TCONS_00008203 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008203
Unique NameTCONS_00008203
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1542

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008203 ID=TCONS_00008203|Name=TCONS_00008203|organism=Clytia hemisphaerica|type=transcript|length=1542bp
atagagACCACCCTGAGCAAATAAATACTCATGAAAAAGTGAAAGATAGG
TGACATGAAGGACATCATTATGACATCCTAAAGACGCCACAACGAATGCA
AGGTACTCTATATCTTTCACAAAATCTTCCTACCAAGAGTTATTCTATCA
ATTTGATGcaaagatgaagatgaaaatatttttctgttttgttgtTTCGT
TTTTCATTGTAAAAGCGTACGAAGAATTCAGAGGGAACCAAGTGCTTCGT
ATCATCCCATCCAACGATGTTCAACTAAAAGTTCTCAAGAAATGGATTTC
AAGCAACCCTTTGGTTGATCTTTGGAAAGAGCCAAGTGCACCTGGCCACG
TTGTAGACATCCACATGCCAAAAGGAAAGATCTCATCTTTCGAGAAATTG
TTGACAGCCCATGGAATTTCTTATAATATCATGGTCCCTGATGTGGAAGA
TCTTTTGAATGAAGAAGAACTCTCCAACATGAAGAACGGCTTCTCAGCAT
ATGCTTTCAACGCATTTGATTACAACAAGTTCAATGATTGGCCGGAAata
CGACGggaactggaaaatttggtaTCAATCTACAGTTCAAAAGCTTCTTT
GTTCAACGTTGGTAAAACTTACAAGGGAGAGGAGCAAATTGGCATCAAGG
TGACAAACGGTGACGGGCGATCAAAACCAGTTGTTTGGATTGATGGAGGT
ATCCATGCAAGAGAATGGATTTCACCCGCCACTGTCATGTACTTCATGAA
CAAGATGTTGATTGACCAAACTGACCGTCGTGTGTCACAAGCCTTAGCCA
AATACGATTTCTTCTTCATGCCCGTGTTTAACATTGATGGGTACAAATAC
ACTTTCACTGGAAGACAAGCACGTTTATGGCGTAAAACACGAAAACCATA
CTCTTGGTATCAGTTTCCATGTAAAGGAGCAGATCCCAACAGAAATTGGG
ACAGCCATTGGGATGAAGCAATTGGGACCAGCGATTTTTGTATGTACGAA
AATTACCGCGGCCCGAAACCGTTCTCGGAAGTGGAAGTGGCCAACGTGGC
AAGGTTTCTGAAAACGTTGAACTTGAAGTCTTATTGGAATGTCCATGCTT
ACGGTCAATATGTTTTATATCCGTGGTCCTGGACCAAAAAGCCGGCACCC
GAAGCAGCTCAAATGaaaaacgTGGGTGATGTTTTTGCAGCAGCTGCTCG
CTTACGGTATGGAACACTCTATCAAGTTGGACAACCTGCAGACATCTTGT
ACGCTGTATCCGGAGGAAGTATCGATTATACTTATGAAAAATTGGGTGTC
GTCTACTCATATGCTTTGGAACTTCGTGATACTGGTCGCTATGGTTTCGT
CCTCCCAGCTAATCAAATTCAACCAAGTGGAGAAGAGACTAGTGATGCTT
TCTTAGCCGCTGTCCTCGCTAtgaaataatttgtttttttgtgagaaaga
aataCAACTAAGagattgaattgaaaattatttttcatttttatttgata
tatGCAGTAAGATTTGATATTAGCAAAATCATTAGATGCCGA
Run BLAST on NCBI

transcript from alignment at sc0000082:560665..569813-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008203 ID=TCONS_00008203|Name=TCONS_00008203|organism=Clytia hemisphaerica|type=transcript|length=9149bp|location=Sequence derived from alignment at sc0000082:560665..569813- (Clytia hemisphaerica)
ATAGAGACCACCCTGAGCAAATAAATACTCATGAAAAAGTGAAAGATAGG
TGACATGAAGGACATCATTATGACATCCTAAAGACGCCACAACGAATGCA
AGGTACTCTATATCTTTCACAAAATCTTCCTACCAAGAGTTATTCTATCA
ATTTGATGCAAAGATGAAGATGAAAATATTTTTCTGTTTTGTTGTTTCGT
