TCONS_00008186 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008186
Unique NameTCONS_00008186
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length807

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008186 ID=TCONS_00008186|Name=TCONS_00008186|organism=Clytia hemisphaerica|type=transcript|length=807bp
GTTGCATGGCTCCGCGGACGAATAAATATTCATTCAGGTAATCTTGGACG
CTTGACCAGACCAGAATCAAAATGGCGTCGCAAGTGGCAAGAAATGTCAG
GAGAGTTGGCAAAGGTTACATTACTCGTCCGAGAGTCAAGACTCCAGCTG
ATTATGGTGGTCTTATTAAAGATCCAGCGATCGAGCGATGGATGACGATG
AGGGAAACGACCACGCCCCATTTCAAATGGACACCTAAATCTTTTGGATT
GATCGCTTTTTGGTGTGGAGTGGTTCCTTACGCCATGATGCACTACGTCC
ACCAAGAAGTGAAAGACAGACTGGAAGCTGAAGGAAAAGAAGCCCGATTT
TTCCCTTTCTCCGACGAAATGCCATCACGTAGACCGGATCCGTTACCTCC
CCGTAAAGCGGGCGTTCAAATCGACCATTTTTGATATTctgatattaaat
tttttttcttaattgtatatttttatgaatATGAAAGACGTGTAGTTTTC
CCAAAAAGAATATCCTTTTTCTTAGAATTTCTGATGATGATGAGCTTCAT
TTACTGTCTTTTTCATAAGAccttgttaaaataaaatggaaaaaatggag
TCCATCTAAGCAAATCAAGGGTTTTGACCATATGTTCAACTTGTTATCTA
TCATATCTATCATATTGTCAACTTGTGAACAAAAGTGTTTTCGTGtgcat
tttcagattttgtttttgtaacAGCAGTGTAATGAATCattcttattttt
aaaagagATAAAACGGTTTGGGAACTTTGGCCTACAGTTGCCTTCTATGG
ATCTGAT
Run BLAST on NCBI

protein sequence of TCONS_00008186-protein

>TCONS_00008186-protein ID=TCONS_00008186-protein|Name=TCONS_00008186-protein|organism=Clytia hemisphaerica|type=polypeptide|length=120bp
MASQVARNVRRVGKGYITRPRVKTPADYGGLIKDPAIERWMTMRETTTPH
FKWTPKSFGLIAFWCGVVPYAMMHYVHQEVKDRLEAEGKEARFFPFSDEM
PSRRPDPLPPRKAGVQIDHF
Run BLAST on NCBI

transcript from alignment at sc0000082:538271..547603-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008186 ID=TCONS_00008186|Name=TCONS_00008186|organism=Clytia hemisphaerica|type=transcript|length=9333bp|location=Sequence derived from alignment at sc0000082:538271..547603- (Clytia hemisphaerica)
GTTGCATGGCTCCGCGGACGAATAAATATTCATTCAGGTAATCTTGGACG
CTTGACCAGACCAGAATCAAAATGGCGTCGCAAGTGGCAAGAAATGTCAG
GAGAGTTGGCAAAGGTTACATTACTCGTCCGAGAGTCAAGACTCCAGCTG
ATTATGGTGGTCTTATTGTAAGTCAATATCTTGATGAATATTTCTTCTAA
GAATTACAGAACTTTTTTAACCTGAATATTGTTTACTTTTTTAAATTTGA
GACTTTCTTTTTCACAGCCTCACTATCCTCCAGACGATCTCAATCGAACG
GAATCGACGATCGAACCAGTCGAACCAAATCGAACGCAATCGACCGATTG
AAATTCGATTGTCGAACGCAATCAAATCTCAATCGAATATTACCACAATT
TTCAGATTCGATTGATATTCGATTACGTTCGATTGATGTTCGATTGCATT
