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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008136 ID=TCONS_00008136|Name=TCONS_00008136|organism=Clytia hemisphaerica|type=transcript|length=1728bp tttattttttattaaaagttctCTTGGGTAAATTAAATTTCTAGTCGAGA TttccttcattttcaaatttaatcacTAACAAGGGAGGTTGGTTCCTTCC AaaacttaaaaatgtttttaaaagggGGTTTGATTTTGACCCTCTGTGCT GCTACTTTCGCAGtTCAATATGGTACAGAGAAATGTACTCGCGACTGGGA GAAAATTGGGTGTTTCAAAGATGTTGTGACACCCTCCCGCCCGTTGCCGG ATGAATTATTAAACAGACGTGACCCCATCAATAAGAACTGGGACGGAAAA ACAATCAACTGGCATGATTATCAAACTACCCTTCACGCTCTCGCTTGTAA ATGCTCTGAACTTGCAAAAGCACGTGGACACAAAGTGTTTGGCTTACAAT TCTACGGAGAATGTTGGAGTGGAAACAATGCCTTATACCTCTTCGCCAGA GATGGAGTTGCCGAGAATAAGGATTGCGTTGGAATCGATTACCAACCTTG TGATGATAATTCAAAAACAGAATGCGTCGGAAAAGCCTTCAGAAACTACA TCTACAAAATCAAAGAagGCGGCAAAGACATCGATCAGAAAGTTCCAGGG AACTGGGGAGACTGGTCGCAGTGGTCCCCATGCTCCAAGAAATGCGCCGG TGGAACACGTGATCGATTCAGGGAATGTAATAATCCTGCTCCGAAGTTTG GAGGGAAATATTGTGAAGGAGAGGGTGAAGCAATGGAAGCATGTAACGAA GAAGCTTGTCAACCTGTCTGCAAGAAACAATTGGACATCGGAGTTATTCT TGATGGAAGCACAAGTGTGACCAAGAAGAATTGGTTGAAAACGTTAGATT TCGTCAAATCTTTCGCTAGCGAATTCTCTGTTAGCGAACAAGAAGTTCAT TTCGGTGTTATGCATTTCTCGTGGAGAGTTACGGTCGATTTCAAAATCTC TGATTCGCGATACTGGAGCCAAGAAGCTTTAGAATCAAAGGTGGACACTA TTCAATACCCGTATGGTGGAACTCGAACTGATTTAGCTTTGGACACAGCT TATTCTGAATTCTTTTGTAAAGGATGTACTGAAAGAGCATCAAAGGTACC AAAAGTTTTGCTGGTTTTGACAGATGGGAAGAGTAGTTACAATGCAAAAC CTGTTGTAAATGCTTCTGAACCCATTAAGAAAGCTGGTGTGACGATAATC GGTATCGGTGTCGGGCAAGCAGACAAGACAGAGTTGACAGAGATGGCGAC TGATGCAGACCACGTCTTCATGTTGAACCAATATGCTTATCTCAAAGATA AACTCAACTCCATGCTTAAATTGGCTTGTCAATCTGATGAATCACGACGA AGACGAAGTTTGTTGAAAAGTGGAAGATAAGTAATGGATAAAATTACCAT gttattaaaattaaaaatgctctttgaaatatatttttgtacaGTTAAAC TCTTTctcttaaaatatttatttaaaaatatctaacaactatatttaaat tctttttgcacttttataaataaaatctttgaaaatgtaATGAACGAAAT ACCGAACTCGAAAAAAGTATTTGTAATGGTTGATGGTTGTATTTCAAGAT CCTGCAGATTCATTTGTATGGTAAGTAAAGGTATGTTACAAATTAGCTta atttttgggtttcaagcccTACAAATGCTCTTGACATGATCTTATTTCCA CCATTTAGTGAATTATTTTGTCCATTTC Run BLAST on NCBI protein sequence of TCONS_00008136-protein >TCONS_00008136-protein ID=TCONS_00008136-protein|Name=TCONS_00008136-protein|organism=Clytia hemisphaerica|type=polypeptide|length=422bp
MFLKGGLILTLCAATFAVQYGTEKCTRDWEKIGCFKDVVTPSRPLPDELL NRRDPINKNWDGKTINWHDYQTTLHALACKCSELAKARGHKVFGLQFYGE CWSGNNALYLFARDGVAENKDCVGIDYQPCDDNSKTECVGKAFRNYIYKI KEGGKDIDQKVPGNWGDWSQWSPCSKKCAGGTRDRFRECNNPAPKFGGKY CEGEGEAMEACNEEACQPVCKKQLDIGVILDGSTSVTKKNWLKTLDFVKS FASEFSVSEQEVHFGVMHFSWRVTVDFKISDSRYWSQEALESKVDTIQYP YGGTRTDLALDTAYSEFFCKGCTERASKVPKVLLVLTDGKSSYNAKPVVN ASEPIKKAGVTIIGIGVGQADKTELTEMATDADHVFMLNQYAYLKDKLNS MLKLACQSDESRRRRSLLKSGR Run BLAST on NCBI transcript from alignment at sc0000082:26615..33825- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008136 ID=TCONS_00008136|Name=TCONS_00008136|organism=Clytia hemisphaerica|type=transcript|length=7211bp|location=Sequence derived from alignment at sc0000082:26615..33825- (Clytia hemisphaerica) TTTATTTTTTATTAAAAGTTCTCTTGGGTAAATTAAATTTCTAGTCGAGA
TTTCCTTCATTTTCAAATTTAATCACTAACAAGGGAGGTTGGTTCCTTCC
AAAACTTAAAAATGTTTTTAAAAGGGGGTTTGATTTTGACCCTCTGTGCT
GCTACTTTCGCAGGTAAAGGCTTTGTCTTTTTGGCTGGATAATATGAATG
