TCONS_00008133 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008133
Unique NameTCONS_00008133
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2369

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008133 ID=TCONS_00008133|Name=TCONS_00008133|organism=Clytia hemisphaerica|type=transcript|length=2369bp
gaaaattaaaaacaaagaaattcgagtaaaaaatgaaatgttcaaagaaa
ataaaaagagatCGCAATGTGAATGTGCTGCTGGTTATGTCACCATTGAA
CAAGAAATCGGTTGAAGATCAAATTAAGAGCAATTTTCTACAACAAGATA
AATTGACCATGATATGTCATAGGACTTCTAGaCCTCACAAACACGAAAAG
AATGGAGAACAAAACAATGTTATTTTACATCGCTGGTTTATTGCTTTTTG
CGACGATCGGAATCCAAGCACAACGAAGCCCTTCCAAAACATTTTTGGAG
GTTGTTGGACTTTCAGAACGTGTGGTTGGTGGAAAGCCTGTGTCCCAAGG
CATGTTTCCATGGATTGTTTTCATCCAGGCTAATCACAAATACAAGAATA
ATACACAGACTAGTAATTTGTGTGGAGGATCGCTTATCCATGAAAGGTGG
GTGTTGACTGCAGCACATTGTTTACCTCACGGCGAACGTACTACACGAGT
GGTAGTTCATATCGGGAAGAAATCGCCTGTCTCCTTCAGTCAAAGTCGAA
CCAACCTCCCCGCGGAGAAATACCGAGTACGATCTATCTTCATCCATCCA
AATTATGCTGGTAGCGGTTTCAGTGGTGCTGACCTTGCACTCTTACATTT
GCCTCGTCCATCGAAACATCCCACCATTCGATTGGCTATTTCACCGGTAG
ACGATAAATGGTACGAAAGTGGATCCATAGCAACGGTTGCTGGTTGGGGT
TCCACCTCACCTCACGACACACAACAAATCTCACAAGAACTTCGTTCTGC
TGAAGTTAAGGTTGTAAGTCACAAGAAGTGCAACAAAGCAAATTCGTTCA
ACGGGTCCGTTCTGAAAGACATGTTTTGCGCGTCCGGTGACGGGAAAGAT
GCGTGTTATTCGGACAGTGGTGGTCCTTTAATGGTACGGGATGGATGTCG
GGATGAATGGGTCTTGATCGGCGTCGTGTCGTGGGGAAAGAGTTGCGCTC
ACAAAGATTACCCTGGTGTTTACGTCAAATTATCGGTGTACTCTGATTGG
CTGATGGACCGTTTGTATCCAGGACGACAGAAATCGTATTTATCAACACA
ATGTTGTTGTCGGCACCAAAATAATGAGATCGATGAGAATGCATTGCgaa
caaaattcaaaaagaagcGACACAATGAACATCCTGCAAACATGAAGCTC
GTCCATCTTCAGTCACGTGGTTTCTCCGGTCATTACCGCTTACTAAAGGG
ACCGCAAGGACCACCCGGCGAACCCGGAAGACGAGGAAGCGCCGGCCTTC
CCGGTCGTCAAGGACCTCCGGGTGATCGAGGCAAACAAGGACCAAGAGGA
AGAGTGgGAGCAGCAGGAAAGCCAGGTTTGCCAGGAAACCCAGGAAAGTT
GATCGGTGCAAACGACAAGATTTATTCCAGCTTGGAAGAAGTCAATCGAG
TACTTGACGAGGTCAAGAAGTTGAAAACTGAGCTAGAAATGACTATTCGC
GAAACTAGGCTAGGCCGAACAATTGAGCATGCAGCGCGAACTTGTCAAGA
CATATTTCGATCGAACACCGGTCTCGTCAATTCTGGCAAATATTGGTTGA
GTCCGCAACAATATGATGACTCAGCGTTTGTTGGATACTGCAACATGGAT
GACGTAGGTGGGGGTTGGACACTAGTTTATTCCTTCAAAGTATTACGTCA
TCAAAATAAGTCATTGGAGATGGTACCAAAACCAAAATGGCGGAAACACG
AGCACAAAGAAGAAGGAGCATCAGATACAGCGCCTAAATACCCCAAGGAC
CATGGAGCAGTGGATTACAACTTGTGGCGATACATCGGTGCTGAGATTCT
CATCAAATCCGTACGCGGTGATTGGTTGAAATGTAAATCAAGTGAAGCGT
CTTCAAGATATCTCGATATTTTCCCGCCTACTTCTTCTTTGAAAAAGAGA
CCAATTattcataaactagactgtgagaTTGTAAAAAATGAACATGAGTC
