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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008152 ID=TCONS_00008152|Name=TCONS_00008152|organism=Clytia hemisphaerica|type=transcript|length=1331bp caaaaagacaaaaaagaatgAGTCCTAGCGACGTAAATAAGGCgggaaaa ataaaatataaaatgtaaacaaatcacttcatcactttcgttttcctctt ttttttgaCACTAGGCCATTGCTTCGGGCATTAATAACGATCATCAAATC ATGAATCCAACTTTAGCAGAAAATAGCATTTATCAGAAATCAGATTACAT AGACCAATGTATCCAAACGATgaaagatttatcaaaagtaCAACCGGCTC GGCGTAAAAGAAAGCATACCGCAGAATCTTGGACAGCGAAGTACAAACAG TTGGAAATCTTCATTTTGAAGGATCTCAAGAAAGAAGAACTTCGTTCGTC CATCAAGAAAGAAACTGCAATAACAAAACCCTCAAAGAAAAGAAAGGCAG CCACCGAAATTTCACTTCTAGCAAATGCAGCATTTCCTGATGATTTGGAT GTGTCATTTTATCACGGAGAAATGAGCGAtgtttcattttcactgaataC CACGACAAATGATCACGTTGTCCCGGACACTTCATCGGCGAAGCTTTCTA CTTTTTGTAACGATGTCGAGGATCCATTGATAAGTGAAGAGCAAAATATA AAAGACAAATGTTTTGGCAAAGTAAAGACACCTTCAAATTACGTGAGCAA GTTGCCTTCGCTCAAAGGGAACCAATCAATCTCTTTCAACAGACAGACTT TACATTCCAATATCTTAAAAACACCTGTAATACAAAAACCGCATTATTTG ACAAAAGAGCAATTTACATCTCCTGCTTGCGTTTCGATTCCAAAAATACA GAAGTTAGTTCCACAGACTCCAAGCATCCCACCAAGAACACCATATCTTG GTTCAAACCATCGACAAAACAGTGGCTTCTCAGTTCCAGAAACTCCAGCA CTCCTTCCGAATAACAGGGTCACTATTGTCAAAGAAACACCGATGATAAT GCAACATCGTTGATACAAGAACCACCATGGATTCTGTTTGTTGGAGTTGG ACTCAAAGTAGTTTCGTTGTTTGAATATTTTACCGCGATTTATATGTAAT TTGTTGCGTTTATGTCCTTGTGGTTTTTTCTTGTTTGTGTAATTTTATTT GATGTTGAAATCTGATATGGTATGAAATTATATGGTTGCAAGCTTAAAAA TCCAgtgagatggttttggagtgcaattttttatatAGTCTATTTTCAAG AGGGGCTGAATTTGTAGTCTATTTTTCCCATCGAGgatgaaattttggcc aaattttccagtgggttatTAGGGGGTCCAAGCGGGCCTGTGACACAATC GTGCACTTCTAATAAAGATTGAAAAGATTCG Run BLAST on NCBI protein sequence of TCONS_00008152-protein >TCONS_00008152-protein ID=TCONS_00008152-protein|Name=TCONS_00008152-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MNPTLAENSIYQKSDYIDQCIQTMKDLSKVQPARRKRKHTAESWTAKYKQ LEIFILKDLKKEELRSSIKKETAITKPSKKRKAATEISLLANAAFPDDLD VSFYHGEMSDVSFSLNTTTNDHVVPDTSSAKLSTFCNDVEDPLISEEQNI KDKCFGKVKTPSNYVSKLPSLKGNQSISFNRQTLHSNILKTPVIQKPHYL TKEQFTSPACVSIPKIQKLVPQTPSIPPRTPYLGSNHRQNSGFSVPETPA LLPNNRVTIVKETPMIMQHR Run BLAST on NCBI transcript from alignment at sc0000082:181426..185921- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008152 ID=TCONS_00008152|Name=TCONS_00008152|organism=Clytia hemisphaerica|type=transcript|length=4496bp|location=Sequence derived from alignment at sc0000082:181426..185921- (Clytia hemisphaerica) CAAAAAGACAAAAAAGAATGAGTCCTAGCGACGTAAATAAGGCGGGAAAA
ATAAAATATAAAATGTAAACAAATCACTTCATCACTTTCGTTTTCCTCTT
TTTTTTGACACTAGGCCATTGCTTCGGGCATTAATAACGATCATCAAATC
