TCONS_00008104 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008104
Unique NameTCONS_00008104
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2472

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008104 ID=TCONS_00008104|Name=TCONS_00008104|organism=Clytia hemisphaerica|type=transcript|length=2472bp
ttttaatgttttcttttttctcttaatGTGGTGTGTTTCTCTTGTATAAT
GATCTGCTTTTATTTTCGAAGtacaaaatatatttcttctttagaaaaat
actaaaataagttaataataatTTTATATGTAAAGTCTATGAATATATCA
AGAATCTATCACAGATATGTATAGCAGatGGTTCCATCCTGGCGCAACAA
ATTCTCAAGCTGAAgagattttgaataaaaatggaGTTGATGGAAGTTTT
CTTGTTCGACCAAGTGAAAGCACAACTGGTGATTTTACCATATCTGTCAG
ACACAAAGGAGAAGTGACcaacatcaaaattcaaaacgatGGAGACTCTT
TCAGTATAAAAGGGGAATCAGAGTTCCAGTTTGCCACACTTTCAACCCTG
GTTGAGCATTATATGGCAAAACCGAAGTCTATTAAAGAGAAAAAGGGTGG
ATTCATTGAACTCTTATACCCAATTCGCTCAACAGACCCTACTTCAGAAA
GGTGGTTTCATGGAAGATTGAGCTCCAAAGAATGCGAACGTTTGTTACTA
GCCAAAGGGAAACAAGGGAGTTATTTAGTGCGAGAAAGTCAAAGCCAGCC
TGGTCAGTTTGCTTTAGCTGTTAGATGTAACAATGGTGTCCAACAAGTGA
TTATCACTCACAAAGAAGGCAAATTTGCGATCAAATCTGGAGCTTCATTT
TCATCACTGTCTGACCTGATCGATTATTATGTGGACAAACCAAAGCTTAG
AGATATTAAAGATGGCTCACCTATCAAATTAAGAGAACCTTACCAAAGCT
CAAGTTTCACAGTCACATCAATTGAAGACAGGATAAGAGTGctgagaaaa
gaaaacaaacgcGGTGTTACTGGATTCCGAGAAGAATTTGAGttACTGAA
TCGGTTCGACCAGAGTGAAACAGCCTATAGTACTCACGCCGGTTCGATGG
AAGAAAACAAATGGAAAAATAGATACAAAAACATATTACCATACGATCAT
TCAAGAGTCAtgttaaaaggagaaaagaCCAAAGACGTTTCAAGAGATTA
TATCAATGCAAATTATATCAATGCTGATTTGAAAACTTGGAAGACGCGAT
ACATTGCTGCTCAAGGATGTCTACCGAATACTTGCTCCGACTTTTGGCTC
ATGTTACACCAACACAACGTCAATGTTATCGTGATGCTGACCAACCTTga
agaaaaagggaaaaataagtgtgcaaaatattGGCCCGACTTAGGTCTGT
CTGAGGAATACGGAAGAATTATAGTTGATAACATGCTGGAACATAAATCG
AACTCATTCGTCGTCAGAGAACTCCGGGTTATTGACCAAGAAAAGCCTAA
GAAGCAACCAATGATGGTGTATCAATATCACTTCACGGAATGGCCTGATC
ACGGTGTCAGTGAGGATCCGGGTATTATTCTTGGTTTGTTGAATGAAATA
CATTTGAAACATGAATCTCTCTCCAGGAATTCACCTATTGTTGTTCATTG
CAGtGCAGGCATTGGGAGGACTGGTACGGTAATGGCAATTGATATTCTCA
TGCATTTGATCGACGAAAAAGGAATTGATTCTGAAATAGATATTTTGAGG
ACTTGCCAGTTGTTACGATCAGAAAGATCTGGAATGGTTCAGACGGAGGT
CCAATATCGATTTGTATATGAAGCAGTGAAACACTACCTGAGCACTGAAG
GCACAAGGGAAATAGCAAAGaagAAACAAGAACGAACAGGCTCTGTTAAA
ACTTCGTATGGCAATATCAACTTTGGGAAAGACGGCCCTAAGCTTGAGAG
TATGCCATCTTCACCTCCACCTGAGAAACCAGTGCCCAGACCCCCTGGTG
GACGCAAACATCTCGCTACTGGTGTCCCGCCCTCACGATCAAAAGCTGTT
AGcTTTGGCAAAGGGAACGCCAGGGTACGCGTTCAAACTGAGCCAGCACC
AAAGAATAAAGGCAGTAAATAATGAAATGGAATACGTATAAAATATTACC
AAAGAAAGATCTTGCTGGTCAAGGTTGAAATGGCTGGCCGCCATTTATGA
ATTCTATTGACTCAATTTATCGGGTCAGGTATTGTTACCATGGAGACGTA
CCAAAACAGCCTATCTATTTATTTGTCGTTTGGGCTTATTAAACAAAAGT
GATAGAATGATGACTTGGATTAAAATTCTCGTTgggctttttttttaatt
ttctattttttgttaTTGCAATATTTTCTATACTATTTTCTTACATTGTA
AAGTTAAATTTTCCAATCTCCAATAATATAGCGAGCATATTTAAAAACTT
TGTTATACTTTAGTTCTATAGATTTTTTATGATTAATTCAGATAATTTTT
ATTGTAcgttaaaaaattacagaaatctttaaaatttcacCAATTCGGTA
TTTTGGGAAGAGTGCCAAGGAAAATGAACTTGATAGAGAAGGTGCCGCAC
TATTATTGGCCGTTGCCGATca
Run BLAST on NCBI

