TCONS_00008209 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00008209
Unique Name	TCONS_00008209
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3307

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000082:640355..655476-

transcript sequence

>TCONS_00008209 ID=TCONS_00008209|Name=TCONS_00008209|organism=Clytia hemisphaerica|type=transcript|length=3307bp
GTGCAAAGTAAAAACAATGACAATCaattaaaatcaacaaaataaacCTG
GCATCTTATCTGTCATGATCAACACTAACGTCACAGATGATGGATTTGAA
ATTTGTACACCAGATAGCAACCTGCTTGCTGTCCCGATTGGAATTGAACA
CGTGACCTGCTCATTTCCGAATTGTGGTCGTGTGGTAAAAAGCACATCAG
CCCTACGTCTTCATATGTTGAAAAGTCATGGTGTTGGAAAAGTCACTGAT
AAatcagtcaaaaagaagaaatatgCGTGTCCAGTTGTGGGTTGTTTGAG
GCATGCTATGTCACAGAAGAAAAGTTACTTTAACTCAATGTATTTATTGA
AAAGGCATTATCTTCTTTGCCATGGTGAAAAGAACTTTCCATGTGAGAGA
TGTGGAAGAAAGTTTGGAACTGAGATGTCATCCATACAACATTATCATCA
ATGTCGTAAATTGTTCTACTGCTCCTGTGGTCTCAATTACTCGAACAAAC
ATTTGTTGAAATCTCACCTGTTGAAGAATGACCGTCAGCAACATCATGCT
GTACCTGACCCTGATGAAGAAAtggaaaaagagaaagaaaaacatcaaaG
AGAAAAAGCAACAGCAGCACAAAATCAAATGGTTAGCCTTCCTTGTTTTC
TGTACATTCCAAAAGATAACACAAATGAGCTTCAACAACAACAACAACAA
CAACCCTCTCTGACAACCAACTCTCAATTGATTCAATATCCTGATAATGC
AACCCTTCAACAAAATCAAGAACGATTCATTCGAATTTTACCCAAGAAAC
AACAAAGAGCACATCAAGAACCATTCCAGTTTATAAATCCAACACAAATA
GCAGGATGTtagaaaatagataaaaaaagaaaacacaaactCAAGATGGC
GGCGCCTCCAGTAGCAGGCAGTGCATACAGCCATGCGGAGACCATCCAGA
AGTTGGAGCGCCTGAACCAGCTGGAGACAATGACAGCAGAACAACGCATT
cgcatcgaaaaatatcgaACGATGTATGAAACGCTGAAGGCTGAACAAGA
ACAGTCAGATGAGGACAAACGTCGTCGTGAGAACGAGTTGCATATGATTC
GTGATGAAATAAAGTGTGTTCAAAACAGATGTCAAGAGTTGGTATCGCAA
GCAAGACAGGAGAGAGATCAAAAGATCGATGAATGTGAAGAGCTAAGGAT
GAAGGTTTTGACGCCTCAAAAGATGGAAGTGATGAAGATCAAAATGACTG
AAGAGATTGAAGTACCTTACAAAACGAAAATGGAGGGATTAGAACAAGAA
GTGGATCGATATCGAAACGAATTCAATCGATTGCGATACGATTATTCTTT
TCTCAAGTCGGAATATGAGCATGAATTGACGCAGAAGAAAACATTGGTTG
ACGAACTGAATGGCAAAGCTGAACTGGAGAAAGAAACACTTCGCAAAGAG
ATCGCCTCGTTACGCGAAGAATTGGAGAACGCGGAGCCAGCTGACGTGCA
ACGTTTACGAAGTTTGCAGAAAGAAAATGCACAGTTGACTTTACGCGTTA
AAGGCTTGCATGCAGAGCTCGAAGAGATGCgagaaaagaaagaaacgatC
AACTCACAAATCGATCAGCAAAATCGACTTCAAGCACGACAAATATCAGA
ATTGAACGTCAGGTGTAAGTCATTGGAGaCGGAAAAGGAGACCTCGAAAC
TACAATACGAACGTCTGCAAAAAGAAGTGGAGAAATTGACACGAGAGCAG
gacAACACGAGTAATGatttacaaaaatccgaaaGGGAAAACCTCCAATT
GAAAAGTCAAGTAGAAGAAATCACCCATTCCAAAAAGATGGAACTGAACG
CTGTCAAAGTCAGTTTGATGAAAGACCGAGGGGACTTGGAACGAGAGCGA
GACACACTTCGCATGGAAGTCAACATGGTGAAGAATAAGTACACCGTTCA
AGAAAATAATCTCCAAGATTTAAAAACCAAACTCGAAGAAAAGGAACGCG
ATGCGATCAAACGCGTACAAACGATCAAAGAAGAAGAATGGAGCAAACTG
AACAAAGTTGAATCCGTCAAATCACAGTTGGAATCTCAGATCAGCAGTCT
AGAACAACAACAGATCAATCTTCATCAAAGTTATAAATCACAGCTCGAAC
AAATGGATGAGAATCTAAAAGCTGAAAAAGACTACAAGGAGAAATACGAA
CGCGATGTGGCTAACATGAAATTGATGTTGACACAAGAACGTCAAAAGAA
TAAAACTATTTCTCAGGAGAATGAGAAACTGAGCGACGTGAAATCACGAT
ACCAAAAACTACTTCAAGATCATGAAAGCACGATTTCATCAGAACACGAC
TTGAAGAACAATGTGGAAAAATACATCCACAATATCGAATTATTAAAGAG