ATGAATCCAACTTTAGCAGAAAATAGCATTTATCAGAAATCAGATTACAT
AGACCAATGGTAAGTCAAAATAGCATTTCATTTTATCCATTCATACATTA
AAAATAGGTTTTCCCAGTGGGGGGATCATTAATTCACCAGTGTGAAGGTG
TGAAGTTGCATGCAGTTTTGTGACCTTATTCTCGCTAGCTTCGACCTTTT
AAGGCTGTCTTAAAGCTATTTCAGTTTTCATTGAGCGAAACTTTAATCCT
ACCGTCGCGTCAAAGTTATAGTACCCTATTTTAAATATTTTTGATTCAAA
GTCTTCATTTATATTATATATCTTCTTCATCAAATTGTTTCATTGCGATT
TTTAAATTTTCAGATTCGAGGATATTTGGCCTAATAGAAAATGTATTAAA
TGCCAAAGCTTTGCGGGCTACATCATGCAGAATCTTATTTTGCACGTACC
AAATGGGAAAATTCACTATAGCCAGCAGAGCCCTTAAATGTTAAATGACT
TTGAGTTTTCAGAACTACCTACCTTGCAAATTATTAATACTGCAAACACC
CTACCATGTCCCAAGTTAAGACGGTCTTAGCATAGCAGGGTAGGCCTGTG
CCTTGATTTCGAAAGTGGGCCAAAAGTCGGGGACTCCAGATTGCATTACA
TTTTTGTTGGGTTTTTGAGTGGTTTTTGGTGTTTGTGTTTATGTGATTGC
TGTATTTGTGTTTCTGCTTGGCTTTTTAAACTTTATGTCTATTGGTTTGT
TGTTTTTTTTCGCATAAAATTCTCATTTCTTGACAGAATGTTTGATTGGT
TTGATTTATATATTTAGAAAAATTCAAAAAAATAGAAAAAAACGTATAAT
TATAAAAATATTATATAGTCCGTTTTTAGGTTTCATCTTTTCAACACTTG
CTCTCCATGAGGTCAGATCTCTGATCTTCACCATATATATATTCCAGGCC
CGGCGGAAGCGCGGAGACTTCAGCCTCTCCAGTTTTGAGCAATCGAGATT
CTTTTCCCAAATTCCTAGTGAAGTTTATCTCATTTTGAGGTCTTAGCCAG
CCTAGCCCCACTTTTACGGTTGTTCCGCCGGGCCTGTATTCAAAAAGGGT
AGGCTAGAAAGAAGACCTTGAAGTGCTATTTTTTACCACAAATAACTTGT
TTACAGAGAAATAAAGATAAAAGTAGGATTCTCTAACCATCGTTGCTAGC
CATCGTGTGTAGACATTTGAGTGTGACTTTGAAAGATTTTGAAAATCTTT
AAAAAATATTTAATGTGAAAAGTGAAAATGAAGTTTGAGTCTACTTTCGA
AAAACATTTTCCTTAATCTGAAGAATATGGAGTCGAATACATAAGTTTTC
TGCACTCTATTGTTTGATTTTAGTCATGGGTACTAATCAGGGGGCAAAGA
TTACAAAAAACCTCATATTTTAGGCTGAGAATATTGATGCGAATCTAAAA
CGTTATCCCCCGGAAAACGATTTACAGAAATCTAAAATCGCTAGTGAAAA
TCAAAACGCTACAGAGAAAGGCTTCAGACACGTAAGGCTATTAATATATA
GATTTTTAGAAATCTAACCACTTATTACCAAGAAGCTAGAGGAGTTACTA
GGGGCTACAGTTGGCAGATGACGTATGTGCAAACGTTACCTTCCAAAACT
GTCCAAAATCGACCGTTAGAAAAACTAAATTTTTGTGAGAAAGTGACCCT
AAGTAACATTTTTGAAAAAATTTCTTTGATTTTCGAATAGTTTTCTACCC
TTAGTGCAATTTTTCCGACCCTTAAAACTTGGAGAGGCTACTTTGAAGTT
TTCTGAAATTTGTACCCTAGTCTTAGAAGTGGATAACTTACAATTTTTGC
GAATTGATAATTTGAAAATTAGAAAATTAGACTCTTTCTAATCTAAGCGC
TTTCACTTTTATGTTTATTGGCCAAAATTTGGATTTGTGCTAAAAATTTA
TTTTTATTGAGCTGACAGAGATTCTACTGACTACTGGACATCCATCTTTT
ACTGTCTCTTTGAAGCGAGCTTCTTTGCAACCTGTATTTCAAATCCGACA
AAACTCCTCCCCTATTTTTTTCTCATTTAGTTCGCAATTGAAAAATTTTT
GATACAGTTCATATAAATTTTAATATCTGATTATCGACCAAAGATTCGTT
AGACTCTTTCTCTCTAGCTCAATTATTTAGAGACAGCCGAGACCATTGCG
TAACTTACTTGGGACTCTAAAAGTCGTCCCAATATCGATGGTTTTAATAA
TACGAAAATGGGCATACACCCCTTAGCTTTAGATGGTAGTGTCTCAATAC
ACTTTGATGCTGCAGCTTTTGGTTATTTGAGATCTATTTTACCATCAGTG
CAAATTGTATCGGATCGACTTGTTTTAATGATCATTGATGATGATCCAGT