transcript from alignment at sc0000082:247102..258046+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008104 ID=TCONS_00008104|Name=TCONS_00008104|organism=Clytia hemisphaerica|type=transcript|length=10945bp|location=Sequence derived from alignment at sc0000082:247102..258046+ (Clytia hemisphaerica)
ttttaatgttttcttttttctcttaatGTGGTGTGTTTCTCTTGTATAAT
GATCTGCTTTTATTTTCGAAGtacaaaatatatttcttctttagaaaaat
actaaaataagttaataataatTTTATATGTAAAGTCTATGAATATATCA
AGAATCTATCACAGATATGTATAGCAGGTAAGGATTATTATTATAATGAT
GCTCTTTTGTTTAATCCTcttaattttctgtttcaattcCTCTTTAACTA
AATTGCAATGTTAATTAGGGCTAAatgatgaaaactttttcttgCAATTC
TGTCAACAATTCAGTAGAAATTTGTCAACGTAGCATTGTCAAGACAATGT
CAacgaaaaattcgaaaaaaaatcgaaaatctacAGGGAGAGAGAGGTTT
GTTATGGATTTCTTTTAAcctttaaaaaagaagatttacaatcttttttt
cctttcattTAAAATGCTAAGATTCacagaaagaatttttttgatatttt
tagatGGTTCCATCCTGGCGCAACAAATTCTCAAGCTGAAgagattttga
ataaaaatggaGTTGATGGAAGTTTTCTTGTTCGACCAAGTGAAAGCACA
ACTGGTGATTTTACCATATCTGTCAGGTgacgatttttatttttatttaa
ttcttcAAATTTGATAGCTTTGCTCTTTTATTCCAAAAGATGTCGACTCC
AAATCAATTATTAATACCAAGTATTATCTTCttggttttcaagaaaatgt
caaCCAGCATTAGAGATGCTGAATTCAACCATCTCCATGAGTACTTTAAA
TGATTTTAAATGGCGCATAGGTAGTGACACACCTAGGTATCTGGTCAAAT
AACTAGTGTGATGTAGATTATCATTAACAATAAACCGTGCTGTGCTTTCA
TTTCATACTTCAGACACAAAGGAGAAGTGACcaacatcaaaattcaaaac
gatGGAGACTCTTTCAGTATAAAAGGGGAATCAGAGTTCCAGTTTGCCAC
ACTTTCAACCCTGGTTGAGCATTATATGGCAAAACCGAAGTCTATTAAAG
AGAAAAAGGGTGGATTCATTGAACTCTTATACCCAATTCGCTCAACAGAC
CCTACTTCAGAAAGGTTAATTTACATAATCAGTCCAAGTTTATTCTGTTT
TGTTTGGTATAAGTTGCATTTATCACTACAGTTTGCATTCCTTTAAGTAT
CCTTCTCAATATTGAATACTGATATTCTATCTAAAGCATTCCAAATCACT
ATGTTAAGGCTGTTGCGCCAGCTGTTACTTAAATTACGTTAGGTCGTTCT
CCTACGTTTTACCCTCATCTCAATAGCTTATTTATAAcaaatgaaaatct
aaatttcagGTGGTTTCATGGAAGATTGAGCTCCAAAGAATGCGAACGTT
TGTTACTAGCCAAAGGGAAACAAGGGAGTTATTTAGTGCGAGAAAGTCAA
AGCCAGCCTGGTCAGTTTGCTTTAGCTGTTAGATGTAACAATGGTGTCCA
ACAAGTGATTATCACTCACAAAGAAGGCAAATTTGCGATCAAATCTGGAG
CTTCATTTTCATCACTGTCTGACCTGATCGATTATTATGTGGACAAACCA
AAGCTTAGAGATATTAAAGATGGCTCACCTATCAAATTAAGAGAAGTATG
AATTACACTAACATTTGATTATCCTGGCTTATCgttcttttgataaaact
ttGTTTGTTTAGAATGTAGCTCAATTCGATCTGAAAACTTTAATTTCAAT
GCAATGGTAGGCTCTGTTAATGTCAATGCTAGCTGCATAACCTTGGATAT
CTTTTGATGAAAACTGATTTTTCGTCAGTAACCATAGTATTGTTTTTCTG
TCACTTTTTAGCCTTACCAAAGCTCAAGTTTCACAGTCACATCAATTGAA
GACAGGATAAGAGTGctgagaaaagaaaacaaacgcGGTGTTACTGGATT
CCGAGAAGAATTTGAGGTTTGAACTTATGTCCAtgagaatgttcttaact
ttgggGAAAATAAGATTCACTCCCAAGAGCCAGTACTATAGATAAGATAT
ACCGATGATTTTATATTCCTATTCATGTATCCAAACACATTTGGAACAGT
GTTTATAACTTTTCTGTCTGTAAAGTCAACTTGTCCAATTTACTTTTGCC
AGATCAGGGTTAAGCTCCAATTATGATTTGTTATTAATGTTTATTTAAAT
TCGAAAACCATTTTTGCAACACTGTTTAAAAGTTACAAATAATTTTAGCC
TTGGCTAATACTTCAATGTGGAATTTTTCACCGAATTGCGAAAAATATCA
TCATAATGTATGCATATTTCAGAAATGATTTTGATACATCTTTATACATG
ATGATGcttttttccttatttctttttcaaaatatttgaagtgTTACAGA
CCGACTTGTACTGTtgtgaattatttttagttACTGAATCGGTTCGACCA
GAGTGAAACAGCCTATAGTACTCACGCCGGTTCGATGGAAGAAAACAAAT
