TCONS_00008191 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008191
Unique NameTCONS_00008191
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1094

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008191 ID=TCONS_00008191|Name=TCONS_00008191|organism=Clytia hemisphaerica|type=transcript|length=1094bp
aCGACGggaactggaaaatttggtaTCAATCTACAGTTCAAAAGCTTCTT
TGTTCAACGTTGGTAAAACTTACAAGGGAGAGGAGCAAATTGGCATCAAG
GTGACAAACGGTGACGGGCGATCAAAACCAGTTGTTTGGATTGATGGAGG
TATCCATGCAAGAGAATGGATTTCACCCGCCACTGTCATGTACTTCATGA
ACAAGtTGCTTACAAACAAAGCGGATGATCGTGTGTCAAGAGTCTTAGCC
AAATACGATTTCTACTTGATGCCCGTTTTCAACATTGATGGGTACAAATA
CACTTTCACGAATCGATCAACTCGATTGTGGCGCAAGACAAGGacaaaat
acaaagaaagtaaACCACCTTATAAAACGTGTTACGGAGCAGACCCCAAC
AGAAATTGGGATAGTCATTGGGAAACAGGTATCAACGCCAGTGACAATTG
TACAACAGATTACTACAGAGGGCCTTTTGCAGGATCTGAAAAATGTGTTG
CAAACGTCCAAACGTTTCTTCGTCAACTGAAGAACTTAACTTCGTATTGG
AATATCCATGCTTTCAGTCAGCTTGTCCTCACAACGTGGTCTTGGACGAG
CGCCCTATCGAAAGATTATCCAGAAATTAAGCGTGTTGGAGATGTTTTCG
CCGAAGCCGTCAGTAAAAGATATGGCACACATTATAAAGTTGGTCCACCT
TCAAGATTTCTGTACCCAGCTTCAGGTTGCAGTATTGATTTCGCACATGA
TGAGCTGAAAGTCGTCTACTCTTACGGTCTAGAACTGAGAGATAAAGGCC
ATTATGGTTTCGTTCTCCCAGCTAATCAAATTCAACCAAGTGGAGAAGAG
ACTAGTGACGCTCTACTAGCCGCTGTCCTCGCCATGAAACCAGAATATCA
AATGTTTTCCTCTTCGAGAGCAACCAGGATACGATTCCTCAATGATCCAg
cagttttgtttattttagtaTTTCTATCTAATCTTTTCATATATAGAAAT
TGTTCAtaaatgtaaatattttttgaattatctTACCTTAGGGTTCAGAA
ATACAGGCTTGAAATAACCTGATCTACACATACCCATGTCCTTT
Run BLAST on NCBI

transcript from alignment at sc0000082:548991..568881-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008191 ID=TCONS_00008191|Name=TCONS_00008191|organism=Clytia hemisphaerica|type=transcript|length=19891bp|location=Sequence derived from alignment at sc0000082:548991..568881- (Clytia hemisphaerica)
ACGACGGGAACTGGAAAATTTGGTATCAATCTACAGTTCAAAAGCTTCTT
TGTTCAACGTTGGTAAAACTTACAAGGGAGAGGAGCAAATTGGCATCAAG
GTTAGAATCTCTTGAAAGATCGATCGAATCGTTTATTCCTCTAAAAGAAA
TTTTCTTAACCTTTCTTAACCGACGGCAATTTTTTACTAACCTCCCAACA
CACCTTATCTTTTTGACAGGTGACAAACGGTGACGGGCGATCAAAACCAG
TTGTTTGGATTGATGGAGGTATCCATGCAAGAGAATGGATTTCACCCGCC
ACTGTCATGTACTTCATGAACAAGGTTAGAGGTCATATTTCTTTGGAATA
CACTTCTTTCCTTGTTTTCCTTGTTTTCCTTAAACACTTAAAAAATGATC
AAATTGGAAATCGCCAAAGAAAATCTTCCATTTTTGGACCTACCCCGGTG
GGGTGGAGGTCCTATAAATTCACCTCTGTCCGTTCGTCCGTCCGTCCGTT
CGTTACCAGCTTTTCTCGAGCTTTTCTTGAATCATAGGAATCATTTGATT
TTTGGTGCAAAGGTGCAAAACGGTGGTGGCCAAAATGTGACGGAGCCCGA
TTTTCGAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAAT
TTTTTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGGTCAAGCAGATT
TTAGTAAAAAAATTTTTCAGCTCAAAAACGCATCTTTATCTATAAGAATC
