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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008003 ID=TCONS_00008003|Name=TCONS_00008003|organism=Clytia hemisphaerica|type=transcript|length=756bp
caTAAACATGTTTGAGTGTTTGAGAGTATTTTGACTTGACTTCATGTtat
gtttttcttatctttaccaCCACAAAATTATTCAACAGAATATAATTTAT
AAACTATTttcaagcataaaaatatttggctgaatgcaaattttgtacaa
attttattttcagaCAGTGCTTTAGGCATCATAACTTTGCCTGAAAATGC
AATGACTACAAAGTGGATTTGTACCGTCAagggctctaacttgggacagt
ctGACAAAACATGGGACAGCAATTCGGCAATCATTTTACCGAACCTCTAT
ATACCTATTAAAAGTCATTTTAAATTAACATAGTCCCAAAtcatagaaaa
caaacttgttgtcaacagAGATTTAACAGTGTAAAAACAGTTCAGAAAGT
CAACCATCCCATGATAtgacactcgtcccaagttagagccgttgacggta
tgccggatatccaaaacaataacaatccatTATNNGAAATCAGTCACGTT
TATAACATTATAACTCGGTCTTTGACGACTGGGAAGATTCAAcgacaaaa
ttttgagagttaaagTAAAGTTTATCCCAAAGTTTATCCCTCAGCGCAGT
CAGTGATGAATCCGATCTGACCGTTAGTGTCTCTCCAGCCatttttgaga
tgaataaaatgaatcatgaaatttttgttatctaaagggatgggtgaaac
caTGTTTGAATGAGCCTATATCTTGGGATATCTCTCTCATATCAAAACTG
TTCAAT Run BLAST on NCBI transcript from alignment at sc0000081:496819..497716+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008003 ID=TCONS_00008003|Name=TCONS_00008003|organism=Clytia hemisphaerica|type=transcript|length=898bp|location=Sequence derived from alignment at sc0000081:496819..497716+ (Clytia hemisphaerica)
caTAAACATGTTTGAGTGTTTGAGAGTATTTTGACTTGACTTCATGTtat
gtttttcttatctttaccaCCACAAAATTATTCAACAGAATATAATTTAT
AAACTATTttcaagcataaaaatatttggctgaatgcaaattttgtacaa
attttatatatttaaatgataaagtaaaaacatctctcaaattttttatt
ataatcctTTGTGACAGTACTTTTTCTGTTGGGAAGTTGGAAGCTTTTCC
ACCGAACAGAATCGAGCACTGATAACtaataatccaaataaaaaaatact
ttcagaCAGTGCTTTAGGCATCATAACTTTGCCTGAAAATGCAATGACTA
CAAAGTGGATTTGTACCGTCAagggctctaacttgggacagtctGACAAA
ACATGGGACAGCAATTCGGCAATCATTTTACCGAACCTCTATATACCTAT
TAAAAGTCATTTTAAATTAACATAGTCCCAAAtcatagaaaacaaacttg
ttgtcaacagAGATTTAACAGTGTAAAAACAGTTCAGAAAGTCAACCATC
CCATGATAtgacactcgtcccaagttagagccgttgacggtatgccggat
atccaaaacaataacaatccatTATNNGAAATCAGTCACGTTTATAACAT
TATAACTCGGTCTTTGACGACTGGGAAGATTCAAcgacaaaattttgaga
gttaaagTAAAGTTTATCCCAAAGTTTATCCCTCAGCGCAGTCAGTGATG
AATCCGATCTGACCGTTAGTGTCTCTCCAGCCatttttgagatgaataaa
atgaatcatgaaatttttgttatctaaagggatgggtgaaaccaTGTTTG
AATGAGCCTATATCTTGGGATATCTCTCTCATATCAAAACTGTTCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008003-exon-sc0000081-1491911889:496819..496975 | TCONS_00008003-exon-sc0000081-1491911889:496819..496975 | Clytia hemisphaerica | exon |
| TCONS_00008003-exon-sc0000081-1510915933:496819..496975 | TCONS_00008003-exon-sc0000081-1510915933:496819..496975 | Clytia hemisphaerica | exon |
| TCONS_00008003-exon-sc0000081-1575043694:496819..496975 | TCONS_00008003-exon-sc0000081-1575043694:496819..496975 | Clytia hemisphaerica | exon |
| TCONS_00008003-exon-sc0000081-1491911889:497118..497716 | TCONS_00008003-exon-sc0000081-1491911889:497118..497716 | Clytia hemisphaerica | exon |
| TCONS_00008003-exon-sc0000081-1510915933:497118..497716 | TCONS_00008003-exon-sc0000081-1510915933:497118..497716 | Clytia hemisphaerica | exon |
| TCONS_00008003-exon-sc0000081-1575043694:497118..497716 | TCONS_00008003-exon-sc0000081-1575043694:497118..497716 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081 | supercontig | sc0000081:496819..497716 + |
Blast
The following BLAST results are available for this feature:
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