AGAATTAGAAACGCAACAAAACGATATTCGAATGGAGCGCGAAACGCATC
AGAAACACACCCAAGACGTCTgCAAACGACACGAGGAAGACAAAGACAAG
CATCACGACCTcctcaaaaacattcaaaacgaaCACAAAGACCTCAAGAA
GAAATATGAAAAACTCACTGCTACTTgtaaaaagAAAATCAAACGTCTGA
AGACGGAGCTACAAACATCGAAAGAGCAATTACAAATTCTTCAGTCTAAA
GAAGATCAACATGAACTTGAAAAACAAGCTCTCAGgaaaaatttgTCTCT
GGAGCAAGAAAGAATGCGTCGGAAAATGCAAAAATTTCGACATCGCCAGC
AACAATTTGGTCATGTTTTGAACACCTCCAACTTCAACGTCATGGGTGGT
TTGGAAGGATCGCCAAACAAACATACCAGCTCCTTCAAATTTCCCCCCAA
TGAGTTCGGCGGAGGAGGGGCTCCGCTTCCACCTCGTTCCACAATTTCTC
CCATCACTGATTTCCAAGACGAAAACGAATCTCCGAATGATGGATGAGAA
TGCTCGTGAAAGAAATTTCCTCTTTTAAATCAGGTTTctcaaaaatttga
ggcgtttCTTCAATCTGTAAAAACTACAATTTTCTTAAGAGAGATCAAAG
CTGAGAcaatctcaagttttttcccgtgaaaaaagttatatttttcgCCA
GATTGAACCTCCCGAATTTAAGttaattttgtttgtatttgttTCATTCT
TTGTGAAATTAGAATACAAGTCATTGTAAATAGCaagttaattttaaaca
tttttagtaGTATCACCTTTAGACAAGTTTTTATAATTGTTCATATAAAT
TAGCATGTCATCATAGCGTATTTAACTTCAAAAGTAATAAATTACTGATT
AATTGAA

Run BLAST on NCBI

transcript from alignment at sc0000082:640355..655476-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00008209 ID=TCONS_00008209|Name=TCONS_00008209|organism=Clytia hemisphaerica|type=transcript|length=15122bp|location=Sequence derived from alignment at sc0000082:640355..655476- (Clytia hemisphaerica)
GTGCAAAGTAAAAACAATGACAATCAATTAAAATCAACAAAATAAACCTG
GCATCTTATCTGTCATGATCAACACTAACGTCACAGATGATGGATTTGAA
ATTTGTACACCAGATAGCAACCTGCTTGCTGTCCCGATTGGAATTGAACA
CGTGACCTGCTCATTTCCGAATTGTGGTCGTGTGGTAAAAAGCACATCAG
CCCTACGTCTTCATATGTTGAAAAGTCATGGTGTTGGAAAAGTCACTGAT
AAATCAGTCAAAAAGAAGAAATATGCGTGTCCAGTTGTGGGTTGTTTGAG
GCATGCTATGTCACAGAAGAAAAGTTACTTTAACTCAATGTATTTATTGA
AAAGGGTTGGTTATGTTTTCTATACCTACAAAATTTAAATTTCAAAATTT
AATGCAGCCTTAACTGGACATCTGTTTTGCTTAGTCACTCAGTCAACGTT
TTATACCAAGGTATTAGTGGAGATCATTTTGAGAGATTTTCTCTCTTTTG
CTTGAGTTTTGACGATTTTTCAACAAAAACTAAAAATATTCCAGTTTTTC
GATAGGGAAGTTCCTGAGTGAACTAACATTGAGAAAACTTGAGGGAAAAA
ATGGGGAAAAAGTTTAATGCTTTTCCACATTTCTAAATTAGTCAAATTTT
TCAAAAAGTCCAGTTGCACAGAAGGATGGTTAATCTTGTTTACTTGGAAA
CAATTTTAAGACATCTGTTTAACAATTGAACACGTCTACGTAGTAAGTTT
TGAAAAATTTTGCAATATTATATTATAGTTTTATCGTTTTTAGCATTATC
TTCTTTGCCATGGTGAAAAGAACTTTCCATGTGAGAGATGTGGAAGAAAG
TTTGGAACTGAGATGTCATCCATACAACATTATCATCAATGTCGTAAATT
GTTCTACTGCTCCTGTGGTCTCAATTACTCGAACAAACATTTGTTGAAAT
CTCACCTGTTGAAGAATGACCGTCAGCAACATCATGCTGTACCTGACCCT
GATGAAGAAATGGAAAAAGAGAAAGAAAAACATCAAAGAGAAAAGTATTC
TATTCATTGTGTTAATTCTTTAATCTTCGGTTTTGAAATTTACTTAATTT
GCATTGAAATGTTGAAATTTAGGATATTGGCTGCGGGGAATCTCTGTGTG
TATAGATTACTCTGCTAATATGCTAGAGGAACATCTCTTTTTTAAAGGCT
TTTTACATATACCGCAACTTTTCTATTCGACTTTATTTTTCATAGAGCAA
CAGCAGCACAAAATCAAATGGTTAGCCTTCCTTGTTTTCTGTACATTCCA
AAAGATAACACAAATGAGCTTCAACAACAACAACAACAACAACCCTCTCT
GACAACCAACTCTCAATTGATTCAATATCCTGATAATGCAACCCTTCAAC
AAAATCAAGAACGATTCATTCGAATTTTACCCAAGAAACAACAAAGAGCA
CATCAAGAACCATTCCAGTTTATAAATCCAACACAAATAGCAGGGTATTG
TACATCTATGAATCCTTTCCAATCTTTACCCCATATTTTCAATGTGATGA