TTTTCATTGTAAAAGCGTACGAAGAATTCAGAGGGTAAGGCTTTAATCTT
TTCAATGTTTGACGAACAAGACATCTTATTGAATCATTGTAATCTTTCTT
TGACCTCAACATTTCCAGGAACCAAGTGCTTCGTATCATCCCATCCAACG
ATGTTCAACTAAAAGTTCTCAAGAAATGGATTTCAAGCAACCCTTTGGTG
AGTGTCCTTTTTTATTAGAAAAGAAGAGAAGAAAATGGGAATAACGAAGG
AACTTGATTTTTACAAAATTGATTTGCAGGGGGCCAGAGTGTCCTAGGTT
ATAAAATATCAAAAAAAAATGCTTATTAGTTTCCTGCAAGATCTTTTCTC
TTGCATACCTTAGGTTGATCTTTGGAAAGAGCCAAGTGCACCTGGCCACG
TTGTAGACATCCACATGCCAAAAGGAAAGATCTCATCTTTCGAGAAATTG
TTGACAGCCCATGGAATTTCTTATAATATCATGGTCCCTGATGTGGAAGA
TCTTTTGAATGAAGAAGAACTCTCCAACATGAAGAACGGCTTCTCAGCAT
ATGCTTTCAACGCATTTGATTACAACAAGTTCAATGATTGGCCGGAAGTA
AGTAGCCATCATATTTTATTCACCCACACAAGTTTACTGACATGGTTTGT
TAAAGAAAAAGCCAATTAAGCCTGAGATTTAAATTAACCTTATTTTTACG
TCTTATCAACTCATATTTTCATTTTTTTAGATACGACGGGAACTGGAAAA
TTTGGTATCAATCTACAGTTCAAAAGCTTCTTTGTTCAACGTTGGTAAAA
CTTACAAGGGAGAGGAGCAAATTGGCATCAAGGTTAGAATCTCTTGAAAG
ATCGATCGAATCGTTTATTCCTCTAAAAGAAATTTTCTTAACCTTTCTTA
ACCGACGGCAATTTTTTACTAACCTCCCAACACACCTTATCTTTTTGACA
GGTGACAAACGGTGACGGGCGATCAAAACCAGTTGTTTGGATTGATGGAG
GTATCCATGCAAGAGAATGGATTTCACCCGCCACTGTCATGTACTTCATG
AACAAGGTTAGAGGTCATATTTCTTTGGAATACACTTCTTTCCTTGTTTT
CCTTGTTTTCCTTAAACACTTAAAAAATGATCAAATTGGAAATCGCCAAA
GAAAATCTTCCATTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAAA
TTCACCTCTGTCCGTTCGTCCGTCCGTCCGTTCGTTACCAGCTTTTCTCG
AGCTTTTCTTGAATCATAGGAATCATTTGATTTTTGGTGCAAAGGTGCAA
AACGGTGGTGGCCAAAATGTGACGGAGCCCGATTTTCGAAAAAACGGGTT
TTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCA
TGAAAGTAGGTAAAAGATGGGTCAAGCAGATTTTAGTAAAAAAATTTTTC
AGCTCAAAAACGCATCTTTATCTATAAGAATCACTATTATTAAGCATACA
TCAATGTTCTTAGCCAAATTACTCAATTTTTTGATGAGANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATTTTGGTTTCTAAAC
GTTTTTTTTATAAGAAACAAACGACTAATTTTAATAAATCGTCACTATTT
GTGTTCTGAATGATTGTTTAACGTTCATGCTCGCGTAGATATCAATTATA
TATGTGTTAAATGCATAACCAGGTAGTTCCATAAAAGTATCACTTGTTTT
CATAGATGTTGATTGACCAAACTGACCGTCGTGTGTCACAAGCCTTAGCC
AAATACGATTTCTTCTTCATGCCCGTGTTTAACATTGATGGGTACAAATA
CACTTTCACTGGAAGACAAGCACGTTTATGGCGTAAAACACGAAAACCAT
ACTCTTGGTATCAGTTTCCATGTAAAGGAGCAGATCCCAACAGAAATTGG
GACAGCCATTGGGATGAAGGTTTGAGATGTTATTATCTTTTCAGGAATTA
ATGTTTTTGAAATAAGGTCTCTACCGAATGCTCGAATAAAAAAGAGATGG
ATTTTGCGTGTTGACATTTTTTTTAAATCAGGAATACCTAACGTCTGGTT
CCATTTGAATTAATGAGAAAAACTTTCGATGTAAGAAGGATATTCTCTTT
GTTGTTATTCAGCAATTGGGACCAGCGATTTTTGTATGTACGAAAATTAC
CGCGGCCCGAAACCGTTCTCGGAAGTGGAAGTGGCCAACGTGGCAAGGTT
TCTGAAAACGTTGAACTTGAAGTCTTATTGGAATGTCCATGCTTACGGTC
