TCONS_00007941 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007941
Unique NameTCONS_00007941
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3776

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007941 ID=TCONS_00007941|Name=TCONS_00007941|organism=Clytia hemisphaerica|type=transcript|length=3776bp
CGCGTATATGTTGTACTACATGATATCCATCATAAACTTTTTGTGCCATC
CATGAAAAAGATTCATAAAGAGTTTTAGTGAACGTCACTCCCTCTCTCTT
TATTTGTTTACCTGATGCTTTCTCGACGTGGAGCTCTCGTAAGTGTTTTA
AGTACTTAATCTCATCCCAAGTCATTCTCTTACACATCTTGCGTACAGAA
AAAGGTATATCATGTCGTATGTGAATCGTTTTTGTTTCGGCTGAATCGGG
TGTATCGTATGAATTTTCCCTCTTATCATATTNGTTTTTGTTTCGGCTGA
ATCGGGTGAATCGAATGAATTTTCCCTTTTATCATATCGAATACACATAT
TTCTCATAAAAGTATTTTTCGCTTTCAACATTTCGACTTCATGCCAGAAA
TCTTGATCTATATTTTTCAGAATGTTCCAAAATGTTTTATTGAAATGATT
ATATAAAATAACATCAGCCTGACTCCATTTAGTGATTTTCTTTTGTAGAG
GTTTTGAGATATGTCTCCGCCACGATTCCGCTCGATTCTTTAATCGAAAG
TAAACAAAGTCATCTAATTCCCAACACAATAAACGTTTTAAGAGAACAAT
AGATTCATCAAAATATTCCATCATCATCACCAAATGAAATTGATGATCCA
ACTCCTCCAGCTTCTTATAAATCtctttattgtttttaaaatctttcgaT
TCTAACCCTAAATCATAAAACATTCCATTTTGGATCAATTTCAATCGATC
ACTATTGATCCTCAAATCTTGAGTCAGAACATAATTGACTAAAACTTTTT
CAGGGTCTTTAAAAAACTCTGTTAAAGTGTCTTCACTTTTCTTCATTCCC
AAAATCTTATCAAAAGTCATGTACGAGAAGCTAGATTCGAACTGGCTGAT
GGGATTACGTAATATAGTGACGTAAACAGTATCATTGGGCATCAAATCAG
TCATAGGTTGTTTATTGAATCTAGCATGATTACATAATATGTTTGGTTCT
GTTCCGTTTAGAGGATAAAATGAAGTGTTCTTAAAAAACCAAGGCCAGTC
CAATCGATTGGATCCGATGCTAGAGACAGCGCACCATTCTCGATGAAGTG
CCAACATGACCAATATCGAATGACGAGAGGTACCAGAATGCAGTTCAAAG
TCAACAGATAACATATGAGCCGAAATCTCGATGCTTTATGTCTCATTTTG
ACCACGAGTAGGAAACCCTTTGAACTCAATATTTTCACCTTTGCCGGGAA
TGATTCGTTGATAGATATCCCACGGCTTTCAACAACTCCGTGAAGAAACC
TGATATCGAAAAAAAGGCTAATATTTTCCAACCGACTAGCCTCAACTCCT
TACTACACACCAGTCATTTGAAGATTTCAGGTGATGTCAATTATTCGACG
ATAGGTGATGACATGCACCCAGCATCCGGTGTTTTGCACTCCTTGGCAGG
TGCGAAGAACGAAAGTGGAAAAAGTTTTGAGAACACACTTGATTATCTTT
CATCGACCACCGACCAACTGGTTGAAATCCTACACAATTTTGAAGTTGGT
ATGCGCATTGCGGTCCTCACAAATCTCCCAAGAGACACAGATACGAAAGA