CATCGAGAATTCACCCCAAATTTTAGATTAATACGGGCTCCAGACATAAT
TAAAGAGAAAAGAGCTGGCAAGAGTCTTGATAGATAGCCCTTCGAAAACC
AATTTTTAAATAGGCCTGCCTACACGGTAAAAGGATTCGATTTTCACAAA
CTGGACTAAACTTTAGTAAATGCAGTTTACTTAAATTACTCTTAGTATCC
AAACGATGAAAGATTTATCAAAAGTACAACCGGCTCGGCGTAAAAGAAAG
CATACCGCAGAATCTTGGACAGCGAAGTACAAACAGTTGGAAATCTTCAT
TTTGAAGGATCTCAAGAAAGAAGAACTTCGTTCGTCCATCAAGAAAGAAA
CTGCAATAACAAAACCCTCAAAGAAAAGAAAGGCAGCCACCGAAATTTCA
CTTCTAGGTATGATATGTATACTTTTGAAAACATCGCGTAGATCTTTCAG
TACACAGAAATCTTGCACTATGTTGCGAAAATTACTCTCGCGAATCAGGC
AAAAAATTGCGTAAATGCGGAATTTAATCTCGTAAAAACCAATCACACGT
GTAAAATTCGATTAAAGTAGCCATAGTAAATTAGAATTTAAACATTTTTT
GGAATATTGTGAATTCGTGGATTCGTCTTGGACTTTCAAAATAAGTTGTC
ATCGTTAATGTGTGTCCTCGTGCTTCTGCGTGAATCACACAAATCAAATT
GAATTTCGCTTTTAAACAAATTTCAGCAAATGCAGCATTTCCTGATGATT
TGGATGTGTCATTTTATCACGGAGAAATGAGCGATGTTTCATTTTCACTG
AATACCACGACAAATGATCACGTTGTCCCGGACACTTCATCGGCGAAGCT
TTCTACTTTTTGTAACGGTATGTATTGTGGATCACTTTTTTGAAATTCTG
ACCCTTGGCTCAATATCGAAGATGGGGTCAGGAAATAAGAAATCAAGATT
TGTAGAGAAAGAAATTTTAAAAATGAGCCATATTGAAGTTTCCGAAAGAG
GTTTTTAAGGTTCTAACTCTTCGTGTATCCTGAGGGCCCCTTGGGGGAAG
GGGACACTGTACTACCTTGTGCTAGGAAAATCCTTTGAGAATATATTTAC
GGCAATAAGAATTGAGACAGGGATGTATTTTCTTCAAAATTTGTTATGTT
ATATGTCTACTTTCAACTCAATTTTAGATGTCGAGGATCCATTGATAAGT
GAAGAGCAAAATATAAAAGACAAATGTTTTGGCAAAGTAAAGACACCTTC
AAATTACGTGAGCAAGTTGCCTTCGCTCAAAGGGAACCAATCAATCTCTT
TCAACAGACAGACTTTACATTCCAATATCTTAAAAACACCTGTAATACAA
AAACCGCATTATTTGACAAAAGAGCAATTTACATCTCCTGCTTGCGTTTC
GATTCCAAAAATACAGAAGTTAGTTCCACAGACTCCAAGCATCCCACCAA
GAACACCATATCTTGGTTCAAACCATCGACAAAACAGTGGCTTCTCAGTT
CCAGAAACTCCAGCACTCCTTCCGAATAACAGGGTCACTATTGTCAAAGA
AACACCGATGATAATGCAACATCGTTGATACAAGAACCACCATGGATTCT
GTTTGTTGGAGTTGGACTCAAAGTAGTTTCGTTGTTTGAATATTTTACCG
CGATTTATATGTAATTTGTTGCGTTTATGTCCTTGTGGTTTTTTCTTGTT
TGTGTAATTTTATTTGATGTTGAAATCTGATATGGTATGAAATTATATGG
TTGCAAGCTTAAAAATCCAGTGAGATGGTTTTGGAGTGCAATTTTTTATA
TAGTCTATTTTCAAGAGGGGCTGAATTTGTAGTCTATTTTTCCCATCGAG
GATGAAATTTTGGCCAAATTTTCCAGTGGGTTATTAGGGGGTCCAAGCGG
GCCTGTGACACAATCGTGCACTTCTAATAAAGATTGAAAAGATTCG Coding sequence (CDS) from alignment at sc0000082:181426..185921- >TCONS_00008152 ID=TCONS_00008152|Name=TCONS_00008152|organism=Clytia hemisphaerica|type=CDS|length=3252bp|location=Sequence derived from alignment at sc0000082:181426..185921- (Clytia hemisphaerica) ATGTCGAGGATCCATTGATAAGTGAAGAGCAAAATATAAAAGACAAATGT TTTGGCAAAGTAAAGACACCTTCAAATTACGTGAGCAAGTTGCCTTCGCT CAAAGGGAACCAATCAATCTCTTTCAACAGACAGACTTTACATTCCAATA TCTTAAAAACACCTGTAATACAAAAACCGCATTATTTGACAAAAGAGCAA TTTACATCTCCTGCTTGCGTTTCGATTCCAAAAATACAGAAGTTAGTTCC