AGTAAGTGGCTGTCTCAGGCTACCAGAGGCCATTATGTGGAACCGTAGTG
GACTGGTAATGACCGAGTCTAGTCTTTTAGACTGGGCAATTCAAAAACAC
TGTAGTGGTGATCAAAGAATAGACGATGAAGTTTTGTTTTATATACGGTA
AAGATGAAATAGTGATATATTCGGTAATGTAATTTGGGATGGGTGACAGA
GGGCTGTGTCCCTCCATACGTTTGAAGAAATTGCACTAACAAGAGAGCAG
TAAACGTGTTTAGTTCATTTATCAGACCGCCGACTACTCGATATTCAAAT
TCATACAGCCATGCAAAGACTGAGGGTATTAAATGAAAGTCCGTTTGATT
CGCTCGTTCTTCTCGTttg
Run BLAST on NCBI

transcript from alignment at sc0000082:626895..636679+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008133 ID=TCONS_00008133|Name=TCONS_00008133|organism=Clytia hemisphaerica|type=transcript|length=9785bp|location=Sequence derived from alignment at sc0000082:626895..636679+ (Clytia hemisphaerica)
gaaaattaaaaacaaagaaattcgagtaaaaaatgaaatgttcaaagaaa
ataaaaagagatCGCAATGTGAATGTGCTGCTGGTTATGTCACCATTGAA
CAAGAAATCGGTTGAAGATCAAATTAAGAGCAATTTTCTACAACAAGATA
AATTGACCATGATATGTCATAGGACTTCTAGGTTTgtacattttaatttt
aattttgtttacCTTTTTCAATGCCAAATGATGTCTATATGATGTTGAAA
ATGCTGCCAACCAATCAGACATTCGGTCTGGGATAAGTTGATGCATAACT
CCTAACGCGGAACAAGAGATCTTAAAATATCTTTTACTCATTAAAACACA
TTACTTTAGAGATAATATGTCTTTTATGTCAAGATCTAAACACACAGCAA
GGGGCCCTCATAAATTTGATAATTGCGTCATCAGCTGCTCACAGAAGGCT
TTCGAGTTGATCAGTTTAGAATTTAAGTCatattcgaaattcaatttcat
tttatataccCTATGATTCAATTAATTAAagtttattcatttttgttgTC
TGAATGCCCACTTTAACAGGCGTTGCCAGGGGAGCAACTTAATTCTAAAA
TACGACTGGTTTTGCCAAAGATTTGTTTGGGTGTTTGTGCAATACACAAG
TTTAATGTCCGTTGTTTCCTtaaaaatatagtttttttttgtaaagtgAG
CCCGTTAAGAATTAGTTACCTTTAGTCACTTCACGCATCCCCCAAAAGGT
TCAAGGATGGGAGAGAAGAAGAGTTAGTTTCCTCGCTAGACGACAAAAAG
ATTAGAGATCATTCGTGAAAAACAAATGAACAGCTTTTTGTGATATTGGA
TTCACAATGCAATGGCATCAAATGAAATTCCCAAAGTTCCTGTCAGGAAA
TTAAgccctatttttaaaagaatgccATTTTCAAAAGTATCTTATACGCG
CGAAATTTTCGAAGCTAattatgatgtcatcaaaagaatttgtgTGACTG
ATTGGTACGTCGTTTGTTTgttatgtttgttttgatctggtGTACACAAT
ACACGAAATGTTACAACATATTGTCAATAGAATGTACAATAAAGTTATCA
TTCAAtcataagaaatattttctacATGATATTTCAATCATCCTGTAATC
AGAACGAGATTATACAAAGCATGAGAAAGTGACGTCGGTGATAGCNAATA
TTTTCTACATGATATTTCACTCAGCCTGTAATCAGAACGAGATTATACAA
AGCATGAGAAAGTGACGTCGGTGATAGCAccaatgaatgaataaaaatga
gttGGACTGAGAAAATCTCTTTACAGcattatatttttgtaacagagaAA
AAATAAACGACTTATATCTTTTTGTTGCGGAGATATTCATTTTCCCAGGC
CTCTTTTCTGATGATGATTTGATGTCACGATTCTCTGATCCTTATCACCC
GTCATCAACCCACCCCCTTGTGACGTCACACTCGCCACAACTCGATCTTT
CAACTCGCTCAGCGAGTGACGAATCCATCCTAACAAGACTAGCCAATGAC
ATTTTTGCAGGGGCAGCTGGTTGTAAACTTTCCTTAAACCCGCATGAATG
TCATTTGAAAGAGAACGGATAAACAAAAATAGAGAGTGAGTGTGTGCTGT