ACTATTATTAAGCATACATCAATGTTCTTAGCCAAATTACTCAATTTTTT
GATGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
AAATTTTGGTTTCTAAACGTTTTTTTTATAAGAAACAAACGACTAATTTT
AATAAATCGTCACTATTTGTGTTCTGAATGATTGTTTAACGTTCATGCTC
GCGTAGATATCAATTATATATGTGTTAAATGCATAACCAGGTAGTTCCAT
AAAAGTATCACTTGTTTTCATAGATGTTGATTGACCAAACTGACCGTCGT
GTGTCACAAGCCTTAGCCAAATACGATTTCTTCTTCATGCCCGTGTTTAA
CATTGATGGGTACAAATACACTTTCACTGGAAGACAAGCACGTTTATGGC
GTAAAACACGAAAACCATACTCTTGGTATCAGTTTCCATGTAAAGGAGCA
GATCCCAACAGAAATTGGGACAGCCATTGGGATGAAGGTTTGAGATGTTA
TTATCTTTTCAGGAATTAATGTTTTTGAAATAAGGTCTCTACCGAATGCT
CGAATAAAAAAGAGATGGATTTTGCGTGTTGACATTTTTTTTAAATCAGG
AATACCTAACGTCTGGTTCCATTTGAATTAATGAGAAAAACTTTCGATGT
AAGAAGGATATTCTCTTTGTTGTTATTCAGCAATTGGGACCAGCGATTTT
TGTATGTACGAAAATTACCGCGGCCCGAAACCGTTCTCGGAAGTGGAAGT
GGCCAACGTGGCAAGGTTTCTGAAAACGTTGAACTTGAAGTCTTATTGGA
ATGTCCATGCTTACGGTCAATATGTTTTATATCCGTGGTCCTGGACCAAA
AAGCCGGCACCCGAAGCAGCTCAAATGGTAGGTTATCATTTCGAATGGAT
TCTGTATAGTGAAAAGTTTTATAAATTCTATTTGTTATTTATTTTGTAGA
CTGGCACGCCAGTCGGGCTGGAACGGTATCACGCGGGAAAAGTGAGCGTA
GGAGTTAGGTAAGCGTAGGAAGAAATTTTGTCGGCGGTGAGGGCTGAAAG
CCCGACTGGAGCGAAACCCCAGGAAGGAAAAAACGGCTAAGCTGAAGCCC
CAATCTTACAACGCCAGATTTCGGCGTTGTAGAAATGAATGAACTTTGAG
AAATTCATGAAATGAGAAATGAAAACTTCCGTCAAAGTCGCAGATCGTGT
TGTTTTGATTTTTGAGGAGGGAGTGATTGGAAAAAATAATGGCTGACTTC
TAGTGGAAATTTTTATTTGAAAAGATTTTGTTTTGTTTCTTGTTTCTTAT
TGATGAGTCTCTTCCTTGTGTATATGTGGCTTTTCTTCATGGTTCTCTGC
ATGCAAAATTCTTTGGCTCATTTTTGATTGTTTTTTGTTTTGATTTGAGA
GGTAAGAGAAGATGGAAAATCTTGTAACATCAGTTATCAGAACTTGTTGA
CTTGTTATCTTTTCCTATTCATAACTCATTCAATTTTAGGAATGGAGTAT
TCAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACTTTTCT
GTCACCATATAAACTCTGGATTTTCTATCAGAGCTATCTTATCACAGCAC
TAAATTCTGCAAATTTCAATTTTTCACAAATTAAATTTGTACATGAATGA
ATTTGTACACTTAATTATAATAATACAGTTATAATAATAATTATGCACCA
ATGTGTCATTGTTTTGAGGTTGGAGTTTTAGTTATTCAACATATGACATC
TTAACTATTAAAAGTAAGTATTTTTCTGTAAGTTTTCCATTTAATTTTCT
ATGTGTACGTGTAATTTTCCTGTGCTTGGCTGGTACGTTACATGCTGACA
GTCAGGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGCTCTCCTACGCAGCTCCTATTCTAGCAAACGCCTGCCGC
CTTTATGTTCCCGCCCTCTGACATGATTAATTTACAGACTAGTTTGCTAG
TCTATTTATTTTGTTGATTTGTAATGCGTTCTTCCAGAAAAAAAACTAGC
CGGGATATATTTTCCGGGCCTATTAAAAAAATGTCATAAACTTGTCATGT
CTGGCGGAGGTAAATTTAGAGTTAAAGTTTTTCCTATTCCAAGCTTTTCT
TTTCTTTCAGAAAAACGTGGGTGATGTTTTTGCAGCAGCTGCTCGCTTAC
GGTATGGAACACTCTATCAAGTTGGACAACCTGCAGACATCTTGTGTGAG
TTTTTTTCATTTCTTTATTACATTAAAAATCTTTTAAAAAGTTAAGTTAG
ATGTCTAAGAAGGCTGTGAAGTCAAAATATTGTTCATAAGAAATGTGTTA
TTGTTTTAATGGTTAAATGCAGAAGAAAAAATGATAAATAAATGTTACAA
GGAACAACCTTGCGAGAAAAGTCTTTCACTTTTTTCATTATAATACATAC