ACTCAAGCCAACTANAAGTTACTTTAACTCAATGTATTTATTGAAAAGGG
TTGGTTATGTTTTCTATACCTACAAAATTTAAATTTCAAAATTTAATGCA
GCCTTAAACTGGACATCTGTTTTGCTTAGTCACTCAGTCAACGTTTTATA
CCAAGGTATTAGTGGAAATCATTTTGAGAGATTTTCTCTCTTTTGCTTGA
GTTTTGACGATTTTTCAACAAAAACTAAAAATATTCCAGTTTTTCGATAT
GGAAGTTCCTGAGTGAACTAACATTGAGAAAACTTGAGGGAAAAAAATGG
GGAAAAAGTTTAATGCTTTTCCACATTTCTAATTAGTCAAATTTTTCAAA
TAAAAAGTCCAGTTGCACAGAAAGATGGTTAAATCTTGTTTACTTGGGAA
CAATTAAGACATCTGTTTAGCAATTGAACACGTCTACGTAGTAAGTTTTG
AAAAATTTTGCAATTTAATATTATAGTTTTATCGTTTTTAGCATTATCTT
CTTTGCCATGGTGAAAAGAACTTTCCATGTGAGAGATGTGGAAGAAAGTT
TGGAACTGAGATGTCATCCATACAACATTATCATCAATGTCGTAAATTGT
TCTACTGCTCCTGTGGTCTCAATTACTCGAACAAACATTTGTTGAAATCT
CACCTGTTGAAGAATGACCGTCAGCAACATCATGCTGTACCTGACCCTGA
TGAAGAAATGGAAAAAGAGAAAGAAAAACATCAAAGAGAAAAGTATTCTA
TTCATTGTGTTAATTCTTTAATCTTCGGTTTTGAAATTTACTTAATTTGC
ATTGAAATGTTGAAATTTAGGATATTGGCTGCGGGGAATCTCTGTGTGTA
TAGATTACTCTGCTAATATGCTAGAGGAACATCTCTTTTTTAAAGGCTTT
TTACATATACCGCAACTTTTCTATTCGACTTTATTTTTCATAGAGCAACA
GCAGCACAAAATCAAATGGTTAGCCTTCCTTGTTTTCTGTACATTCCAAA
AGATAACACAAATGAGCTTCAACAACAACAACAACAACAACCCTCTCTGA
CAACCAACTCTCAATTGATTCAATATCCTGATAATGCAACCCTTCAACAA
AATCAAGAACGATTCATTCGAATTTTACCCAAGAAACAACAAAGAGCACA
TCAAGAACCATTCCAGTTTATAAATCCAACACAAATAGCAGGGTATTGTA
CATCTATGAATCCTTTCCAATCTTTACCCCATATTTTCAATGTGATGAAC
TCAAGCCAACTACAACCAGAGACTAGTCAACAATGTAAACAGCGCCAAAT
ACTACCCTCCAGTGCTCCAGTGCAAACATTACCAACCCAAACTCAACAAG
ATCCAATGTTACAAACTTCCTCATCTCTTGATTGTGAAAAGTCAACTGAA
AAACCAATTCATAAAGCCAAAGTGAAAAAACCGAAAGTTAAAAAACCAAA
AAAATCCGAACCTAAGAAGCAAAAAGCAAAAAAGGTGAAAATAAAAGAAT
CAAGATTCGAGAAGCATATGAAATTTATCACTTCAAAGGAAACACAGGAG
ATTCTAGCCGATGATGAACTTATTCAATCCACTTTATCCAGCCTGCAGAA
TGCAAAATGCAATTGTGCGTTATTCAAAGCAGGTAAGGTTTGCCGTCATT
TCTCTCCCAAGAAAGCAGCCTTCATTCAAAAGTCGAACAGACCTGCCAGT
GAAAATTTGATCACAAACTTCACACAGACAATGAGCACACAGGCTCAAGC
CACTGAACAGGTGCACACTGGCATCCAGACTAACAACGACACGCAGTTCC
CCATGGTGGAAGTCATGGAAACGTCCGATTTCAGTATTCAATGTCGACTA
TCGAATACAGGTGTCACTTCACAAGACGCATCAACTCAAGACACAAGTAG
TATGCTTCCCATCCCTATCATTGATAACCAGACACAAACAGACGATTTAG
TGACCCTACTCGACAGCTTACAAACCAATGCGCATCTCGCTGATATGGAA
ACCCAAACATATTCTGCGGAAAACGACAAGTCTACCTTACTGGATGATAT
TCTGAGCGGAAAGACGTGGGATAACGAGGCCAGTATTTATGTGAGGGAGA
CACACAATGAGAATAATCACATCCCTTCATTATTCATGACTGAAGGAGAC
ACGGAATGCAAACAAAACAATTCCACTCAAACTTTGGATGCGGCGTGTGG
CGTTGCATTTGATGTGCACCAAAACACGACGATCAGTGACAAAGACATTG
TGTTACCTTCACAGAACAATCATTTCATTGAACCTTTAAACATGAGTTTT
GGTACACAGACAGTCTTTGATGACGACAGCCTTTCTCAAGAAACATTCAG
CTTTGGGACACAAACAGGAGGATTTGAGAGCAATATGTTCAGCAGTTCAG
CAACACAGACTTGGGATGTGAGCGAGACTTCAATAAATGCCAAAACCACA
ATAGAAACACAAACGGCAATTTCGTTTGCTGATCTTTTGGATTCTTCGTT
CATTGATGAATATCTGAGCACTGAGCAAAGCACCTCAACTGAAACCCAAA
CTCCATTTGATCAAAACAGAGAGGTGGTCACCGCTGAAACTCAAACCCTG
TGAATGATATCTTTTCAACGAAATTTTTCGCTGTTTATACTTTTTTGTCT
TTTTGTCTATCAAGCTTTTGTTTTTGCTATTTCTTCAGAGATGATTTTTT
ATATCAATCTTTGCTTATAATAACCTTATACTTTTAATCGTTCCATAAGA