AAGATGGAGAGTGACGAGATAATAACTAATTTAATAGTGGCGGAAAAATC
AAGATGTCCTCCTCTAATAATAAACTGCTAAACAAAGTCGATCACTTCTA
ATCATTATCTATTCGAGTCAACTTATCTTCTTGTTGGGCTTCTTTTCGAA
AACTTGCGCGCGGGGGTTGTAAAAAGAAGACTTGTTTTTTAATTCGGTCG
GTGCTGTTTTTTCTGTACTTCAAGCTGGGAGCCTTTTTCGGTCTTCCCTT
GACTACgaagtgtagatagagtgttaAAAGGTTTGTTCTAaaggtttgtt
tacatttgaagCATCGCGTAACTCAAATGTTTAGCGCGAATTGAAAGAGT
GAGGCGCGTTTCGTTAGAGTTATGTGAATCAGTTTAAATTTAATGTAGTG
TTAAATATTGACACAAANTGAAAGAGTGATGCGCGTTTCGTTAGAGTTAT
GTGAATCAGTTTAAATTTAATGTAGTGTTAAATATTGACACAAAGAAAAA
GCCTTCTCCTTTATTTGACGGTGAAATATTATGTGGATCGTCATCAGCGC
AAGTTGTATTCGCTTTAAAATGTGTTTGTGTTTGAGTTGAAACAAACTCT
ACTCTCCAACGAGTACATGTGTTTGTACAATTTCATGTTTATTGAGAAAT
TATTGACCAAAATATGGATTACAACCAAACAAATTTTATCATACCATGAT
TACATAGGAGTATGAGTTTGAGGTCggtgatttctctttcgatggTTACT
TGTACCGTCTTGATCAACCTTTtcccttttcattttcagaCCTCACAAAC
ACGAAAAGAATGGAGAACAAAACAATGTTATTTTACATCGCTGGTTTATT
GCTTTTTGCGACGATCGGAATCCAAGCACAACGAAGCCCTTCCAAAACAT
TTTTGGAGGTTGTTGGACTTTCAGAACGTGTGGTTGGTGGAAAGCCTGTG
TCCCAAGGCATGTTTCCATGGATTGTTTTCATCCAGGCTAATCACAAATA
CAAGAATAATACACAGACTAGTAATTTGTGTGGAGGATCGCTTATCCATG
AAAGGTACTTCATTTTTCTATCTATTCGCGCGCTTTGCGTTCTGCTGGGA
TTGTTAGTATTTACAGTAATTTTCTTGCAAATGTGNATTCGCGCGCGTGT
TTGCGGTTCGTTCGCGCGCTTCGCGTTCTGCTGGGACTGTTAGTATTTAC
AGTAATTTTCTTGAATATATACTttataaaatatgttttttcCTTCTCAA
TGACTTGTTGTAATCATTTGGTGTAATTACGACATGGTTTCTACGTCACC
CTGGAAACCTGTTCGAATGATTTGCATTCCTTTTGCATTTTGTATGTGCA
ATATTTGTTCTTCGATTTCATTGTTTTCCAAACTTCGATGTCATCATTTT
TGTGGTACGTTGCTAAGATGGGCGAGGGATCCTGCAAGTTTTGCATTTTC
GTTTTCAAACGGTGAAAGTAAATTAACGACTTTTGTCGGTAATTTTGTCG
TGTGTCGGTCGGAAAGAGGAAAAAGAGTAGGATGCGATTACAAAAAATGG
CCGATTTTTTAACACATCATTTACAACATTGACGGATATTAGAAGCCATA
GACTTTCTTTCTTATGAAGCTTTTATGATATCCGCTCACAGGTTTTTAGC
GGAAAGCATTTCGCGGTCTTTATTATATGATAACGGTATTTcataaaact
ttcaatttttttagcaGATTATTTGTTCAAGTAGAATCACTAGATTTCTa
actttctgactttctgattaaaaaaaactttgatggTAGTGTTACTTGTA
TACTAGGTAAACATCTTACAATTTTGAGGTGCCGAGAGGTGATTAACATA
CGTAACTCATACAAAACTTGAATATTTCCAGAAAGCTTCTTCGCTCTTTA
TCTTCTATGAGACACGTGTAGATGCAGTTAATCGCCATCACCGATCATTA
AAACATTCCATTCTTTTTAACACCCTGTTCACATTAAGGAAATGAAGAAG
TTCCGTCGAGGAAATCACCACCCTCAAAATTAACCaagaatttcaaaagt
ttattttaGTGGTCTCTTTCATTCGCGTTTTCAAGTTTGTTCGCCTGCTA
AAACTGTTCTTCTTAAATTCTTAAATTGTAGAACGGATTAATAAAAATCG
TTACgtatttgtaacttttttcttttcttgaccGATTTAACTTGTGGTTT
TAAGGACTGCCTCTGTAAATGTCCTTCGATCGGAGAGCAATATCATCTTT
TCGATTGAGCTTTCCATACCCACCTTCTATACCCACCTTCTAACAGCTCG
CACTTACGTCATAAACACGTTAAGCTGACAGAACATACTGAGGATCATCC