TATGTTGGTTCATTCACTTGTTCACCTTTGAATATTCATCTTTATCAAGA
ACGATGCGTTTCTCATGCCAAATTTTTTCAGTGTCATATCTAACCAAATA
AGCTTTTTATCCGCAGTCCGCACGGGTTTGCGCCATTTGTTTCTTGGAAC
ATTGAAATACCACTTAATCGTGCTTTCGAAAGGAAGGTTTAATATTTTCT
GTTCCTCACTTTCTAGTTGCACTGTCTTATTTGAGTCTCCAAATGAATTT
TTCAAACAATCACTATAAATCACCAACTCTTTGGAATCCTCAGATAACTT
TAGATAAAACCAGCGCATACTGAATGGTTCATAGAGAACTCTCAAGAGAG
TGACCAAGAAAAATGCTTGGCTTCAAATCTGAACGCTTCCCTAACCAGCT
CGCCTTGTTCAAGGTAAAAAACCTGTACGGCTATTGTGAAATATTCTTCA
ATAATAAGCAAACAATGACTGCGTGGTGGACGAAAAATTGTGCTGAAGTT
TTTGCCGGTATGATCGAACCCCGCCGTAGAATATTCGAAGGGTGGTTTTT
CGCCGACCATATCCACATGATTTTCTTGTCGCCATTTTTCAGTTATCTTA
AATTCCTGCGTGTCAAATTAATGGAAGAAAGAACTGTTTTTGTACTTTCT
TCGAAGAAGCTATTTTTGATTTGTTTTGAATTGAGAGGGATAAATTGGAA
CGTCGATGATTTAATCATGTAGCCCTGATCATGGGCTTTCAGAAAATTAT
ATGGTTTAGTTTGTTTAAACCAACCGTTGGCGAGATATAACGATTTTAAA
ATCGAAAAAGAAGTGCTGACTCGGCAAAAATAAGCGTTTTAAACGATTTT
AAAATCGTTATATCTCGCCAACGGCTGATCTCAACATTTTACACCATACA
ATTTTCTGAAAGCCCATGATCAGGGCTACATGATGAGCATGTCGATGTTC
CAATTTATCGCTCTTAGTAAAAATGCTGACGTCATCAAAATTGTCATTTT
TTGGACTTTAGAGGTTATATCTCGGGACCACGTGGTCCAAATTTCAAAAG
TGACCCCATTTTCTTTATATACTCATCGAAAGGAATCTCCCTGTCTAATT
ATTTTTGACATTTGAAAACCATTAAAAATCAGTTATCAAGGGTCCCCCCT
TGATTAATTGTAGAAAAAAGTACCGTCCGCCATTATGGATTTGAGGGTGT
TCCCATCTCCCTGGGGGTAGAGCTTTTCTTTGGTGATTCCTGACCTGTTC
CTTGACCTCTGTGCAAAATTTCATCTCTACACCGTTTTTGTCCGGGTATT
TATGCAATTGTACTGGAGCCTTATCCGCGTGCTGGCCTAGCAGACGAATA
AGACGCAGTGGGTGAGTGAGTCTAGACTACGAAAGGGACGGGCTAGAGGA
ACCTAGGAGAGTAGAACCTAATCCTATTTGCAGACAGGAACGGGAGACTA
TAGTGCTATAAATAAGAAAAGGATACTTACAAACCTATGTCCTGAGCAGG
TCCGCCGCCGATCGCTGCCGAAACAACACTAAAGTTTAGGAGGGCTGGAC
AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGTTAGAAGGGCGCTAGA
TACGATCAGTAAAGGTATAGCCGAAGGAACTTTAGTACACAATTCTACCT
GACTATACCACTGGTGTAAAAATGAACGTTGTAGCATAAGTAGAAAAAAA
GCTCAATTTTTGCAATCGCAAATTCAACCGCTAAAAATTGCGAATTTTTC
AACCAAAAATAAATTCAAATATAGCGCTTTTGATTCTCTAAAACAAGCAA
AAAAAAATTTCGCAATTATATCGGACTATCAAAAGTTACAGGCATTCTTG
TTTCTACTGCCAATTATATCTTGATACACTTTAGCGATTTTCTTTAAAAA
ACTTAGAAAAAAATGACCGTGGCACTTAAAGAGTTATAGCCTCACTCAGT
TGAAACAGCTTTGCTTCGATTACCCAACAGTTTTTGTCAGCAGTTTACCC
CACTGTTGATTTCTCTTTATTGCAGACGCTGTATCCGGAGGAAGTATCGA
TTATACTTATGAAAAATTGGGTGTCGTCTACTCATATGCTTTGGAACTTC
GTGATACTGGTCGCTATGGTTTCGTCCTCCCAGCTAATCAAATTCAACCA
AGTGGAGAAGAGACTAGTGATGCTTTCTTAGCCGCTGTCCTCGCTATGAA
ATAATTTGTTTTTTTGTGAGAAAGAAATACAACTAAGAGATTGAATTGAA
AATTATTTTTCATTTTTATTTGATATATGCAGTAAGATTTGATATTAGCA
AAATCATTAGATGCCGAGCTAACGAAAATTTTAAGTAATTTTACGGTCTT
TAGTTTGTAAAGATCTTAAAACATTATCTCGGGAAGTTCGAAGCTTAGCA
AAATCTTATTTAGACTACAGTATGTGGCCCCCAAAACGGCGATCAAATTT
GAAATTTCTCTCAAATCTAGAGGAAAAGAGATTTTGAATACAAAATTTTG