CGATTGCGTTCGATTGCGTTCGATCGTCAATTCATTGACCCCCGGATTGT
TCATCGCATAATTTCTACGGGAAATCGAAAGTAATTTCATTCGGCTTGTG
ATATTTGACAGTTAGTCACACTAGCGTCCAGCCAAAATGCATATCAAAGA
TTAATGCTGCGCAAGCTCTATATTGTTTACTTGACTCTCAAGCAAAAAAA
TGTGCCGCAAAACTTCTAAAGGGATTCATGAAAAAATAACCCGGCGCATT
TTAATGAAATTAACATTTTTAAAAACTTTGAGAAATTGCCTAAAATTTGA
GTCATAGAAGAAAAAATTTGAGCCAAGCCAACCTTGAAAACTAATTTGAA
GATCAACTTCCCAAGAAAAAGATCTACGGGAGAGGCGGAACCCACCTAGA
TCCACGCACCGCCGGATAGGCTATTTCCCGGAAATTTTGCCGGACCTCAA
ACAGTGACCGATATACATGTGCGGATTTGTTTTTACTTTAGCGTATAAAC
TAGGCCTTAAAATTCAAAGCGCTGTCTCGGGAATTGAATGACAAATTTTG
GTTGGTTGATTTTGGCTGCTGTAAGTTCGCAATCTGTCATTTTGTCTCAT
TTTAAGTTTTCAAGTTTTAATTGATTGTCTTGGGATCTTGAATCTGATTC
AGGTAACTCTCATCCTTGTTGTTAAAATACATCCTGTAGATGACTGATGT
TGTTTTTTTCTGAAAGCTTAATTTCCTAGTGTGACTAACTGTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGCGTTCGACAA
TCGAATTTAAATCGGTCGATTGCGTTCGATTTGGTTCGACTGGTTCGATC
GTCGATTCCGTTCGATTGAGATCGTCTGGCTATATTCCAGTTGTAATCGA
TGATTGATTAAAATCGATAGCTAATCAATATTAATTGATGAATTAGATAT
CAATTAAAATTTATAATCGATAGCTAATCAATATTCACAATTTTTTTGTC
CTCAATTAGCTACCGTCAACTGCTCTAACTTGGGAGGATTGGTCGAAACA
TGTGACTGGTTGATATCTGGTCACTGGTCTGTATTTTCACTTACTGTTAA
ATCTATTTGACAACAAATTTGTTTTGATAACTCCACCAAGTTTATCAATC
ATACTTCTTCGTTCCTCTTAGAGTGCACAGACACTCGCGTGTGTTCCACT
ACGGATTTTTTTTATATTTCGATTTAACAGCTTACTCAGTCCATTCAGTT
AGGAACATTTGGCGAGTTCCTGTACGCGGCCGCAATCAAAAAAATCATAA
CCACACTCATAAAAAAATTGTGTTTGTGTCTTTTTTTACCGTTTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAGACATAAGTGTGAGAACAGAGTAATCAAACT
CGTTAGAAAAAGTACCATTAGAAGTCATAAAAAATCAACTTGAATAAATG
CAATCGAAATTCCAGAGACCTTCATAATTCCCCAAACAACATTACATTAC
TATTTCAAACTCCCATCACATAAATTTTACAATTACGTCAGAGTAGACTA
CACTCGCCACCGAAGAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTGAAAG
TTTGTCTCAGCCTTTTTATAATGAGCGAGACATACGTTCTCTGATTACGC
AATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTGTCAGTCCAG
TGCGAAAGAGAAATCGTGTATTTTTTAATACGCCGTTCATTAACTCAAAT
CAAAATGACTTTGGAGGTTCGGTGAAATGGTGGCTGAATTGCCATCCCAT
GTTTTGTCAGATAGTCCCAAGTTGGAGCAGTTGACGTATCGATTGATATC
GATCCAAATCGATATCGATTATTAATCGAATGGAATCGATGGAATCGATA
CCATAAGGCTGATGGAATTTAATGTTATGTTTACCGTAAGCCGCCCGCAT
GTTCAAAAACCTGCCGCATGACGTTGTCATTAATTGCAATTTTTTTGAAA
AGTTATCATTATTTTCCCTTCGTCCTGCACGAGAGAGAAAATTTTGTCTT
TCAAACGAGCTTTTGACTGTTTAAATCAAAACAAACAGCCCAAGGCCTTT
