS_00008294-exon-sc0000084-1575043694:604929..605091Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:605908..606022TCONS_00008294-exon-sc0000084-1491911889:605908..606022Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:605908..606022TCONS_00008294-exon-sc0000084-1510915933:605908..606022Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:605908..606022TCONS_00008294-exon-sc0000084-1575043694:605908..606022Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:606620..606804TCONS_00008294-exon-sc0000084-1491911889:606620..606804Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:606620..606804TCONS_00008294-exon-sc0000084-1510915933:606620..606804Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:606620..606804TCONS_00008294-exon-sc0000084-1575043694:606620..606804Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:607302..607457TCONS_00008294-exon-sc0000084-1491911889:607302..607457Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:607302..607457TCONS_00008294-exon-sc0000084-1510915933:607302..607457Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:607302..607457TCONS_00008294-exon-sc0000084-1575043694:607302..607457Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:607838..607915TCONS_00008294-exon-sc0000084-1491911889:607838..607915Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:607838..607915TCONS_00008294-exon-sc0000084-1510915933:607838..607915Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:607838..607915TCONS_00008294-exon-sc0000084-1575043694:607838..607915Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:608565..608648TCONS_00008294-exon-sc0000084-1491911889:608565..608648Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:608565..608648TCONS_00008294-exon-sc0000084-1510915933:608565..608648Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:608565..608648TCONS_00008294-exon-sc0000084-1575043694:608565..608648Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:609274..609432TCONS_00008294-exon-sc0000084-1491911889:609274..609432Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:609274..609432TCONS_00008294-exon-sc0000084-1510915933:609274..609432Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:609274..609432TCONS_00008294-exon-sc0000084-1575043694:609274..609432Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:609937..609967TCONS_00008294-exon-sc0000084-1491911889:609937..609967Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:609937..609967TCONS_00008294-exon-sc0000084-1510915933:609937..609967Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:609937..609967TCONS_00008294-exon-sc0000084-1575043694:609937..609967Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:612669..612805TCONS_00008294-exon-sc0000084-1491911889:612669..612805Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:612669..612805TCONS_00008294-exon-sc0000084-1510915933:612669..612805Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:612669..612805TCONS_00008294-exon-sc0000084-1575043694:612669..612805Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1491911889:614009..615399TCONS_00008294-exon-sc0000084-1491911889:614009..615399Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1510915933:614009..615399TCONS_00008294-exon-sc0000084-1510915933:614009..615399Clytia hemisphaericaexon
TCONS_00008294-exon-sc0000084-1575043694:614009..615399TCONS_00008294-exon-sc0000084-1575043694:614009..615399Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:601382..615399 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.386485	1.14434	0.974863	2.02358	2.78434	1.00745	2.49863	2.13213	1.618	0.170175	1.95855	1.74883	1.11691	0.339623	0.704695	0.722592	0.15981	1.00091	0.424126	0.774656	1.29274	1.95799	0.580184	0.231914	1.13123	1.79416	0.811103	0.610247	0.657461	0.45758
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008294 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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