AATATGTTTTATATCCGTGGTCCTGGACCAAAAAGCCGGCACCCGAAGCA
GCTCAAATGGTAGGTTATCATTTCGAATGGATTCTGTATAGTGAAAAGTT
TTATAAATTCTATTTGTTATTTATTTTGTAGACTGGCACGCCAGTCGGGC
TGGAACGGTATCACGCGGGAAAAGTGAGCGTAGGAGTTAGGTAAGCGTAG
GAAGAAATTTTGTCGGCGGTGAGGGCTGAAAGCCCGACTGGAGCGAAACC
CCAGGAAGGAAAAAACGGCTAAGCTGAAGCCCCAATCTTACAACGCCAGA
TTTCGGCGTTGTAGAAATGAATGAACTTTGAGAAATTCATGAAATGAGAA
ATGAAAACTTCCGTCAAAGTCGCAGATCGTGTTGTTTTGATTTTTGAGGA
GGGAGTGATTGGAAAAAATAATGGCTGACTTCTAGTGGAAATTTTTATTT
GAAAAGATTTTGTTTTGTTTCTTGTTTCTTATTGATGAGTCTCTTCCTTG
TGTATATGTGGCTTTTCTTCATGGTTCTCTGCATGCAAAATTCTTTGGCT
CATTTTTGATTGTTTTTTGTTTTGATTTGAGAGGTAAGAGAAGATGGAAA
ATCTTGTAACATCAGTTATCAGAACTTGTTGACTTGTTATCTTTTCCTAT
TCATAACTCATTCAATTTTAGGAATGGAGTATTCAGATNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAAAACTTTTCTGTCACCATATAAACTCTG
GATTTTCTATCAGAGCTATCTTATCACAGCACTAAATTCTGCAAATTTCA
ATTTTTCACAAATTAAATTTGTACATGAATGAATTTGTACACTTAATTAT
AATAATACAGTTATAATAATAATTATGCACCAATGTGTCATTGTTTTGAG
GTTGGAGTTTTAGTTATTCAACATATGACATCTTAACTATTAAAAGTAAG
TATTTTTCTGTAAGTTTTCCATTTAATTTTCTATGTGTACGTGTAATTTT
CCTGTGCTTGGCTGGTACGTTACATGCTGACAGTCAGGACAGGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTCTCCT
ACGCAGCTCCTATTCTAGCAAACGCCTGCCGCCTTTATGTTCCCGCCCTC
TGACATGATTAATTTACAGACTAGTTTGCTAGTCTATTTATTTTGTTGAT
TTGTAATGCGTTCTTCCAGAAAAAAAACTAGCCGGGATATATTTTCCGGG
CCTATTAAAAAAATGTCATAAACTTGTCATGTCTGGCGGAGGTAAATTTA
GAGTTAAAGTTTTTCCTATTCCAAGCTTTTCTTTTCTTTCAGAAAAACGT
GGGTGATGTTTTTGCAGCAGCTGCTCGCTTACGGTATGGAACACTCTATC
AAGTTGGACAACCTGCAGACATCTTGTGTGAGTTTTTTTCATTTCTTTAT
TACATTAAAAATCTTTTAAAAAGTTAAGTTAGATGTCTAAGAAGGCTGTG
AAGTCAAAATATTGTTCATAAGAAATGTGTTATTGTTTTAATGGTTAAAT
GCAGAAGAAAAAATGATAAATAAATGTTACAAGGAACAACCTTGCGAGAA
AAGTCTTTCACTTTTTTCATTATAATACATACTATGTTGGTTCATTCACT
TGTTCACCTTTGAATATTCATCTTTATCAAGAACGATGCGTTTCTCATGC
CAAATTTTTTCAGTGTCATATCTAACCAAATAAGCTTTTTATCCGCAGTC
CGCACGGGTTTGCGCCATTTGTTTCTTGGAACATTGAAATACCACTTAAT
CGTGCTTTCGAAAGGAAGGTTTAATATTTTCTGTTCCTCACTTTCTAGTT
GCACTGTCTTATTTGAGTCTCCAAATGAATTTTTCAAACAATCACTATAA
ATCACCAACTCTTTGGAATCCTCAGATAACTTTAGATAAAACCAGCGCAT
ACTGAATGGTTCATAGAGAACTCTCAAGAGAGTGACCAAGAAAAATGCTT
GGCTTCAAATCTGAACGCTTCCCTAACCAGCTCGCCTTGTTCAAGGTAAA
AAACCTGTACGGCTATTGTGAAATATTCTTCAATAATAAGCAAACAATGA
CTGCGTGGTGGACGAAAAATTGTGCTGAAGTTTTTGCCGGTATGATCGAA
CCCCGCCGTAGAATATTCGAAGGGTGGTTTTTCGCCGACCATATCCACAT
GATTTTCTTGTCGCCATTTTTCAGTTATCTTAAATTCCTGCGTGTCAAAT
TAATGGAAGAAAGAACTGTTTTTGTACTTTCTTCGAAGAAGCTATTTTTG