AAAATTATTTTTTGCTTCGTTTTTCTAAGATTTCGTTTTATTAGCACGTT
ATAGTACTTTGTTATAATATGTTTATTCCTATGAAACTTTTTTTTCGTTT
TTTTGAAAAAGTCGTTTGATGTACAAATTTATTTTATTATACATTGTTTA
TAATTTCTCTTTATGATAGATTTTTATAAAATGCCAACAAAAAAGAAAAC
GTTAATTTATACCTAGAGTTTATGTTCGACTGAATAAAGTTTCAAAATTC
ATTGTGTTGTTTCTTATTATCACCTTTTTGTATCCAGCCTCCAAGAATTC
CCCACCAAAGTTATTTTGTTGTAGTAACCATTTTGTATTCAATCCAATGC
AACTTTTTACAAACATTTCCACTTTTTTTTCAGATGTTAGAAAATAGATA
AAAAAAGAAAACACAAACTCAAGATGGCGGCGCCTCCAGTAGCAGGCAGT
GCATACAGCCATGCGGAGACCATCCAGAAGTTGGAGCGCCTGAACCAGCT
GGAGACAATGACAGCAGAACAACGCATTCGCATCGAAAAATATCGAACGA
TGTATGAAACGCTGAAGGCTGAACAAGAACAGTCAGATGAGGTATTATAT
CGTTTCGGCATTTTGTTTTCAACTTGAAGAAATCTTCTACCAAAATTCCA
CCTTAAATGTTGTCAATTTCATAACAATAGGGTTTTCCCCTTCTTTCAGG
ACAAACGTCGTCGTGAGAACGAGTTGCATATGATTCGTGATGAAATAAAG
TGTGTTCAAAACAGATGTCAAGAGTTGGTATCGCAAGCAAGACAGGAGAG
AGATCAAAAGATCGATGAATGTGAAGAGCTAAGGATGAAGGTATCTATGC
AACGCTTGCTTCACACCCCTGAAATGATTAAATCTTTCTCCTGAAACCTT
TTGAGCCTGTGAATGAAAATTCTTTCTCTTTCGAAGGTTTTGACGCCTCA
AAAGATGGAAGTGATGAAGATCAAAATGACTGAAGAGATTGAAGTACCTT
ACAAAACGGTAAATATTTTCCTTCATCGGCACACATTTCATTTTCCCGAA
GAATGGATGTTACACGCTCTTATTGTCTCTGTTTGTTTTACTGATATCGA
TTTGATCGTTTAGAAAATGGAGGGATTAGAACAAGAAGTGGATCGATATC
GAAACGAATTCAATCGATTGCGATACGATTATTCTTTTCTCAAGTCGGAA
TATGAGCATGAATTGGTAAGAGGGTCATTTTTTCTCTATTATTTGTTGCA
AATACTTCTTTCATCATCAAAATGCATATTTTACATGTTGTTATAATATC
CGTATCCGTTATTCACTTCAATTTTGTAGACGCAGAAGAAAACATTGGTT
GACGAACTGAATGGCAAAGCTGAACTGGAGGTAAGTCGTATTTTACGGTT
TTACGAACTTGTTTTTTTTTCAGTAGCAGTGGGCTGTACCTATAACTATC
CATACAGGGGATTGGAAGCATCATGAGTTGTTTTTTAAGTGACAATACTC
TTTCGTTATACTTACGAGCATTTTTTTCCAATTACGCTTTTCAGAAAGAA
ACACTTCGCAAAGAGATCGCCTCGTTACGCGAAGAATTGGAGAACGCGGA
GCCAGCTGACGTGCAACGTTTACGAAGTTTGCAGAAAGAAAATGCACAGG
TACACCCTCGTCATCAAGTTTCCTAAGAATTGTCCTTGTTTTTAGTTGTG
CTCGTTTGTATTTTGTGTATAAATCCCTTATCTTGTTTTCTTCCTTGGAA
TGTGTCCCTAACATCAACTTTACCGAAAGCTGAGAATGTCTTTCTTTTTC
GTTCAGTTGACTTTACGCGTTAAAGGCTTGCATGCAGAGCTCGAAGAGAT
GCGAGAAAAGAAAGAAACGATCAACTCACAAATCGATCAGGTTGGTTATG
TTAACGATAACTCTTGCTTTGTCAGGCTGATCTCATTTTTCGGTTAAGTT
GTTTTATTTTGGGAATAGTTTTGTTCTATACTTGATAAATTAAGTTGATA
AAGCTTCGTATTTTACTCGAAAAAAAATGCTATTGATTAAAATTGGCTTA
TTGATTGATAAAGTTTTGTTTAGGAGACAAAAATTTTCTCTCCTTAGAAC
TTATTATCAAAATTCAATATCTTTTATATATTGTGTATATAGGTTTCGTG
TCCCTGGGACCCTAAATCTTTTTGTAATACCTCCATATCTTTCTGATCTC
AGCAAAATCGACTTCAAGCACGACAAATATCAGAATTGAACGTCAGGTGT
AAGTCATTGGAGGTGAGAAAAGCCCTTAATTCTTTCTTCGGAACCTCAGA
TTCGATCCAACAATTATTGATATCTTTGAATCTTTTCTTTTTAGACGGAA
AAGGAGACCTCGAAACTACAATACGAACGTCTGCAAAAAGAAGTGGAGAA
ATTGACACGAGAGCAGGTCAGTCCTTTTTTCTCGCTCACGTGTCTCACCA
AAAACGACTATTCGCATTCCTTATAACGATTTTCCCTTTTTGGAATTTCA
GGACAACACGAGTAATGATTTACAAAAATCCGAAAGGGAAAACCTCCAAT
TGAAAAGGTAAACATATTTCCTAACTAACCAGTACAGCGAGAATAGACTA
AAAAAAATTTCAGCTTTAACTAAAGCAGATGCAAATTACGATTCACCTTT
TCTTTTCAGTCAAGTAGAAGAAATCACCCATTCCAAAAAGATGGAACTGA
ACGCTGTCAAAGTCAGGTAATTAAACTTTTATGGGAGGTGACTGTTTTAG
AGAGTATTTAAAGATTTTCCCTTTCTTCGAAAGTAGTTCTTTGAATTTAA