GGAAAAATAGATACAAAAACATATTACCATGTAAGATTTGTGTCTTGAGT
AAATATTACAGCAATTGTGAGTTCAGATTATCTAAGAAGATGCtgtttca
atgtttttcattaaTAACTCTGGTTACATTCCACAAAATAACATTGAGAT
CTGCACATGAAGACCATCATCTTCCGGTATCTTCACAGCccatttagaaa
ttttaacaaattttttatTCGTTTTTCAGACGATCATTCAAGAGTCAtgt
taaaaggagaaaagaCCAAAGACGTTTCAAGAGATTATATCAATGCAAAT
TATATCAATGTGAGATCTCGCCTTCTCGAAACTTCTTCGTGCTAACAAAG
ATTTAGACCTCGGGACCTTACATTTTGATTTTCTGGTTAGAAAACACTGA
TCCAATATATATTTTAAAAGCAGCTTCAATTTTGACCTACGATACGTTAA
TGAAAgaactttaaaaataaatcttctTTTATCTGCTAGGCTGATTTGAA
AACTTGGAAGACGCGATACATTGCTGCTCAAGGATGTCTACCGAATACTT
GCTCCGACTTTTGGCTCATGTTACACCAACACAACGTCAATGTTATCGTG
ATGCTGACCAACCTTgaagaaaaagggaaaaataagtgtgcaaaatattG
GCCCGACTTAGGTAATATCTCCACAACCTTTCCATAAATCTTTCTGGATA
GCCAGTAAAATATCCTCACTTTAAAATTCCCCCATTCGAATTTAATTTTA
TAACGTGGATCCTTCGTCTATGACACAGACACATTAGACCATTTTCAGCT
ATCGctactttttactcatttttatttttttggtttaCAGGTCTGTCTGA
GGAATACGGAAGAATTATAGTTGATAACATGCTGGAACATAAATCGAACT
CATTCGTCGTCAGAGAACTCCGGGTTATTGACCAAGAAAAGGTATTATGt
gaaaaaaagtatttatttccAAAGCTATTGAAGATGCTGTTTATATTTGG
GTGAAAAGCGACGACGATGGTTTAATCTGTAATTTTCATCAACTAAATGC
TCCTCGACTATAAATAAATAACCCTGTGATTTTGGGAgcatttttaaaat
tattgtATAATGGTGTTTAAAAAGTTCATTGTTAGCTGGCTTTTCTTAAA
TCCGTTCAATCTCGTTTGGGTgtagaaatttataaaaaaccGAACCTTTT
CTTTCCACCGCGTCCAATAAAAATTAGTGacgttttttttaaaccatGGT
CGTAAAACCGAACGATATTGTACGTGCAGCATTTTGATAACATGTATAAT
GTACCACCTTCCCTCTTGATTTAGCCTAAGAAGCAACCAATGATGGTGTA
TCAATATCACTTCACGGAATGGCCTGATCACGGTGTCAGTGAGGATCCGG
GTATTATTCTTGGTTTGTTGAATGAAATACATTTGAAACATGAATCTCTC
TCCAGGAATTCACCTATTGTTGTTCATTGCAGGTATTTTGTTGTCACATG
TCCTTAATAGGAGATTATGCAATATGAAAGTGCCTTTTGaattttccatg
attttttcatttttttaactaCCGTATACTTCGAaatattttcccttttt
taaatattttaatgctTGTTGTAATGGTAACAGATGGTAAGCTTTAAGTT
TATTCTTTTGCCTAAAACTCCACAGTCATATAAAATTAGCCATTCCATAA
GATATAATGAAGATATcacgaaattttttttaactttcaccACAATGCAA
TCCTTTCAAGTATGACTCAGTATTGAGCCAGAAAACAATATTTGATAATG
GTActacttttttgtttacagtGCAGGCATTGGGAGGACTGGTACGGTAA
TGGCAATTGATATTCTCATGCATTTGATCGACGAAAAAGGTAAAACTTTC
CTTTCAAAGCTTTGAAAGGGAAACCGTATCCTGTATAAGGGAGAAATTAC
TATTTCTTACTCCAGCATTCTGGTAATTTAAATTCCCATGTCCAAGAGAC
AACTTACGTTTTTTTTGATAGACTCGATCGGTCCGGTAAAAGTGGCCCAG
TGGTTTAAGAAGAGTCAAGGTCAAGATGCTTGCCCATAATATGGCATTTC
GCGTTTGTGCCTTCTTTTGTGTGAAATACATGGCGGATAAAGATACGAGT
AGTAAGACGGAAGTGAATGACGAATAAATGACGTGCGTCGTTTCTTTTAA
ATGACGTGCGACTCACTGATTGGTCCTTCCGGGAAGTGAAGCGAAATTCT
ACTTTTTCAGGGAATAAGAGAGGGAAAtaagtcttcattttccaaTTAAA
CGAAATCTTCTGCTTTAAGACCTCGCATATTGACCCCCAAAAGACATGGT
TACACAAAATGTCTCACTGTAGGTATTGCTACATATCTTCTCATTATTTT
TCAGGAATTGATTCTGAAATAGATATTTTGAGGACTTGCCAGTTGTTACG
ATCAGAAAGATCTGGAATGGTTCAGACGGAGGTTTGTTCAAATACATTAT
AATGGAACCTGtagaaattaaatgttttgaaCAAAATGACTGGTTTTTCC
AGTACCAAATCCTTGAAAACAAGTCTCCATTCTTCATTCTCTCCACTTAT
TTTTCAgtcgcgattttaattttttttttaaagatttttagagttttctt
ttgtcattggtccttcaattcaaaaatatttcgctTTAGGTCCAATATCG
ATTTGTATATGAAGCAGTGAAACACTACCTGAGCACTGAAGGCACAAGGG
AAATAGCAAAGaaggtattttatttcttaCTCACAGTGCCAACACGGTAA
TAGCACAATAGCCTCAGTCCAATAGCAAATAACGATTAAAATTGTAATTA