TCATACATCTGGGAATAGCGCATGACAGAAATAGAAAGCTATTCGATAGC
AGTGTTgaagagagaaagagagagatGTTTGCAAATTGAATTGCTGCCAC
TGATGCAGCCCATTACAAGGTGTCATTATCATCGGCTAATCGTGTGTAAT
TGTTATAAGACACACAAATTATGAACATCAATTCGATTAAAACAACTTTC
TCTATTTCATCATGATCTTTATCTTCGGTTTTGTTTCCACAACCCGCTCA
ACTCAAAATATTACATTTTCAAAAGGTGGTTATTGAATTTCTTAAAACTT
CCCCTTAACTTTGTTTGTGGAGATCAACCTTTGTATATTGTGTGAACTTC
CTTCTTCATTAGAGAAGAAAGGAGAAGAAAGGAGATCTTGTAACACACAC
CTCATCTCATTATTTTGATCATCCTCCAATATTCATGTGTTTGTTTACAC
AAACGAGCTTACTTTGCATGTTGCAAGCTCATCAACATCAACTCCATTGT
GATTCAACTGATGACATGATATATCCAACCTAATTATCATAATTTATTTA
TCATATTCACCCTACCTTCATCCAATATCAATAAGATCAATAATTTTCCC
GATATCATCAATGAAATTTAACAATATCTGAGTGCAAAAGCTATCTCTGC
TTCATCTTCTACCTTTTACTGATTGACCACGCTACTCTGGTTGAAACACG
GGGACCTTTTTCACAATATATGAGGACTCAGgttctttctttattttgtt
agaGCTATAAACGATGGTTTCAAAACAGGTGGTATTTTATGGTGCTAATT
ATCGTTTTATTACAGCGGAAATAACGCGACATTaatttctaacatttttt
aatttgatcgAAATTGACCAAATACCGAAATGATTTCCGCGCCATTTGCG
GGACCGGAATATTTCAAAAGGGGGATGAGTTCAAGAGACGTCAATTCGTT
GAATTTGTTTTCATCGTTAAACTTGCTCAGTGTTCTGAAATTGTTGAATG
TTACCACACATAtcgttgttgttattattaACAAAAACTCGCGAATAAAT
GAACTTTTTGTTCTCAGAAAACCACCctttcatatctttttaattaACAT
ACTTCAAATGGTCATCTAATCACTCGGTCAGTACTCGATTAATCTCATCA
AAGTCCACCAAACTATTCTCAAATCGATAGTTATCAAAGGCGCCTTTCTT
ATCTCACAAATCGAAAATAGCACACATTTATCTCCTGAATGTTTGTTTGT
TATCTCAAACACAAACAATCTGCGACTTNCTTATCTCCAGAATGTTTGTT
TGTTATCTCAAACACAAACAATCTGCGACTTAATGATCAATTTTCATGGA
TTCCTAAGGAACTAATCATCAATGATCGGAATGAAGGCAACACGATCGAC
AAAAGGCAACCTGTGACGACCGTCTAAAAAAGCTGTGAAGACCTTCCAAA
ATGTGTCAATTTCTGTCAGATTTCGAAAAACGGGAATAAAAAGGGACCAA
AGAAGCTAATACATTTAATCAAATTTATCAAACGGATACTTTTAAATGAA
CAATTTGATGTTGGGAAGGTTGTAAGATTAGGGAGCTTATAAATTGATGA
GATCAAATTGAAACTGTATAATAAGCTTTGGATTTTCGTGTCTTTTGATC
TTGTTTACATGAAGTCATGCTGCGAAAGATGCGGGAACACTCAACAATTT
GAAACTATTtctctttttcatcaaatttctcTAATTATTTTAATGAGATT
GATTTTTCTGACCAACATTCAATATCGATCTTTCAGAAGAGTTAATCAGA
GTATTGTCTTTAAAGATCTAATTTTTTCTTCGCACAAACTTAACGTGAAC
TATTTGATTCGGCATCCTTTGAACTTCAAACTTCCCTGGTCGAAGAATCG
ATAGCCAAATGAACCACCTGGAAAGATCTGTTACAAAAACAGCTTGCTAT
TTATCTAAACTACTAAAGAGCTAGTCATCCTCTAAACAGTTCCTGTATAC
TGCTGAAAAGGATTGAAAAGAAAACCaacattaaaaaaactttttaacat
aatttgtTCTCCATCCAACATTTGTTTTGTAAAATTCTTCATCTCACTCA
CTTTCATCTTCAGGTGGGTGTTGACTGCAGCACATTGTTTACCTCACGGC
GAACGTACTACACGAGTGGTAGTTCATATCGGGAAGAAATCGCCTGTCTC
CTTCAGTCAAAGTCGAACCAACCTCCCCGCGGAGAAATACCGAGTACGAT
CTATCTTCATCCATCCAAATTATGCTGGTAGCGGTTTCAGTGGTAAGTGT
