TCONS_00007963 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00007963
Unique Name	TCONS_00007963
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2823

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000080:709668..713741-
coding sequence from alignment at sc0000080:709668..713741-

transcript sequence

>TCONS_00007963 ID=TCONS_00007963|Name=TCONS_00007963|organism=Clytia hemisphaerica|type=transcript|length=2823bp
TAGAACCTAAGAAATCTGTCTAATTAGgatttttcctttcaaaacgTCTC
GCCCCTCTTTGACATAATTTCCTGGCCATTAACTTaaaaccttatttatt
ttttcagtgatgtaaaatttgaaaatcatgaaatataaaTAATAACAGAC
AACACCATGAATGACAATTTCACCATGGAGACTAGAAAGGTTATACATGA
AGGATTCTTGAAGAAGTCTCCACCtcaagcaaaaattgaaaaaggctTCA
AGTGGCACAAGAGATATTTTCGACTATGTTCTGACAAAACACTGGAATAc
tacaaagaaaagaaagaaaagaagccTTTAAAAGAACCTATCGATTTGAG
AAATTGTCAAAATGTTGTACCTGACCCAAATGAAGAAGAATTCAAAATCA
GTGGTGTAAAGTTTGGTGAGAAATGGCGTTGGTTCTTCAAACTTGAGACA
CCTGAACGAACTTATCATTTCATCGCTTCCACTAAAAGTGACATGAATCA
ATGGATCGAGAAAATTAACATGttgaatcaaaatcaatttacagaTTCAG
ATGGAATAGAGCTACCTAACCGATCAAACTCATTATCAAGTGCTGTATCC
ACAACAAGTAGTAGTTCTAATATGTCCTCTCCCGTTATGGTCAGGACCAG
TCCAAGTTCTCGGAGACCATCAAACCAATCTGCATCAAGATCAAGAGCTA
GTTCAGCTCATTCTCAAGAACATTATCGAGTACCAGGAATATCCAATAGA
TTCAATACTACACCAGCATCTGAAATGTTCGCAAAGGTAACTGTTGAATT
GCCTCGCACATTGATTTCCCATGCGCCAATCCAATCAGATGTTGGTACCA
CCCCGGATGGATATGATATTTTAGATGTGGTCAATCAAACTGATCATGAA
GATATTTATAAAGTTCCTATCAATAATACACCCTCCTCATCTTACTCCAT
ACCACCCAATCGACCAGTACCTATTCCCAAACAATCAACCTCCAAACCGC
CGCCACCACTTCCAAACCCAGCAACTAAACAAGCTCCAACACGAACACCT
GATTTTGGAATGATAGGTTACGAAAAAATGGAtcccaaaaatgaaaaaca
acaacaacaacagcatcaTCAAGATTCAGATTCTTATGAACTTTCTTATT
ATCCTATGAGACCAAAGGATGAACTGCCATCTAGAACACACACAGGACCA
AGTCCTGAAAAGAAATTCACAACAATGCCATGGATGCTAAGAGATACAAA
TTCACAAAAATCTTCCTCTCTTCCACGCCATCATGTTGCGACACCGGATG
TCCCACCAAAAAGAGAAGATCCATCCTTCTCTGAAATACCAAGTGTTACA
CCTAAATCCCCTAATGATAGTGAAGACCCACCTCCTGTGCAGCGAGAAAC
AAAGCCTAATTTGCCACCGCGTGTTGACCGTGCAAAGAAGCCGTCCTCTT
CTACTTTACCACCACACTGGCGTCTGCAAGGGGAAGATAGTTTTGATGGT
ATGCCTAAACCAAGTTATTATAATATTTATGACGATGATAATACAAACTC
TGAGCCATTACTTGGCTATAACGAACTACCAAATCTGTCATCACGTCCTG
ATCCTTACCAACAACACCAATTAACTAACAACAGCACGACTGCACTTAAC
GATACAACTGTAACTCTTGACTCAGATGGTAATAAACTAACTGTTGATAA
AATTGCACATATCAATATAAAAATCGCACCAGATAATACACGACCAGTAC
CACCTACACCAGAACAAAACACTACATATGAGAATTCATCTTCTCCAGCA
CGTAAAGTCTCCTCTGCATCAAACTCATCAAAAGTCTCATATGAGAATGA
TGATGCTTTTGATGGGATcagttatgaaaattttaaggacAGGCCGAAGC
GACCTTTGCTGTACTCTCCAGTTGAAGGCAATCGATACAACTCTCAATCT
TCTGAAGAAGCCAGAGAAAGAGAGGTGGAGATCGAAGAATCCGAACCTGG