ATTTGTTTTGAATTGAGAGGGATAAATTGGAACGTCGATGATTTAATCAT
GTAGCCCTGATCATGGGCTTTCAGAAAATTATATGGTTTAGTTTGTTTAA
ACCAACCGTTGGCGAGATATAACGATTTTAAAATCGAAAAAGAAGTGCTG
ACTCGGCAAAAATAAGCGTTTTAAACGATTTTAAAATCGTTATATCTCGC
CAACGGCTGATCTCAACATTTTACACCATACAATTTTCTGAAAGCCCATG
ATCAGGGCTACATGATGAGCATGTCGATGTTCCAATTTATCGCTCTTAGT
AAAAATGCTGACGTCATCAAAATTGTCATTTTTTGGACTTTAGAGGTTAT
ATCTCGGGACCACGTGGTCCAAATTTCAAAAGTGACCCCATTTTCTTTAT
ATACTCATCGAAAGGAATCTCCCTGTCTAATTATTTTTGACATTTGAAAA
CCATTAAAAATCAGTTATCAAGGGTCCCCCCTTGATTAATTGTAGAAAAA
AGTACCGTCCGCCATTATGGATTTGAGGGTGTTCCCATCTCCCTGGGGGT
AGAGCTTTTCTTTGGTGATTCCTGACCTGTTCCTTGACCTCTGTGCAAAA
TTTCATCTCTACACCGTTTTTGTCCGGGTATTTATGCAATTGTACTGGAG
CCTTATCCGCGTGCTGGCCTAGCAGACGAATAAGACGCAGTGGGTGAGTG
AGTCTAGACTACGAAAGGGACGGGCTAGAGGAACCTAGGAGAGTAGAACC
TAATCCTATTTGCAGACAGGAACGGGAGACTATAGTGCTATAAATAAGAA
AAGGATACTTACAAACCTATGTCCTGAGCAGGTCCGCCGCCGATCGCTGC
CGAAACAACACTAAAGTTTAGGAGGGCTGGACAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGGCGTTAGAAGGGCGCTAGATACGATCAGTAAAGGTAT
AGCCGAAGGAACTTTAGTACACAATTCTACCTGACTATACCACTGGTGTA
AAAATGAACGTTGTAGCATAAGTAGAAAAAAAGCTCAATTTTTGCAATCG
CAAATTCAACCGCTAAAAATTGCGAATTTTTCAACCAAAAATAAATTCAA
ATATAGCGCTTTTGATTCTCTAAAACAAGCAAAAAAAAATTTCGCAATTA
TATCGGACTATCAAAAGTTACAGGCATTCTTGTTTCTACTGCCAATTATA
TCTTGATACACTTTAGCGATTTTCTTTAAAAAACTTAGAAAAAAATGACC
GTGGCACTTAAAGAGTTATAGCCTCACTCAGTTGAAACAGCTTTGCTTCG
ATTACCCAACAGTTTTTGTCAGCAGTTTACCCCACTGTTGATTTCTCTTT
ATTGCAGACGCTGTATCCGGAGGAAGTATCGATTATACTTATGAAAAATT
GGGTGTCGTCTACTCATATGCTTTGGAACTTCGTGATACTGGTCGCTATG
GTTTCGTCCTCCCAGCTAATCAAATTCAACCAAGTGGAGAAGAGACTAGT
GATGCTTTCTTAGCCGCTGTCCTCGCTATGAAATAATTTGTTTTTTTGTG
AGAAAGAAATACAACTAAGAGATTGAATTGAAAATTATTTTTCATTTTTA
TTTGATATATGCAGTAAGATTTGATATTAGCAAAATCATTAGATGCCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004604XLOC_004604Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008203-exon-sc0000082-1575043694:569580..569813TCONS_00008203-exon-sc0000082-1575043694:569580..569813Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1575043694:569417..569495TCONS_00008203-exon-sc0000082-1575043694:569417..569495Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1575043694:569017..569250TCONS_00008203-exon-sc0000082-1575043694:569017..569250Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1575043694:568782..568883TCONS_00008203-exon-sc0000082-1575043694:568782..568883Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1575043694:568558..568662TCONS_00008