ACCATAGCTTTGAAATATGATTTAGAGGGTTTTGGGCATAAATTTATTTG
ATAAAATGTTTACAGTATACCCCCGGTTGTCAAAATGCAGGTTTGGGGCC
CCCAAAACGGAGGTGTAGTTAAAATCAAATTATTAAGCCCAGGGGTAGTA
GGGGGAAAAACTATGAACCTATTTTTGTTTCCCCTTAAATTTACGACCCG
ATGGATGTAAAATTTATGATTTTTATGAAATATTTCAAGATTTTCGATAT
TGCAAAGTCCAAACTGAAAATTTAGANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNACAAATCTCTTTTGAAAATAGTTCCATTCATGT
ATGGAATAAGCTGTGAAAATTTTAGAAAAAAAGCTTAACTGAAACTGAAA
ATATTAAGCTTCAAAGATATTTTTCTCCTATGTTTTGCAAAAAAATGACA
GAATTTGCTGTTTTTGCTGATTCAGCGAAAAATTTTATATACAATGTTAA
TTTTTTGTCATAAACTATTAACTCAAGGTGATAGGAATAGAATTCCAAGA
TTTTTTGCTTTTTCTCATATTTAGAATTTTCGGTTTTTGTCAATGCTGAT
TCTAGGGCTCCAAAATACTGGTTGACCTTCAAGATGCTATATCTTTTACC
CATCCTCTAAAGTTACAGATGTATTTGCATTTTCTGAACGGCATTAGGTG
TAGAAAGTTTCCTATACCCCGTTTTCATAACTTATTTTCAATATCCAAGG
AGCTAGAGTGAGCTATATGCAATTTTTATCTAGTTTTGGTGTTAAAATAT
TTCCTTTGGACGCAAATATGTTATTTTCAATCTGTCTCAAACCAGCAAAA
ACATGCTCATTTTTAAGTATAACCATCATTCTTTCAAAATAAACAAAAAT
CGTTTAATTCTGATAAATCTAAAAGTCAGAATCTTCATGTAAGAATATTT
CAGGATGATATTTCTCAAAAAGTATTCATAATGAATTGAAAAAACACCAT
TCTTATAAAAAAACGTGTATGTGAAACAAAAAATGAGTGTTTCACCCCTT
CTCTTCACGAGGTGTTTTACTTTTTAAAGTTTCGAAGATTTATTAATATT
TCACCATTGTTTGAGCTTATTACTTTTAGATTAAATTTCCAATAAAATGT
CAACAATTTGTTCACCTTTCGAAAAAGAGGTTAATGAATTCGAATCATGA
GCAAATTTTGCACCCCACCACCACCCCCTACATGAAGAAAATAAACGTTA
CGTAAGGTTATGTGTTCTTCAAAGGAGTTGTGAAACTTTCATCCTTTTCC
TTTATGCTTTAACATGATACCTCACGCGACTTTTGAATTACAACCCCAGC
TGAATAAGCTTTCATACGTCAAATTGAGTTTGATTCAGAAAGGTCAAATG
TTGAAAGTTTTTTGGTCCCTTTTATATTGAAAGTTATACCAAGATATCTG
ATGATTACACAACGTCTGCACTTTGCACATCAATGTTCGTCTTGAGATAT
TTCAGGCTTTTCTAACTGAAGATATGACCCGATGATAAACCCTCACAGAA
AGCCTCCCGAGATAACAAAAGAGGTCTGTATGTTTTTAATTATTGATGTT
TGCAAAAAAATGCTTTCGACATTTATTGATACAGATTTAGTAAGAATCAA
ATTGATCTTCTTCATTTTCATTTCAAATTGGTTATTTTATTTATGGCAGC
TGAGTCAAAGTTTTCTTCATCTCTGACTACTATATAAATTGTTACAACCC
CATTTACTGAAATACATTTTGTCGTTGGGTATCAAGGGAGAGAGAGAAAA
TGAAGACCCTCATTTCTCTCGCGTTTTTTGTCTTGGCTGTTGCAGCTTAT
GAAGAATTCAGAGGGTAATGAAATTTTTCCTTTGTTTTCTTTTTTGTGTG
TTCTTTGGTTGGGAAGCACTAAATGTAGCCTCCCTTCTTTTTGCTTTTTA
GAGACCAAGTCATCAGAATCGAACCAAAGAGCGTGGCTCATCTCGTCATC
TTGAAAAAATACATCGAATCTAACAATGACGTGAGTTTTGTTTTGTTTTG
ATTTTCCAGTCTTCTCCAATTCTCTGATCATTTGGTTAGCATAGGAGAGC
TTGAGGTAAAACTGAGAATAAGCCTAAATTATTTTTGTTCTTTGAAAATT
ACTTCAAACCTTCTTGTATNAATGTCAACAATTTGTTCACCTTTCGAAAA
AGAGGTTAATGAATTCGAATCATGAGCAAATTTTGCACCCCACCACCACC
CCCTACATGAAGAAAATAAACGTTACGTAAGGTTATGTGTTCTTCAAAGG
AGTTGTGAAACTTTCATCCTTTTCCTTTATGCTTTAACATGATACCTCAC
GCGACTTTTGAATTACAACCCCAGCTGAATAAGCTTTCATACGTCAAATT
GAGTTTGATTCAGAAAGGTCAAATGTTGAAAGTTTTTTGGTCCCTTTTAT
ATTGAAAGTTATACCAAGATATCTGATGATTACACNTTCATCTGAATTTT