TAGTGGTCACTACCTTATTGTTGATGTCACAGCCACCAAAGCTGTTGAAG
GCGGTTTGGTTAACCGGGAAAGTCCTATAAATTGTGCCAGATGAGAGTAa
aatgaaatttgttttgaatttaagTTACAGTTTTATTGGAAAAGGCTTTT
ATTTAACATACCTTGATGAAGTGTCGATCATTTCAACAACAGACCTTTTG
GCCTTTTTGTTCATATGTATTTTTACCTTATAATAATGCATACTACAGTA
TTAAAAAATGATGTACTATaattctaaaaacattttttaccaATGATTTA
CTTTGTTTTGTAATTTTATACCTTTTTTACTGAATtctataatttatttt
tgtgtaaTGATTCATTTNAAAACATTTTTTACCAATGATTTACTTTGTTT
TGTAATTTTATACCTTTTTTACTGAATtctataatttatttttgtgtaaT
GATTCATTTTAATATAATCACTTTTCTATCAAACTTATTTTTGAGGATTT
ATCTCTATTTTTGTAGTGATTTTTTATGGAATATAATCAAATTTATTTCg
tattgttttgtatttttattgaaGTATTTTCAGTGTCTAAAACAAAACTA
GAGTACCTCGATCGTGTCTCATGATAAGTTAGTTAAATTGAACCCTAAGG
AAGGACCAGAAAAGACAGACCTGGTATGGGTCCAAGTTTTAATAACTTTA
TATCCGTTTTCAcattatttttagaaattttctataaaaatatctTGTAC
ATAGCTAACGTATTTTTTGTTCCTGTCAAAATATTATTATTGCAAATTTA
ACAAATTGCGGGAAAAACTCAAA

Run BLAST on NCBI

protein sequence of TCONS_00007963-protein

>TCONS_00007963-protein ID=TCONS_00007963-protein|Name=TCONS_00007963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=645bp
MNDNFTMETRKVIHEGFLKKSPPQAKIEKGFKWHKRYFRLCSDKTLEYYK
EKKEKKPLKEPIDLRNCQNVVPDPNEEEFKISGVKFGEKWRWFFKLETPE
RTYHFIASTKSDMNQWIEKINMLNQNQFTDSDGIELPNRSNSLSSAVSTT
SSSSNMSSPVMVRTSPSSRRPSNQSASRSRASSAHSQEHYRVPGISNRFN
TTPASEMFAKVTVELPRTLISHAPIQSDVGTTPDGYDILDVVNQTDHEDI
YKVPINNTPSSSYSIPPNRPVPIPKQSTSKPPPPLPNPATKQAPTRTPDF
GMIGYEKMDPKNEKQQQQQHHQDSDSYELSYYPMRPKDELPSRTHTGPSP
EKKFTTMPWMLRDTNSQKSSSLPRHHVATPDVPPKREDPSFSEIPSVTPK
SPNDSEDPPPVQRETKPNLPPRVDRAKKPSSSTLPPHWRLQGEDSFDGMP
KPSYYNIYDDDNTNSEPLLGYNELPNLSSRPDPYQQHQLTNNSTTALNDT
TVTLDSDGNKLTVDKIAHINIKIAPDNTRPVPPTPEQNTTYENSSSPARK
VSSASNSSKVSYENDDAFDGISYENFKDRPKRPLLYSPVEGNRYNSQSSE
EAREREVEIEESEPGSGHYLIVDVTATKAVEGGLVNRESPINCAR

Run BLAST on NCBI

transcript from alignment at sc0000080:709668..713741-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00007963 ID=TCONS_00007963|Name=TCONS_00007963|organism=Clytia hemisphaerica|type=transcript|length=4074bp|location=Sequence derived from alignment at sc0000080:709668..713741- (Clytia hemisphaerica)
TAGAACCTAAGAAATCTGTCTAATTAGGATTTTTCCTTTCAAAACGTCTC
GCCCCTCTTTGACATAATTTCCTGGCCATTAACTTAAAACCTTATTTATT
TTTTCAGTGATGTAAAATTTGAAAATCATGAAATATAAATAATAACAGAC
AACACCATGAATGACAATTTCACCATGGAGACTAGAAAGGTTATACATGA
AGGATTCTTGAAGAAGTCTCCACCTCAAGCAAAAATTGAAAAAGGCTTCA
AGGTAAGCAAGCTTATAAGCTCATATTTTTAAGTGATTGTTTACAAACAT
GAAAGTAGCTTAAAAATTGATTCTAAATTTCTTATTTCCCACTTTCTTTA
CTTATTTTTGGACGCCAATATAAGATGTCAAACTTGCTGTTCCAACTGTT