ACAGACTCCAAGCATCCCACCAAGAACACCATATCTTGGTTCAAACCATC GACAAAACAGTGGCTTCTCAGTTCCAGAAACTCCAGCACTCCTTCCGAAT AACAGGGTCACTATTGTCAAAGAAACACCGATGATAATGCAACATCGTTG ACAAATGCAGCATTTCCTGATGATTTGGATGTGTCATTTTATCACGGAGA AATGAGCGATGTTTCATTTTCACTGAATACCACGACAAATGATCACGTTG TCCCGGACACTTCATCGGCGAAGCTTTCTACTTTTTGTAACGTATCCAAA CGATGAAAGATTTATCAAAAGTACAACCGGCTCGGCGTAAAAGAAAGCAT ACCGCAGAATCTTGGACAGCGAAGTACAAACAGTTGGAAATCTTCATTTT GAAGGATCTCAAGAAAGAAGAACTTCGTTCGTCCATCAAGAAAGAAACTG CAATAACAAAACCCTCAAAGAAAAGAAAGGCAGCCACCGAAATTTCACTT CTAGATGAATCCAACTTTAGCAGAAAATAGCATTTATCAGAAATCAGATT ACATAGACCAATGATGTCGAGGATCCATTGATAAGTGAAGAGCAAAATAT AAAAGACAAATGTTTTGGCAAAGTAAAGACACCTTCAAATTACGTGAGCA AGTTGCCTTCGCTCAAAGGGAACCAATCAATCTCTTTCAACAGACAGACT TTACATTCCAATATCTTAAAAACACCTGTAATACAAAAACCGCATTATTT GACAAAAGAGCAATTTACATCTCCTGCTTGCGTTTCGATTCCAAAAATAC AGAAGTTAGTTCCACAGACTCCAAGCATCCCACCAAGAACACCATATCTT GGTTCAAACCATCGACAAAACAGTGGCTTCTCAGTTCCAGAAACTCCAGC ACTCCTTCCGAATAACAGGGTCACTATTGTCAAAGAAACACCGATGATAA TGCAACATCGTTGACAAATGCAGCATTTCCTGATGATTTGGATGTGTCAT TTTATCACGGAGAAATGAGCGATGTTTCATTTTCACTGAATACCACGACA AATGATCACGTTGTCCCGGACACTTCATCGGCGAAGCTTTCTACTTTTTG TAACGTATCCAAACGATGAAAGATTTATCAAAAGTACAACCGGCTCGGCG TAAAAGAAAGCATACCGCAGAATCTTGGACAGCGAAGTACAAACAGTTGG AAATCTTCATTTTGAAGGATCTCAAGAAAGAAGAACTTCGTTCGTCCATC AAGAAAGAAACTGCAATAACAAAACCCTCAAAGAAAAGAAAGGCAGCCAC CGAAATTTCACTTCTAGATGAATCCAACTTTAGCAGAAAATAGCATTTAT CAGAAATCAGATTACATAGACCAATGATGTCGAGGATCCATTGATAAGTG AAGAGCAAAATATAAAAGACAAATGTTTTGGCAAAGTAAAGACACCTTCA AATTACGTGAGCAAGTTGCCTTCGCTCAAAGGGAACCAATCAATCTCTTT CAACAGACAGACTTTACATTCCAATATCTTAAAAACACCTGTAATACAAA AACCGCATTATTTGACAAAAGAGCAATTTACATCTCCTGCTTGCGTTTCG ATTCCAAAAATACAGAAGTTAGTTCCACAGACTCCAAGCATCCCACCAAG AACACCATATCTTGGTTCAAACCATCGACAAAACAGTGGCTTCTCAGTTC CAGAAACTCCAGCACTCCTTCCGAATAACAGGGTCACTATTGTCAAAGAA ACACCGATGATAATGCAACATCGTTGACAAATGCAGCATTTCCTGATGAT TTGGATGTGTCATTTTATCACGGAGAAATGAGCGATGTTTCATTTTCACT GAATACCACGACAAATGATCACGTTGTCCCGGACACTTCATCGGCGAAGC TTTCTACTTTTTGTAACGTATCCAAACGATGAAAGATTTATCAAAAGTAC AACCGGCTCGGCGTAAAAGAAAGCATACCGCAGAATCTTGGACAGCGAAG TACAAACAGTTGGAAATCTTCATTTTGAAGGATCTCAAGAAAGAAGAACT TCGTTCGTCCATCAAGAAAGAAACTGCAATAACAAAACCCTCAAAGAAAA GAAAGGCAGCCACCGAAATTTCACTTCTAGATGAATCCAACTTTAGCAGA AAATAGCATTTATCAGAAATCAGATTACATAGACCAATGATGTCGAGGAT CCATTGATAAGTGAAGAGCAAAATATAAAAGACAAATGTTTTGGCAAAGT AAAGACACCTTCAAATTACGTGAGCAAGTTGCCTTCGCTCAAAGGGAACC AATCAATCTCTTTCAACAGACAGACTTTACATTCCAATATCTTAAAAACA CCTGTAATACAAAAACCGCATTATTTGACAAAAGAGCAATTTACATCTCC TGCTTGCGTTTCGATTCCAAAAATACAGAAGTTAGTTCCACAGACTCCAA