TAAACTGGACAGGCGAACGGCCCTTAGTATTTGCTGACACCTTGCGCAAT
CAGTTTTATAATATTGCGGAGATAAGATTGTATAATTTCTAGACGGAAAG
AAAAAGCTTTTCATCTCTTTTAACCTCAATAAAACAGGAATCCAAAGAAT
TGATTAAAAACACACGAGAGGTCATCAAATTCGGAAAGTGGATCTTACGA
TAAACTTGAAATCCAATTCCATCGGCCTAAGGGATCCTTGACAAATACAT
ATACAGTAACAGTAAAAATATTTCTTATGTTCACTATTTTGTTGTCACTA
TTAATATTATGAGAATCGTTTATTCATTTTTTCTTTAGTTCTGTAATAAT
TTTTCAGTTTCTTCTAGGTTCCCCATTGTATTAGAGAAATCTATTTTTTT
TTGTAAGGGGTTATCCTGCTGTGTTGCAGCGAAAATATATTCAATTCAAT
TCAAAAAACTTTCGAATTTTTTATCGGCATTGCCCAATTAGGGGGTGGGG
GGTCCAACTACATACCGATAAAAAAACAAGTATTGGGACGAAAATCCTTT
CAGCCAATTTCTTTCTGATTTCGTCCACAAACTCCACTAATAGCAACTCC
GGAAGATTTTTCAAATTTTAATATTTTTTTCAAAATCTATCCTATCTTGT
AGAGCTTTGAAAAGAAAGAAAATGAGGGGCCATAGGCCTCTAGAGGATAT
AAGTGGTTGTAAAGATATTCAAATTTTAGTGAAAATTTGACTAAAAATGT
CAAAAAAAAGGTTAGGAAATAGCTTGGAAAAATTCGAAAAATGTGTATCT
TTGTATTTCTTTTTTTGAAAAAAGAAGACATTGCATTGTTTTATTTTTGT
TTTCAAAAAAAATAGCTTGGAAAAGGTTGAAATGAGTCAAAAAAGGTGGT
AGGACCCATTTTCAAGGGGTCTCTGGAAATGGAGGAACAAAGTTATAGTT
ATAAGTAACTTAAGTAACTAAGTAGTAAGTCGGTCAGTCATTTTATGAAA
AAATTCAAAGAACAGCTTTGCAAGAAAAATATCCCTCTAAAAATGAGAAA
ATTCTTATTTGCTTATTACACTCCTGAAATATCCTAAAGACTTAACTGGG
TTTTTGTATACATTCTTTCGAAATATAACCATTTTTCAAACTGTGTCAGA
TTTTTAAATAACATTTTACTCTTTAAACTAAGTAAACAATTGATTGAATC
TTGACTGTTTGACTACTCTCTAACTGAAGAAGAGAGTACCGGGTGTCCCA
GAAAAAAGGCCTCGTCTTTGAAGTGAATTTTCTCCATTTCTATCAACTGT
TTGAAGAATCAACCATTTTGCATCATGGAAAGAGAAGGGATAAACTTCCC
AAAATATGAGGGGTTGTTTGTCAAATTTGATCAACTAGATCAAAAGTTAT
GGTCCAAATACTAAAACATTACTTTTCAAAAAAGTCGAAAAAAGGCAAAA
AAAGAGGGTTTTAAATCTATTGTAGGACAGAGACACAAATGTTGTTTATT
CAGCACTTATTTATGCGATTTTTAACCATTCCTGTAAAGTGTTTCAAATT
ATTTTAGGGTCGAGATTAGCTGCAACATTTCTGATTGAAGCTTTCAATTG
ATCAAGGGTTGCAAATTTGGGGTTGCTCCCGGATCTGTTGTTTCCTGTAA
CCCCACAAAAAGAAATCACATTCAGTGAGATCAGGCAATCTTGGGGACAT
CTCCTTGATTGTTGACGGCCTTTGGAAATTGGATACGAAGAGAACGAAGA
AACTTTGATTGTTAATAAATTGATAAAAGAAGTGCTTTTTTATGATGATT
TAATGCCCTCGTTTTTCGCCTTTTCTTAACTTTTTTAGAAATTAATGTTT
TAGCATTTAAACCATAACTTTTGATCTAGTTGACCAAATTTGACAAATAA
CCCCTCATAATTTAAGATTATCCTTCCTTTTTCCAATGCTAACAGATTGA
CTCTTTAACAGTTGATAGAACTCGAGAAAATCTACTTAAAAGAGGGGGAC
TTTTTTTCTGGGACAACCAGTAGGATAAGTGGAAGAAGGGGCATAAAGTC
CTCTTTTCCTTGGCTAGATCTTGTACTTCACTACGTCTGAAACGATTACG
TGCTGAGTCGACCGAAATTTGGGCAAACTGGGGAGGCAAATTTGGTATTT
TGGCACCCCTTATTAAGAAAATTATCGGGGACAGGGCGATTCCCTTATTT