TTTAGGTTGTCCCTCACTTTTCTATCGATATCAGATAAATACTTGACTGC
CTTGCAATGCTGGTTTATGTTTCTTTTGTTCCAAATGGAAAATAATAAGT
ATATTAATATCACAATGATGATTATTTTCTAGTGGCACAAGAGATATTTT
CGACTATGTTCTGACAAAACACTGGAATACTACAAAGAAAAGAAAGAAAA
GAAGCCTTTAAAAGAACCTATCGATTTGAGAAATTGTCAAAATGTTGTAC
CTGACCCAAATGAAGAAGAATTCAAAATCAGTGGTGTAAAGTTTGGTGAG
AAATGGCGTTGGTTCTTCAAACTTGAGACACCTGAACGAACTTATCATTT
CATCGCTTCCACTAAAAGTGACATGAATCAATGGATCGAGAAAATTAACA
TGTTGAATCAAAATCAATTTACAGGTATCCTTAAATTATGGATTTCATGG
ACTTCTAACTAAATACACCCTTCCCTTATTCACTATTTGTCATATTCTTG
CCTCAAATAAAACTTTTTTATAAAACTTTTTTTCTTAAAATTTAGATTCA
GATGGAATAGAGCTACCTAACCGATCAAACTCATTATCAAGTGCTGTATC
CACAACAAGTAGTAGTTCTAATATGTCCTCTCCCGTTATGGTCAGGACCA
GTCCAAGTTCTCGGAGACCATCAAACCAATCTGCATCAAGATCAAGAGCT
AGTTCAGCTCATTCTCAAGAACATTATCGAGTACCAGGAATATCCAATAG
ATTCAATACTACACCAGCATCTGAAATGTTCGCAAAGGTAACTGTTGAAT
TGCCTCGCACATTGATTTCCCATGCGCCAATCCAATCAGATGTTGGTACC
ACCCCGGATGGATATGATATTTTAGATGTGGTCAATCAAACTGATCATGA
AGATATTTATAAAGTTCCTATCAATAATACACCCTCCTCATCTTACTCCA
TACCACCCAATCGACCAGTACCTATTCCCAAACAATCAACCTCCAAACCG
CCGCCACCACTTCCAAACCCAGCAACTAAACAAGCTCCAACACGAACACC
TGATTTTGGAATGATAGGTTACGAAAAAATGGATCCCAAAAATGAAAAAC
AACAACAACAACAGCATCATCAAGATTCAGATTCTTATGAACTTTCTTAT
TATCCTATGAGACCAAAGGATGAACTGCCATCTAGAACACACACAGGACC
AAGTCCTGAAAAGAAATTCACAACAATGCCATGGATGCTAAGAGATACAA
ATTCACAAAAATCTTCCTCTCTTCCACGCCATCATGTTGCGACACCGGAT
GTCCCACCAAAAAGAGAAGATCCATCCTTCTCTGAAATACCAAGTGTTAC
ACCTAAATCCCCTAATGATAGTGAAGGTATCAAATCTTGGGATCTAACAG
CTGATAGTACTTTATCTTCCCTAGATTACTTATGGAAAGCTATAATTCTC
CTTTTTTCCCAAGTTAACTATTCAAGCTTTAAAGAAATCCATCATTTTCC
CTACAATCCATTATAACTTAATATATTTCTTTCATTTCTTAAACTGGAAT
TGCTAGTCCTTCAGTAATCAATACTTTAGATTCTATTCTACTCTCTATTT
TTGAAGTAAAATAATCCCTTTAAGAATTCTAAACGTTCTTTGTTTGTCAT
TACAGACCCACCTCCTGTGCAGCGAGAAACAAAGCCTAATTTGCCACCGC
GTGTTGACCGTGCAAAGAAGCCGTCCTCTTCTACTTTACCACCACACTGG
CGTCTGCAAGGGGAAGATAGTTTTGATGGTATGCCTAAACCAAGTTATTA
TAATATTTATGACGATGATAATACAAACTCTGAGCCATTACTTGGCTATA
ACGAACTACCAAATCTGTCATCACGTCCTGATCCTTACCAACAACACCAA
TTAACTAACAACAGCACGACTGCACTTAACGATACAACTGTAACTCTTGA
CTCAGATGGTAATAAACTAACTGTTGATAAAATTGCACATATCAATATAA
AAATCGCACCAGATAATACACGACCAGTACCACCTACACCAGAACAAAAC
ACTACATATGAGAATTCATCTTCTCCAGCACGTAAAGTCTCCTCTGCATC
AAACTCATCAAAAGTCTCATATGAGAATGATGATGCTTTTGATGGGATCA
GTTATGAAAATTTTAAGGACAGGGTAAGCATGAAATGAATGTTTTAGGAT
GTTGAGTATGTCAGTGTGTCTTTATTCTTTGATTTCACTGATGATTGGTG
CCTGAGGACTATGAAACTCTGAGTTTGAAACATAGATATTGTGTCAACTC
TTTATTATATATTCATCCGTTCAAAATATGCACCACCGCTGCAATGTCTT
CTGACATTTCGTTACTATTAAGAAAGCTGCAAGTGGTGTATTGACTAGAA