AGTATTCGCTGAAAGTTCTCATTTTCAACAGCTTTAAAAGGTCGAATTTG
CAAATACCTATCTAATAAAAGCATAGTTTCAaagcttgttttgattttat
catCAGGTGCTGACCTTGCACTCTTACATTTGCCTCGTCCATCGAAACAT
CCCACCATTCGATTGGCTATTTCACCGGTAGACGATAAATGGTACGAAAG
TGGATCCATAGCAACGGTTGCTGGTTGGGGTTCCACCTCACCTCACGACA
CACAACAAATCTCACAAGAACTTCGTTCTGCTGAAGTTAAGGTTAGTGAC
ATATTTCATTACTTAGATGGAAAACTCCCCTCATTCATTAACCAATGTGA
CCAACCATACAATAAGTTAGTTATTAAGTGGAAATTTCTAGCTTTACTAT
CGCAAAGATTTGTATTTCTCTTGAGAGATTCTAATGACGAAACACTTTCT
TTCAATCTTGCAGGTTGTAAGTCACAAGAAGTGCAACAAAGCAAATTCGT
TCAACGGGTCCGTTCTGAAAGACATGTTTTGCGCGTCCGGTGACGGGAAA
GATGCGTGTTATTCGGACAGTGGTGGTCCTTTAATGGTACGGGATGGATG
TCGGGATGAATGGGTCTTGATCGGCGTCGTGTCGTGGGGAAAGAGTTGCG
CTCACAAAGATTACCCTGGTTAGTGATCATATTTTCCTTCGATGAGTTTT
TAAATAATGAACTCTTGAACTCGCtgctcatttttggacctacctgagcT
TCTATAAACTAGCCCGTGTTCGTCACCAGCTGTTTCGTTATTGGCTAATT
CCACCCCTTATAACTAATAGCTGGCCGTACTTCATTTCGTGTACTTAAAT
CTGTCATATTTCTGACTTCCAGGTGTTTACGTCAAATTATCGGTGTACTC
TGATTGGCTGATGGACCGTTTGTATCCAGGACGACAGAAATCGTATTTAT
CAACACAATGTTGTTGTCGGCACCAAAATAATGAGGTGAGTCAAAACATT
CTACGAATTGTCTGCTATGTTTCGCTGTTTGAAGCTTGTTCAATTGTAAG
AAAGAAAATGCACTGTTCTTTTgatctttcttcattttcattatcTTACA
GATCGATGAGAATGCATTGCgaacaaaattcaaaaagaagcGACACAATG
AACATCCTGCAAACATGAAGCTCGTCCATCTTCAGTCACGTGGTTTCTCC
GGTCATTACCGCTTACTAAAGGGACCGCAAGGACCACCCGGCGAACCCGG
AAGACGAGGAAGCGCCGGCCTTCCCGGTCGTCAAGGACCTCCGGTAAGCT
TGATCGAGTTAAACATTTTTCAGATTTGGCATTTCTTTACTTcgctttaa
atttaaaaaaatatatgaaattcGTTATGTTTATtttaataagcatgttt
tcacaTTTTCAGGGTGATCGAGGCAAACAAGGACCAAGAGGAAGAGTGGT
AAGCAAGACAATcatgagatttaaaaaaatccttaattttcggattcttt
ttttctcttacaGTTGACCTTTTCGGTACCGTTTCGTAAATTATATTGTT
CACATTAGAAGGTCGTCTCATTCACTTTGGTcacgaaatgcaatttttta
ctGAAAATCCTCAAAAACTCTAGTATATAGGAATATAAAAGAGTGTTGAC
CTTGGCAAGAAGTGGGtgtcaaccgcgaaaattagttctgcAAAATGAGC
CAATTTAGTACCCTTGCaacgcgaaaataagttccgtgaaaattagttcc
gtgaaaattgggatgagctggagtttttataagatacttcactaattggt
cgtTTGAAgaaatagagatgacgcgttctttaaataaagtaacaaaattg
ttttactacgtgttaacgaccaaccaaatcaaataagagcttgtaaaaac
tccagcttgtccctgaaaattagtttccttaaggtattcaagatgatgat
ttttcatattttaggGAGCAGCAGGAAAGCCAGGTTTGCCAGGAAACCCA
GGAAAGTTGATCGGTGCAAACGACAAGATTTATTCCAGCTTGGAAGAAGT
CAATCGAGTACTTGACGAGGTCAAGAAGTTGAAAACTGAGCTAGAAATGA
CTATTCGCGAAACTAGGCTAGGTAAAGTGATCTTATTATTTCTGCGTAGA
GGATCCAATATTTCCGAACCATTTCCATTCATCTTTTGCAAGCATTCAAG
TTTCAATTACCTTCCTTGACTGAatttgttttgaactttttcCCCAGGCC
GAACAATTGAGCATGCAGCGCGAACTTGTCAAGACATATTTCGATCGAAC
ACCGGTCTCGTCAATTCTGGCAAATATTGGTTGAGTCCGCAACAATATGA