AGGCTGTCAACCAAACGTAACTTTTTCAACTTGAGATCTTTTCGTAATCT
TAAATTGTGACCGCTTGTGACTTTTTTCTTGTTATTAATGACAGTTTGAT
GAAAGACCGAGGGGACTTGGAACGAGAGCGAGACACACTTCGCATGGAAG
TCAACATGGTGAAGAATAAGTACACCGTTCAAGAAAATAATCTCCAAGAT
TTAAAAACCAAACTCGAAGAAAAGGTGAGGAATAGTTTTCTAGATGACTT
CTCTAATTTTTATTATTTGTTATTGTCTGTTTCAATGTATAATACAGTGG
AAACATTTTTAATGGACGACTTCTCTGTACATGTTTTGGAGTTTTGACCA
TGAGACTTATTTTAGTTAAGGAGACATATGAGTTATGGTTGTGAAGCCTC
AACTATAAAAATGAAGTTTAAAAAGGGGCCTTGTCAAATTTCTTAGTCTC
CTCTTTCCAGGAACGCGATGCGATCAAACGCGTACAAACGATCAAAGAAG
AAGAATGGAGCAAACTGAACAAAGTTGAATCCGTCAAATCACAGGTAACC
TTCAACCCGTCTTTGTCTGATTGCCATGTTCTTCTGCGGAAAGTCATGTG
ATTCAATATCATCTCGAGGAGAAAGAGCACTGTTGTTTAACACATATAAA
GATTTTATTTACATTATTTGCATTTACATTCCTCATTATTTTGAGTTTCC
AAGCGAAGATTTCGGAATTTCTATGGCTCGATATGGATGAATGATTTCTT
AATTTTCCCGAGGACAAAAGACTGACTTTGGACAAGTTTATCCATCCCAC
TTTAATAGGTATAAAATGAAAAGGGGTTTTTTGGGGGCTTTTGAATATTT
AATATATTCAAGGGGTATCGTGAAAAAAAAATTTCACCTCCCCCTTGCTT
CGTAGCCTTTTCGGATTAAGAATTGAAAAAAAGAGCCGTTCTTGTTTCTT
TTTGTTTCAGTTGGAATCTCAGATCAGCAGTCTAGAACAACAACAGATCA
ATCTTCATCAAAGTTATAAATCACAGCTCGAACAAATGGATGAGAATCTA
AAAGCTGAAAAAGACTACAAGGTAAAAAAGTCGTGCATCTGGTGTGTTCA
TAAAAAATGAACATCTCATTTCTTCAACTGATAGTCACAATATCGGACGA
TCTACGCAAATTTTTCGGATAGTTTTTGACGTCTCTTTTGGCCGAACAAA
TTCTCTTCAATTGCTTAGAAATATGACATTTAAAATTTTTTGGAATGTTT
TCAAAGAAAAGTCTTTACTAAAAAGCCCATAATATAACAAGCACTTCATG
GTATTTGTTCGGCCTCGAGTGGCCAAAAAATGACCGAAGTTTTGGCGGCT
CACTTGGAATAAAATTTTCTCAACTCGGATATTTTGATTATCATACTTTC
TACAATCATATACAAAGATCATAAAGATTTTGTTGAATGAAAGATCAAGC
CTCACTTTTCGATATTTTAGGAGAAATACGAACGCGATGTGGCTAACATG
AAATTGATGTTGACACAAGAACGTCAAAAGAATAAAACTATTTCTCAGGT
AACGTCTTCTTCATACTGCAACCCTTTCTTTTCTCATCCTTCGAATGAAA
TATATAATTACAGCAAGTAACAAAATTATGCCTAAATCGATAAATAAAAC
AATTTTAAGTAATTTACTATTGCTTTTCTTTTTGTGTTTCCCTCCCCTTC
CTCCTCCTCCCCAGCCTCCCTGGTGACAAACATATTGCGGTGACAAATTT
GTTCCATATAATTGTTTCAATAAACTCAAAGGGTTCCTCGGGCAAGTGAA
CACCACATCAGCGAGTTGACATTTGACAAGTGGAAAAAAGTCTTTCTTTT
GGTAGATTTTCTGCTCACGAGCGGGAAGATATTTGAAAGTGCCAGCATCG
TGATCTTGGAAAGGGTAGAGATCGATATGGCGATCACGATGGATGAGTCT
GGCCATGGGATCGGTGAACGAACATTCATCCATATATCGCGTCACGTTTT
TCCCTTTGCAATTATAACGCTTCCTTTTAAAGTAGGGAAGATTCCAGTCC
GGTGTGAAATACAAATAAAATCCTTCATCGTGTCTTGTGGATTTCAAAGC
ACGTGATTGGACGAGGATGGGGAGCTTTCTTAACGTCACCAGGTCATCCA
CGTGGACAGCCAGGTCTACATCACCATCATATGGCACAAACTCCTCGTCC
CTCCACGCTCCTAACAAAGTTCCTGCATCTAGAAAATATCGCACTTTATG
CTCTTCCGCTATTTCTTTCCATTTTCTCAACAAACGAAGAAAGATTTTCC
TGGCCACCAAATTCTTGCATGTACCATCTCCATAGTTTCGATGAGTTGTG
GAAGAATTTCGATCCAACCACTCCAAGCTACTGTTTTGTTCGTTTCTGTT
CGTTATTTTGTTGTCGTGTGTTTTCGTTGGAATGATGCTTCTTTTGAAAA
TATAATTGTGGCCTTCCCATGCATACAAAAAGTACAACACTACTACTGCA
CATGAACAGATCGCTAAAGTTTTCTGTTTGTTATCAAAGTTGCTCGCCAT
TACTATTATTATTATTATTATCAGTTATAACCTTTTTATCTATCCAACAC
GCTCAACAACAAACTCTCACACAGCGACAATTAAATAATGTCCTTGTAAT
TCAATCCTCCTCAAACTTTTTGACAAATTGTGAGCGTTGCCATAGTGATA
GATAATGATCGGTGATAAAAGATGACTGTGTCCTTTATGTTAATGTGTTT