GCCTCTTCTCTATGTAAAGGATATCAGGGGAGACAATTGAACTCAGAGGA
ACATTCTAGAGTGCAATCTAATTTTCTTTGGGCAATTGTTCTGGAATATG
CCACTCCATTTTATATTTGTACAGGGGGTGTTGACGAACATTTACAGGGA
TAATCGGAAAAGAATTTCCAGGGGGTATAAAGTAGTATTTTTCATTTTTC
CAGGGTGTGAAAAGTTATTCTAAAATGTCCAGGGGTTGAAAGACTGATTT
AGTTCGTCATCACTCACTTTTAAGATGTGAAAAGAATTTTCCCAAGGTTT
CTTTTGCAAATTTGCCATTTTCCACGGGGTATCCGCATATTTCTAAGAAT
TTTTTTGCTTTAAAAATTTTTGTGCACCCTCCTGTATTGAAATTTAATGA
AACAGCCCTGAAACCCTGAAACTTTATGATTTAGGTCAGAGTCACCATGT
TACCACGTGTACATCAGCTATCAAAGGAGTGTGACATTCTTACATATCTT
TGTTTTTGCAGAAAGATCCAGCGATCGAGCGATGGATGACGATGAGGGAA
ACGACCACGCCCCATTTCAAATGGACACCTAAATCTTTTGGATTGATCGC
TTTTTGGTGTGGAGTGGTTCCTTACGCCATGATGCACTACGTCCACCAAG
AAGTGGTATGTTCTTTTCATTTGTTGTTCTCAACTTCAGTTGAGCTACAA
TCTGAGAATGTCTGTCTGTCTTTTGATGGCATTCAAAAATTGCGTGAGGT
TTTCAAAAACAGCAAAAAAGAAGAAATTTGAATATCCTTTTTAAAAATAA
CTCTTTTCAAACGAAACTTCACAGTATTGGTTCTAAAGGTGATATAAGTA
GGTTGAAAATTTTTTTTTTGTACAATGGGCCAAAACTGCGGCACAAATCA
AGAAAAACACTATGTTGATAAAACAGCAGCCACAAATTTGTTCAATGAGT
AAAAATCATTTTTTTCAGATGAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCAGAT
GAAACTCGTAGCAAAAGGGTTTATCCACAAAATATCAAAAATGGAACCAA
AATCATTGGGTCACTGGGCTAGAATTGCGGCTCAAAGTTGATGATTTTTT
CATATATGCTTTGATTGAAGACACATTTTAAGCCCATTGAAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGTACTACACA
GCAGCCACAAGAATATCAACGCTGTGGGCTAAAAAGTGGCTGTGATTGAA
AACCTCACTTTTTGGGGTTCTATTTTTGAATGCAATCTTTTCAAAATTTT
GATTTTTAAGGGCTTGGTCACGAGTTTTAGCCTCAAAACTTTGGGGCAAG
CTGGAGATTTCAAAAATGGTCGGATTTGGCTGAAATGCTGCACACTTGTT
CCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAATTTTGAT
TTTTGGGGCCTGGAGACGAGTTTTTTGCCAAAACGGGGAGGAAATTTTCA
TATTAGGGTCTACTTAGAGAAAAAGTTATCTTGTATCAAAAAAATTTCTG
TTGCTGTTTACAATTGGGCCTACGAGCAGGGGGGGTCATGCAGTTGGTAC
CAGGCATCATGATGACTAACTGCAAAATTGAAAATTTGAGAGCACACCCA
CCACCCCTTAGCAGTTAGTACCCAAAAGTACTAAGTGCATTTGCCTATTG
ACAGGTTGACACCACCTCTCTTTGCACTCAGTACCCCCGAAATACTAAGT
GCCTTTGTTTGACTACTTGCAGGTTAACACCACCCCTTTTTCCACCTAGT
AACCCGCAGTACTAAGTGCATTTGACTATTTCCAGGCTGACACCACCTCC
TCTTCTGCCTTGTTTAGTGATTTTGAGTGGCTGAAACTCAAGGTAATCAA
TTTTTGAAACCTGTTAGTACCCTGGGGTTGACACTAACCTTGGTAATTTT
TCTCTATTTGATTTATAACAAACACAAAGCCTAACATATATATGATACAA
AGCTACTAAATAGTGTCCTAGTAGGTTGGTTCCCCTCCCTTGAAAATTGA
AAAAAAATTCTATTTCCCCTCTTTTAGTCCCCCTCCCTAAAGTTTTTAAA
ATAATCCCCCTCCCCTTGAAAATTTTTTTTGATTTTTTGCTCATAACATA