TTTACTGACCAAACATTTTTTCTTCGCTTACATGCTACAGGCCCGGCGAA
AGCGGGGAGACAAGGGAGACTTCAACCTCCCCACTTTTGAGCAAATGAGA
TTTTGTCTCAAACTCCTAGCGAATTTTATCTCATTTTGAGCCTTCAGCCT
CCCCACTTTTACGGTTGAACCGCCGGGCCTGTACTTTATCGTATTTTATT
TGACTTAGATTATTTGCATTGCAAGAATGTTTTTTCTAATTCAATTTCAT
TTGATAAGATTCATAAATGGGGAACACTTACGTACCACACTTATAAATAT
AAATCACCTGACCATAAAACCGTTCCTAAATACTACTTATCTCATCTTTC
AAAGAAAGTACCAAAATATTGATTTAGACAGATTTTCTTTGACTCCGATC
TTCATAAATTTTTGATTATTTCAGTTCAATATGGTACAGAGAAATGTACT
CGCGACTGGGAGAAAATTGGGTGTTTCAAAGATGTTGTGACACCCTCCCG
CCCGTTGCCGGATGAATTATTAAACAGACGTGACCCCATCAATAAGAACT
GGGACGGAAAAACAATCAACTGGCATGATTATCAAACTACCCTTCACGCG
TGAGTTTTTGTTTTTCGTGGTAAATACTCGATTTGGTGTCATGTTTTGTT
CTTTGATTTAAAAACGCTTGAAAATCTGAATCAGCGTTTATGTTAGTGTC
ATCATAANCGTGAGTTTTTGTTTTTTGTGGTAAATACTCGATTTGGTGTC
ATGTTTTGTTCTTTGATTTAAAAACGCTTGAAAATCTGAATCAGCGTTTA
TGTTAGTGTCATCATAAGTCATCTTTCTTTCTATGACAGCCTCACGCATT
TTGTAAGTTTTATGATATGGTGCTAATGCGTTTGTTGACCCTCCCCTCTT
ATTATGGGTGGTAAAGTTTTATTGATGTCTAATTTTCTGTCAAGCTTTTG
ACAAACTTTCTCTGGATCATGTATGTATGATGGCTTAAGAAATAACATGT
CCCCAGCACAGATATCTGTAAAGCCCGAAGGGCTAGATTTGCGGCCTTGG
TCAAAAAGTGAAGCTCATCTTTGGAAGGATTTCCTACCAGAGTCACGTGA
CTAAAATATGCAATTTCACCGGTTTGAGAGATGTGAAATAGCGTTTGTCG
CCTACTTTTTTTTATCTCGCGCTCCGAAAACAATTAAAATGCTAGATCCT
ATCCATCGGCACAAAATTTAAAAAGTCAAATTTTTGCTTCACTTTTTTTT
GCTGGAGAAAGCTTAAAGTTGCCTATCTAGCCCTTCGGGCTTAGATATCT
GTGGTCCCCAGTGGATGACTTTCAAGAGGAGTGATTAAGAGAAACGCCAA
CACAATGGTTCTTAAATAATTATATAAGTTTCATTATTATTCATCATCTC
TCATCGAAATCTCTCAAATTGATCTACCAAATCTGTCAAATTAATCATAC
CCTTAGTTATACAATTTTGTTTTCTTTATTGAAACAAAGACACGTGTACA
CTACGAACATATATTACAAAACATTACTTAAACATAAAATATAGTCCCTC
CCCCCGCTAGGAACTAATCTTATTATATCGCCAGAGGTTATGTAAAAGAA
AAGAACAAAATAAATAAATAAGTTGTGAAATATAAAATATATTTGAAAAT
TGGATAAATATATTTATATTTCACAACTTAACATGGCGAAAATTCACTTA
AATAAATAAGTAAATAAAATAAAAAAGAATCTTGGAGAAGGAAGCTACAA
TTGTTATGTAAAAGCCTAAAATAAAGCACCGCTAAACCTTCCAGGTATAC
AATTTCTTAGGTGTCATAAAAACACTAAAGTATAAAATAGAAATAGAGTT
AACTAAGAAAGACAAATGGCTTTGACAACGCTTCAAGACACTCGTAACGC
ACTATCACACTAATTTATCTTTTAACTCTTTTAGTCTCGCTTGTAAATGC
TCTGAACTTGCAAAAGCACGTGGACACAAAGTGTTTGGCTTACAATTCTA
CGGAGAATGTTGGAGTGGAAACAATGCCTTATACCTCTTCGCCAGAGATG
GAGTTGCCGAGAATAAGGATTGCGTTGGAATCGATTACCAACCTTGTGAT
GATAATTCAAAAACAGAATGCGTCGGAAAAGCCTTCAGAAACTACATCTA
CAAAATCAAAGAAGGTAAGAAAAATTTTATCACATGAGGGGTTAAAAACG
TCACCTTCTCGACCGTAGCTGCCAATTGCCGCGCGAGCATTTTTTCGTCC
GCTTTATCCCACTAAAACCGTCATAGTCCTTTTTTCGCACCTATAGACAA
TAGAAAAATGTATCAAAAAAAGGATTGGATCGAGTTTAGGGGATAATCAA
ATAATTAAGTGACTACGGTCGAAAAGGTGTATTAGTGAAAATCAATAGAT
TTTGATACTTTTGACTCTCTTTTGTAGCAGGTGTGGAGTCGATGGGAGTG
TGGTCTGGAATCGAGTTATACCTTAAAAACATGTTTCATTTTACCGCAAA
ACTCAATGTAAATGTTCATGTATTGATTATAAATAGTTCAAATGACAATG
TTTTTATCTCTCTTTACAGGCGGCAAAGACATCGATCAGAAAGTTCCAGG
GAACTGGGGAGACTGGTCGCAGTGGTCCCCATGCTCCAAGAAATGCGCCG
GTGGAACACGTGATCGATTCAGGGAATGTAATAATCCTGCTCCGAAGTTT
GGAGGGAAATATTGTGAAGGAGAGGGTGAAGCAATGGAAGCATGTAACGA
AGAAGCTTGTCAACCTGGTGAGTGAAAGTGAAAGTGATCACTCTTACATT
ATCATATAATACAAAACTTCTAATCTAGCTCCCTAATGACCTGTAGATGG
TGAGTATTTGTGGACGGCTAGGGTCGGTTTTTTTTCATCCTGAGTCTTTC
TAGGGATTACAAAAACAACAAAAAGTCATAGTCTCTTTCTATGAGTCGGG
ATTTACCCCTTTTTGGACATTTTAAGGGTAGGAAGGCCATTAAAAGATAG
TGAAGATAATGTTATTCCATAATTCTAGTTAAAGTTTAAGACTCTCGCTG
ATTCAATTGTTTTGAGGGTCGTTGTATTTCTTACTGCTAAAAACTTTATT
