TCONS_00008122 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00008122
Unique Name	TCONS_00008122
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	846

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000082:452813..458556+
coding sequence from alignment at sc0000082:452813..458556+

transcript sequence

>TCONS_00008122 ID=TCONS_00008122|Name=TCONS_00008122|organism=Clytia hemisphaerica|type=transcript|length=846bp
tttatttttagtatgttgtcaacaaaaataaatcaattatCAAAAACAGT
ATTATTACgtaaacttttgattggaaacGTATCAGCACAATCTAAGAACC
TACATGGTATAGTTGCTGGCTGCTACCAAGCCCCAGGTGAAGATGGTGAA
ATTGTATTAACAGGGACGACTGAATCTCTTAACACTGAAACTGGTGGCAA
ACTTTTACAAGCGCTTAACACTTCAAACTTTGATGGGAAACCTGGCAGCG
TCCGAACATTCACGAATTTATCAGATAAATACCCTTTGCTGACTGTCTGT
GGTTTGGGTGAAGAGAATTTGGATATTGATGAGAACGAGTGTTTGGACGA
GCGCAAGGAAAATGTACGGATTGGGGCTGGAgCGGGCGCCAAAGAGTTGA
AGAAATACAAAGTGGACGTGATGTCATTGGATGATTGTGGAGATGCTCAA
TCTGCTGCCGAAGGAGTTGGATTGAGTACTCATTCTTTCCAAGAATTCAA
AtcgaaaaaggaaaatgaaaccTCTTGCACATTCAATGTCCTGTCCTCTG
CccaaacttcAGAGTTCGAACAAGGTTTGGCGATGGCAGAGGGTCAGAAT
TGGGCTCGTGATTTGATGGAAACGCCTTCTAATTTCAAATATCCTGAACT
GTTTGCTGACAAAGTTGTTCAACGATTCTCGGCGTTCAAGAATGTTGATG
TCATCGTCAGAGATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTC
CTGTCAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCA
TTACAACCAAAATGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGA

Run BLAST on NCBI

protein sequence of TCONS_00008122-protein

>TCONS_00008122-protein ID=TCONS_00008122-protein|Name=TCONS_00008122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
FIFSMLSTKINQLSKTVLLRKLLIGNVSAQSKNLHGIVAGCYQAPGEDGE
IVLTGTTESLNTETGGKLLQALNTSNFDGKPGSVRTFTNLSDKYPLLTVC
GLGEENLDIDENECLDERKENVRIGAGAGAKELKKYKVDVMSLDDCGDAQ
SAAEGVGLSTHSFQEFKSKKENETSCTFNVLSSAQTSEFEQGLAMAEGQN
WARDLMETPSNFKYPELFADKVVQRFSAFKNVDVIVRDDVWAREKGMDCF
LSVGKGSDKKPMFVELHYNQNADEQKKVVLVG