TGACTCAGCGTTTGTTGGATACTGCAACATGGATGACGTAGGTGGGGGTT
GGACACTAGTTTATTCCTTCAAAGTATTACGTCATCAAAATAAGTCATTG
GAGATGGTACCAAAACCAAAATGGCGGAAACACGAGCACAAAGAAGAAGG
AGCATCAGATACAGCGCCTAAATGTAAGTTTCAACTTGTCTGTTTTGAAT
GCTTTGTGTTTTCATTTGTCTTTTTGAGTGCTTTTCACATTGCTGTTGAA
TCAAACAAGTCAGTATTACAGGCTCATGATCTCTAACCATAGCCTAGTTA
ACTCTAACCATACATTGAAGATTGAAGTTTTAATGTGCTGATTAAGCTAT
TTCACTGTCTAAGAAATAAGCTCTAAAGATGTATGAGCGGGTTTTGCTGT
CAGACTCATTTTACACTCGATAGAGTTGTCGTTTTTCGAAACACTACCAC
GGCAAATCTTCATTGTTAAAAATATGCACAAAAGGAAGATACATCCAGGT
CTGTAATGAATTTTAGTTCTTCAAACTCACACTTGACTTCTTCTCTCCTT
TTTAGACCCCAAGGACCATGGAGCAGTGGATTACAACTTGTGGCGATACA
TCGGTGCTGAGATTCTCATCAAATCCGTACGCGGTGATTGGTTGAAATGT
AAATCAAGTGAAGCGTCTTCAAGATATCTCGATATTTTCCCGCCTACTTC
TTCTTTGAAAAAGAGACCAATTattcataaactagactgtgagaTTGTAA
AAAATGAACATGAGTCAGTAAGTGGCTGTCTCAGGCTACCAGAGGCCATT
ATGTGGAACCGTAGTGGACTGGTAATGACCGAGTCTAGTCTTTTAGACTG
GGCAATTCAAAAACACTGTAGTGGTGATCAAAGAATAGACGATGAAGTTT
TGTTTTATATACGGTAAAGATGAAATAGTGATATATTCGGTAATGTAATT
TGGGATGGGTGACAGAGGGCTGTGTCCCTCCATACGTTTGAAGAAATTGC
ACTAACAAGAGAGCAGTAAACGTGTTTAGTTCATTTATCAGACCGCCGAC
TACTCGATATTCAAATTCATACAGCCATGCAAAGACTGAGGGTATTAAAT
GAAAGTCCGTTTGATTCGCTCGTTCTTCTCGTttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004584XLOC_004584Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008133-exon-sc0000082-1491911889:626895..627075TCONS_00008133-exon-sc0000082-1491911889:626895..627075Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:626895..627075TCONS_00008133-exon-sc0000082-1510915933:626895..627075Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:626895..627075TCONS_00008133-exon-sc0000082-1575043694:626895..627075Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:629334..629598TCONS_00008133-exon-sc0000082-1491911889:629334..629598Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:629334..629598TCONS_00008133-exon-sc0000082-1510915933:629334..629598Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:629334..629598TCONS_00008133-exon-sc0000082-1575043694:629334..629598Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:633008..633186TCONS_00008133-exon-sc0000082-1491911889:633008..633186Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:633008..633186TCONS_00008133-exon-sc0000082-1510915933:633008..633186Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:633008..633186TCONS_00008133-exon-sc0000082-1575043694:633008..