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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008079 ID=TCONS_00008079|Name=TCONS_00008079|organism=Clytia hemisphaerica|type=transcript|length=1477bp
CTAAAAACTCGAAAACATTACTTTATCCCCGCATCCTTTACCTAAAAACT
CGAAAACATTGCTTTATCCCCGCATCCTTTACCTAAAAACTCGAAAACAT
TACTTTATCCCCGCATCCTTTACCTAAAAACTCGAAAACATTGCTTTATC
CCTGCATCCTTTTCCTAAAAACTCGAAAACATTACTTTATCCCTGCATCC
TTTTCCTAAAAACTCGAAAACATTTCTTTATCCCCGCATCCTTTACCTAA
AAACTCGAAAATATTGCTTTATCCCCGCATCCTTTACCTAAAAACTCGAA
AACATTTCTTTATCCCCGCATCCTTTACTTAAAAACTCGAAAACATTTCT
TTATCCCCGCATCCTTTACCTAAAAACTCGAAAACATTTCTTTATCCCCG
CATCCTTTACTTAAAAACTCGAAAACATTTCTTTATCCCCGCATCCTTTA
CTTAAAAACTCGAAAACATTGCTTTATCCCCGCATCCTTTACCTAAAAAC
tcgaaaatattattttatcccCGCATCCTTTACCTAAAAACTCGAAAACA
TTACTTTATCCCCGCATCCTTTACCTAAAAACTCGAAAACATTACTTTAT
CCCTGCATCCTTTTCATAAAAACTCGAAAACATTACTTTATCCCCGCATC
CTTTACCTAAAAACTCGAAAACATTGCTTTATCCCCGCATCCTTTACcta
aaaacacgaaaatattgtttttatcCCCGCATCCTTTACCTAAAAACTcg
aaaatattgtttttatcCCCGCATCCCTTACCTAAAAACTCGAAAACATT
TCTTTATCCCCGCATCCTTTACCTAAAAACTcgaaaatattgtttttatc
CCCGCATCCCTTACCTAAAAACTCGAAAACATTTCTTTATCCCCGCATCC
TTTACCTAAAAACTcgaaaatattgtttttatcCCCGCATCCTTTATCTA
AAAACTcgaaaatattgtttttatcCCCGTTTGTACGCTCCATCTAAAAG
AATCGCATTGAATTCTACGTCATTCTAACCTTCAaataagaatcaaaaca
atGCTCTAAGACGCACGTACGGTTGATTATTTGTTCGCGCGGGCGAACTA
TATGACATGGTTGAATGCTTTTCGAACGTTTCGAACGTTTACACAAACCG
CACTAATTAGGTCACACTTGACTgaagaaaacataaaaaattctttcaag
AGAACTTTTGAGAAATGTGATATACTAGAACAGTGGGTTTTTAAAATACA
CATCTTCGGTTTAATTTGATAATaagtttgttaaaaatattgttgagata
ataagtgaaataattttagagaaatttttaaGAGTGTTTTTTAAGACATT
ATTCTTGATaattataattgagttttgcaGTGATTGAATTTTGAGACTTT
ATATAAGCAATTATtgaatttaatttgaatttttttgcgttAATTGGTTC
ATTTTTGTCTTCTTCATCGCGGAATGa Run BLAST on NCBI transcript from alignment at sc0000081:168546..170022 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008079 ID=TCONS_00008079|Name=TCONS_00008079|organism=Clytia hemisphaerica|type=transcript|length=1477bp|location=Sequence derived from alignment at sc0000081:168546..170022 (Clytia hemisphaerica)
tCATTCCGCGATGAAGAAGACAAAAATGAACCAATTaacgcaaaaaaatt
caaattaaattcaATAATTGCTTATATAAAGTCTCAAAATTCAATCACtg
caaaactcaattataattATCAAGAATAATGTCTTAAAAAACACTCttaa
aaatttctctaaaattatttcacttattatctcaacaatatttttaacaa
acttATTATCAAATTAAACCGAAGATGTGTATTTTAAAAACCCACTGTTC
TAGTATATCACATTTCTCAAAAGTTCTcttgaaagaattttttatgtttt
cttcAGTCAAGTGTGACCTAATTAGTGCGGTTTGTGTAAACGTTCGAAAC
GTTCGAAAAGCATTCAACCATGTCATATAGTTCGCCCGCGCGAACAAATA
ATCAACCGTACGTGCGTCTTAGAGCattgttttgattcttattTGAAGGT
TAGAATGACGTAGAATTCAATGCGATTCTTTTAGATGGAGCGTACAAACG
GGgataaaaacaatattttcgAGTTTTTAGATAAAGGATGCGGGgataaa
aacaatattttcgAGTTTTTAGGTAAAGGATGCGGGGATAAAGAAATGTT
TTCGAGTTTTTAGGTAAGGGATGCGGGgataaaaacaatattttcgAGTT
TTTAGGTAAAGGATGCGGGGATAAAGAAATGTTTTCGAGTTTTTAGGTAA
GGGATGCGGGgataaaaacaatattttcgAGTTTTTAGGTAAAGGATGCG
GGgataaaaacaatattttcgtgtttttagGTAAAGGATGCGGGGATAAA
GCAATGTTTTCGAGTTTTTAGGTAAAGGATGCGGGGATAAAGTAATGTTT
TCGAGTTTTTATGAAAAGGATGCAGGGATAAAGTAATGTTTTCGAGTTTT
TAGGTAAAGGATGCGGGGATAAAGTAATGTTTTCGAGTTTTTAGGTAAAG
GATGCGgggataaaataatattttcgaGTTTTTAGGTAAAGGATGCGGGG
ATAAAGCAATGTTTTCGAGTTTTTAAGTAAAGGATGCGGGGATAAAGAAA
TGTTTTCGAGTTTTTAAGTAAAGGATGCGGGGATAAAGAAATGTTTTCGA
GTTTTTAGGTAAAGGATGCGGGGATAAAGAAATGTTTTCGAGTTTTTAAG
TAAAGGATGCGGGGATAAAGAAATGTTTTCGAGTTTTTAGGTAAAGGATG
CGGGGATAAAGCAATATTTTCGAGTTTTTAGGTAAAGGATGCGGGGATAA
AGAAATGTTTTCGAGTTTTTAGGAAAAGGATGCAGGGATAAAGTAATGTT
TTCGAGTTTTTAGGAAAAGGATGCAGGGATAAAGCAATGTTTTCGAGTTT
TTAGGTAAAGGATGCGGGGATAAAGTAATGTTTTCGAGTTTTTAGGTAAA
GGATGCGGGGATAAAGCAATGTTTTCGAGTTTTTAGGTAAAGGATGCGGG
GATAAAGTAATGTTTTCGAGTTTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008079-exon-sc0000081-1491911889:168546..170022 | TCONS_00008079-exon-sc0000081-1491911889:168546..170022 | Clytia hemisphaerica | exon |
| TCONS_00008079-exon-sc0000081-1510915933:168546..170022 | TCONS_00008079-exon-sc0000081-1510915933:168546..170022 | Clytia hemisphaerica | exon |
| TCONS_00008079-exon-sc0000081-1575043694:168546..170022 | TCONS_00008079-exon-sc0000081-1575043694:168546..170022 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081 | supercontig | sc0000081:168546..170022 . |
Blast
The following BLAST results are available for this feature:
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