CATGTTATTCTCTAGTGATTTAATTTATTAATATAAGATGCTTACACGAT
ACATGGCTTGGCATCAGGTTTTAGGTGCCCCCTAAGAATTCAGGTGACCC
CTAAGATTTAGGTAACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCAGCAGGTTT
TAGGTGCCCCCTAAGAATTCAGGTGACCCCTAAGATTTAGGTAACCCCTG
GTTGCCAAATATTTTAGGTGACCCCTAAGCCAATGACAATTTTCCAGAAA
TTTTAGCAAAATACGTAATACATTTTATCCAATAGGAAGGTTTTTAGTTT
TTCCTTAACGGTCATTTGAATGGCCAGATTGATGAATACAACAGAATGAC
AAATCTCAGAATGAACATGATTTAAAAATTTGGTTGCGAGCGAAGCGAGC
AGAAATTTTTGAGAATTTCAAATGACAAGATGAAAGTTTCCCATTTCCGG
AATGTTTACTAGACTTTATTACTAGACTTTATCTAGCCCCCAGGTCCATC
TGAAAAAAAATTAGGTGACCCCTAACATGGTTAGTCCCCCCTAGAAACAG
GCTAAAATCAGGTACCAATTACTGCTCGACCTTATGGCCCCCCCTCAGGC
CAGGGGGGGGGGTTCCAGCCATGCGATAATGATATTATTGAATTAATTAG
AAAGCATTGAACCCTTAGGATGAATACCGTAACTTGGTCTAATGTCGACA
TCCCTCGTCTAAATTCGACACCCTTTTCTAGAGCTGAAAATAATAGAAAG
GTCGAAACTATTTTTCTTTGCTTAGAGGTAAGAGAGGATAAATCCTTTTT
CAATGACCAATTCCAACTTTCATATTATTCCTATCTCTAAAGAAGGGTGT
CGAAATTAGAAGACGGATGTCGAGATTAGACCAACTTACGGTATTAGTTA
CCCCCTGCTTTCTCTTCTGGAGAACTTTCTTGGGAAATGAAATTCCATCT
TTTGAAAAAAAATTGTTTACACTTTTGCAGGAGAATGAGAAACTGAGCGA
CGTGAAATCACGATACCAAAAACTACTTCAAGATCATGAAAGGTAACCAG
ACTTCCTTCCAAATCACCAAGCTGAGCGACACCAAATTGTCAATCTGTGT
CTAAATCTTTGTTTATCAGATATTATTTTTCACCACACAGTTTCACGCCT
CATGCGATCATCAGATATACTAATTTAATTGGATTAATTTTCATCAGATT
TAATTTCGCGAGGCAAAGAAATCGCAAAAAGTTTAGGTTTTTTTTCTCGA
ATTAGCGATTTGAAAAATACCGCGTCGATTTATTTTGTGGATTTGTCAAA
AATCATTCGAAATAACCTTCAAAACAGGATTTCCGTCAACGCCATCGCAA
AGTCTTATTTTCGCAAAAAATGCAAAAACTTGTGAAAACGCGAAATTAAA
TCTCCTGGGAATCAACCCAGTTAAAGTATATTGTTAATCTACATATTTCA
CTGAAGTGTACGAATTTATTGGAATGTTTTTTTTCTGGTTCAGCACGATT
TCATCAGAACACGACTTGAAGAACAATGTGGAAAAATACATCCACAATAT
CGAATTATTAAAGAGAGAATTAGGTGGGTTTCTTATTCATTTCGTTACAC
TCTCATATTTAAAAAAAATATAAGTGACTCTCTTCTATTCGAATTTTAAG
GCACCAAAAACTTTCCTTCGAATTGGAGGTTGTTTTATTATTTTTTTCGA
ATTTCAGAAGCTCCGAATTATAGAATACCAAATTTAGAGGCCTTCGAAAT
GTAATGATTGGCCATATTTTGATTCAAATTTCCTGATGACGCTTCGACAG
AGAGGTAGTTAGGGCAGGAAAAACAAAATTCGAACATTCGATCATTTGAC
TTTCCTTTCAGAAACGCAACAAAACGATATTCGAATGGAGCGCGAAACGC
ATCAGAAACACACCCAAGACGTCTGGTAAGCCCCCCCCCCCCAATGGCTT
GAGAACATCTACATTGAATTTACTTTTTCATTTTTTCCCTGACAATGTGT
GATTTCGTATTTCTGCACTTTCAGCAAACGACACGAGGAAGACAAAGACA
AGCATCACGACCTCCTCAAAAACATTCAAAACGAACACAAAGACCTCAAG
AAGAAATATGAAAAACTCACTGCTACTTGTAAAAAGGTATTTTTTTACTC
ACTTCAAACTAAATTCGAATGTTAGAAAAGCTATGACATGATGGTACTAA
GAAGTGCCATGTTTTAATGTCTAAGATTTCCCTTAGCCATCTACTCACCC
TGTAGTGGCGATCTGAACCTTGAGTACTAGGTGAAGTTTTCTTTACTGTT
GAGATTTACCATAGCCATCTACTCACCCTGTAGTGGCGATCTGAACCTTG
AGTACTAGGTGAAGTTTTCTTTACTGTTGAGATTTACCATAGCCATCTAC
TCACCCTGTAGTGGCGATCTGAACCTTGAGTACTAGGTGAAGTTTTCTTT
ACTGTTGAGATTTACCATAGCCATCTACTCACCCTGTAGTGGCGATCTGA
ACCTTGAGTACTAGGTGAAGTTTTCTTTACTGTTGAGATTTACCATAGCC
ATCTACTCACCCTGTAGTGGCGATCTGAACCTTGAGTACTAGGTGAAGTT
TTCTTTACTGTTGAGATTTACCATAGCCATCTACTCACCCTGTAGTGGCG
ATCTGAACCTTGAGTACTAGGTGAAGTTTTCTTTACTGTTGAGATTTACC
ATAGCCATCTACTCACCCTGTAGTGGCGATCTGAACCTTGAGTACTAGGT