CGTTACAAAATTGGTCAGTAAAATAGACAGTAACGGAATGCGAGCGGTTC
ATTTGAATCTCGAAGATGTCAAGGACGTGTCTAGTATATGGTATACCATC
AATCGATCAGTCGAATTGAAACTGACCACCTTTGTGTTGTTAATGCCTCC
ATTTTGCTCAATGTTGGTCATAGACGTGGCTTTGAGTAAACATTTGACTG
ATAAAGATCAGAGCTGGATAGCAGTCAACTTGAACAAGAAAAATAAGGTT
GCATTAATGAGAGAAAGATTTCATGTCAATAATCTGCTGATTAGAAAACA
GCCGAGGAATCACACGCGCTCACTCGATCGGAGTCAACAGAACAGAGATG
ATAGCGGTAGCTTACAGACGGATCCAGTGTACACCATTGAGCCTCCAAAA
TGGcgcaaaacaaagaaatcatcAGATGTTAAACATTTCCTTCGATTTGC
CACCATCTTTTACCACCCACTAGTTTTCCCTCTTCTACATATTCCGAACG
AAGCTGGCAGTTGTGAAGTAGGTATGCCATGCCGATTTCCGAAGAAAATc
tccggactgtccggtgttcGGTGGATTCCGGCATGTTGTTCCGGATTGAT
TTTGGATATTTTGCAGAACGTGATTAAAGATATGAACGTTGTGTTCGATT
TGTACGTCGTTGAAGACCAAACGTTCGGTGGTTTTCATAATGGATCGTGG
ACGGGGATCGTTCAAGACGTTTATACGGGAAAAGCGGACGTTGGAGTTCA
CGCAATGACGCAATTACACCAACGTTTGGACTACGTAGATTACACTGAAC
CTATTCTTGGTTCATGGTTAGGTATCGTTCGGCGCCGTGAAAAACCGTCG
CTACCCGTCATCaattggatattcttaaccAAACTTCATGTTAACTTGAT
CATTGCTATTCTAGTCGTGTTTGTTATCAACTTTGTGTTTGCTCTCGTTT
GCGAAAACACCATGGCCAAGTATTTACGACTCAAACGTTTCCACACGAGA
GACATGTTTTCTTATATCTCTGGACTACTTTTTCAAAGAGACCTGGGTGC
TAAGTTACCAGAATTCTGGTCCAGTCGACTACCCTGTATTTGTTACGCTA
TTGCCATGACGATCATCATGTCAACATACACTGCTAATCTTACGGCGACG
AATATTGTTTACGACGATAGCGATGATTTTCAAGGACTGTCTGATCCTAA
GCTGACCAATCCGAGCAGCGAGTTTAAGATCACAGTGATGGGACAAACAG
CATATGAGTTGTGGGCGCGAACTAAACCTCTTCTTTATGAACACATGAAA
GACGCGATGGTACCCAATGATTACGTCGGTGTCAAGAACGTCCTATCAGG
ATCATTGGATGGTTATATTGGAGATTACAAATTCTTGAAATATCTCTCAC
AACTCCCACAATTCTGCCATAAACTAAGACTTTACAAAGAGAAACGGAAA
TCCATATTCAGTGCTTTCATTGTACCGAAGAACTCGCCCTGGAAAGAGCC
ATTCTCGCAGGAAATCCTGAACACTTTTGAGACGGGCAAAATGGCGGAAC
TGCTAGATCGTTGGTTGTGGTACACAGCTTGTGAACAAACGGAGAACGAC
GTCAGTTCTTTCACGTGGCGATATTTCGGTGGACTTTTCGTCTTTACCGG
AGCTTCTATTGGATTTGTCACTTTGGTTTTGTGTCTGGAATTTCTGGTGA
ATTGTATTCGTAACGTGTCATGAACATTGTGTGTTCTTTATATCCATGAA
AACAACGTGTGTAGCTTGTGAGCCGTCTCTTCTACTTGTTGTTTCCCTGC
TTTTCTGGAAATGTAACTTTGGTGATAACATACTCATCAAGTATTGCGTG
TTAAAGACATATGCTAGGACATCGACATATATTGTTGAGATGCACATTGT
TGAgcaaatcaacaaaatttttacCATAGAGATTAAAGACATATGGTTGG