ATACTGCTTCTATTCATGTTATCTCGTCCCTATAATATAAAACACTATTA
CATGTTTTTAGCTTGAAGTTGAACAGATATATTTTATGTTTTATGTTTGA
CACCAGAGAACAGAAAATTTTTTCCTCAGATTTTTTCTCCCCACCCTTGA
CTTTTTGGAGCTATTTTTCTCCCCCTCCTTTTGATTGCGGGCGTCCCCGA
GTCTCCTTTTGTTTGCGGGCGTCCCCGAGTCTGTGACATGGAGATGTTTT
TTGATTATCAAGCTTTTTGGTTGTGTTTTCGTATTATTTATAGTCAGCTA
GGATGATCAATATGTTTTCGAAACTCCCACATGAGAAAACAACAAACTCA
TAGCAGTTCGTTTCGGCCAATTTGAAGGTTTAAAATAAATTGTTAATGAG
AAAGGTCGAATGTAAAGTGTTTCTGAGTACCTCGAGAAAGCAGCCGTTAC
TTATGTAATTTATGGTGATTTTTTCAACAGGCGAATACCTTTTCGTTCGC
TCTGCAGTTCTGCTTCTTTTTCAGTACCAGAACTAGAATAAAGAAACTGC
TTTGTAAAACACTTAACTTTCCTTTTTACGATTCCAGAAAGACAGACTGG
AAGCTGAAGGAAAAGAAGCCCGATTTTTCCCTTTCTCCGACGAAATGCCA
TCACGTAGACCGGATCCGTTACCTCCCCGTAAAGCGGGCGTTCAAATCGA
CCATTTTTGATATTCTGATATTAAATTTTTTTTCTTAATTGTATATTTTT
ATGAATATGAAAGACGTGTAGTTTTCCCAAAAAGAATATCCTTTTTCTTA
GAATTTCTGATGATGATGAGCTTCATTTACTGTCTTTTTCATAAGACCTT
GTTAAAATAAAATGGAAAAAATGGAGTCCATCTAAGCAAATCAAGGGTTT
TGACCATATGTTCAACTTGTTATCTATCATATCTATCATATTGTCAACTT
GTGAACAAAAGTGTTTTCGTGTGCATTTTCAGATTTTGTTTTTGTAACAG
CAGTGTAATGAATCATTCTTATTTTTAAAAGAGATAAAACGGTTTGGGAA
CTTTGGCCTACAGTTGCCTTCTATGGATCTGAT

Coding sequence (CDS) from alignment at sc0000082:538271..547603-

>TCONS_00008186 ID=TCONS_00008186|Name=TCONS_00008186|organism=Clytia hemisphaerica|type=CDS|length=1089bp|location=Sequence derived from alignment at sc0000082:538271..547603- (Clytia hemisphaerica)
AAAGACAGACTGGAAGCTGAAGGAAAAGAAGCCCGATTTTTCCCTTTCTC
CGACGAAATGCCATCACGTAGACCGGATCCGTTACCTCCCCGTAAAGCGG
GCGTTCAAATCGACCATTTTTGAAAAGATCCAGCGATCGAGCGATGGATG
ACGATGAGGGAAACGACCACGCCCCATTTCAAATGGACACCTAAATCTTT
TGGATTGATCGCTTTTTGGTGTGGAGTGGTTCCTTACGCCATGATGCACT
ACGTCCACCAAGAAGTGATGGCGTCGCAAGTGGCAAGAAATGTCAGGAGA
GTTGGCAAAGGTTACATTACTCGTCCGAGAGTCAAGACTCCAGCTGATTA
TGGTGGTCTTATTAAAGACAGACTGGAAGCTGAAGGAAAAGAAGCCCGAT
TTTTCCCTTTCTCCGACGAAATGCCATCACGTAGACCGGATCCGTTACCT
CCCCGTAAAGCGGGCGTTCAAATCGACCATTTTTGAAAAGATCCAGCGAT
CGAGCGATGGATGACGATGAGGGAAACGACCACGCCCCATTTCAAATGGA
CACCTAAATCTTTTGGATTGATCGCTTTTTGGTGTGGAGTGGTTCCTTAC
GCCATGATGCACTACGTCCACCAAGAAGTGATGGCGTCGCAAGTGGCAAG
AAATGTCAGGAGAGTTGGCAAAGGTTACATTACTCGTCCGAGAGTCAAGA
CTCCAGCTGATTATGGTGGTCTTATTAAAGACAGACTGGAAGCTGAAGGA
AAAGAAGCCCGATTTTTCCCTTTCTCCGACGAAATGCCATCACGTAGACC
GGATCCGTTACCTCCCCGTAAAGCGGGCGTTCAAATCGACCATTTTTGAA