GAAGTTTTCTTTACTGTTGAGATTTACCATAGCCATCTACTCACCCTGTA
GTGGCGATCTGAACCTTGAGTACTAGGTGAAGTTTTCTTTACTGTTGAGA
TTTACCATAGCCATCTACTCACCCTGTAGTGGCGATCTGAACCTTGAGTA
CTAGGTGAAGTTTTCTTTACTGTTGAGATTTACCATAGCCATCTACTCAC
CCTGTAGTGGCGATCTGAACCTTGAGTACTAGGTGAAGTTTTCTTTACTG
TTGAGATTTACCATAGCCATCTACTCACCCTGTAGTGGCGATCTGAACCT
TGAGTACTAGGTGAAGTTTTCTTTACTGTTGAGATTTACCATAGCCATCT
ACTCACCCTGTAGTGGCGATCTGAACCTTGAGTACTAGGTGAAGTTTTCT
TTACTGTTGAGATTTACCATAGCCATCTACTCACCCTGTAGTGGCGATCT
GAACCTTGAGTACTAGGTGAAGTTTTCTTTACTGTTGAGATTTACCATAG
CCATCTACTCACCCTGTAGTGGCGATCTGAACCTTGAGTACTAGGTGAAG
TTTTCTTTACTGTTGAGATTTACCATAGCCATCTACTCACCCTGTAGTGG
CGATCTGAACCTTGAGTACTAGGTGAAGTTTTCTTTACTGTTGAGATTTA
CCATAGCCATCTACTCACCCTGTAGTGGCGATCTGAACCTTGAGTACTAG
GTGCCTCGTGTGCCTCTGCCTGTACCGACACCGACACAGGGTGATAAAAA
AATCGCGTGTTGGGATAGAGATACGTGTGCCTTAGTGGGATTAAAAATAA
CTGATGATCGAGGTTGAAATCTTGCGATATTTATGATATTATTCCTTCCT
TTCATGATGGTAGAAAATCAAACGTCTGAAGACGGAGCTACAAACATCGA
AAGAGCAATTACAAATTCTTCAGTCTAAAGAAGATCAACATGAACTTGAA
AAACAAGCTCTCAGGTAAAGTTGAGTTTTGGTACCTAAAATAACAGATCA
CCTTGGCTTAGATTTAACACTAGATCGACAAAAAAAAACTACGCATATTT
TTTACATTGTCCCTCTTATCTTTTTTTTTTAGGAAAAATTTGTCTCTGGA
GCAAGAAAGAATGCGTCGGAAAATGCAAAAAGTAAACCGCTTGTCTGTGT
TTACAATTTGCTCGAAATATGCACAATCTTTATTTGTTTCTCGGTTTTCC
CTTAATCTCCGAGCAGATTCTGATACTCCGTGCATGGCCTGTATTCACTG
TAAAGGCCATGGCTCCGTAAGAAAATCTGCCCAGATTGGCGCATCGCCTT
GATTTTTTTCATCCAGATTCCAGATTTGGGACAAATATAAAATGAGCTTT
TAAGCACGGTAACACGGTTTGACTAACATCAAACACTCGCCTATTAAGAA
TATAAACATTAGACAGTTGCTTTCGGTTTCGTTTTCAAGCAAAAGGCAGC
GCGGTCTTTGAATGTTTTAGCTGAACAACCATGTCAGATTGTCACATTCG
CAATACCCCTTTAGAGCAGAGCGTGGTATGCTCAGAACAGATGATCTTTT
ATGAGATTAATCAATCCTAAACATTTTCCTTTTTAGTTTCGACATCGCCA
GCAACAATTTGGTCATGTTTTGAACACCTCCAACTTCAACGTCATGGGTG
GTTTGGAAGGATCGCCAAACAAACATACCAGCTCCTTCAAATTTCCCCCC
AATGAGGTAAAGGTTTTCTTTCCAATTTTGAAGCTGATCCAAACAAGTTT
CATTTGATTAAACATTTCAAAAGTTTTTTCATGTTATTAACTTTGTCTAA
CTTTTTTTTTGGGCCAGAAAATTGCAATTAGAGAATGGTGATAATAATGA
CCTTCTACCCGAAAACAATATTAATAAAACGATTTTATTTTAAATTTTTT
TGAATATATTTTCTCAAAGCAAATTTGCATTAAATTGAGATTTCTTGAAT
AGTCTCGTACTCTCGGTCGCGGCGTCAATCAATCAAATAACTAAATAAAA
TATTCCGCTCTATTTTCAGTTCGGCGGAGGAGGGGCTCCGCTTCCACCTC
GTTCCACAATTTCTCCCATCACTGATTTCCAAGACGAAAACGAATCTCCG
AATGATGGATGAGAATGCTCGTGAAAGAAATTTCCTCTTTTAAATCAGGT
TTCTCAAAAATTTGAGGCGTTTCTTCAATCTGTAAAAACTACAATTTTCT
TAAGAGAGATCAAAGCTGAGACAATCTCAAGTTTTTTCCCGTGAAAAAAG
TTATATTTTTCGCCAGATTGAACCTCCCGAATTTAAGTTAATTTTGTTTG
TATTTGTTTCATTCTTTGTGAAATTAGAATACAAGTCATTGTAAATAGCA
AGTTAATTTTAAACATTTTTAGTAGTATCACCTTTAGACAAGTTTTTATA
ATTGTTCATATAAATTAGCATGTCATCATAGCGTATTTAACTTCAAAAGT
AATAAATTACTGATTAATTGAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004609	XLOC_004609	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000082	supercontig	sc0000082:640355..655476 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.02274	3.86682	2.24857	1.8597	33.567	26.4457	19.7985	21.7108	15.2594	15.7028	12.8246	11.3915	7.85883	8.05513	7.74098	8.87596	10.017	8.8457	5.62876	6.33534	6.24623	5.77445	8.76972	8.70017	30.4025	23.5538	5.48478	3.97892	6.4558	6.32401