ACAACAGAATAGTTTCCAGAGGGCATTACAATGGTGCATATTTTGAATCC
TACAGGATGAGACGACTGGGTCCAACCATCAGATTATCAGTGATAAAAAC
CTACAACTGTAGGCTAGGCTTTGAATGTATTATGAAATACTCCATATGAA
ATGCAAGGCTCGTATCATTGCTATTTTCATAGATTGTTATCAATCGCATG
TTTTTGTAAGAAGCTTAAAACTAATCTTTGTAGTCTTTATTTTTTGTAGT
AAAACCTGGTAAAACAATGAATCATTACCCATTCTCCATAGAAGTTATAG
TGGTCGAAAGTTTGATGATTATTTCTTGAATTGTTTGGTTATAGCCGAAG
CGACCTTTGCTGTACTCTCCAGTTGAAGGCAATCGATACAACTCTCAATC
TTCTGAAGAAGCCAGAGAAAGAGAGGTGGAGATCGAAGAATCCGAACCTG
GTAGTGGTCACTACCTTATTGTTGATGTCACAGCCACCAAAGCTGTTGAA
GGCGGTTTGGTTAACCGGGAAAGTCCTATAAATTGTGCCAGATGAGAGTA
AAATGAAATTTGTTTTGAATTTAAGTTACAGTTTTATTGGAAAAGGCTTT
TATTTAACATACCTTGATGAAGTGTCGATCATTTCAACAACAGACCTTTT
GGCCTTTTTGTTCATATGTATTTTTACCTTATAATAATGCATACTACAGT
ATTAAAAAATGATGTACTATAATTCTAAAAACATTTTTTACCAATGATTT
ACTTTGTTTTGTAATTTTATACCTTTTTTACTGAATTCTATAATTTATTT
TTGTGTAATGATTCATTTNAAAACATTTTTTACCAATGATTTACTTTGTT
TTGTAATTTTATACCTTTTTTACTGAATTCTATAATTTATTTTTGTGTAA
TGATTCATTTTAATATAATCACTTTTCTATCAAACTTATTTTTGAGGATT
TATCTCTATTTTTGTAGTGATTTTTTATGGAATATAATCAAATTTATTTC
GTATTGTTTTGTATTTTTATTGAAGTATTTTCAGTGTCTAAAACAAAACT
AGAGTACCTCGATCGTGTCTCATGATAAGTTAGTTAAATTGAACCCTAAG
GAAGGACCAGAAAAGACAGACCTGGTATGGGTCCAAGTTTTAATAACTTT
ATATCCGTTTTCACATTATTTTTAGAAATTTTCTATAAAAATATCTTGTA
CATAGCTAACGTATTTTTTGTTCCTGTCAAAATATTATTATTGCAAATTT
AACAAATTGCGGGAAAAACTCAAA

Coding sequence (CDS) from alignment at sc0000080:709668..713741-

>TCONS_00007963 ID=TCONS_00007963|Name=TCONS_00007963|organism=Clytia hemisphaerica|type=CDS|length=9690bp|location=Sequence derived from alignment at sc0000080:709668..713741- (Clytia hemisphaerica)
CCGAAGCGACCTTTGCTGTACTCTCCAGTTGAAGGCAATCGATACAACTC
TCAATCTTCTGAAGAAGCCAGAGAAAGAGAGGTGGAGATCGAAGAATCCG
AACCTGGTAGTGGTCACTACCTTATTGTTGATGTCACAGCCACCAAAGCT
GTTGAAGGCGGTTTGGTTAACCGGGAAAGTCCTATAAATTGTGCCAGATG
AACCCACCTCCTGTGCAGCGAGAAACAAAGCCTAATTTGCCACCGCGTGT
TGACCGTGCAAAGAAGCCGTCCTCTTCTACTTTACCACCACACTGGCGTC
TGCAAGGGGAAGATAGTTTTGATGGTATGCCTAAACCAAGTTATTATAAT
ATTTATGACGATGATAATACAAACTCTGAGCCATTACTTGGCTATAACGA
ACTACCAAATCTGTCATCACGTCCTGATCCTTACCAACAACACCAATTAA
CTAACAACAGCACGACTGCACTTAACGATACAACTGTAACTCTTGACTCA
GATGGTAATAAACTAACTGTTGATAAAATTGCACATATCAATATAAAAAT
CGCACCAGATAATACACGACCAGTACCACCTACACCAGAACAAAACACTA
CATATGAGAATTCATCTTCTCCAGCACGTAAAGTCTCCTCTGCATCAAAC
TCATCAAAAGTCTCATATGAGAATGATGATGCTTTTGATGGGATCAGTTA
TGAAAATTTTAAGGACAGGATTCAGATGGAATAGAGCTACCTAACCGATC
AAACTCATTATCAAGTGCTGTATCCACAACAAGTAGTAGTTCTAATATGT
CCTCTCCCGTTATGGTCAGGACCAGTCCAAGTTCTCGGAGACCATCAAAC
CAATCTGCATCAAGATCAAGAGCTAGTTCAGCTCATTCTCAAGAACATTA
