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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007969 ID=TCONS_00007969|Name=TCONS_00007969|organism=Clytia hemisphaerica|type=transcript|length=772bp
GTTGGATGTAACAAATAACTCCAAAATGTGGATGGAAACATATATCGTAT
TTGGTTTAATTATCTCATGCTTCAATATTCTACAAATCATAGTCATctat
aaaatcaacaaaaaaatcccaaaatccaTGATCTTCATTTTGAATCTATC
CTGCTCCGATTTGTTTGTTGGAGGAGTCGTAGCTTTGTCCGCCATTTTGA
GAATAATTGTACCACCTCAAAATGAAGGTCTCTTTATCCAAACTTTGAGA
TATTGTGGATTGAGGATTGGACTTGTGATATCTTTGGGAAACTTGGTGCT
GATTGCTTTCGATCGCTTATTAAGTGTTGTTTACCCATTCAAATATCCAC
TCATACCTCGGAGGAGGtttatcatttttattgttATCATTTGGAGTATA
TCAATAGCTTCGCCTTTAATCTGGTTTGTTGTTTTGTCAGAAGCAGATCC
TGAGATATTCTTCAGGAAAAGTAACATTGGATTTCCTATATTAACGATTT
TCGCAATctcggaaatgattttttcgtACGTTTTTATATGGTTTCGTATT
CGtcgacaaaaccgaaaattcgcTATACGAGATACCGAAAACCGAGAATA
TTCGGCGGCCGAGAAAAAACGACTATTACAAGAGACGAAGATAGCGAAAC
TGGCAACGACAATTATTGTTTGTTTCAGCGTTTTTAGTTTACCCCATACC
TTGGTATCGCTTTTAAGCGAGGTAGCTTCAATTGAAATACACAGCTCTGT
GCGATATCTTGTAACGTTATTG Run BLAST on NCBI protein sequence of TCONS_00007969-protein >TCONS_00007969-protein ID=TCONS_00007969-protein|Name=TCONS_00007969-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
LDVTNNSKMWMETYIVFGLIISCFNILQIIVIYKINKKIPKSMIFILNLS
CSDLFVGGVVALSAILRIIVPPQNEGLFIQTLRYCGLRIGLVISLGNLVL
IAFDRLLSVVYPFKYPLIPRRRFIIFIVIIWSISIASPLIWFVVLSEADP
EIFFRKSNIGFPILTIFAISEMIFSYVFIWFRIRRQNRKFAIRDTENREY
SAAEKKRLLQETKIAKLATTIIVCFSVFSLPHTLVSLLSEVASIEIHSSV
RYLVTLL Run BLAST on NCBI transcript from alignment at sc0000080:300015..300786 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007969 ID=TCONS_00007969|Name=TCONS_00007969|organism=Clytia hemisphaerica|type=transcript|length=772bp|location=Sequence derived from alignment at sc0000080:300015..300786 (Clytia hemisphaerica)
CAATAACGTTACAAGATATCGCACAGAGCTGTGTATTTCAATTGAAGCTA
CCTCGCTTAAAAGCGATACCAAGGTATGGGGTAAACTAAAAACGCTGAAA
CAAACAATAATTGTCGTTGCCAGTTTCGCTATCTTCGTCTCTTGTAATAG
TCGTTTTTTCTCGGCCGCCGAATATTCTCGGTTTTCGGTATCTCGTATAg
cgaattttcggttttgtcgaCGAATACGAAACCATATAAAAACGTacgaa
aaaatcatttccgagATTGCGAAAATCGTTAATATAGGAAATCCAATGTT
ACTTTTCCTGAAGAATATCTCAGGATCTGCTTCTGACAAAACAACAAACC
AGATTAAAGGCGAAGCTATTGATATACTCCAAATGATaacaataaaaatg
ataaaCCTCCTCCGAGGTATGAGTGGATATTTGAATGGGTAAACAACACT
TAATAAGCGATCGAAAGCAATCAGCACCAAGTTTCCCAAAGATATCACAA
GTCCAATCCTCAATCCACAATATCTCAAAGTTTGGATAAAGAGACCTTCA
TTTTGAGGTGGTACAATTATTCTCAAAATGGCGGACAAAGCTACGACTCC
TCCAACAAACAAATCGGAGCAGGATAGATTCAAAATGAAGATCAtggatt
ttgggatttttttgttgattttatagATGACTATGATTTGTAGAATATTG
AAGCATGAGATAATTAAACCAAATACGATATATGTTTCCATCCACATTTT
GGAGTTATTTGTTACATCCAAC Coding sequence (CDS) from alignment at sc0000080:300015..300786 >TCONS_00007969 ID=TCONS_00007969|Name=TCONS_00007969|organism=Clytia hemisphaerica|type=CDS|length=771bp|location=Sequence derived from alignment at sc0000080:300015..300786 (Clytia hemisphaerica)
CAATAACGTTACAAGATATCGCACAGAGCTGTGTATTTCAATTGAAGCTA
CCTCGCTTAAAAGCGATACCAAGGTATGGGGTAAACTAAAAACGCTGAAA
CAAACAATAATTGTCGTTGCCAGTTTCGCTATCTTCGTCTCTTGTAATAG
TCGTTTTTTCTCGGCCGCCGAATATTCTCGGTTTTCGGTATCTCGTATAg
cgaattttcggttttgtcgaCGAATACGAAACCATATAAAAACGTacgaa
aaaatcatttccgagATTGCGAAAATCGTTAATATAGGAAATCCAATGTT
ACTTTTCCTGAAGAATATCTCAGGATCTGCTTCTGACAAAACAACAAACC
AGATTAAAGGCGAAGCTATTGATATACTCCAAATGATaacaataaaaatg
ataaaCCTCCTCCGAGGTATGAGTGGATATTTGAATGGGTAAACAACACT
TAATAAGCGATCGAAAGCAATCAGCACCAAGTTTCCCAAAGATATCACAA
GTCCAATCCTCAATCCACAATATCTCAAAGTTTGGATAAAGAGACCTTCA
TTTTGAGGTGGTACAATTATTCTCAAAATGGCGGACAAAGCTACGACTCC
TCCAACAAACAAATCGGAGCAGGATAGATTCAAAATGAAGATCAtggatt
ttgggatttttttgttgattttatagATGACTATGATTTGTAGAATATTG
AAGCATGAGATAATTAAACCAAATACGATATATGTTTCCATCCACATTTT
GGAGTTATTTGTTACATCCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007969-exon-sc0000080-1491911889:300015..300786 | TCONS_00007969-exon-sc0000080-1491911889:300015..300786 | Clytia hemisphaerica | exon |
| TCONS_00007969-exon-sc0000080-1510915933:300015..300786 | TCONS_00007969-exon-sc0000080-1510915933:300015..300786 | Clytia hemisphaerica | exon |
| TCONS_00007969-exon-sc0000080-1575043694:300015..300786 | TCONS_00007969-exon-sc0000080-1575043694:300015..300786 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080 | supercontig | sc0000080:300015..300786 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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