TAAACTGCCATCTTTCTCACTGGTATGTGAGCTGAATGAATGACTATAAA
AGAAATTTATGTATGAAGTCTTTATAACTGAGGGGACGATGATATTTAAT
ACTCATTTTTACTATACTACGATTTgtatttttagacatttttaaatttc
gttATTGTGAAAGTAAACTTTGTGTACCATGAAAATCGCAGATTATCGCA
ATTTCATTATGTAAGCATTTTGAGAG
Run BLAST on NCBI

transcript from alignment at sc0000080:643230..650525-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007941 ID=TCONS_00007941|Name=TCONS_00007941|organism=Clytia hemisphaerica|type=transcript|length=7296bp|location=Sequence derived from alignment at sc0000080:643230..650525- (Clytia hemisphaerica)
CGCGTATATGTTGTACTACATGATATCCATCATAAACTTTTTGTGCCATC
CATGAAAAAGATTCATAAAGAGTTTTAGTGAACGTCACTCCCTCTCTCTT
TATTTGTTTACCTGATGCTTTCTCGACGTGGAGCTCTCGTAAGTGTTTTA
AGTACTTAATCTCATCCCAAGTCATTCTCTTACACATCTTGCGTACAGAA
AAAGGTATATCATGTCGTATGTGAATCGTTTTTGTTTCGGCTGAATCGGG
TGTATCGTATGAATTTTCCCTCTTATCATATTNGTTTTTGTTTCGGCTGA
ATCGGGTGAATCGAATGAATTTTCCCTTTTATCATATCGAATACACATAT
TTCTCATAAAAGTATTTTTCGCTTTCAACATTTCGACTTCATGCCAGAAA
TCTTGATCTATATTTTTCAGAATGTTCCAAAATGTTTTATTGAAATGATT
ATATAAAATAACATCAGCCTGACTCCATTTAGTGATTTTCTTTTGTAGAG
GTTTTGAGATATGTCTCCGCCACGATTCCGCTCGATTCTTTAATCGAAAG
TAAACAAAGTCATCTAATTCCCAACACAATAAACGTTTTAAGAGAACAAT
AGATTCATCAAAATATTCCATCATCATCACCAAATGAAATTGATGATCCA
ACTCCTCCAGCTTCTTATAAATCTCTTTATTGTTTTTAAAATCTTTCGAT
TCTAACCCTAAATCATAAAACATTCCATTTTGGATCAATTTCAATCGATC
ACTATTGATCCTCAAATCTTGAGTCAGAACATAATTGACTAAAACTTTTT
CAGGGTCTTTAAAAAACTCTGTTAAAGTGTCTTCACTTTTCTTCATTCCC
AAAATCTTATCAAAAGTCATGTACGAGAAGCTAGATTCGAACTGGCTGAT
GGGATTACGTAATATAGTGACGTAAACAGTATCATTGGGCATCAAATCAG
TCATAGGTTGTTTATTGAATCTAGCATGATTACATAATATGTTTGGTTCT
GTTCCGTTTAGAGGATAAAATGAAGTGTTCTTAAAAAACCAAGGCCAGTC
CAATCGATTGGATCCGATGCTAGGTAAGACGAAGTTGAGATTCCTTGCTT
CACCATATCTGTTGAGGATATTGGTGATGGTTGAACTCCCTGTTTTGTGT
GTCTTCAGAAACACGATGTTCTTCTTACGTTTGCATGCTCTGTAGAAAGA
AAAGACAAATTTTTGTGTTGTAGATTACTTTTTCTAGCTCCCAACTGGGA
AAATTTGCCTTGGAGTTTGTCTCTGGTGAAAAATATCCTGCAGTTTCATC
TTGCTTGTTATGGTTAGGGGTTTGAATTTTATTGTTTAAAAATAGTTCTA