AAATATGatcttataataataataataataatgtatacaagttcaaggca
cacgagggcctctgagaaccggatcttgattacaattgtcttgtctcGAA
TCTTTTCGGATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNGGATTCTTgtccatttttttcttcagttctgcaagt
tcttttttctttgaatcagCTTCAGTCTTGCTAGCTTCACATTTCTTGAG
aatttctttctccttttcttCTTTCACCTTTATGATATTTTCACAGTTCG
TAACGTctctttttaatgatttgactTGTTGACTTGCAGAAGGATACTTG
TTGGCAATATTCTTTGACATTTCGACACAGTTTATGCAAATAAACTTGAT
GCCCTTCTTTTTATCTTTGATAAGCTGTATATAATAAGCTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCAGATGCAGA
GGGTGATGGTGATGGTGGACTGACTCGGCTACTGCGAAGAATCTTCTTCA
TCTTGGTTGATGGTGAaagaattttcgaaagattggtcaaaaatcataaa
tttttgaggaaaatttcaaaaattctgttCTTCAACATCTTCAACATCTT
TTTTGTTTCGCTTTTCATTGGCAAACCTTTATTTATCCATAGAAACAAGA
ACGAACAGGCTCTGTTAAAACTTCGTATGGCAATATCAACTTTGGGAAAG
ACGGCCCTAAGTAAGTTTTTCTATTCTTTGATAAAACTCTCCACTTTAGA
ACATTCCATCGAAAAAGATGAATAATGTTTTACCggactttttttatctt
cactCCAGGCTTGAGAGTATGCCATCTTCACCTCCACCTGAGAAACCAGT
GCCCAGACCCCCTGGTGGACGCAAACATCTCGTAAGTTTCAAAtagtttt
tcttcaaagaaagcTGTATACTTGTCTATGAGTTTTTGGTGGGATGAAAA
CAAACAGTTTCGATTGAGGATTGGTGGATCTTGGTTAGTGCTGAAGTGGT
GTtgttcaaaattcaatgttgaAGTTTTCCCTCTGAAGTTTACTGTATAT
TCTTGTTATAAGAAGAAtcaattaatttttctttgagcCTCTAATCATTC
TTATTCTGTTCGATCCATTTCTTAAAGTTTCCTGACTGTTTCATCGATGA
ATCAGAGAGCCGGCCATCAGATTATccatgaaaatatattttgacatCGT
ATTTTTTAGGCTACTGGTGTCCCGCCCTCACGATCAAAAGCTGTTAGGTA
TGAAATTTAATACTCTCTTATTTTATCTAAGTAAGATCTTAAATCAATGC
TCATTTTTAGCTTTAGCATGCCTTCATTTTATAACAGTAAtatttttcta
tcaattttcttcttcaagcTTTGGCAAAGGGAACGCCAGGGTACGCGTTC
AAACTGAGCCAGCACCAAAGAATAAAGGCAGTAAATAATGAAATGGAATA
CGTATAAAATGTAATGCACTAGTCACCTATCgtaagaaatttgttcttat
atgTTTTAATCTTGTCTTGTTGTagtttttaatataatttctcAAAAGTT
GTGATCTATACACTATTTCAGCACATAAATTAAATTGTTTTCGCTATTAG
TTAAATTTAGTAGTTATTCCACATCACAAAGCACATCATGTTACACACAC
TGAACCTCTTGTTTTAGATTACCAAAGAAAGATCTTGCTGGTCAAGGTTG
AAATGGCTGGCCGCCATTTATGAATTCTATTGACTCAATTTATCGGGTCA
GGTATTGTTACCATGGAGACGTACCAAAACAGCCTATCTATTTATTTGTC
GTTTGGGCTTATTAAACAAAAGTGATAGAATGATGACTTGGATTAAAATT
CTCGTTgggctttttttttaattttctattttttgttaTTGCAATATTTT
CTATACTATTTTCTTACATTGTAAAGTTAAATTTTCCAATCTCCAATAAT
ATAGCGAGCATATTTAAAAACTTTGTTATACTTTAGTTCTATAGATTTTT
TATGATTAATTCAGATAATTTTTATTGTAcgttaaaaaattacagaaatc
tttaaaatttcacCAATTCGGTATTTTGGGAAGAGTGCCAAGGAAAATGA
ACTTGATAGAGAAGGTGCCGCACTATTATTGGCCGTTGCCGATca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004572XLOC_004572Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008104-exon-sc0000082-1491911889:247102..247278TCONS_00008104-exon-sc0000082-1491911889:247102..247278Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:247102..247278TCONS_00008104-exon-sc0000082-1510915933:247102..247278Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:247102..247278TCONS_00008104-exon-sc0000082-1575043694:247102..247278Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:247605..247727TCONS_00008104-exon-sc0000082-1491911889:247605..247727Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:247605..247727TCONS_00008104-exon-sc0000082-1510915933:247605..247727Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:247605..247727TCONS_00008104-exon-sc0000082-1575043694:247605..247727Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:248015..248215TCONS_00008104-exon-sc0000082-1491911889:248015..248215Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:248015..248215TCONS_00008104-exon-sc0000082-1510915933:248015..248215Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:248015..248215TCONS_00008104-exon-sc0000082-1575043694:248015..248215Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:248461..248746TCONS_00008104-exon-sc0000082-1491911889:248461..248746Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:248461..248746TCONS_00008104-exon-sc0000082-1510915933:248461..248746Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:248461..248746TCONS_00008104-exon-sc0000082-1575043694:248461..248746Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:248963..249067TCONS_00008104-exon-sc0000082-1491911889:248963..249067Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:248963..249067TCONS_00008104-exon-sc0000082-1510915933:248963..249067Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:248963..249067TCONS_00008104-exon-sc0000082-1575043694:248963..249067Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:249532..249631TCONS_00008104-exon-sc0000082-1491911889:249532..249631Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:249532..249631TCONS_00008104-exon-sc0000082-1510915933:249532..249631Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:249532..249631TCONS_00008104-exon-sc0000082-1575043694:249532..249631Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:249831..249910TCONS_00008104-exon-sc0000082-1491911889:249831..249910Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:249831..249910TCONS_00008104-exon-sc0000082-1510915933:249831..249910Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:249831..249910TCONS_00008104-exon-sc0000082-1575043694:249831..249910Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:250091..250262TCONS_00008104-exon-sc0000082-1491911889:250091..250262Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:250091..250262TCONS_00008104-exon-sc0000082-1510915933:250091..250262Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:250091..250262TCONS_00008104-exon-sc0000082-1575043694:250091..250262Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:250442..250542TCONS_00008104-exon-sc0000082-1491911889:250442..250542Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:250442..250542TCONS_00008104-exon-sc0000082-1510915933:250442..250542Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:250442..250542TCONS_00008104-exon-sc0000082-1575043694:250442..250542Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