TATAAAAATAGAGACCACCCTGAGCAAATAAATACTCATGAAAAAGTGAA
AGATAGGTGACATGAAGGACATCATTATGACATCCTAAAGACGCCACAAC
GAATGCAAGGTACTCTATATCTTTCACAAAATCTTCCTACCAAGAGTTAT
TCTATCAATTTGATGCAAAGATGAAGATGAAAATATTTTTCTGTTTTGTT
GTTTCGTTTTTCATTGTAAAAGCGTACGAAGAATTCAGAGGGTAAGGCTT
TAATCTTTTCAATGTTTGACGAACAAGACATCTTATTGAATCATTGTAAT
CTTTCTTTGACCTCAACATTTCCAGGAACCAAGTGCTTCGTATCATCCCA
TCCAACGATGTTCAACTAAAAGTTCTCAAGAAATGGATTTCAAGCAACCC
TTTGGTGAGTGTCCTTTTTTATTAGAAAAGAAGAGAAGAAAATGGGAATA
ACGAAGGAACTTGATTTTTACAAAATTGATTTGCAGGGGGCCAGAGTGTC
CTAGGTTATAAAATATCAAAAAAAAATGCTTATTAGTTTCCTGCAAGATC
TTTTCTCTTGCATACCTTAGGTTGATCTTTGGAAAGAGCCAAGTGCACCT
GGCCACGTTGTAGACATCCACATGCCAAAAGGAAAGATCTCATCTTTCGA
GAAATTGTTGACAGCCCATGGAATTTCTTATAATATCATGGTCCCTGATG
TGGAAGATCTTTTGAATGAAGAAGAACTCTCCAACATGAAGAACAGCTTC
TATTCTTCTTTTGACTACAATAAATATAACCGTTGGTCTGATGTAAGTCG
AAGTGTTCTTATGTTCTTATTCATTTTATGAGAAATTAAAAGAACAAAAA
TTATTTCAAGTAAGCAGACTTTTTGTTTCAATAATCAATACATCGAAAAA
ATTTCGAATTTAATTCTTGTCATTTTCTTTTTTTAGATCAAAATGGAATT
ACAAAACTTGGCTCGTTCTAACCGAGGAATAGTCTCTTTGTTTCAAGTTG
GACGAACTTATGAAGGAGAAACTATGATCGGCCTTAAGGTTAGTTTCCCT
TCGAACAGTTTTCGCTTCGCAACACCAATCGGTGACATTAGACCACTGTC
TGGGCAGTAAATAAAGCTTTTGGTAAAAGGACGTACAAAAGCCAAGCTTC
TATCTTATATTAATCTGAGCTCAACACGGTGTTTTTGCCCTCATCGGACC
AATTGAGCTCCTTTATATGAACTAACCTACCACCACACCTTATTTTTTTT
GACAGGTGACAAACGGTGACGGGCGATCAAAACCAGTGGTTTGGATTGAT
GGAGGTATCCATGCAAGAGAATGGATTTCACCCGCCACTGTCATGTACTT
CATGAACAAGGTTAGAGGTTTTAATTTTGAAAAATGAGAACTTTTTCTGG
ACTATTGCAGCCTTGTTGCCATGACTCTTATTTGATAAACTACGATTGTA
TCTCTATCTAACTTCAGCTTCAAAATTTAGGGCTGCGTGTTTCTTATGTA
AGAAAGTTTTATACTAAACTTCAACATTTAAGCATTCATTGAAAAATATA
TTTCTTGTAGATGATTACTCAACAACGATCAGACAATCGTGTCGCACAAG
CCTTAGCCAAATACGATTTCTACTTCATGCCCGTTTTCAACATTGACGGA
TACAAATACACTCACACCGGCCGACGTGCCCGTTTCTGGCGTAAAACACG
TAAACCTTACGGATGGTACTGCTACGGAGCTGACCCTAACCGTAACTGGG
ACAGTCACTGGGAAACTGGTATGGGTTATCAAAAATTATTTTCCAGTGCT
TGGGGTGACCATCAAAAACTTGTATCTCTCCTTTATCTGAATGGACTTAC
CACATTGACACCTTTCTAAGAAACTCCGGGAGCTATTTCCAAAACCTTTC
ATTAGCTTAAACGATTTCTACACTTCTTTGTAAATTAAAAGTAAAGAAAA
TAGGAAATCATTGAAATCATTAACCGGAAATATTTCCCCAGGTGTCGGAA
CAAGCTCCAACTGTCAATCCGATGTTTACAGAGGCCCACAACCAGCCTCC
GAAGTTGAAGTTCAAAACGTTCAAAGATACCTTGGAGCACTGAACTTGAA
ATCATACTGGAACGTTCACGCTTACAGCCAACTTGTCTTAACACCATGGT
CGTGGACCACCACTCTCCCAAGAGATTACTCGGAAATTGTAAGTTGTCAT
GTCCTTACGCCCCTCAAATAAAACAATTTTAATCCAAGTTCAATCTCCTT
AAAAATGGAAGTGACCATCTTTCTATCACTAAAATTCTCCCAGGTAGAGT
CGACAAGTTTGTCCTTTTTTAATATTCTTTGGAAATGTTAGGCTACGTCA
TATTGTTTTTAAACTGTTAAATCAGGTCCAAATCGTTGAACTGTCCATAG
TTTATGCTACAGAAATACGATTCCAAACAATCACTATAATCTTTGGTTTT
CATTTTTCCAGAAACGTGTTGGAGATGTTTTCGCCAATGCTGTCAGTCGA