TCGAGTACCAGGAATATCCAATAGATTCAATACTACACCAGCATCTGAAA
TGTTCGCAAAGGTAACTGTTGAATTGCCTCGCACATTGATTTCCCATGCG
CCAATCCAATCAGATGTTGGTACCACCCCGGATGGATATGATATTTTAGA
TGTGGTCAATCAAACTGATCATGAAGATATTTATAAAGTTCCTATCAATA
ATACACCCTCCTCATCTTACTCCATACCACCCAATCGACCAGTACCTATT
CCCAAACAATCAACCTCCAAACCGCCGCCACCACTTCCAAACCCAGCAAC
TAAACAAGCTCCAACACGAACACCTGATTTTGGAATGATAGGTTACGAAA
AAATGGATCCCAAAAATGAAAAACAACAACAACAACAGCATCATCAAGAT
TCAGATTCTTATGAACTTTCTTATTATCCTATGAGACCAAAGGATGAACT
GCCATCTAGAACACACACAGGACCAAGTCCTGAAAAGAAATTCACAACAA
TGCCATGGATGCTAAGAGATACAAATTCACAAAAATCTTCCTCTCTTCCA
CGCCATCATGTTGCGACACCGGATGTCCCACCAAAAAGAGAAGATCCATC
CTTCTCTGAAATACCAAGTGTTACACCTAAATCCCCTAATGATAGTGAAG
TGGCACAAGAGATATTTTCGACTATGTTCTGACAAAACACTGGAATACTA
CAAAGAAAAGAAAGAAAAGAAGCCTTTAAAAGAACCTATCGATTTGAGAA
ATTGTCAAAATGTTGTACCTGACCCAAATGAAGAAGAATTCAAAATCAGT
GGTGTAAAGTTTGGTGAGAAATGGCGTTGGTTCTTCAAACTTGAGACACC
TGAACGAACTTATCATTTCATCGCTTCCACTAAAAGTGACATGAATCAAT
GGATCGAGAAAATTAACATGTTGAATCAAAATCAATTTACAGATGAATGA
CAATTTCACCATGGAGACTAGAAAGGTTATACATGAAGGATTCTTGAAGA
AGTCTCCACCTCAAGCAAAAATTGAAAAAGGCTTCAAGCCGAAGCGACCT
TTGCTGTACTCTCCAGTTGAAGGCAATCGATACAACTCTCAATCTTCTGA
AGAAGCCAGAGAAAGAGAGGTGGAGATCGAAGAATCCGAACCTGGTAGTG
GTCACTACCTTATTGTTGATGTCACAGCCACCAAAGCTGTTGAAGGCGGT
TTGGTTAACCGGGAAAGTCCTATAAATTGTGCCAGATGAACCCACCTCCT
GTGCAGCGAGAAACAAAGCCTAATTTGCCACCGCGTGTTGACCGTGCAAA
GAAGCCGTCCTCTTCTACTTTACCACCACACTGGCGTCTGCAAGGGGAAG
ATAGTTTTGATGGTATGCCTAAACCAAGTTATTATAATATTTATGACGAT
GATAATACAAACTCTGAGCCATTACTTGGCTATAACGAACTACCAAATCT
GTCATCACGTCCTGATCCTTACCAACAACACCAATTAACTAACAACAGCA
CGACTGCACTTAACGATACAACTGTAACTCTTGACTCAGATGGTAATAAA
CTAACTGTTGATAAAATTGCACATATCAATATAAAAATCGCACCAGATAA
TACACGACCAGTACCACCTACACCAGAACAAAACACTACATATGAGAATT
CATCTTCTCCAGCACGTAAAGTCTCCTCTGCATCAAACTCATCAAAAGTC
TCATATGAGAATGATGATGCTTTTGATGGGATCAGTTATGAAAATTTTAA
GGACAGGATTCAGATGGAATAGAGCTACCTAACCGATCAAACTCATTATC
AAGTGCTGTATCCACAACAAGTAGTAGTTCTAATATGTCCTCTCCCGTTA
TGGTCAGGACCAGTCCAAGTTCTCGGAGACCATCAAACCAATCTGCATCA
AGATCAAGAGCTAGTTCAGCTCATTCTCAAGAACATTATCGAGTACCAGG
AATATCCAATAGATTCAATACTACACCAGCATCTGAAATGTTCGCAAAGG
TAACTGTTGAATTGCCTCGCACATTGATTTCCCATGCGCCAATCCAATCA
GATGTTGGTACCACCCCGGATGGATATGATATTTTAGATGTGGTCAATCA
AACTGATCATGAAGATATTTATAAAGTTCCTATCAATAATACACCCTCCT
CATCTTACTCCATACCACCCAATCGACCAGTACCTATTCCCAAACAATCA
ACCTCCAAACCGCCGCCACCACTTCCAAACCCAGCAACTAAACAAGCTCC
AACACGAACACCTGATTTTGGAATGATAGGTTACGAAAAAATGGATCCCA
AAAATGAAAAACAACAACAACAACAGCATCATCAAGATTCAGATTCTTAT
GAACTTTCTTATTATCCTATGAGACCAAAGGATGAACTGCCATCTAGAAC