:250926..251083TCONS_00008104-exon-sc0000082-1491911889:250926..251083Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:250926..251083TCONS_00008104-exon-sc0000082-1510915933:250926..251083Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:250926..251083TCONS_00008104-exon-sc0000082-1575043694:250926..251083Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:251423..251490TCONS_00008104-exon-sc0000082-1491911889:251423..251490Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:251423..251490TCONS_00008104-exon-sc0000082-1510915933:251423..251490Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:251423..251490TCONS_00008104-exon-sc0000082-1575043694:251423..251490Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:252006..252082TCONS_00008104-exon-sc0000082-1491911889:252006..252082Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:252006..252082TCONS_00008104-exon-sc0000082-1510915933:252006..252082Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:252006..252082TCONS_00008104-exon-sc0000082-1575043694:252006..252082Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:252291..252365TCONS_00008104-exon-sc0000082-1491911889:252291..252365Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:252291..252365TCONS_00008104-exon-sc0000082-1510915933:252291..252365Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:252291..252365TCONS_00008104-exon-sc0000082-1575043694:252291..252365Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:256544..256611TCONS_00008104-exon-sc0000082-1491911889:256544..256611Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:256544..256611TCONS_00008104-exon-sc0000082-1510915933:256544..256611Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:256544..256611TCONS_00008104-exon-sc0000082-1575043694:256544..256611Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:256710..256782TCONS_00008104-exon-sc0000082-1491911889:256710..256782Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:256710..256782TCONS_00008104-exon-sc0000082-1510915933:256710..256782Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:256710..256782TCONS_00008104-exon-sc0000082-1575043694:256710..256782Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:257111..257148TCONS_00008104-exon-sc0000082-1491911889:257111..257148Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:257111..257148TCONS_00008104-exon-sc0000082-1510915933:257111..257148Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:257111..257148TCONS_00008104-exon-sc0000082-1575043694:257111..257148Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:257270..257361TCONS_00008104-exon-sc0000082-1491911889:257270..257361Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:257270..257361TCONS_00008104-exon-sc0000082-1510915933:257270..257361Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:257270..257361TCONS_00008104-exon-sc0000082-1575043694:257270..257361Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1491911889:257569..258046TCONS_00008104-exon-sc0000082-1491911889:257569..258046Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1510915933:257569..258046TCONS_00008104-exon-sc0000082-1510915933:257569..258046Clytia hemisphaericaexon