CAATGTAAGTGTCTTATATTTGTCATAGAGGATGAAAATCTAAATTCGAA
TTCAATTTCTTCCAGTCTGCAAGAAACAATTGGACATCGGAGTTATTCTT
GATGGAAGCACAAGTGTGACCAAGAAGAATTGGTTGAAAACGTTAGATTT
CGTCAAATCTTTCGCTAGCGAATTCTCTGTTAGCGAACAAGAAGTTCATT
TCGGTGTTATGCATTTCTCGTGGAGAGTTACGGTCGATTTCAAAATCTCT
GATTCGCGATACTGGAGCCAAGAAGCTTTAGAATCAAAGGTGGACACTAT
TCAATACCCGTATGGTATGTAGAATCTAATTTTTGTATCTTTGTAAAGTT
GTAAAATCTCAAACGAGACGGGTGTATCATATTAAAAGTTTAGGCGTTCT
CGGTATAGTATTGTTTAGTGAAAAGGGTGGTTTTAGACCCTGTCGAACTT
ATCATCAGAGGAAGAGATTTGCAATTGTAATTTCATTGTTTTTTAACGAG
CGTTGCACTCCTTCGCATTTTTCCGACGTACTTGCTCTATTGTCTTAAAT
CTGCCAATATTTATTCAAGTCGCTTGGTTTCTCCAAAGGCAAATGACCGA
AGTATTTATTGGAGGAAAGATTATGTTTTTTCTGACCATGTAGTTTATTT
AATGTATAAGTTCTTCAATTTATCATTGACAGGTGGAACTCGAACTGATT
TAGCTTTGGACACAGCTTATTCTGAATTCTTTTGTAAAGGATGTACTGAA
AGAGCATCAAAGGTACCAAAAGTTTTGCTGGTTTTGACAGATGGGAAGAG
TAGTTACAATGCAAAACCTGTTGTAAATGCTTCTGAACCCATTAAGGTAA
GTGAACGGAAATACCATAACCCCCGTCCCCGCAACATAGCCTGTTAGTAC
GTGGTATACACTCCTCATTGAAAAAACTTGCCGCAAATTTCCATGTGAGA
AAAATGTCATTATATTTCTCCATTAATAAATTCACTACTCCTTAAACTTT
GAGTATTCCCAAATTTATGAGCTTTCAACAAAGGTATTCAAAATCTATAT
TACAGCAACAAATTTAGAGTATTATAGTTTAGGATTTATTATATAATGAA
TCACGTTAGTTAAAGTGGTATAAAGATTTATGAAGATGTCTGTAGCTATA
ACGTTAGCGTTGGACTTGAAACAATGTTTTTTGATCGCCTGGATTCGGAT
AGCTTCTCTAAATCCTTAGTGCTTGTAATACACGACTCCACTATCAACGC
CACAAGACATTGCACTTAGTTTACCAAGAAAAAATAAGATTAAAATTTTT
GTGAATATGAGGAAATCAATGCAACGACTCGAACTCGAACCCATTCTCCT
CACACTCAGAGCGTTTATATAGGTGTATATACTGTAGATATGATTACGAT
TGTCAATTAAAAGCTAGGTGTTGGCTAAACTCTTTTGTTCGCTTTTTACA
GAAAGCTGGTGTGACGATAATCGGTATCGGTGTCGGGCAAGCAGACAAGA
CAGAGTTGACAGAGATGGCGACTGATGCAGACCACGTCTTCATGTTGAAC
CAATATGCTTATCTCAAAGATAAACTCAACTCCATGCTTAAATTGGCTTG
TCAATCTGGTAGGTTTATCCATTATTGAAAGTATTGCTTTGTAACCTTAG
TTGTATTTTCCAGGGATTAACGTTGATTAATAGCGGTGATTTGGTGGTTT
TGAGAATCAGCCAAATTGGACAAAAAGTTTGTCAGTCGCCATTAGTCACC
GTTAAAATGTTAACATGATCTTTTGAGTTCCAAAAACACATTTAAGGTAT
TCCAAATTAAGATAGACTAACAGGCTTTACACATCAAACATGAAAATCAC
TAGTATCACTACTCACTTGTCAATGGTACATTGGTAAAACTCAGCAAAAA
CACCAGACTGATTTGATTTAGGCTCCCTTTAGGCAACATCGATTGGTATT
TTGATTGATTAGAGTTTATTTCAATTTCCGGAGATTGAATTGAAAAAACT
GTTTGTAAATCTGTTTCATGGTCAAATCTTCGATTTACAAACGTACGAAT
AATCTCAACGGAACGTTTGTAAACCTGATGAAGACCTCCACTAAAGGAGG
TCGAAATATTGTTTGAAATAAAATTTACGTGAAGAATGACCATTTGAACA
TAAATGAAGGAAATATAATTGGATTTTTTTGACCGAACACAAACCAATCC
ACTGTCCTAATGATACTTTCAATGGTATTCTCTTCAAATATTTTACAAAA
GTTACGCCAAAGAGGTTCTGTTGTGACAGACGAGAGAATATAACTTGTTT
AGACGTTTTTACTGTATTTAAACACCCCTGTCTCAGTTTACATGATCGTT
CTGGAATATACTTAAGCCCGGAGGTTTTTTTTCGAAATTGAAGCTATAAA
GTTTTAGGCTTGCTCAATCTTTCAAATCTGAATTTCAATGATGAGCATAT
TTTAACATTTTGTAGCATACAATATTAAGCTTGAATAATGATCCATTCGG
GGAAATTTAAGAATATTCTAATTAGATTCAAAATCAATTGATTTTGCTTA
CGTAAAGAAATAAAGTATATATGGTACTAAAAAATAAGAACAGGGGGCCC
TCTCGTTTCTTATAAAAGTTACCTAACTTGAAAATTTTGCAATTTCATGT
CACTGATAGGACGAGAATAGGGTACAAGAACTGGAGATCGTTTCATTCAT
TGGATTGTCATTATAAAAAAAACACACTCCCAACTCGCAGACCCGTTAGG
GTTTTTCAGCCAGTGGGGGTAAAAATAACGGACCAAGACTCGATGAGATT
TACTATTATATCAATGAGGATTTGCTTGTCTGATCATTTTTAGCGGGGAC
AACAAATAGAGCTTAATTTTCCAATGGAGAAAATATTTATGACCAAATTT
TCCAGTTGAAAGAGGTCCCAGTGGGTTTGTGAGAACGGGGTGTAAAACCT
TTGCAATTCTCATTATACTTTGTACCTAAAGTTGCATAATTAATAATTGT
AGCATATATGTTGCATTTTGGTCCTATTCAATATTGAAAAATGATGTTTA
TCCTATCTAGTAGGGGGGGGGGGGGCATGGCCCCCCCGTTTCAGGGGAAA
AACCAAAAGGATATTGGGTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGG
ACTTGCTTCCCATTTTCATGGGAAACAGCCAAAAGTATATAGGATTTTGA
TACTTTTTTGAGAGGGGCCCACGCAAAAGGCCTAACCAAACAACTGGCGT
TACAGGCATAACCCAAAAATAGGTAAAAGATTTTTGAATTTTCAAAGTTG
AATTCAACGAAAATGGTTGATGTCATCGGATAGAGCATGAAATTCTGAGC
AAAACAGTATCAGACAATAATTTTTGTATTCAAACATTTAAAAAGATGCC
TTTGAAATTTATATAAAATTCTGTCAGGAAGAGCACCATCGACGTTGAAT
TTTGTCTAGAACGTGAAAGATTTCACAGGATTTCCAATTTTTTAATGACT
ATATTTTTTTGTTATATAGATGAATCACGACGAAGACGAAGTTTGTTGAA
AAGTGGAAGATAAGTAATGGATAAAATTACCATGTTATTAAAATTAAAAA
TGCTCTTTGAAATATATTTTTGTACAGTTAAACTCTTTCTCTTAAAATAT
TTATTTAAAAATATCTAACAACTATATTTAAATTCTTTTTGCACTTTTAT
AAATAAAATCTTTGAAAATGTAATGAACGAAATACCGAACTCGAAAAAAG
TATTTGTAATGGTTGATGGTTGTATTTCAAGATCCTGCAGATTCATTTGT
ATGGTAAGTAAAGGTATGTTACAAATTAGCTTAATTTTTGGGTTTCAAGC
CCTACAAATGCTCTTGACATGATCTTATTTCCACCATTTAGTGAATTATT
TTGTCCATTTC Coding sequence (CDS) from alignment at sc0000082:26615..33825- >TCONS_00008136 ID=TCONS_00008136|Name=TCONS_00008136|organism=Clytia hemisphaerica|type=CDS|length=10152bp|location=Sequence derived from alignment at sc0000082:26615..33825- (Clytia hemisphaerica) ATGAATCACGACGAAGACGAAGTTTGTTGAAAAGTGGAAGATAAAAAGCT GGTGTGACGATAATCGGTATCGGTGTCGGGCAAGCAGACAAGACAGAGTT GACAGAGATGGCGACTGATGCAGACCACGTCTTCATGTTGAACCAATATG CTTATCTCAAAGATAAACTCAACTCCATGCTTAAATTGGCTTGTCAATCT GGTGGAACTCGAACTGATTTAGCTTTGGACACAGCTTATTCTGAATTCTT TTGTAAAGGATGTACTGAAAGAGCATCAAAGGTACCAAAAGTTTTGCTGG TTTTGACAGATGGGAAGAGTAGTTACAATGCAAAACCTGTTGTAAATGCT TCTGAACCCATTAAGTCTGCAAGAAACAATTGGACATCGGAGTTATTCTT GATGGAAGCACAAGTGTGACCAAGAAGAATTGGTTGAAAACGTTAGATTT CGTCAAATCTTTCGCTAGCGAATTCTCTGTTAGCGAACAAGAAGTTCATT TCGGTGTTATGCATTTCTCGTGGAGAGTTACGGTCGATTTCAAAATCTCT GATTCGCGATACTGGAGCCAAGAAGCTTTAGAATCAAAGGTGGACACTAT TCAATACCCGTATGGCGGCAAAGACATCGATCAGAAAGTTCCAGGGAACT GGGGAGACTGGTCGCAGTGGTCCCCATGCTCCAAGAAATGCGCCGGTGGA ACACGTGATCGATTCAGGGAATGTAATAATCCTGCTCCGAAGTTTGGAGG GAAATATTGTGAAGGAGAGGGTGAAGCAATGGAAGCATGTAACGAAGAAG CTTGTCAACCTGTCTCGCTTGTAAATGCTCTGAACTTGCAAAAGCACGTG GACACAAAGTGTTTGGCTTACAATTCTACGGAGAATGTTGGAGTGGAAAC AATGCCTTATACCTCTTCGCCAGAGATGGAGTTGCCGAGAATAAGGATTG CGTTGGAATCGATTACCAACCTTGTGATGATAATTCAAAAACAGAATGCG TCGGAAAAGCCTTCAGAAACTACATCTACAAAATCAAAGAAGTTCAATAT GGTACAGAGAAATGTACTCGCGACTGGGAGAAAATTGGGTGTTTCAAAGA TGTTGTGACACCCTCCCGCCCGTTGCCGGATGAATTATTAAACAGACGTG ACCCCATCAATAAGAACTGGGACGGAAAAACAATCAACTGGCATGATTAT CAAACTACCCTTCACGCATGTTTTTAAAAGGGGGTTTGATTTTGACCCTC TGTGCTGCTACTTTCGCAGATGAATCACGACGAAGACGAAGTTTGTTGAA AAGTGGAAGATAAAAAGCTGGTGTGACGATAATCGGTATCGGTGTCGGGC AAGCAGACAAGACAGAGTTGACAGAGATGGCGACTGATGCAGACCACGTC TTCATGTTGAACCAATATGCTTATCTCAAAGATAAACTCAACTCCATGCT TAAATTGGCTTGTCAATCTGGTGGAACTCGAACTGATTTAGCTTTGGACA CAGCTTATTCTGAATTCTTTTGTAAAGGATGTACTGAAAGAGCATCAAAG GTACCAAAAGTTTTGCTGGTTTTGACAGATGGGAAGAGTAGTTACAATGC AAAACCTGTTGTAAATGCTTCTGAACCCATTAAGTCTGCAAGAAACAATT GGACATCGGAGTTATTCTTGATGGAAGCACAAGTGTGACCAAGAAGAATT GGTTGAAAACGTTAGATTTCGTCAAATCTTTCGCTAGCGAATTCTCTGTT AGCGAACAAGAAGTTCATTTCGGTGTTATGCATTTCTCGTGGAGAGTTAC GGTCGATTTCAAAATCTCTGATTCGCGATACTGGAGCCAAGAAGCTTTAG AATCAAAGGTGGACACTATTCAATACCCGTATGGCGGCAAAGACATCGAT CAGAAAGTTCCAGGGAACTGGGGAGACTGGTCGCAGTGGTCCCCATGCTC CAAGAAATGCGCCGGTGGAACACGTGATCGATTCAGGGAATGTAATAATC