ACACACAGGACCAAGTCCTGAAAAGAAATTCACAACAATGCCATGGATGC
TAAGAGATACAAATTCACAAAAATCTTCCTCTCTTCCACGCCATCATGTT
GCGACACCGGATGTCCCACCAAAAAGAGAAGATCCATCCTTCTCTGAAAT
ACCAAGTGTTACACCTAAATCCCCTAATGATAGTGAAGTGGCACAAGAGA
TATTTTCGACTATGTTCTGACAAAACACTGGAATACTACAAAGAAAAGAA
AGAAAAGAAGCCTTTAAAAGAACCTATCGATTTGAGAAATTGTCAAAATG
TTGTACCTGACCCAAATGAAGAAGAATTCAAAATCAGTGGTGTAAAGTTT
GGTGAGAAATGGCGTTGGTTCTTCAAACTTGAGACACCTGAACGAACTTA
TCATTTCATCGCTTCCACTAAAAGTGACATGAATCAATGGATCGAGAAAA
TTAACATGTTGAATCAAAATCAATTTACAGATGAATGACAATTTCACCAT
GGAGACTAGAAAGGTTATACATGAAGGATTCTTGAAGAAGTCTCCACCTC
AAGCAAAAATTGAAAAAGGCTTCAAGCCGAAGCGACCTTTGCTGTACTCT
CCAGTTGAAGGCAATCGATACAACTCTCAATCTTCTGAAGAAGCCAGAGA
AAGAGAGGTGGAGATCGAAGAATCCGAACCTGGTAGTGGTCACTACCTTA
TTGTTGATGTCACAGCCACCAAAGCTGTTGAAGGCGGTTTGGTTAACCGG
GAAAGTCCTATAAATTGTGCCAGATGAACCCACCTCCTGTGCAGCGAGAA
ACAAAGCCTAATTTGCCACCGCGTGTTGACCGTGCAAAGAAGCCGTCCTC
TTCTACTTTACCACCACACTGGCGTCTGCAAGGGGAAGATAGTTTTGATG
GTATGCCTAAACCAAGTTATTATAATATTTATGACGATGATAATACAAAC
TCTGAGCCATTACTTGGCTATAACGAACTACCAAATCTGTCATCACGTCC
TGATCCTTACCAACAACACCAATTAACTAACAACAGCACGACTGCACTTA
ACGATACAACTGTAACTCTTGACTCAGATGGTAATAAACTAACTGTTGAT
AAAATTGCACATATCAATATAAAAATCGCACCAGATAATACACGACCAGT
ACCACCTACACCAGAACAAAACACTACATATGAGAATTCATCTTCTCCAG
CACGTAAAGTCTCCTCTGCATCAAACTCATCAAAAGTCTCATATGAGAAT
GATGATGCTTTTGATGGGATCAGTTATGAAAATTTTAAGGACAGGATTCA
GATGGAATAGAGCTACCTAACCGATCAAACTCATTATCAAGTGCTGTATC
CACAACAAGTAGTAGTTCTAATATGTCCTCTCCCGTTATGGTCAGGACCA
GTCCAAGTTCTCGGAGACCATCAAACCAATCTGCATCAAGATCAAGAGCT
AGTTCAGCTCATTCTCAAGAACATTATCGAGTACCAGGAATATCCAATAG
ATTCAATACTACACCAGCATCTGAAATGTTCGCAAAGGTAACTGTTGAAT
TGCCTCGCACATTGATTTCCCATGCGCCAATCCAATCAGATGTTGGTACC
ACCCCGGATGGATATGATATTTTAGATGTGGTCAATCAAACTGATCATGA
AGATATTTATAAAGTTCCTATCAATAATACACCCTCCTCATCTTACTCCA
TACCACCCAATCGACCAGTACCTATTCCCAAACAATCAACCTCCAAACCG
CCGCCACCACTTCCAAACCCAGCAACTAAACAAGCTCCAACACGAACACC
TGATTTTGGAATGATAGGTTACGAAAAAATGGATCCCAAAAATGAAAAAC
AACAACAACAACAGCATCATCAAGATTCAGATTCTTATGAACTTTCTTAT
TATCCTATGAGACCAAAGGATGAACTGCCATCTAGAACACACACAGGACC
AAGTCCTGAAAAGAAATTCACAACAATGCCATGGATGCTAAGAGATACAA
ATTCACAAAAATCTTCCTCTCTTCCACGCCATCATGTTGCGACACCGGAT
GTCCCACCAAAAAGAGAAGATCCATCCTTCTCTGAAATACCAAGTGTTAC
ACCTAAATCCCCTAATGATAGTGAAGTGGCACAAGAGATATTTTCGACTA
TGTTCTGACAAAACACTGGAATACTACAAAGAAAAGAAAGAAAAGAAGCC
TTTAAAAGAACCTATCGATTTGAGAAATTGTCAAAATGTTGTACCTGACC
CAAATGAAGAAGAATTCAAAATCAGTGGTGTAAAGTTTGGTGAGAAATGG
CGTTGGTTCTTCAAACTTGAGACACCTGAACGAACTTATCATTTCATCGC
TTCCACTAAAAGTGACATGAATCAATGGATCGAGAAAATTAACATGTTGA