TCONS_00008104-exon-sc0000082-1575043694:257569..258046TCONS_00008104-exon-sc0000082-1575043694:257569..258046Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:247102..258046 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.14071e-07	1.12284e-05	0.00279369	0.674896	1.0068e-07	1.81061e-10	2.23415e-09	0	0	0	0	0	0.0572613	0	0	3.92974e-10	1.05902e-06	3.13574e-09	4.45642e-06	6.48992e-10	4.75695e-06	3.84524e-08	2.52055e-08	0.00634634	0	0	2.37076e-05	1.70775e-08	0.000356098	5.26527e-05
Blast
[Close]
BLAST of TCONS_00008104 vs. Swiss-Prot (Human)
Match: PTN11 (Tyrosine-protein phosphatase non-receptor type 11 OS=Homo sapiens GN=PTPN11 PE=1 SV=2)

HSP 1 Score: 478.789 bits (1231), Expect = 2.186e-158
Identity = 265/555 (47.75%), Postives = 347/555 (62.52%), Query Frame = 2 
Query:  176 RWFHPGATNSQAEEILNKNGVDGSFLVRPSESTTGDFTISVRHKGEVTNIKIQNDGDSFSIKGESEFQFATLSTLVEHYMAKPKSIKEKKGGFIELLYPIRSTDPTSERWFHGRLSSKECERLLLAKGKQGSYLVRESQSQPGQFALAVRC-------NNG---VQQVIITHKEGKFAIKSGASFSSLSDLIDYYVDKPKLRDIKDGSPIKLREPYQSSSFTVTSIEDRIRVLRK---ENKRGVTGFREEFELLNRFDQSETAYSTHAGSMEENKWKNRYKNILPYDHSRVMLKGEKTKDVSRDYINANYINADLKTW------KTRYIAAQGCLPNTCSDFWLMLHQHNVNVIVMLTNLEEKGKNKCAKYWPDLGLSEEYGRIIVDNMLEHKSNSFVVRELRVIDQEKPKKQ---PMMVYQYHFTEWPDHGVSEDPGIILGLLNEIHLKHESLSRNSPIVVHCSAGIGRTGTVMAIDILMHLIDEKGIDSEIDILRTCQLLRSERSGMVQTEVQYRFVYEAVKHYLSTEGTREIAKKKQERTGSVKTSYGNINF 1774
            RWFHP  T  +AE +L   GVDGSFL RPS+S  GDFT+SVR  G VT+IKIQN GD + + G    +FATL+ LV++YM     +KEK G  IEL YP+   DPTSERWFHG LS KE E+LL  KGK GS+LVRESQS PG F L+VR        N+G   V  V+I  +E K+ +  G  F SL+DL+++Y   P +  +  G+ ++L++P  ++      IE R+R L K      +   GF EEFE L +  + +  YS   G  +ENK KNRYKNILP+DH+RV+L      +   DYINAN I  + +T       K  YIA QGCL NT +DFW M+ Q N  VIVM T   E+GK+KC KYWPD    +EYG + V N+ E  ++ + +REL++    +   Q      V+QYHF  WPDHGV  DPG +L  L E+H K ES+    P+VVHCSAGIGRTGT + IDIL+ +I EKG+D +ID+ +T Q++RS+RSGMVQTE QYRF+Y AV+HY+ T   R   ++K +R G     Y NI +
Sbjct:    5 RWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGE--KFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETL--GTVLQLKQPLNTTRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQ-QECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQALLQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQKSKRKGH---EYTNIKY 551
The following BLAST results are available for this feature:
BLAST of TCONS_00008104 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTN112.186e-15847.75Tyrosine-protein phosphatase non-receptor type 11 ... [more]
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