CTGCTCCGAAGTTTGGAGGGAAATATTGTGAAGGAGAGGGTGAAGCAATG GAAGCATGTAACGAAGAAGCTTGTCAACCTGTCTCGCTTGTAAATGCTCT GAACTTGCAAAAGCACGTGGACACAAAGTGTTTGGCTTACAATTCTACGG AGAATGTTGGAGTGGAAACAATGCCTTATACCTCTTCGCCAGAGATGGAG TTGCCGAGAATAAGGATTGCGTTGGAATCGATTACCAACCTTGTGATGAT AATTCAAAAACAGAATGCGTCGGAAAAGCCTTCAGAAACTACATCTACAA AATCAAAGAAGTTCAATATGGTACAGAGAAATGTACTCGCGACTGGGAGA AAATTGGGTGTTTCAAAGATGTTGTGACACCCTCCCGCCCGTTGCCGGAT GAATTATTAAACAGACGTGACCCCATCAATAAGAACTGGGACGGAAAAAC AATCAACTGGCATGATTATCAAACTACCCTTCACGCATGTTTTTAAAAGG GGGTTTGATTTTGACCCTCTGTGCTGCTACTTTCGCAGATGAATCACGAC GAAGACGAAGTTTGTTGAAAAGTGGAAGATAAAAAGCTGGTGTGACGATA ATCGGTATCGGTGTCGGGCAAGCAGACAAGACAGAGTTGACAGAGATGGC GACTGATGCAGACCACGTCTTCATGTTGAACCAATATGCTTATCTCAAAG ATAAACTCAACTCCATGCTTAAATTGGCTTGTCAATCTGGTGGAACTCGA ACTGATTTAGCTTTGGACACAGCTTATTCTGAATTCTTTTGTAAAGGATG TACTGAAAGAGCATCAAAGGTACCAAAAGTTTTGCTGGTTTTGACAGATG GGAAGAGTAGTTACAATGCAAAACCTGTTGTAAATGCTTCTGAACCCATT AAGTCTGCAAGAAACAATTGGACATCGGAGTTATTCTTGATGGAAGCACA AGTGTGACCAAGAAGAATTGGTTGAAAACGTTAGATTTCGTCAAATCTTT CGCTAGCGAATTCTCTGTTAGCGAACAAGAAGTTCATTTCGGTGTTATGC ATTTCTCGTGGAGAGTTACGGTCGATTTCAAAATCTCTGATTCGCGATAC TGGAGCCAAGAAGCTTTAGAATCAAAGGTGGACACTATTCAATACCCGTA TGGCGGCAAAGACATCGATCAGAAAGTTCCAGGGAACTGGGGAGACTGGT CGCAGTGGTCCCCATGCTCCAAGAAATGCGCCGGTGGAACACGTGATCGA TTCAGGGAATGTAATAATCCTGCTCCGAAGTTTGGAGGGAAATATTGTGA AGGAGAGGGTGAAGCAATGGAAGCATGTAACGAAGAAGCTTGTCAACCTG TCTCGCTTGTAAATGCTCTGAACTTGCAAAAGCACGTGGACACAAAGTGT TTGGCTTACAATTCTACGGAGAATGTTGGAGTGGAAACAATGCCTTATAC CTCTTCGCCAGAGATGGAGTTGCCGAGAATAAGGATTGCGTTGGAATCGA TTACCAACCTTGTGATGATAATTCAAAAACAGAATGCGTCGGAAAAGCCT TCAGAAACTACATCTACAAAATCAAAGAAGTTCAATATGGTACAGAGAAA TGTACTCGCGACTGGGAGAAAATTGGGTGTTTCAAAGATGTTGTGACACC CTCCCGCCCGTTGCCGGATGAATTATTAAACAGACGTGACCCCATCAATA AGAACTGGGACGGAAAAACAATCAACTGGCATGATTATCAAACTACCCTT CACGCATGTTTTTAAAAGGGGGTTTGATTTTGACCCTCTGTGCTGCTACT TTCGCAGATGAATCACGACGAAGACGAAGTTTGTTGAAAAGTGGAAGATA AAAAGCTGGTGTGACGATAATCGGTATCGGTGTCGGGCAAGCAGACAAGA CAGAGTTGACAGAGATGGCGACTGATGCAGACCACGTCTTCATGTTGAAC CAATATGCTTATCTCAAAGATAAACTCAACTCCATGCTTAAATTGGCTTG TCAATCTGGTGGAACTCGAACTGATTTAGCTTTGGACACAGCTTATTCTG AATTCTTTTGTAAAGGATGTACTGAAAGAGCATCAAAGGTACCAAAAGTT TTGCTGGTTTTGACAGATGGGAAGAGTAGTTACAATGCAAAACCTGTTGT AAATGCTTCTGAACCCATTAAGTCTGCAAGAAACAATTGGACATCGGAGT TATTCTTGATGGAAGCACAAGTGTGACCAAGAAGAATTGGTTGAAAACGT TAGATTTCGTCAAATCTTTCGCTAGCGAATTCTCTGTTAGCGAACAAGAA GTTCATTTCGGTGTTATGCATTTCTCGTGGAGAGTTACGGTCGATTTCAA AATCTCTGATTCGCGATACTGGAGCCAAGAAGCTTTAGAATCAAAGGTGG ACACTATTCAATACCCGTATGGCGGCAAAGACATCGATCAGAAAGTTCCA GGGAACTGGGGAGACTGGTCGCAGTGGTCCCCATGCTCCAAGAAATGCGC CGGTGGAACACGTGATCGATTCAGGGAATGTAATAATCCTGCTCCGAAGT TTGGAGGGAAATATTGTGAAGGAGAGGGTGAAGCAATGGAAGCATGTAAC GAAGAAGCTTGTCAACCTGTCTCGCTTGTAAATGCTCTGAACTTGCAAAA GCACGTGGACACAAAGTGTTTGGCTTACAATTCTACGGAGAATGTTGGAG TGGAAACAATGCCTTATACCTCTTCGCCAGAGATGGAGTTGCCGAGAATA AGGATTGCGTTGGAATCGATTACCAACCTTGTGATGATAATTCAAAAACA GAATGCGTCGGAAAAGCCTTCAGAAACTACATCTACAAAATCAAAGAAGT TCAATATGGTACAGAGAAATGTACTCGCGACTGGGAGAAAATTGGGTGTT TCAAAGATGTTGTGACACCCTCCCGCCCGTTGCCGGATGAATTATTAAAC AGACGTGACCCCATCAATAAGAACTGGGACGGAAAAACAATCAACTGGCA TGATTATCAAACTACCCTTCACGCATGTTTTTAAAAGGGGGTTTGATTTT GACCCTCTGTGCTGCTACTTTCGCAGATGAATCACGACGAAGACGAAGTT