633186Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:633301..633485TCONS_00008133-exon-sc0000082-1491911889:633301..633485Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:633301..633485TCONS_00008133-exon-sc0000082-1510915933:633301..633485Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:633301..633485TCONS_00008133-exon-sc0000082-1575043694:633301..633485Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:633658..633862TCONS_00008133-exon-sc0000082-1491911889:633658..633862Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:633658..633862TCONS_00008133-exon-sc0000082-1510915933:633658..633862Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:633658..633862TCONS_00008133-exon-sc0000082-1575043694:633658..633862Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:634067..634179TCONS_00008133-exon-sc0000082-1491911889:634067..634179Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:634067..634179TCONS_00008133-exon-sc0000082-1510915933:634067..634179Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:634067..634179TCONS_00008133-exon-sc0000082-1575043694:634067..634179Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:634296..634487TCONS_00008133-exon-sc0000082-1491911889:634296..634487Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:634296..634487TCONS_00008133-exon-sc0000082-1510915933:634296..634487Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:634296..634487TCONS_00008133-exon-sc0000082-1575043694:634296..634487Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:634607..634642TCONS_00008133-exon-sc0000082-1491911889:634607..634642Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:634607..634642TCONS_00008133-exon-sc0000082-1510915933:634607..634642Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:634607..634642TCONS_00008133-exon-sc0000082-1575043694:634607..634642Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:635159..635315TCONS_00008133-exon-sc0000082-1491911889:635159..635315Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:635159..635315TCONS_00008133-exon-sc0000082-1510915933:635159..635315Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:635159..635315TCONS_00008133-exon-sc0000082-1575043694:635159..635315Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:635442..635717TCONS_00008133-exon-sc0000082-1491911889:635442..635717Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