Blast

[Close]

BLAST of TCONS_00008209 vs. Swiss-Prot (Human)
Match: CEP83 (Centrosomal protein of 83 kDa OS=Homo sapiens GN=CEP83 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.980e-57
Identity = 187/668 (27.99%), Postives = 377/668 (56.44%), Query Frame = 2

Query:  905 PPVAGSAYSHAETIQKLERLNQLETMTAEQRIRIEKYRTMYETLKAEQEQSDEDKRRRENELHMIRDEIKCVQNRCQELVSQARQERDQKIDECEELRMKVLTPQKMEVMKIKMTEEIEVPYKTKMEGLEQEVDRYRNEFNRLRYDYSFLKSEYEHELTQKKTLVDELNGKAELEKETLRKEIASLREELENAE-PADVQRLRSLQKENAQLTLRVKGLHAELEEMREKKETINSQIDQQNRLQARQISELNVRCKSLETEKETSKLQYERLQKEVEKLTREQDNTSNDLQKSERENLQLKSQVEEITHSKKMELNAVKVSLMKDRGDLERERDTLRMEVNMVKNKYTVQENNLQDLKTKLEEKERDAIKRVQTIKEEEWSKLNKVESVKXXXXXXXXXXXXXXXNLHQSYKSQLEQMDENLKAEKDYKEKYERDVANMKLMLTQERQKNKTISQENEKLSDVKSRYQKLLQDHESTISSEHDLKNNVEKYIHNIELLKREL-----ETQQNDIRMERETHQKHTQDVCKRHEEDKDKHHDLLKNIQNEHKDLKKKYEKLTATCKKKIKRLKTELQTSKEQLQILQSKEDQHELEKQAL-RKNLSLEQ-ERMRRKMQKFRHRQQQFGHVLNTSNFNVMGGLEGSPNKHTSSFKFPPNEFGGGGAPLPP 2884
            PP   S  + +++        + + M  ++R+R E ++  Y+TLKAE  +   +  + +NEL  + +E +  Q + Q L+ + R E  +K  + EE+++++LTPQK+E+++ ++ +E+E P + +   L++EV++YR  +N+LRY+++FLKSE+EH+  +   ++DE   K E E   L ++   LR +L N +   D +R+  L +E   L  ++KGL AE+ E++ +KE   +Q++   R+Q RQ++E+    +SLE EK+++ L+ ERL+KE++  + +     N L K+ERE   L S+V+E+ HS K+E+  +K+   + + +LERER+ ++ E++ +++   + +  ++  K  L EK+R+ I++VQ  KEE + KL  ++  K +LE++++ LE+ ++      +S+ +Q +E L+A +  +E   +++ +++L L Q+    +   +E  + SD+K +   L     S   SE+DL N+ +     +E LK+E      + ++  +  E+   +K  Q +     E+K K H+ + + + ++   K+K ++     KK+    + +L+  +E++++L++K+++ E E Q L R+N+  E   R++++++  + R  +F  ++   N      +  +P    SS   P  E      P PP
Sbjct:    9 PPGGDSGLTGSQS--------EFQKMLIDERLRCEHHKANYQTLKAEHTRLQNEHVKLQNELKHLFNEKQTQQEKLQLLLEELRGELVEKTKDLEEMKLQILTPQKLELLRAQIQQELETPMRERFRNLDEEVEKYRAVYNKLRYEHTFLKSEFEHQKEEYARILDEGKIKYESEIARLEEDKEELRNQLLNVDLTKDSKRVEQLAREKVYLCQKLKGLEAEVAELKAEKENSEAQVENAQRIQVRQLAEMQATVRSLEAEKQSANLRAERLEKELQSSSEQNTFLINKLHKAEREINTLSSKVKELKHSNKLEITDIKLETARAKSELERERNKIQSELDGLQSDNEILKAAVEHHKVLLVEKDRELIRKVQAAKEEGYQKLVVLQDEKLELENRLADLEKMKVEHDVWRQSEKDQYEEKLRASQMAEEITRKELQSVRLKLQQQIVTIENAEKEKNENSDLKQQISSLQIQVTSLAQSENDLLNSNQMLKEMVERLKQECRNFRSQAEKAQLEAEKTLEEKQIQWL-----EEKHKLHERITDREEKYNQAKEKLQRAAIAQKKRKSLHENKLKRLQEKVEVLEAKKEELETENQVLNRQNVPFEDYTRLQKRLKDIQRRHNEFRSLILVPNMPPTASI--NPVSFQSSAMVPSMEL-----PFPP 656

The following BLAST results are available for this feature:

BLAST of TCONS_00008209 vs. Swiss-Prot (Human)

BLAST of TCONS_00008209 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CEP83	2.980e-57	27.99	Centrosomal protein of 83 kDa OS=Homo sapiens GN=C...	[more]

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TCONS_00008209 (transcript) - C. hemisphaerica