TGTTGAAAAGTGGAAGATAAAAAGCTGGTGTGACGATAATCGGTATCGGT GTCGGGCAAGCAGACAAGACAGAGTTGACAGAGATGGCGACTGATGCAGA CCACGTCTTCATGTTGAACCAATATGCTTATCTCAAAGATAAACTCAACT CCATGCTTAAATTGGCTTGTCAATCTGGTGGAACTCGAACTGATTTAGCT TTGGACACAGCTTATTCTGAATTCTTTTGTAAAGGATGTACTGAAAGAGC ATCAAAGGTACCAAAAGTTTTGCTGGTTTTGACAGATGGGAAGAGTAGTT ACAATGCAAAACCTGTTGTAAATGCTTCTGAACCCATTAAGTCTGCAAGA AACAATTGGACATCGGAGTTATTCTTGATGGAAGCACAAGTGTGACCAAG AAGAATTGGTTGAAAACGTTAGATTTCGTCAAATCTTTCGCTAGCGAATT CTCTGTTAGCGAACAAGAAGTTCATTTCGGTGTTATGCATTTCTCGTGGA GAGTTACGGTCGATTTCAAAATCTCTGATTCGCGATACTGGAGCCAAGAA GCTTTAGAATCAAAGGTGGACACTATTCAATACCCGTATGGCGGCAAAGA CATCGATCAGAAAGTTCCAGGGAACTGGGGAGACTGGTCGCAGTGGTCCC CATGCTCCAAGAAATGCGCCGGTGGAACACGTGATCGATTCAGGGAATGT AATAATCCTGCTCCGAAGTTTGGAGGGAAATATTGTGAAGGAGAGGGTGA AGCAATGGAAGCATGTAACGAAGAAGCTTGTCAACCTGTCTCGCTTGTAA ATGCTCTGAACTTGCAAAAGCACGTGGACACAAAGTGTTTGGCTTACAAT TCTACGGAGAATGTTGGAGTGGAAACAATGCCTTATACCTCTTCGCCAGA GATGGAGTTGCCGAGAATAAGGATTGCGTTGGAATCGATTACCAACCTTG TGATGATAATTCAAAAACAGAATGCGTCGGAAAAGCCTTCAGAAACTACA TCTACAAAATCAAAGAAGTTCAATATGGTACAGAGAAATGTACTCGCGAC TGGGAGAAAATTGGGTGTTTCAAAGATGTTGTGACACCCTCCCGCCCGTT GCCGGATGAATTATTAAACAGACGTGACCCCATCAATAAGAACTGGGACG GAAAAACAATCAACTGGCATGATTATCAAACTACCCTTCACGCATGTTTT TAAAAGGGGGTTTGATTTTGACCCTCTGTGCTGCTACTTTCGCAGATGAA TCACGACGAAGACGAAGTTTGTTGAAAAGTGGAAGATAAAAAGCTGGTGT GACGATAATCGGTATCGGTGTCGGGCAAGCAGACAAGACAGAGTTGACAG AGATGGCGACTGATGCAGACCACGTCTTCATGTTGAACCAATATGCTTAT CTCAAAGATAAACTCAACTCCATGCTTAAATTGGCTTGTCAATCTGGTGG AACTCGAACTGATTTAGCTTTGGACACAGCTTATTCTGAATTCTTTTGTA AAGGATGTACTGAAAGAGCATCAAAGGTACCAAAAGTTTTGCTGGTTTTG ACAGATGGGAAGAGTAGTTACAATGCAAAACCTGTTGTAAATGCTTCTGA ACCCATTAAGTCTGCAAGAAACAATTGGACATCGGAGTTATTCTTGATGG AAGCACAAGTGTGACCAAGAAGAATTGGTTGAAAACGTTAGATTTCGTCA AATCTTTCGCTAGCGAATTCTCTGTTAGCGAACAAGAAGTTCATTTCGGT GTTATGCATTTCTCGTGGAGAGTTACGGTCGATTTCAAAATCTCTGATTC GCGATACTGGAGCCAAGAAGCTTTAGAATCAAAGGTGGACACTATTCAAT ACCCGTATGGCGGCAAAGACATCGATCAGAAAGTTCCAGGGAACTGGGGA GACTGGTCGCAGTGGTCCCCATGCTCCAAGAAATGCGCCGGTGGAACACG TGATCGATTCAGGGAATGTAATAATCCTGCTCCGAAGTTTGGAGGGAAAT ATTGTGAAGGAGAGGGTGAAGCAATGGAAGCATGTAACGAAGAAGCTTGT CAACCTGTCTCGCTTGTAAATGCTCTGAACTTGCAAAAGCACGTGGACAC AAAGTGTTTGGCTTACAATTCTACGGAGAATGTTGGAGTGGAAACAATGC CTTATACCTCTTCGCCAGAGATGGAGTTGCCGAGAATAAGGATTGCGTTG GAATCGATTACCAACCTTGTGATGATAATTCAAAAACAGAATGCGTCGGA AAAGCCTTCAGAAACTACATCTACAAAATCAAAGAAGTTCAATATGGTAC AGAGAAATGTACTCGCGACTGGGAGAAAATTGGGTGTTTCAAAGATGTTG TGACACCCTCCCGCCCGTTGCCGGATGAATTATTAAACAGACGTGACCCC ATCAATAAGAACTGGGACGGAAAAACAATCAACTGGCATGATTATCAAAC TACCCTTCACGCATGTTTTTAAAAGGGGGTTTGATTTTGACCCTCTGTGC TGCTACTTTCGCAGATGAATCACGACGAAGACGAAGTTTGTTGAAAAGTG GAAGATAAAAAGCTGGTGTGACGATAATCGGTATCGGTGTCGGGCAAGCA GACAAGACAGAGTTGACAGAGATGGCGACTGATGCAGACCACGTCTTCAT GTTGAACCAATATGCTTATCTCAAAGATAAACTCAACTCCATGCTTAAAT TGGCTTGTCAATCTGGTGGAACTCGAACTGATTTAGCTTTGGACACAGCT TATTCTGAATTCTTTTGTAAAGGATGTACTGAAAGAGCATCAAAGGTACC AAAAGTTTTGCTGGTTTTGACAGATGGGAAGAGTAGTTACAATGCAAAAC CTGTTGTAAATGCTTCTGAACCCATTAAGTCTGCAAGAAACAATTGGACA TCGGAGTTATTCTTGATGGAAGCACAAGTGTGACCAAGAAGAATTGGTTG AAAACGTTAGATTTCGTCAAATCTTTCGCTAGCGAATTCTCTGTTAGCGA ACAAGAAGTTCATTTCGGTGTTATGCATTTCTCGTGGAGAGTTACGGTCG