203-exon-sc0000082-1575043694:568558..568662Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1575043694:567495..567708TCONS_00008203-exon-sc0000082-1575043694:567495..567708Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1575043694:567105..567301TCONS_00008203-exon-sc0000082-1575043694:567105..567301Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1575043694:563487..563571TCONS_00008203-exon-sc0000082-1575043694:563487..563571Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1575043694:560665..560956TCONS_00008203-exon-sc0000082-1575043694:560665..560956Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:569580..569813TCONS_00008203-exon-sc0000082-1510915933:569580..569813Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:569417..569495TCONS_00008203-exon-sc0000082-1510915933:569417..569495Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:569017..569250TCONS_00008203-exon-sc0000082-1510915933:569017..569250Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:568782..568883TCONS_00008203-exon-sc0000082-1510915933:568782..568883Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:568558..568662TCONS_00008203-exon-sc0000082-1510915933:568558..568662Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:567495..567708TCONS_00008203-exon-sc0000082-1510915933:567495..567708Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:567105..567301TCONS_00008203-exon-sc0000082-1510915933:567105..567301Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:563487..563571TCONS_00008203-exon-sc0000082-1510915933:563487..563571Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1510915933:560665..560956TCONS_00008203-exon-sc0000082-1510915933:560665..560956Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:569580..569813TCONS_00008203-exon-sc0000082-1491911889:569580..569813Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:569417..569495TCONS_00008203-exon-sc0000082-1491911889:569417..569495Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:569017..569250TCONS_00008203-exon-sc0000082-1491911889:569017..569250Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:568782..568883TCONS_00008203-exon-sc0000082-1491911889:568782..568883Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:568558..568662TCONS_00008203-exon-sc0000082-1491911889:568558..568662Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:567495..567708TCONS_00008203-exon-sc0000082-1491911889:567495..567708Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:567105..567301TCONS_00008203-exon-sc0000082-1491911889:567105..567301Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:563487..563571TCONS_00008203-exon-sc0000082-1491911889:563487..563571Clytia hemisphaericaexon