AAGATCCAGCGATCGAGCGATGGATGACGATGAGGGAAACGACCACGCCC
CATTTCAAATGGACACCTAAATCTTTTGGATTGATCGCTTTTTGGTGTGG
AGTGGTTCCTTACGCCATGATGCACTACGTCCACCAAGAAGTGATGGCGT
CGCAAGTGGCAAGAAATGTCAGGAGAGTTGGCAAAGGTTACATTACTCGT
CCGAGAGTCAAGACTCCAGCTGATTATGGTGGTCTTATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004603XLOC_004603Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008186-proteinTCONS_00008186-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008186-exon-sc0000082-1575043694:547437..547603TCONS_00008186-exon-sc0000082-1575043694:547437..547603Clytia hemisphaericaexon
TCONS_00008186-exon-sc0000082-1575043694:541449..541592TCONS_00008186-exon-sc0000082-1575043694:541449..541592Clytia hemisphaericaexon
TCONS_00008186-exon-sc0000082-1575043694:538271..538766TCONS_00008186-exon-sc0000082-1575043694:538271..538766Clytia hemisphaericaexon
TCONS_00008186-exon-sc0000082-1510915933:547437..547603TCONS_00008186-exon-sc0000082-1510915933:547437..547603Clytia hemisphaericaexon
TCONS_00008186-exon-sc0000082-1510915933:541449..541592TCONS_00008186-exon-sc0000082-1510915933:541449..541592Clytia hemisphaericaexon
TCONS_00008186-exon-sc0000082-1510915933:538271..538766TCONS_00008186-exon-sc0000082-1510915933:538271..538766Clytia hemisphaericaexon
TCONS_00008186-exon-sc0000082-1491911889:547437..547603TCONS_00008186-exon-sc0000082-1491911889:547437..547603Clytia hemisphaericaexon
TCONS_00008186-exon-sc0000082-1491911889:541449..541592TCONS_00008186-exon-sc0000082-1491911889:541449..541592Clytia hemisphaericaexon
TCONS_00008186-exon-sc0000082-1491911889:538271..538766TCONS_00008186-exon-sc0000082-1491911889:538271..538766Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:538271..547603 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
256.116	268.614	305.975	330.894	200.736	174.682	206.857	216.721	190.777	185.653	163.43	152.238	115.332	120.388	125.286	130.51	230.923	211.126	88.9234	90.8082	213.268	212.526	173.868	146.94	162.237	159.857	153.588	133.7	112.535	107.41
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009866NADH_UbQ_OxRdtase_NDUFB4_su
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008186 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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