ATCAAAATCAATTTACAGATGAATGACAATTTCACCATGGAGACTAGAAA
GGTTATACATGAAGGATTCTTGAAGAAGTCTCCACCTCAAGCAAAAATTG
AAAAAGGCTTCAAGCCGAAGCGACCTTTGCTGTACTCTCCAGTTGAAGGC
AATCGATACAACTCTCAATCTTCTGAAGAAGCCAGAGAAAGAGAGGTGGA
GATCGAAGAATCCGAACCTGGTAGTGGTCACTACCTTATTGTTGATGTCA
CAGCCACCAAAGCTGTTGAAGGCGGTTTGGTTAACCGGGAAAGTCCTATA
AATTGTGCCAGATGAACCCACCTCCTGTGCAGCGAGAAACAAAGCCTAAT
TTGCCACCGCGTGTTGACCGTGCAAAGAAGCCGTCCTCTTCTACTTTACC
ACCACACTGGCGTCTGCAAGGGGAAGATAGTTTTGATGGTATGCCTAAAC
CAAGTTATTATAATATTTATGACGATGATAATACAAACTCTGAGCCATTA
CTTGGCTATAACGAACTACCAAATCTGTCATCACGTCCTGATCCTTACCA
ACAACACCAATTAACTAACAACAGCACGACTGCACTTAACGATACAACTG
TAACTCTTGACTCAGATGGTAATAAACTAACTGTTGATAAAATTGCACAT
ATCAATATAAAAATCGCACCAGATAATACACGACCAGTACCACCTACACC
AGAACAAAACACTACATATGAGAATTCATCTTCTCCAGCACGTAAAGTCT
CCTCTGCATCAAACTCATCAAAAGTCTCATATGAGAATGATGATGCTTTT
GATGGGATCAGTTATGAAAATTTTAAGGACAGGATTCAGATGGAATAGAG
CTACCTAACCGATCAAACTCATTATCAAGTGCTGTATCCACAACAAGTAG
TAGTTCTAATATGTCCTCTCCCGTTATGGTCAGGACCAGTCCAAGTTCTC
GGAGACCATCAAACCAATCTGCATCAAGATCAAGAGCTAGTTCAGCTCAT
TCTCAAGAACATTATCGAGTACCAGGAATATCCAATAGATTCAATACTAC
ACCAGCATCTGAAATGTTCGCAAAGGTAACTGTTGAATTGCCTCGCACAT
TGATTTCCCATGCGCCAATCCAATCAGATGTTGGTACCACCCCGGATGGA
TATGATATTTTAGATGTGGTCAATCAAACTGATCATGAAGATATTTATAA
AGTTCCTATCAATAATACACCCTCCTCATCTTACTCCATACCACCCAATC
GACCAGTACCTATTCCCAAACAATCAACCTCCAAACCGCCGCCACCACTT
CCAAACCCAGCAACTAAACAAGCTCCAACACGAACACCTGATTTTGGAAT
GATAGGTTACGAAAAAATGGATCCCAAAAATGAAAAACAACAACAACAAC
AGCATCATCAAGATTCAGATTCTTATGAACTTTCTTATTATCCTATGAGA
CCAAAGGATGAACTGCCATCTAGAACACACACAGGACCAAGTCCTGAAAA
GAAATTCACAACAATGCCATGGATGCTAAGAGATACAAATTCACAAAAAT
CTTCCTCTCTTCCACGCCATCATGTTGCGACACCGGATGTCCCACCAAAA
AGAGAAGATCCATCCTTCTCTGAAATACCAAGTGTTACACCTAAATCCCC
TAATGATAGTGAAGTGGCACAAGAGATATTTTCGACTATGTTCTGACAAA
ACACTGGAATACTACAAAGAAAAGAAAGAAAAGAAGCCTTTAAAAGAACC
TATCGATTTGAGAAATTGTCAAAATGTTGTACCTGACCCAAATGAAGAAG
AATTCAAAATCAGTGGTGTAAAGTTTGGTGAGAAATGGCGTTGGTTCTTC
AAACTTGAGACACCTGAACGAACTTATCATTTCATCGCTTCCACTAAAAG
TGACATGAATCAATGGATCGAGAAAATTAACATGTTGAATCAAAATCAAT
TTACAGATGAATGACAATTTCACCATGGAGACTAGAAAGGTTATACATGA
AGGATTCTTGAAGAAGTCTCCACCTCAAGCAAAAATTGAAAAAGGCTTCA
AGCCGAAGCGACCTTTGCTGTACTCTCCAGTTGAAGGCAATCGATACAAC
TCTCAATCTTCTGAAGAAGCCAGAGAAAGAGAGGTGGAGATCGAAGAATC
CGAACCTGGTAGTGGTCACTACCTTATTGTTGATGTCACAGCCACCAAAG
CTGTTGAAGGCGGTTTGGTTAACCGGGAAAGTCCTATAAATTGTGCCAGA
TGAACCCACCTCCTGTGCAGCGAGAAACAAAGCCTAATTTGCCACCGCGT
GTTGACCGTGCAAAGAAGCCGTCCTCTTCTACTTTACCACCACACTGGCG
TCTGCAAGGGGAAGATAGTTTTGATGGTATGCCTAAACCAAGTTATTATA