Run BLAST on NCBI

transcript from alignment at sc0000082:452813..458556+

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00008122 ID=TCONS_00008122|Name=TCONS_00008122|organism=Clytia hemisphaerica|type=transcript|length=5744bp|location=Sequence derived from alignment at sc0000082:452813..458556+ (Clytia hemisphaerica)
tttatttttagtatgttgtcaacaaaaataaatcaattatCAAAAACAGT
ATTATTACgtaaacttttgattggaaacGTATCAGCACAATCTAAGGTAT
GatttaaaataattatttttggaaaatcatttTGTAAACATAGCGTCGGC
CTGGgtctaggtcccaggcaaaaattaagttccctctgagttttaagtcc
ctCCAAAGATTCTTGAAATATTTGTGGTAGCCCCCAGGGCATCCGacact
tttaaaagtttttttctgctAAAAAAGGGTTATTCAATGTGTTGCAGTTC
GAAGGTTATGACAAAATGTTTTGCtcattttctataaaaaacttttgctc
attttctataaaaaactttcaacttcatgagctttaatttgagtaattga
agaaTTGAAGCCAACCATTAAGATAAAGTATTCAGCTGTCACGTTGAATG
ATGAGGTTTCAGCTCCCCAAAGTACATTAGGTCccccaaatatttgaaac
atcttTAGCCCCCACCTTTTTGGGGCTTTTTGGAGGatgtaacccccccc
ccaactAGCAGGGCTGACGCTATGAAAACTTTAGAATAATTACATCTCTT
ATATATGAATACATTATGATACATAATAAACTTTATAATATATTACAGAA
ATGATTTGATACAACTGTTTATTACCCAATACAATGAAGCtacattttta
tcttttcttacTTTAGAACCTACATGGTATAGTTGCTGGCTGCTACCAAG
CCCCAGGTGAAGATGGTGAAATTGTATTAACAGGGACGACTGAATCTCTT
AACACTGAAACTGGTGGCAAACTTTTACAAGCGCTTAACACGTaatatga
atttattttcttgaCTAACAAAAAACTTACatccaaaaagtcaaaattac
AGAATCAATGATGACATGCATTCGAGCACATTACATTACCGTTGATGTTT
TCCTTGCATTTCAGTTCAAACTTTGATGGGAAACCTGGCAGCGTCCGAAC
ATTCACGAATTTATCAGATGTATGAAACTTAttcttgtgaaatatttttc
agtcAAATCGTCGTTTTAGAAATTTATGCTCATTCTCTGTCATTCGCCAT
TATACTAACTGTAGAAATTTGTTTTCTGGTTTAATCGaatctgttttctt
tttttcaccaGAAATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAG
AATTTGGATATTGATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAATGT
ACGGATTGGGGCTGGAggtatttcaattttcttttctttgtacatttttg
taaTGCTTTGTATATCCCTGTGATCATTCCCTTTTGCTCTATAACTGGAT
GATTCAGGTATTTTTGTTTCAGGTAAGTGTTTGATTGGAGGGGAAGGTTT
TTAAAGtctattttcattaaaatcttcGAATAACCTTTCTTTCAGCGGGC
GCCAAAGAGTTGAAGAAATACAAAGTGGACGTGATGTCATTGGATGATTG
TGGAGATGCTCAATGTAATGTCTTCTTTCTTTTGATCAGTGATGGAAACT
GTTTTATTTGAGTTCTTCTCATTGCACTACATTACTGTCACTAATTTAGA
GTTGAAGAATTCGAAACATTTTCAGCTCTTCCTTCTTTCCTTGTGTATTA
ACAAGATGTGATTAATTTGTTCTTTCGTGATAGCTGCTGCCGAAGGAGTT
GGATTGAGTACTCATTCTTTCCAAGAATTCAAAtcgaaaaaggaaaatga
aaccTCTTGCACATTCAATGTCCTGTCCTCTGCGTGAGTATTTTACTTTT
AATCCAAACTTAGGTATAAAGAAAAGGTTTGATCTTATAAACTTCTCACT
TACTTTATGATGTCTTTATCTGAGAAATCATAGAGATAAAATCCAATGTC
CATTGAatttatttcagccaaacttcAGAGTTCGAACAAGGTTTGGCGAT
GGCAGAGGGTCAGAATTGGGCTCGTGATTTGATGGAAACGCCTTCTAATT
TCAAATATCCTGAACTGTTTGCTGACAAAGTTGTCCAACGATTCTCGGCG
TTCAAGAATGTTGATGTCATCGTCAGGTGAATAAATTATTGTGAATGATT
TTGATCTTTGAAAATGAACGCATTTTTCCGACTCCAGGTAGGTTTGTCGT
AACAAGAACTTTtacatataaaatacaaaaacctAATGAAACAAatagaa
gaagaaacaaaatcattaattttGAGTTGACCAATAATAGTAcatgtttt
ataagaatatgctaagaactGTCACCATcgtatatttttacaaccgaACC
GTTAATAAGAATCTCGAGACTTCACAAAATtgtcatacttttttttttgg
gtgGGGGGTATGTATATAGATATAGGCAGGGTTTAGATTCTAAACTTAGA
ATGTCGTTAAGAATATTATGGGTTGATTTTTATCCTAAAGttgagaatat
ccatgatgaaatggaaaaaaataccATTCTTATAACAAAAGCGTTTAGGG
TTTAAGAATGTCCCTGAGCCATTGGCTCCTTGCAAAGTATCACCCTGTAT
TAGCTGTTTGGACCATCTTGCAAGCAGCgggctttcattttctttcatta
ttttcCAGAGATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCT
GTCAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCATT
ACAACCAAAATGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGAAAAGGT
AATTCATTTATCTACATCAACAAACATCCGGTTGTATGAAGTAGTTAGAC
CCCGCTGGCTTGAATGATTGATGCANAATTGGGCTCGTGATTTGATGGAA
ACGCCTTCTAATTTCAAATATCCTGAACTGTTTGCTGACAAAGTTGTTCA
ACGATTCTCGGCGTTCAAGAATGTTGATGTCATCGTCAGGTGAATAAATT
ATTGTGAATGATTTTGATCTTTGAAAATGAACGCATTTTTCCGACTCCAG
GTAGGTTTGTCGTAACAAGAACTTTtacatataaaatacaaaaacctAAT
GAAACAAatagaagaagaaacaaaatcattaattttGAGTTGACCAATAA
TAGTAcatgttttataagaatatgctaagaactGTCACCATcgtatattt
ttacaaccgaACCGTTAATAAGAATCTCGAGACTTCACAAAATtgtcata
cttttttttttgggtgGGGGGTATGTATATAGATATAGGCAGGGTTTAGA
TTCTAAACTTAGAATGTCGTTAAGAATATTATGGGTTGATTTTTATCCTA
AAGttgagaatatccatgatgaaatggaaaaaaataccATTCTTATAACA
AAAGCGTTTAGGGTTTAAGAATGTCCCTGAGCCATTGGCTCCTTGCAAAG
TATCACCCTGTATTAGCTGTTTGGACCATCTTGCAAGCAGcggtttttca
ttttctttcattattttcCAGAGATGATGTCTGGGCGCGAGAGAAAGGAA
TGGATTGTTTCCTGTCAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTT
GTGGAACTTCATTACAACCAAAATGCAGATGAACAAAAGAAAGTGGTTCT
TGTTGGAAAAGGTAATTCATTTATCTACATCAACAAACATCCGGTTGTAT
GAAGTAGTTAGACCCCGCTGGCTTGAATGATTGATGCACGCGAAGACGTT
GAATTGCAAGAGTTTGATTTGTGACGAatcaaatagcttaaaacggATCA
CGTGTCTTAAATTTCATTCATCTCTCCAGTTGGCCGGGAAAAACAAAGAT
AAAGCTTTGAGGCaactttttgaacaattttttatttttattttaggaaT
CACATTCGATACgtaagtgacgtcattttttcgtTTTGTGTGATTGTTGA
GTGTTAAAAGACGAAGCAGAGAAGATATTCATCTACATATTCATCGACAA
CTCAGGAAACTTTCCGTACTACTCATCATGTTAATAAGAAGATGTgcact
gaaaataattttcaaaatcagcTGGCTATCGGATTAAAAGTGTATCTTGA
TCGGTTTACGGGTGACGTAATAAAATCCAGGGGGTCTCGAGTCAAAAAGG
AGATTTTGCTGATCGAGTTggtaagattttatttattataattttgaCTT
CTTCATTTCATCTCTCTAGTGGCGGTATTTCGATCAAACCTAGTAGTGGG
ATGGGTTTGATGCGGGGAGACATGGGTGGAGCCGCTTGCGTTTTGGCTAC
GCTGCACATCATTGCAAAATTGAAGCTACCTGTCAATTTATCAGTGCTGG
TTCCCATGGCAGAAAATATGCCGTCTGATCGAGCAGCCAAACCAGGAGAT
GTTTTTACTGCACTCAATGGAAAGACCGTCGAGGTTGGTTCTATTTTACT
ATCCGAGGACGCTGGTTAGAAAGATATTCGTGTTATGAGCTTTTGTACCA
TATCTTGTACATATCCATTCTTTCAAAGATGTCAAATAAATGGGCCcctt
gtgttttttgtttgctgtttttttttactctcGCAGCAGAACCCCTTATA
ACATTGATAAATTTCTGAAAACACTTTTATCTGTCAAAAAAATCcattat
tttgctccaaaatcTGATAATGACTGTTCGGATAATAATCCCCCTCGCCT
TGTAATCAGCATCTCCCCATTCAGCAAATTTCAAACTCCCTTTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTGGCGAT
GGCAGAGGGTCAGAATTGGGCTCGTGATTTGATGGAAACGCCTTCTAATT
TCAAATATCCTGAACTGTTTGCTGACAAAGTTGTTCAACGATTCTCGGCG
TTCAAGAATGTTGATGTCATCGTCAGGTGAATAAATTATTGTGAATGATT
TTGATCTTTGAAAATGAACGCATTTTTCCGACTCCAGGTAGGTTTGTCGT
AACAAGAACTTTtacatataaaatacaaaaacctAATGAAACAAatagaa
gaagaaacaaaatcattaattttGAGTTGACCAATAATAGTAcatgtttt
ataagaatatgctaagaactGTCACCATcgtatatttttacaaccgaACC
GTTAATAAGAATCTCGAGACTTCACAAAATtgtcatacttttttttttgg
gtgGGGGGTATGTATATAGATATAGGCAGGGTTTAGATTCTAAACTTAGA
ATGTCGTTAAGAATATTATGGGTTGATTTTTATCCTAAAGttgagaatat
ccatgatgaaatggaaaaaaataccATTCTTATAACAAAAGCGTTTAGGG
TTTAAGAATGTCCCTGAGCCATTGGCTCCTTGCAAAGTATCACCCTGTAT
TAGCTGTTTGGACCATCTTGCAAGCAGCgggctttcattttctttcatta
ttttcCAGAGATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCT
GTCAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCATT
ACAACCAAAATGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGA

Coding sequence (CDS) from alignment at sc0000082:452813..458556+

>TCONS_00008122 ID=TCONS_00008122|Name=TCONS_00008122|organism=Clytia hemisphaerica|type=CDS|length=7614bp|location=Sequence derived from alignment at sc0000082:452813..458556+ (Clytia hemisphaerica)
tttatttttagtatgttgtcaacaaaaataaatcaattatCAAAAACAGT
ATTATTACgtaaacttttgattggaaacGTATCAGCACAATCTAAGAACC
TACATGGTATAGTTGCTGGCTGCTACCAAGCCCCAGGTGAAGATGGTGAA
ATTGTATTAACAGGGACGACTGAATCTCTTAACACTGAAACTGGTGGCAA
ACTTTTACAAGCGCTTAACACTTCAAACTTTGATGGGAAACCTGGCAGCG
TCCGAACATTCACGAATTTATCAGATAAATACCCTTTGCTGACTGTCTGT
GGTTTGGGTGAAGAGAATTTGGATATTGATGAGAACGAGTGTTTGGACGA
GCGCAAGGAAAATGTACGGATTGGGGCTGGAgCGGGCGCCAAAGAGTTGA
AGAAATACAAAGTGGACGTGATGTCATTGGATGATTGTGGAGATGCTCAA
TCTGCTGCCGAAGGAGTTGGATTGAGTACTCATTCTTTCCAAGAATTCAA
AtcgaaaaaggaaaatgaaaccTCTTGCACATTCAATGTCCTGTCCTCTG
CccaaacttcAGAGTTCGAACAAGGTTTGGCGATGGCAGAGGGTCAGAAT
TGGGCTCGTGATTTGATGGAAACGCCTTCTAATTTCAAATATCCTGAACT
GTTTGCTGACAAAGTTGTTCAACGATTCTCGGCGTTCAAGAATGTTGATG
TCATCGTCAGAGATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTC
CTGTCAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCA
TTACAACCAAAATGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGAttta
tttttagtatgttgtcaacaaaaataaatcaattatCAAAAACAGTATTA
TTACgtaaacttttgattggaaacGTATCAGCACAATCTAAGAACCTACA
TGGTATAGTTGCTGGCTGCTACCAAGCCCCAGGTGAAGATGGTGAAATTG
TATTAACAGGGACGACTGAATCTCTTAACACTGAAACTGGTGGCAAACTT
TTACAAGCGCTTAACACTTCAAACTTTGATGGGAAACCTGGCAGCGTCCG
AACATTCACGAATTTATCAGATAAATACCCTTTGCTGACTGTCTGTGGTT
TGGGTGAAGAGAATTTGGATATTGATGAGAACGAGTGTTTGGACGAGCGC
AAGGAAAATGTACGGATTGGGGCTGGAgCGGGCGCCAAAGAGTTGAAGAA
ATACAAAGTGGACGTGATGTCATTGGATGATTGTGGAGATGCTCAATCTG
CTGCCGAAGGAGTTGGATTGAGTACTCATTCTTTCCAAGAATTCAAAtcg
aaaaaggaaaatgaaaccTCTTGCACATTCAATGTCCTGTCCTCTGCcca
aacttcAGAGTTCGAACAAGGTTTGGCGATGGCAGAGGGTCAGAATTGGG
CTCGTGATTTGATGGAAACGCCTTCTAATTTCAAATATCCTGAACTGTTT
GCTGACAAAGTTGTTCAACGATTCTCGGCGTTCAAGAATGTTGATGTCAT
CGTCAGAGATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCTGT
CAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCATTAC
AACCAAAATGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGAtttatttt
tagtatgttgtcaacaaaaataaatcaattatCAAAAACAGTATTATTAC
gtaaacttttgattggaaacGTATCAGCACAATCTAAGAACCTACATGGT