TCONS_00008203-exon-sc0000082-1491911889:560665..560956TCONS_00008203-exon-sc0000082-1491911889:560665..560956Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:560665..569813 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.243683	0.747519	0	0.270141	0	0	0	0	0	0	0	0	0.228351	1.20335	39.5905	25.8426	2.84809	4.5304	0	1.12914	0.322265	0	27.9079	18.2661	17.9759	29.4853	2.5944	2.25097	173.167	260.681
Blast
[Close]
BLAST of TCONS_00008203 vs. Swiss-Prot (Human)
Match: CBPA4 (Carboxypeptidase A4 OS=Homo sapiens GN=CPA4 PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 1.655e-83
Identity = 151/395 (38.23%), Postives = 227/395 (57.47%), Query Frame = 2 
Query:  221 EEFRGNQVLRIIPSNDVQLKVLKKWISSNPL-VDLWKEPSAPGHVVDIHMPKGKISSFEKLLTAHGISYNIMVPDVEDLLNEEELSNMKNGFSAYAFNAFDYNKFNDWPEIRRELENLVSIYSSKASLFNVGKTYKGEEQIGIKVTNGDGRSKPVVWIDGGIHAREWISPATVMYFMNKMLID-QTDRRVSQALAKYDFFFMPVFNIDGYKYTFTGRQARLWRKTRK--PYSWYQFPCKGADPNRNWDSHWDEAIGTSDFCMYENYRGPKPFSEVEVANVARFL-KTLNLKSYWNVHAYGQYVLYPWSWTKKPAPEAAQMKNVGDVFAAAARLRYGTLYQVGQPADILYAVSGGSIDYTYEKLGVVYSYALELRDTGRYGFVLPANQIQPSGEET 1390
            E+F G+QVLRI   N  ++  L + ++SN L ++ WK PS+    VD+ +P   + +F+  L + G+ Y + + D++ LL+ E+     N     + N F+Y  ++    I  E++N+ + +   A    +G +++      +K + G G  +P VW++ GIH+REWIS AT ++   K++ D Q D  ++  L K D F +PV N DGY YT T  Q RLWRKTR   P S     C GADPNRNW++ +    G SD    E Y GP   SEVEV +V  F+ K  N K + ++H+Y Q ++YP+ ++ K AP+A ++  V  + A A     GT YQVG     +Y  SG SID+ Y+  G+ +++  ELRDTG YGF+LPANQI P+ EET
Sbjct:   19 EKFFGDQVLRINVRNGDEISKLSQLVNSNNLKLNFWKSPSSFNRPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNEDDEMQHNEGQERSSNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQT--QNRLWRKTRSRNPGS----SCIGADPNRNWNASF-AGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCTTVYPASGSSIDWAYDN-GIKFAFTFELRDTGTYGFLLPANQIIPTAEET 405
The following BLAST results are available for this feature:
BLAST of TCONS_00008203 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBPA41.655e-8338.23Carboxypeptidase A4 OS=Homo sapiens GN=CPA4 PE=1 S... [more]
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