TCONS_00008081 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008081
Unique NameTCONS_00008081
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length215

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008081 ID=TCONS_00008081|Name=TCONS_00008081|organism=Clytia hemisphaerica|type=transcript|length=215bp
GTCTCGATCGTTTGGATAGCTCCCTGTAGTTCATGTCGATCCAGAAATAA
GTCTTTTCCTATCGCAGAGAACGACCTTGGGCAAAGTTTTATCATCGTCG
AGCTAGGCTTAAATCTTAGAAATACGAAGGAAATTTCCCAAAAAGCAATG
GTTATTGCTGAGAAAAGCCTTTTTCAATACGCAAATGGTATATCAAAGCC
ACCCCAAAATTTTCC
Run BLAST on NCBI

transcript from alignment at sc0000081:199657..199871

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008081 ID=TCONS_00008081|Name=TCONS_00008081|organism=Clytia hemisphaerica|type=transcript|length=215bp|location=Sequence derived from alignment at sc0000081:199657..199871 (Clytia hemisphaerica)
GGAAAATTTTGGGGTGGCTTTGATATACCATTTGCGTATTGAAAAAGGCT TTTCTCAGCAATAACCATTGCTTTTTGGGAAATTTCCTTCGTATTTCTAA GATTTAAGCCTAGCTCGACGATGATAAAACTTTGCCCAAGGTCGTTCTCT GCGATAGGAAAAGACTTATTTCTGGATCGACATGAACTACAGGGAGCTAT CCAAACGATCGAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004551XLOC_004551Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008081-exon-sc0000081-1491911889:199657..199871TCONS_00008081-exon-sc0000081-1491911889:199657..199871Clytia hemisphaericaexon
TCONS_00008081-exon-sc0000081-1510915933:199657..199871TCONS_00008081-exon-sc0000081-1510915933:199657..199871Clytia hemisphaericaexon
TCONS_00008081-exon-sc0000081-1575043694:199657..199871TCONS_00008081-exon-sc0000081-1575043694:199657..199871Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:199657..199871 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 16.2186 14.2402 5.15405 11.2587 2.25214 1.39482 1.35384 2.66989 8.88727 5.53771 9.1055 7.3287 1.00315 3.08459 1.42051 19.324 0 1.89058 0 1.39296 1.43472 6.40226 0 0 1.48318 1.51113
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008081 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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