ATAGTTGCTGGCTGCTACCAAGCCCCAGGTGAAGATGGTGAAATTGTATT
AACAGGGACGACTGAATCTCTTAACACTGAAACTGGTGGCAAACTTTTAC
AAGCGCTTAACACTTCAAACTTTGATGGGAAACCTGGCAGCGTCCGAACA
TTCACGAATTTATCAGATAAATACCCTTTGCTGACTGTCTGTGGTTTGGG
TGAAGAGAATTTGGATATTGATGAGAACGAGTGTTTGGACGAGCGCAAGG
AAAATGTACGGATTGGGGCTGGAgCGGGCGCCAAAGAGTTGAAGAAATAC
AAAGTGGACGTGATGTCATTGGATGATTGTGGAGATGCTCAATCTGCTGC
CGAAGGAGTTGGATTGAGTACTCATTCTTTCCAAGAATTCAAAtcgaaaa
aggaaaatgaaaccTCTTGCACATTCAATGTCCTGTCCTCTGCccaaact
tcAGAGTTCGAACAAGGTTTGGCGATGGCAGAGGGTCAGAATTGGGCTCG
TGATTTGATGGAAACGCCTTCTAATTTCAAATATCCTGAACTGTTTGCTG
ACAAAGTTGTTCAACGATTCTCGGCGTTCAAGAATGTTGATGTCATCGTC
AGAGATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCTGTCAGT
TGGTAAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCATTACAACC
AAAATGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGAtttatttttagt
atgttgtcaacaaaaataaatcaattatCAAAAACAGTATTATTACgtaa
acttttgattggaaacGTATCAGCACAATCTAAGAACCTACATGGTATAG
TTGCTGGCTGCTACCAAGCCCCAGGTGAAGATGGTGAAATTGTATTAACA
GGGACGACTGAATCTCTTAACACTGAAACTGGTGGCAAACTTTTACAAGC
GCTTAACACTTCAAACTTTGATGGGAAACCTGGCAGCGTCCGAACATTCA
CGAATTTATCAGATAAATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAA
GAGAATTTGGATATTGATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAA
TGTACGGATTGGGGCTGGAgCGGGCGCCAAAGAGTTGAAGAAATACAAAG
TGGACGTGATGTCATTGGATGATTGTGGAGATGCTCAATCTGCTGCCGAA
GGAGTTGGATTGAGTACTCATTCTTTCCAAGAATTCAAAtcgaaaaagga
aaatgaaaccTCTTGCACATTCAATGTCCTGTCCTCTGCccaaacttcAG
AGTTCGAACAAGGTTTGGCGATGGCAGAGGGTCAGAATTGGGCTCGTGAT
TTGATGGAAACGCCTTCTAATTTCAAATATCCTGAACTGTTTGCTGACAA
AGTTGTTCAACGATTCTCGGCGTTCAAGAATGTTGATGTCATCGTCAGAG
ATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCTGTCAGTTGGT
AAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCATTACAACCAAAA
TGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGAtttatttttagtatgt
tgtcaacaaaaataaatcaattatCAAAAACAGTATTATTACgtaaactt
ttgattggaaacGTATCAGCACAATCTAAGAACCTACATGGTATAGTTGC
TGGCTGCTACCAAGCCCCAGGTGAAGATGGTGAAATTGTATTAACAGGGA
CGACTGAATCTCTTAACACTGAAACTGGTGGCAAACTTTTACAAGCGCTT
AACACTTCAAACTTTGATGGGAAACCTGGCAGCGTCCGAACATTCACGAA
TTTATCAGATAAATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAGA
ATTTGGATATTGATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAATGTA
CGGATTGGGGCTGGAgCGGGCGCCAAAGAGTTGAAGAAATACAAAGTGGA
CGTGATGTCATTGGATGATTGTGGAGATGCTCAATCTGCTGCCGAAGGAG
TTGGATTGAGTACTCATTCTTTCCAAGAATTCAAAtcgaaaaaggaaaat
gaaaccTCTTGCACATTCAATGTCCTGTCCTCTGCccaaacttcAGAGTT
CGAACAAGGTTTGGCGATGGCAGAGGGTCAGAATTGGGCTCGTGATTTGA
TGGAAACGCCTTCTAATTTCAAATATCCTGAACTGTTTGCTGACAAAGTT
GTTCAACGATTCTCGGCGTTCAAGAATGTTGATGTCATCGTCAGAGATGA
TGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCTGTCAGTTGGTAAAG
GTTCCGATAAGAAACCCATGTTTGTGGAACTTCATTACAACCAAAATGCA
GATGAACAAAAGAAAGTGGTTCTTGTTGGAtttatttttagtatgttgtc
aacaaaaataaatcaattatCAAAAACAGTATTATTACgtaaacttttga
ttggaaacGTATCAGCACAATCTAAGAACCTACATGGTATAGTTGCTGGC
TGCTACCAAGCCCCAGGTGAAGATGGTGAAATTGTATTAACAGGGACGAC
TGAATCTCTTAACACTGAAACTGGTGGCAAACTTTTACAAGCGCTTAACA
CTTCAAACTTTGATGGGAAACCTGGCAGCGTCCGAACATTCACGAATTTA
TCAGATAAATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAGAATTT
GGATATTGATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAATGTACGGA
TTGGGGCTGGAgCGGGCGCCAAAGAGTTGAAGAAATACAAAGTGGACGTG
ATGTCATTGGATGATTGTGGAGATGCTCAATCTGCTGCCGAAGGAGTTGG
ATTGAGTACTCATTCTTTCCAAGAATTCAAAtcgaaaaaggaaaatgaaa
ccTCTTGCACATTCAATGTCCTGTCCTCTGCccaaacttcAGAGTTCGAA
CAAGGTTTGGCGATGGCAGAGGGTCAGAATTGGGCTCGTGATTTGATGGA
AACGCCTTCTAATTTCAAATATCCTGAACTGTTTGCTGACAAAGTTGTTC
AACGATTCTCGGCGTTCAAGAATGTTGATGTCATCGTCAGAGATGATGTC
TGGGCGCGAGAGAAAGGAATGGATTGTTTCCTGTCAGTTGGTAAAGGTTC
CGATAAGAAACCCATGTTTGTGGAACTTCATTACAACCAAAATGCAGATG
AACAAAAGAAAGTGGTTCTTGTTGGAtttatttttagtatgttgtcaaca
aaaataaatcaattatCAAAAACAGTATTATTACgtaaacttttgattgg
aaacGTATCAGCACAATCTAAGAACCTACATGGTATAGTTGCTGGCTGCT
ACCAAGCCCCAGGTGAAGATGGTGAAATTGTATTAACAGGGACGACTGAA
TCTCTTAACACTGAAACTGGTGGCAAACTTTTACAAGCGCTTAACACTTC
AAACTTTGATGGGAAACCTGGCAGCGTCCGAACATTCACGAATTTATCAG
ATAAATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAGAATTTGGAT
ATTGATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAATGTACGGATTGG
GGCTGGAgCGGGCGCCAAAGAGTTGAAGAAATACAAAGTGGACGTGATGT
CATTGGATGATTGTGGAGATGCTCAATCTGCTGCCGAAGGAGTTGGATTG
AGTACTCATTCTTTCCAAGAATTCAAAtcgaaaaaggaaaatgaaaccTC
TTGCACATTCAATGTCCTGTCCTCTGCccaaacttcAGAGTTCGAACAAG
GTTTGGCGATGGCAGAGGGTCAGAATTGGGCTCGTGATTTGATGGAAACG
CCTTCTAATTTCAAATATCCTGAACTGTTTGCTGACAAAGTTGTTCAACG
ATTCTCGGCGTTCAAGAATGTTGATGTCATCGTCAGAGATGATGTCTGGG