:635442..635717TCONS_00008133-exon-sc0000082-1510915933:635442..635717Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:635442..635717TCONS_00008133-exon-sc0000082-1575043694:635442..635717Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1491911889:636100..636679TCONS_00008133-exon-sc0000082-1491911889:636100..636679Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1510915933:636100..636679TCONS_00008133-exon-sc0000082-1510915933:636100..636679Clytia hemisphaericaexon
TCONS_00008133-exon-sc0000082-1575043694:636100..636679TCONS_00008133-exon-sc0000082-1575043694:636100..636679Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:626895..636679 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.853802	1.55363	0.539316	0	4.49642	2.76647	1.68931	2.499e-07	5.7163	4.7661	6.19031	3.88473	1.38941	2.53747	2.38737	3.63322	5.05653	3.82248	0	2.20066	2.0265	1.69696	2.36957	4.6151	1.12533e-06	1.25908	2.38115	3.96406	2.91169	3.9005
Blast
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BLAST of TCONS_00008133 vs. Swiss-Prot (Human)
Match: TM11D (Transmembrane protease serine 11D OS=Homo sapiens GN=TMPRSS11D PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.037e-38
Identity = 89/256 (34.77%), Postives = 130/256 (50.78%), Query Frame = 1 
Query:  298 EVVGLSE-RVVGGKPVSQGMFPWIVFIQANHKYKNNTQTSNLCGGSLIHERWVLTAAHCLPHGERTTRVVVHIGKKSPVSFSQSRTNLPAEKYRVRSIFIHPNYAGSGFSGADLALLHLPRPSKHPT-IRLAISPVDDKWYESGSIATVAGWGSTSPHDTQQISQELRSAEVKVVSHKKCNKANSFNGSVLKDMFCAS--GDGKDACYSDSGGPLMVRDGCRDEWVLIGVVSWGKSCAHKDYPGVYVKLSVYSDWL 1053
            +++ LSE R++GG    +G +PW V ++ N+ +         CGGSLI+  W+LTAAHC                +  ++ S   T  P  + RVR+I IH NY  +     D+AL+ L         I     P   +    GS A V GWG+           ELR  +V+++S+  CN  +S+NG++L  M CA     G DAC  DSGGPL V++  R  W ++G+VSWG  C   D PGVY +++ Y DW+
Sbjct:  178 DLITLSEQRILGGTEAEEGSWPWQVSLRLNNAHH--------CGGSLINNMWILTAAHCFRSNS---------NPRDWIATSGISTTFPKLRMRVRNILIHNNYKSATHEN-DIALVRLENSVTFTKDIHSVCLPAATQNIPPGSTAYVTGWGAQ--EYAGHTVPELRQGQVRIISNDVCNAPHSYNGAILSGMLCAGVPQGGVDACQGDSGGPL-VQEDSRRLWFIVGIVSWGDQCGLPDKPGVYTRVTAYLDWI 412
The following BLAST results are available for this feature:
BLAST of TCONS_00008133 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM11D1.037e-3834.77Transmembrane protease serine 11D OS=Homo sapiens ... [more]
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