ATTTCAAAATCTCTGATTCGCGATACTGGAGCCAAGAAGCTTTAGAATCA AAGGTGGACACTATTCAATACCCGTATGGCGGCAAAGACATCGATCAGAA AGTTCCAGGGAACTGGGGAGACTGGTCGCAGTGGTCCCCATGCTCCAAGA AATGCGCCGGTGGAACACGTGATCGATTCAGGGAATGTAATAATCCTGCT CCGAAGTTTGGAGGGAAATATTGTGAAGGAGAGGGTGAAGCAATGGAAGC ATGTAACGAAGAAGCTTGTCAACCTGTCTCGCTTGTAAATGCTCTGAACT TGCAAAAGCACGTGGACACAAAGTGTTTGGCTTACAATTCTACGGAGAAT GTTGGAGTGGAAACAATGCCTTATACCTCTTCGCCAGAGATGGAGTTGCC GAGAATAAGGATTGCGTTGGAATCGATTACCAACCTTGTGATGATAATTC AAAAACAGAATGCGTCGGAAAAGCCTTCAGAAACTACATCTACAAAATCA AAGAAGTTCAATATGGTACAGAGAAATGTACTCGCGACTGGGAGAAAATT GGGTGTTTCAAAGATGTTGTGACACCCTCCCGCCCGTTGCCGGATGAATT ATTAAACAGACGTGACCCCATCAATAAGAACTGGGACGGAAAAACAATCA ACTGGCATGATTATCAAACTACCCTTCACGCATGTTTTTAAAAGGGGGTT TGATTTTGACCCTCTGTGCTGCTACTTTCGCAGATGAATCACGACGAAGA CGAAGTTTGTTGAAAAGTGGAAGATAAAAAGCTGGTGTGACGATAATCGG TATCGGTGTCGGGCAAGCAGACAAGACAGAGTTGACAGAGATGGCGACTG ATGCAGACCACGTCTTCATGTTGAACCAATATGCTTATCTCAAAGATAAA CTCAACTCCATGCTTAAATTGGCTTGTCAATCTGGTGGAACTCGAACTGA TTTAGCTTTGGACACAGCTTATTCTGAATTCTTTTGTAAAGGATGTACTG AAAGAGCATCAAAGGTACCAAAAGTTTTGCTGGTTTTGACAGATGGGAAG AGTAGTTACAATGCAAAACCTGTTGTAAATGCTTCTGAACCCATTAAGTC TGCAAGAAACAATTGGACATCGGAGTTATTCTTGATGGAAGCACAAGTGT GACCAAGAAGAATTGGTTGAAAACGTTAGATTTCGTCAAATCTTTCGCTA GCGAATTCTCTGTTAGCGAACAAGAAGTTCATTTCGGTGTTATGCATTTC TCGTGGAGAGTTACGGTCGATTTCAAAATCTCTGATTCGCGATACTGGAG CCAAGAAGCTTTAGAATCAAAGGTGGACACTATTCAATACCCGTATGGCG GCAAAGACATCGATCAGAAAGTTCCAGGGAACTGGGGAGACTGGTCGCAG TGGTCCCCATGCTCCAAGAAATGCGCCGGTGGAACACGTGATCGATTCAG GGAATGTAATAATCCTGCTCCGAAGTTTGGAGGGAAATATTGTGAAGGAG AGGGTGAAGCAATGGAAGCATGTAACGAAGAAGCTTGTCAACCTGTCTCG CTTGTAAATGCTCTGAACTTGCAAAAGCACGTGGACACAAAGTGTTTGGC TTACAATTCTACGGAGAATGTTGGAGTGGAAACAATGCCTTATACCTCTT CGCCAGAGATGGAGTTGCCGAGAATAAGGATTGCGTTGGAATCGATTACC AACCTTGTGATGATAATTCAAAAACAGAATGCGTCGGAAAAGCCTTCAGA AACTACATCTACAAAATCAAAGAAGTTCAATATGGTACAGAGAAATGTAC TCGCGACTGGGAGAAAATTGGGTGTTTCAAAGATGTTGTGACACCCTCCC GCCCGTTGCCGGATGAATTATTAAACAGACGTGACCCCATCAATAAGAAC TGGGACGGAAAAACAATCAACTGGCATGATTATCAAACTACCCTTCACGC ATGTTTTTAAAAGGGGGTTTGATTTTGACCCTCTGTGCTGCTACTTTCGC AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00008136-exon-sc0000082-1575043694:33663..33825 | TCONS_00008136-exon-sc0000082-1575043694:33663..33825 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1575043694:33027..33201 | TCONS_00008136-exon-sc0000082-1575043694:33027..33201 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1575043694:31462..31691 | TCONS_00008136-exon-sc0000082-1575043694:31462..31691 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1575043694:30859..31056 | TCONS_00008136-exon-sc0000082-1575043694:30859..31056 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1575043694:30212..30460 | TCONS_00008136-exon-sc0000082-1575043694:30212..30460 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1575043694:29680..29843 | TCONS_00008136-exon-sc0000082-1575043694:29680..29843 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1575043694:28918..29074 | TCONS_00008136-exon-sc0000082-1575043694:28918..29074 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1575043694:26615..27006 | TCONS_00008136-exon-sc0000082-1575043694:26615..27006 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1510915933:33663..33825 | TCONS_00008136-exon-sc0000082-1510915933:33663..33825 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1510915933:33027..33201 | TCONS_00008136-exon-sc0000082-1510915933:33027..33201 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1510915933:31462..31691 | TCONS_00008136-exon-sc0000082-1510915933:31462..31691 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1510915933:30859..31056 | TCONS_00008136-exon-sc0000082-1510915933:30859..31056 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1510915933:30212..30460 | TCONS_00008136-exon-sc0000082-1510915933:30212..30460 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1510915933:29680..29843 | TCONS_00008136-exon-sc0000082-1510915933:29680..29843 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1510915933:28918..29074 | TCONS_00008136-exon-sc0000082-1510915933:28918..29074 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1510915933:26615..27006 | TCONS_00008136-exon-sc0000082-1510915933:26615..27006 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1491911889:33663..33825 | TCONS_00008136-exon-sc0000082-1491911889:33663..33825 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1491911889:33027..33201 | TCONS_00008136-exon-sc0000082-1491911889:33027..33201 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1491911889:31462..31691 | TCONS_00008136-exon-sc0000082-1491911889:31462..31691 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1491911889:30859..31056 | TCONS_00008136-exon-sc0000082-1491911889:30859..31056 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1491911889:30212..30460 | TCONS_00008136-exon-sc0000082-1491911889:30212..30460 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1491911889:29680..29843 | TCONS_00008136-exon-sc0000082-1491911889:29680..29843 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1491911889:28918..29074 | TCONS_00008136-exon-sc0000082-1491911889:28918..29074 | Clytia hemisphaerica | exon |
TCONS_00008136-exon-sc0000082-1491911889:26615..27006 | TCONS_00008136-exon-sc0000082-1491911889:26615..27006 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000082 | supercontig | sc0000082:26615..33825 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00008136 vs. Swiss-Prot (Human)
Match: CO6A5 (Collagen alpha-5(VI) chain OS=Homo sapiens GN=COL6A5 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.668e-17 Identity = 59/188 (31.38%), Postives = 96/188 (51.06%), Query Frame = 1
Query: 766 VCKKQLDIGVILDGSTSVTKKNWLKTLDFVKSFASEFSVSEQEVHFGVMHFSWRVTVDFKISDSRYWSQEALESKVDTIQYPYGGTRTDLALDTAYSEFFCKGCTERASKVPKVLLVLTDGKSSYNAKPVVNASEPIKKAGVTIIGIGVGQADKTELTEMATDADHVFMLNQYAYLKDKLNSMLKLAC 1329
V K+ DI ++DGS+S+ +K + + F+ FS+ +V GV+ +S V+F I+D Y + L + I+ GGT T ALD + G +R SKVP L+VLTDG S+ VV ++ ++ +T+ +G+G A+K EL E+A + V + LK N +++ C
Sbjct: 436 VDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVRVGVVQYSDDTEVEFYITD--YSNDIDLRKAIFNIKQLTGGTYTGKALDYIL-QIIKNGMKDRMSKVPCYLIVLTDGMST---DRVVEPAKRLRAEQITVHAVGIGAANKIELQEIAGKEERVSFGQNFDALKSIKNEVVREIC 617
The following BLAST results are available for this feature:
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