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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008085 ID=TCONS_00008085|Name=TCONS_00008085|organism=Clytia hemisphaerica|type=transcript|length=1372bp
ggatattttgtctgGGTGATAGTGAAAAACTGCAAAattgatgcttgtcc
ggggggtcaaaatttacaatgtcaagggggtaaatttccaaaaaatgtta
tatcttccaccccccatattcaaattttttctggaagagcccatttacGG
CAATGAATATTTGTAAAGAATTCGCCAGAGTTAATTTATCGCTCGCTGGC
CTAAGAATGACAAAGCTGCTTTCCTCAAAAGTAAAAATCCCAAATGCATG
CAAAATAACTTCAATATTCAAAGGTGGTTAACCCCGTGATTAACTTGTTT
TATGTGCGTtgcaaaataactttttcattcagaGGTGGTTAACTTGTTTT
ATGTGCTTTTATAATActttaaaacttaaaatcttGATAACAGCTGTTTG
ACCGAAAACTATTTCCAATCTGATAAAACAACAAACTCGAACAATGCTGT
ACAAAGACTTTCTTACTTTGATAAAAGAACAAAATCTTGACTGCCCGAAT
ACCAGACAAGAAACTCGTTTACACCTTTTCAAAGACCAGCAAGCTAACTT
CATCAAAAAGCCTCAGCAAATTTAGACCTTCCAGCTAGCCTCCAGCAATC
CTCCAAGTGTTTGATAAAGTCAACAttagtaaaaaactttttcagcccAT
TTTTAAATCCGAATCTCTCAAATAAAATCCGTCTTTATTTATACGAAAAT
TCAGCATTAAAACAATAGTTAGGAGTCTTTGGAACGTCACAAAGACGTTG
TATGGACGTCTGATAATGTTTATTAATTCATTGTTTATGATAATTGACTT
TTGTTTATACACCCATTTTGTTGTTTCGggtttcaaaatttgaaggcCTT
GGTCTCACTCTCTAAAATATGTTTCTAACAAAAACCTGTTGATGTTGAGT
TTCCAGTTTGTACTCAAGTTTTTTTTAACATCCAATCTGTTGTTTTGAAA
CAAACATGTAGAATGGTCTCACTATAGTGTTCATACTTTCATGTATATCT
TTAGAGTCATTTATTTAGTGAGTGAGGTCACAGATATTTTGATAAAGCTT
AATGACAATTAATGTTTATTAAGGATTTTCTTATCTTATCTATAAAGTTG
GATTTTAGATTTTGCACAGCAGTTGGACGGAGATTTTAATTAATCAATGG
TATATACTATAATTGGatggcttttataagaaaatcaacaaaaagcaAAT
AAGATGAGAGCATCCCTAGGTCGTCAAGCTCCTGGATATGTTGTATATTG
TTAAGTGCAAATTTAAGTAGAGATTTTTCCATACATTTTCCATAGTCTGA
CTTAAATGAGTCCAAGGTCCGCgattttcaaaagtcgagaATTTAAGCat
acacctctgtctcacagccccg Run BLAST on NCBI transcript from alignment at sc0000081:302912..304283 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008085 ID=TCONS_00008085|Name=TCONS_00008085|organism=Clytia hemisphaerica|type=transcript|length=1372bp|location=Sequence derived from alignment at sc0000081:302912..304283 (Clytia hemisphaerica)
cggggctgtgagacagaggtgtatGCTTAAATtctcgacttttgaaaatc
GCGGACCTTGGACTCATTTAAGTCAGACTATGGAAAATGTATGGAAAAAT
CTCTACTTAAATTTGCACTTAACAATATACAACATATCCAGGAGCTTGAC
GACCTAGGGATGCTCTCATCTTATTtgctttttgttgattttcttataaa
agccatCCAATTATAGTATATACCATTGATTAATTAAAATCTCCGTCCAA
CTGCTGTGCAAAATCTAAAATCCAACTTTATAGATAAGATAAGAAAATCC
TTAATAAACATTAATTGTCATTAAGCTTTATCAAAATATCTGTGACCTCA
CTCACTAAATAAATGACTCTAAAGATATACATGAAAGTATGAACACTATA
GTGAGACCATTCTACATGTTTGTTTCAAAACAACAGATTGGATGTTAAAA
AAAACTTGAGTACAAACTGGAAACTCAACATCAACAGGTTTTTGTTAGAA
ACATATTTTAGAGAGTGAGACCAAGgccttcaaattttgaaaccCGAAAC
AACAAAATGGGTGTATAAACAAAAGTCAATTATCATAAACAATGAATTAA
TAAACATTATCAGACGTCCATACAACGTCTTTGTGACGTTCCAAAGACTC
CTAACTATTGTTTTAATGCTGAATTTTCGTATAAATAAAGACGGATTTTA
TTTGAGAGATTCGGATTTAAAAATgggctgaaaaagttttttactaaTGT
TGACTTTATCAAACACTTGGAGGATTGCTGGAGGCTAGCTGGAAGGTCTA
AATTTGCTGAGGCTTTTTGATGAAGTTAGCTTGCTGGTCTTTGAAAAGGT
GTAAACGAGTTTCTTGTCTGGTATTCGGGCAGTCAAGATTTTGTTCTTTT
ATCAAAGTAAGAAAGTCTTTGTACAGCATTGTTCGAGTTTGTTGTTTTAT
CAGATTGGAAATAGTTTTCGGTCAAACAGCTGTTATCaagattttaagtt
ttaaagTATTATAAAAGCACATAAAACAAGTTAACCACCtctgaatgaaa
aagttattttgcaACGCACATAAAACAAGTTAATCACGGGGTTAACCACC
TTTGAATATTGAAGTTATTTTGCATGCATTTGGGATTTTTACTTTTGAGG
AAAGCAGCTTTGTCATTCTTAGGCCAGCGAGCGATAAATTAACTCTGGCG
AATTCTTTACAAATATTCATTGCCgtaaatgggctcttccagaaaaaatt
tgaatatggggggtggaagatataacattttttggaaatttacccccttg
acattgtaaattttgaccccccggacaagcatcaatTTTGCAGTTTTTCA
CTATCACCcagacaaaatatcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008085-exon-sc0000081-1491911889:302912..304283 | TCONS_00008085-exon-sc0000081-1491911889:302912..304283 | Clytia hemisphaerica | exon |
| TCONS_00008085-exon-sc0000081-1510915933:302912..304283 | TCONS_00008085-exon-sc0000081-1510915933:302912..304283 | Clytia hemisphaerica | exon |
| TCONS_00008085-exon-sc0000081-1575043694:302912..304283 | TCONS_00008085-exon-sc0000081-1575043694:302912..304283 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081 | supercontig | sc0000081:302912..304283 . |
Blast
The following BLAST results are available for this feature:
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