CGATACGGAACTCAATACAAGGTCGGACCTCCATCAAGAATCTTATGTAA
GCTTCCGTAATTTTATATAATCTTATGTTCGAGCATTAACATGCTAGTAT
CGTGATCAATGATCTCCATTACGAGACCTTTCTGATCATAGTTTGAGCTA
CTTTTAGTAAACTTGTCGTCAAGAATTGAACTCACTCATTCATCTTAAGT
AGATCTGGATAAATTTCTTCTTGCGATTTCATCATTTCTTGATCTTTAAG
TATGACGTGCGTTAAATGCCGTGATTGAGAGACGTGCTGCTTATTTCGAC
CCTTAGATGGAAATATTTTGATTTCTGTTTTTTTTTGCAGACGCTGTATC
CGGAGGAAGTATCGATTATACTTATGAAAAATTGGGTGTCGTCTACTCGT
ATGCTTTGGAGCTTCGTGATACTGGTCGCTATGGTTTCGTCCTCCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CTCTTGCCTAAGTACCCACGGGCTGCCTTTTTTCGACGAATCTCGTGTCA
TGTCTATAATTTCACTCCTCTTATCTTGACATCAAAGTTTTCCTAATTCA
TCAACAAGTACGGCAAATGTAAAGCGAGCGAAGCGAGAAAAAAATCTAAT
TGCAAAGCCTTTTCGGACGTCGCAGGTTGCCGGTATGGTATAGTTTGAAT
AACGCCCTTTCTGATCATTTTTGCAACAATTTAAAAATCTTTTTCAAAAT
ATGGTTAAAAGATACGTGACCTGGGAGTGACAGAGTCAAACTTTGAAGAG
ATTTTTCCCTTTAATTTTGACTTCATCGTATTTTAAGCCAGCTTCCCAAC
ATCCAAAGGACTTTAAAATGCGTTCAGCAACAGCTAAACCGGCGTGCGAC
GCCGGGTACCGGCTAGTTTGCTTTAAAGGGCTAAGAGCTGTTTAAAATAT
TACCGTGATTGGCTTTGTGAAACAAAAAGAAGGATTGCCGATTTTTTTTT
TTTCACTTTACCAGATCAAAGAAGAGCTGCTACATTTGTCACGGAAACAT
TCCTCAAAAGCTTTTTTGTTCAACGTCGGCAAAACTTACGAAGGAGAAGA
TCAGATTGGCATCAAGGTTAGTGTGGAGTTCTTTATTGAAGTGTAGATTC
AAGAGATAGTACCTTCACTATTTAACTTAACCACCATACGTTATCTATTT
GACAGGTGACAAACGGTGACGGGCGATCAAAACCAGTTGTTTGGATTGAT
GGAGGTATCCATGCAAGAGAATGGATTTCACCCGCCACGGTCATGTACTT
CATGAACAAGGTGTGTTTTGGGTATTAGGTGTTGTTTTTCTTCTTCTTTC
CATGTTGCCAATGATCGACGAGGAAAGGTTTTTTCTTATTTTCTTTCGTT
TTCAGTTGCTTACAAACAAAGCGGATGATCGTGTGTCAAGAGTCTTAGCC
AAATACGATTTCTACTTGATGCCCGTTTTCAACATTGATGGGTACAAATA
CACTTTCACGAATCGATCAACTCGATTGTGGCGCAAGACAAGGACAAAAT
ACAAAGAAAGTAAACCACCTTATAAAACGTGTTACGGAGCAGACCCCAAC
AGAAATTGGGATAGTCATTGGGAAACAGGTACTCTATAATACCTTTCCAA
CTTTTTATTTCCGTGCCTTGTAAAGGAAATTACTAGTGACTAGTTTGGGG
AGATTAAAGTAAAATGTGTACCCTCTGTTAGGGTTAGGGTTAGTGTACCC
CTGTTTCAGTGACACTGAATTTATTTTAAGTTAGTGAGGGTAGAGTAGTG
TCGTAGTTAAATAACAATTGACTAAACATCGCCATACGTGGGATGAATGG
GATGTAAATTTTAGGGGATCTCAGAACACCAGGTCCAGATCTCCTTTAGC
CAGTAAGGAAGAATGGAAAGCGAAATAAGTAAGTGACGTGGTGCTAATCT
GATAGTTAATAACTGTACTTTATTACAGCTCTTCTTTCCAAAAGCATCAA
TGTAAACTTTCAAACCTTATTTTCTAAGTATGATACCGCTCTTCAAATCA
TAGTATTGGAAACTGTGTTGAATTCAAAGTCAGTTGTACAATAAATTTTC
AAACCCACGTTCCCTTGTTCAGGTATCAACGCCAGTGACAATTGTACAAC
AGATTACTACAGAGGGCCTTTTGCAGGATCTGAAAAATGTGTTGCAAACG
TCCAAACGTTTCTTCGTCAACTGAAGAACTTAACTTCGTATTGGAATATC
CATGCTTTCAGTCAGCTTGTCCTCACAACGTGGTCTTGGACGAGCGCCCT
ATCGAAAGATTATCCAGAAATTGTAAGCCTTTCAATTTTGCAACACGTTA
AATTATAATCCATAACCAGCCGATAATTTTAAAAACAACAAAACAAAAGA
AAGTCCGAAAAGATTCATTCTGACATCAAAAATCTTGAAGTAGCAGACGA
AGTAATCTCAAGTAAAATATGCAAATTTTTGCAAAGATTTTTGCCTGAAT