CGCGAGAGAAAGGAATGGATTGTTTCCTGTCAGTTGGTAAAGGTTCCGAT
AAGAAACCCATGTTTGTGGAACTTCATTACAACCAAAATGCAGATGAACA
AAAGAAAGTGGTTCTTGTTGGAtttatttttagtatgttgtcaacaaaaa
taaatcaattatCAAAAACAGTATTATTACgtaaacttttgattggaaac
GTATCAGCACAATCTAAGAACCTACATGGTATAGTTGCTGGCTGCTACCA
AGCCCCAGGTGAAGATGGTGAAATTGTATTAACAGGGACGACTGAATCTC
TTAACACTGAAACTGGTGGCAAACTTTTACAAGCGCTTAACACTTCAAAC
TTTGATGGGAAACCTGGCAGCGTCCGAACATTCACGAATTTATCAGATAA
ATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAGAATTTGGATATTG
ATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAATGTACGGATTGGGGCT
GGAgCGGGCGCCAAAGAGTTGAAGAAATACAAAGTGGACGTGATGTCATT
GGATGATTGTGGAGATGCTCAATCTGCTGCCGAAGGAGTTGGATTGAGTA
CTCATTCTTTCCAAGAATTCAAAtcgaaaaaggaaaatgaaaccTCTTGC
ACATTCAATGTCCTGTCCTCTGCccaaacttcAGAGTTCGAACAAGGTTT
GGCGATGGCAGAGGGTCAGAATTGGGCTCGTGATTTGATGGAAACGCCTT
CTAATTTCAAATATCCTGAACTGTTTGCTGACAAAGTTGTTCAACGATTC
TCGGCGTTCAAGAATGTTGATGTCATCGTCAGAGATGATGTCTGGGCGCG
AGAGAAAGGAATGGATTGTTTCCTGTCAGTTGGTAAAGGTTCCGATAAGA
AACCCATGTTTGTGGAACTTCATTACAACCAAAATGCAGATGAACAAAAG
AAAGTGGTTCTTGTTGGAtttatttttagtatgttgtcaacaaaaataaa
tcaattatCAAAAACAGTATTATTACgtaaacttttgattggaaacGTAT
CAGCACAATCTAAGAACCTACATGGTATAGTTGCTGGCTGCTACCAAGCC
CCAGGTGAAGATGGTGAAATTGTATTAACAGGGACGACTGAATCTCTTAA
CACTGAAACTGGTGGCAAACTTTTACAAGCGCTTAACACTTCAAACTTTG
ATGGGAAACCTGGCAGCGTCCGAACATTCACGAATTTATCAGATAAATAC
CCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAGAATTTGGATATTGATGA
GAACGAGTGTTTGGACGAGCGCAAGGAAAATGTACGGATTGGGGCTGGAg
CGGGCGCCAAAGAGTTGAAGAAATACAAAGTGGACGTGATGTCATTGGAT
GATTGTGGAGATGCTCAATCTGCTGCCGAAGGAGTTGGATTGAGTACTCA
TTCTTTCCAAGAATTCAAAtcgaaaaaggaaaatgaaaccTCTTGCACAT
TCAATGTCCTGTCCTCTGCccaaacttcAGAGTTCGAACAAGGTTTGGCG
ATGGCAGAGGGTCAGAATTGGGCTCGTGATTTGATGGAAACGCCTTCTAA
TTTCAAATATCCTGAACTGTTTGCTGACAAAGTTGTTCAACGATTCTCGG
CGTTCAAGAATGTTGATGTCATCGTCAGAGATGATGTCTGGGCGCGAGAG
AAAGGAATGGATTGTTTCCTGTCAGTTGGTAAAGGTTCCGATAAGAAACC
CATGTTTGTGGAACTTCATTACAACCAAAATGCAGATGAACAAAAGAAAG
TGGTTCTTGTTGGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004579	XLOC_004579	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00008122-protein	TCONS_00008122-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000082	supercontig	sc0000082:452813..458556 +