GCATCCCACCAAGAACACCATATCTTGGTTCAAACCATCGACAAAACAGT GGCTTCTCAGTTCCAGAAACTCCAGCACTCCTTCCGAATAACAGGGTCAC TATTGTCAAAGAAACACCGATGATAATGCAACATCGTTGACAAATGCAGC ATTTCCTGATGATTTGGATGTGTCATTTTATCACGGAGAAATGAGCGATG TTTCATTTTCACTGAATACCACGACAAATGATCACGTTGTCCCGGACACT TCATCGGCGAAGCTTTCTACTTTTTGTAACGTATCCAAACGATGAAAGAT TTATCAAAAGTACAACCGGCTCGGCGTAAAAGAAAGCATACCGCAGAATC TTGGACAGCGAAGTACAAACAGTTGGAAATCTTCATTTTGAAGGATCTCA AGAAAGAAGAACTTCGTTCGTCCATCAAGAAAGAAACTGCAATAACAAAA CCCTCAAAGAAAAGAAAGGCAGCCACCGAAATTTCACTTCTAGATGAATC CAACTTTAGCAGAAAATAGCATTTATCAGAAATCAGATTACATAGACCAA TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00008152-exon-sc0000082-1575043694:185713..185921 | TCONS_00008152-exon-sc0000082-1575043694:185713..185921 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1575043694:182965..183176 | TCONS_00008152-exon-sc0000082-1575043694:182965..183176 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1575043694:182505..182645 | TCONS_00008152-exon-sc0000082-1575043694:182505..182645 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1575043694:181426..182194 | TCONS_00008152-exon-sc0000082-1575043694:181426..182194 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1510915933:185713..185921 | TCONS_00008152-exon-sc0000082-1510915933:185713..185921 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1510915933:182965..183176 | TCONS_00008152-exon-sc0000082-1510915933:182965..183176 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1510915933:182505..182645 | TCONS_00008152-exon-sc0000082-1510915933:182505..182645 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1510915933:181426..182194 | TCONS_00008152-exon-sc0000082-1510915933:181426..182194 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1491911889:185713..185921 | TCONS_00008152-exon-sc0000082-1491911889:185713..185921 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1491911889:182965..183176 | TCONS_00008152-exon-sc0000082-1491911889:182965..183176 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1491911889:182505..182645 | TCONS_00008152-exon-sc0000082-1491911889:182505..182645 | Clytia hemisphaerica | exon |
TCONS_00008152-exon-sc0000082-1491911889:181426..182194 | TCONS_00008152-exon-sc0000082-1491911889:181426..182194 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000082 | supercontig | sc0000082:181426..185921 - |
Blast
The following BLAST results are available for this feature:
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