GATGTATTAGATAGAATACGAAATATAGCATATTTTACTTGAGATCACTT
CGTCTGTTACTTCAAGATTTTTGATGTCAGAATGAATCCTTTCGGACTTT
CTTTTGTTTTGTTGTTGTTAAATTATAAATTCATACAATATTGACAAAGA
CGTGTTGTTACACGCATCTTGTGTATTAATATTTTATTCTTCCTGGCATT
CTTTCTACTTGTCACATTTAAGTAAGTTGCTCTCATTCTTCATTCATGTT
TATTGGACTTCCAAGAGACGGTAACATTGGTTGCAGATCAATATATCAAT
CGCCCATAACCATCCTTAGCATTCTTCTTTTTATGTATAGAAGCGTGTTG
GAGATGTTTTCGCCGAAGCCGTCAGTAAAAGATATGGCACACATTATAAA
GTTGGTCCACCTTCAAGATTTCTGTGTAAGTATCCTTCAATGTTTCAAAA
GCCTGGTTTAGACATTTCATACATTCTATACGAGCCTGATCAGGCCAACT
TAAGTTTTAAGTGTAAATGATGCAAATCAATTTGACTTGAGGAGTTGGTG
AGTCAAAACTTGAGAAAGAAGTTAATAATCAACCATCACCTCTTCATCTC
TTTCGTTCAGACCCAGCTTCAGGTTGCAGTATTGATTTCGCACATGATGA
GCTGAAAGTCGTCTACTCTTACGGTCTAGAACTGAGAGATAAAGGCCATT
ATGGTTTCGTTCTCCCAGCTAATCAAATTCAACCAAGTGGAGAAGAGACT
AGTGACGCTCTACTAGCCGCTGTCCTCGCCATGAAACCAGAATATCAAAT
GTTTTCCTCTTCGAGAGCAACCAGGATACGATTCCTCAATGATCCAGCAG
TTTTGTTTATTTTAGTATTTCTATCTAATCTTTTCATATATAGAAATTGT
TCATAAATGTAAATATTTTTTGAATTATCTTACCTTAGGGTTCAGAAATA
CAGGCTTGAAATAACCTGATCTACACATACCCATGTCCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004604XLOC_004604Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008191-exon-sc0000082-1575043694:568782..568881TCONS_00008191-exon-sc0000082-1575043694:568782..568881Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1575043694:568558..568662TCONS_00008191-exon-sc0000082-1575043694:568558..568662Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1575043694:550854..551076TCONS_00008191-exon-sc0000082-1575043694:550854..551076Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1575043694:550160..550359TCONS_00008191-exon-sc0000082-1575043694:550160..550359Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1575043694:549557..549641TCONS_00008191-exon-sc0000082-1575043694:549557..549641Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1575043694:548991..549371TCONS_00008191-exon-sc0000082-1575043694:548991..549371Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1510915933:568782..568881TCONS_00008191-exon-sc0000082-1510915933:568782..568881Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1510915933:568558..568662TCONS_00008191-exon-sc0000082-1510915933:568558..568662Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1510915933:550854..551076TCONS_00008191-exon-sc0000082-1510915933:550854..551076Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1510915933:550160..550359TCONS_00008191-exon-sc0000082-1510915933:550160..550359Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1510915933:549557..549641TCONS_00008191-exon-