Expression

No biomaterial libraries express this feature.

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR008283	Peptidase_M17_N
IPR000819	Peptidase_M17_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004177	aminopeptidase activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005622	intracellular
molecular_function	GO:0004177	aminopeptidase activity

Blast

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BLAST of TCONS_00008122 vs. Swiss-Prot (Human)
Match: AMPL (Cytosol aminopeptidase OS=Homo sapiens GN=LAP3 PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.895e-44
Identity = 93/250 (37.20%), Postives = 135/250 (54.00%), Query Frame = 1

Query:  106 GIVAGCYQAPGEDGEIVLTGTTESLNTETGGKLLQALNTSNFDGKPGSVRTFTNLSDKYPLLTVCGLGEENLDIDENECLDERKENVRIGAGAGAKELKKYKVDVMSLDDCGDAQSAAEGVGLSTHSFQEFKSKKENETSCTFNVLSSAQTSEFEQGLAMAEGQNWARDLMETPSNFKYPELFADKVVQRF-SAFKNVDVIVRDDVWAREKGMDCFLSVGKGSDKKPMFVELHY--NQNADEQKKVVLVG 846
            G+V G Y    ED     T   E+ +    GKL + LN S    K G  RTF  L   +P + + GLG++   IDE E   E KEN+R    AG ++++  ++  + +D CGDAQ+AAEG  L  + + + K KK+   S    +  S     +++G+  A GQN AR LMETP+N   P  FA+ + +   SA    +V +R   W  E+ M  FLSV KGSD+ P+F+E+HY  + NA+E   +V VG
Sbjct:   35 GLVLGIYSKEKEDDVPQFTSAGENFDKLLAGKLRETLNISGPPLKAGKTRTFYGLHQDFPSVVLVGLGKKAAGIDEQENWHEGKENIRAAVAAGCRQIQDLELSSVEVDPCGDAQAAAEGAVLGLYEYDDLKQKKKMAVSA--KLYGSGDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLKSASSKTEVHIRPKSWIEEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANE-PPLVFVG 281

The following BLAST results are available for this feature:

BLAST of TCONS_00008122 vs. Swiss-Prot (Human)

BLAST of TCONS_00008122 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AMPL	1.895e-44	37.20	Cytosol aminopeptidase OS=Homo sapiens GN=LAP3 PE=...	[more]

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TCONS_00008122 (transcript) - C. hemisphaerica