ATATTTATGACGATGATAATACAAACTCTGAGCCATTACTTGGCTATAAC
GAACTACCAAATCTGTCATCACGTCCTGATCCTTACCAACAACACCAATT
AACTAACAACAGCACGACTGCACTTAACGATACAACTGTAACTCTTGACT
CAGATGGTAATAAACTAACTGTTGATAAAATTGCACATATCAATATAAAA
ATCGCACCAGATAATACACGACCAGTACCACCTACACCAGAACAAAACAC
TACATATGAGAATTCATCTTCTCCAGCACGTAAAGTCTCCTCTGCATCAA
ACTCATCAAAAGTCTCATATGAGAATGATGATGCTTTTGATGGGATCAGT
TATGAAAATTTTAAGGACAGGATTCAGATGGAATAGAGCTACCTAACCGA
TCAAACTCATTATCAAGTGCTGTATCCACAACAAGTAGTAGTTCTAATAT
GTCCTCTCCCGTTATGGTCAGGACCAGTCCAAGTTCTCGGAGACCATCAA
ACCAATCTGCATCAAGATCAAGAGCTAGTTCAGCTCATTCTCAAGAACAT
TATCGAGTACCAGGAATATCCAATAGATTCAATACTACACCAGCATCTGA
AATGTTCGCAAAGGTAACTGTTGAATTGCCTCGCACATTGATTTCCCATG
CGCCAATCCAATCAGATGTTGGTACCACCCCGGATGGATATGATATTTTA
GATGTGGTCAATCAAACTGATCATGAAGATATTTATAAAGTTCCTATCAA
TAATACACCCTCCTCATCTTACTCCATACCACCCAATCGACCAGTACCTA
TTCCCAAACAATCAACCTCCAAACCGCCGCCACCACTTCCAAACCCAGCA
ACTAAACAAGCTCCAACACGAACACCTGATTTTGGAATGATAGGTTACGA
AAAAATGGATCCCAAAAATGAAAAACAACAACAACAACAGCATCATCAAG
ATTCAGATTCTTATGAACTTTCTTATTATCCTATGAGACCAAAGGATGAA
CTGCCATCTAGAACACACACAGGACCAAGTCCTGAAAAGAAATTCACAAC
AATGCCATGGATGCTAAGAGATACAAATTCACAAAAATCTTCCTCTCTTC
CACGCCATCATGTTGCGACACCGGATGTCCCACCAAAAAGAGAAGATCCA
TCCTTCTCTGAAATACCAAGTGTTACACCTAAATCCCCTAATGATAGTGA
AGTGGCACAAGAGATATTTTCGACTATGTTCTGACAAAACACTGGAATAC
TACAAAGAAAAGAAAGAAAAGAAGCCTTTAAAAGAACCTATCGATTTGAG
AAATTGTCAAAATGTTGTACCTGACCCAAATGAAGAAGAATTCAAAATCA
GTGGTGTAAAGTTTGGTGAGAAATGGCGTTGGTTCTTCAAACTTGAGACA
CCTGAACGAACTTATCATTTCATCGCTTCCACTAAAAGTGACATGAATCA
ATGGATCGAGAAAATTAACATGTTGAATCAAAATCAATTTACAGATGAAT
GACAATTTCACCATGGAGACTAGAAAGGTTATACATGAAGGATTCTTGAA
GAAGTCTCCACCTCAAGCAAAAATTGAAAAAGGCTTCAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004483	XLOC_004483	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00007963-protein	TCONS_00007963-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000080	supercontig	sc0000080:709668..713741 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.882158	1.21251	0.470593	1.03458	20.7857	15.2115	17.9028	18.3182	10.5414	14.0239	10.2102	8.24916	8.74382	5.12862	7.55446	7.77612	13.6063	11.9682	8.88503	7.71756	6.87981	9.29955	16.4911	13.6835	8.86072	9.16048	9.99465	7.73546	17.0669	16.625

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001849	PH_domain
IPR011993	PH_dom-like

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00007963 vs. Swiss-Prot (Human)

BLAST of TCONS_00007963 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00007963 (transcript) - C. hemisphaerica