sc0000082-1510915933:549557..549641Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1510915933:548991..549371TCONS_00008191-exon-sc0000082-1510915933:548991..549371Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1491911889:568782..568881TCONS_00008191-exon-sc0000082-1491911889:568782..568881Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1491911889:568558..568662TCONS_00008191-exon-sc0000082-1491911889:568558..568662Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1491911889:550854..551076TCONS_00008191-exon-sc0000082-1491911889:550854..551076Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1491911889:550160..550359TCONS_00008191-exon-sc0000082-1491911889:550160..550359Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1491911889:549557..549641TCONS_00008191-exon-sc0000082-1491911889:549557..549641Clytia hemisphaericaexon
TCONS_00008191-exon-sc0000082-1491911889:548991..549371TCONS_00008191-exon-sc0000082-1491911889:548991..549371Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:548991..568881 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	9.69798	8.63637	0.77657	0.459191	0	0.000147138	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5.21802e-08	0	0	0	0
Blast
[Close]
BLAST of TCONS_00008191 vs. Swiss-Prot (Human)
Match: CBPA4 (Carboxypeptidase A4 OS=Homo sapiens GN=CPA4 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.482e-65
Identity = 111/283 (39.22%), Postives = 176/283 (62.19%), Query Frame = 2 
Query:    8 ELENLVSIYSSKASLFNVGKTYKGEEQIGIKVTNGDGRSKPVVWIDGGIHAREWISPATVMYFMNKLLTN-KADDRVSRVLAKYDFYLMPVFNIDGYKYTFTNRSTRLWRKTRTKYKESKPPYKTCYGADPNRNWDSHWETGINASDNCTTDYYRGPFAGSEKCVANVQTFLRQLKNLTSYWNIHAFSQLVLTTWSWTSALSKDYPEIKRVGDVFAEAVSKRYGTHYKVGPPSRFLYPASGCSIDFAHDELKVVYSYGLELRDKGHYGFVLPANQIQPSGEET 853
            E++N+ + +   A    +G +++      +K + G G  +P VW++ GIH+REWIS AT ++   K++++ + D  ++ +L K D +L+PV N DGY YT T    RLWRKTR     S+ P  +C GADPNRNW++ +  G  ASDN  ++ Y GP A SE  V +V  F+++  N   + ++H++SQL++  + ++   + D  E+ +V  + A+A++   GT Y+VGP    +YPASG SID+A+D   + +++  ELRD G YGF+LPANQI P+ EET
Sbjct:  132 EMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQ--NRLWRKTR-----SRNPGSSCIGADPNRNWNASF-AGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCTTVYPASGSSIDWAYDN-GIKFAFTFELRDTGTYGFLLPANQIIPTAEET 405
The following BLAST results are available for this feature:
BLAST of TCONS_00008191 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBPA41.482e-6539.22Carboxypeptidase A4 OS=Homo sapiens GN=CPA4 PE=1 S... [more]
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