AAAAAGATTCAGTGAGGATGTCCGAATATTTTTAAACAATAAAATTCAAA
ACCCCTAACTAATTACAAGCAAAAGTTTTCCATTGGCATTTGATATACTT
TCACTTTATAACTAAAAACTTAGCAAGGGGTTTTGGAGTAATTACTTCAC
GGCTACCTTATGTTTCACAGTTTTCATTGTTCAATTCCTTATCTCGATCA
ACCCTACTAAACTAATAAGTGGCTTTGGGAAGGAGAACGAGAAATTTTTA
CTCTTATACTCAAAGAAATTTTTTAGTTTACTTACTTCCGATGATGTAAT
CTTTCAACATGTTTCCCACCCACTGGGATCTTCTGTAACATAAATTCTTT
TTGTTGCAGAGACAGCGCACCATTCTCGATGAAGTGCCAACATGACCAAT
ATCGAATGACGAGAGGTACCAGAATGCAGTTCAAAGTCAACAGATAACAT
ATGAGCCGAAATCTCGATGCTTTATGTCTCATTTTGACCACGAGTAGGAA
ACCCTTTGAACTCAATATTTTCACCTTTGCCGGGTTTGTATTCTTTCTCG
ATTCTTCAATCTAACTCTTTAGTTGAACTGTTTTCTATCTTTCTTTACAT
GCTGAACCTCGGTCAAACAATTTGAACAGTTCGTACACATCTTCAGTATA
AACAAAGATGGCGGCTATTTTAATGATGGTTTCAATTTTGCACGTTTTCA
GAAAATTATAGCCTTTTCAAAATTTATCAACACCAAAACAGATAATAGCT
TCCATTAATACGAAAAAAGGGACTGGGTGGACTTTCAAGAGAATAGGTCA
TTAGAATGAACATGGATTTGATATTTTTGAAAATAAATGATTTTCTCATC
TCATTTATTTCGCAACCACTTGAGATTTGTAATTCGTTTCGAATTTCTTC
AGGAATGATTCGTTGATAGATATCCCACGGCTTTCAACAACTCCGTGAAG
AAACCTGATATCGAAAAAAAGGTCGGTAAAAATCTTTTTGCTGGTTCATT
AGTGTTTATCCGTTAATAAAATTAAATAATACTATAAACAATGAAAAGGG
AGAAGGCAAAACAAAAGATGGAAAAAACCTTTTTGTTGTTCATTTTTGTA
AGGTCGATTTCTCTAGTGAAGTTCTACAGATAAATAAAAATGTTTTTCAT
GATCCAAAATATCCTACATCATGAATAATTGGTGGGTTGAGAAAACACAA
TATTCTTTCGAACTGAAAATATAACTTCAGATGAATGTATAATATTATTT
GACGGGTCTACAAGATGTACGCGTTTGTATTTATGTTTTTATACAGCCTA
GCCTGGTTTTGTGATGCTATTCTTCTACAACCTTCACAGGCTAATATTTT
CCAACCGACTAGCCTCAACTCCTTACTACACACCAGTCATTTGAAGATTT
CAGGTGATGTCAATTATTCGACGATAGGTGATGACATGCACCCAGCATCC
GGTGTTTTGCACTCCTTGGCAGGTGCGAAGAACGAAAGTGGAAAAAGTTT
TGAGGTAAACTTCTGATGTGTTTCTGACTTTAGGCCCTGTCACTATTTAA
AGAATATCACCACTTTTTTCCTCTTTTTTGCCTCTTTTTTGCCTCTTTTT
TGCCTCATAGGCCCCAATCCGTAAACACGGTTGAAAGATGGTTGTTCTTT
ATGTACTTTATACAAACTTTCGTGAGCAGAAACTTTTGCGATTTTCGCGA
AAGTAAATGTCTTTGGAAATTCTTAACAGGGCGATTCGCGAAAGTTTATG
CTCGAGAAAAATTCTCAAAAAGATTGGAAATCTATAAAACCTCAAAATTG
TAATAAATATCAAATTTTTGCCATATTTCTATCCTTTAATACCTTAGTCA
AAGAGCAACTGTCTTTATCGGATTTGAGTAATATTTTTCACTCTAAATGC
AATTTTATTTCGAAAAATCTCATTTTTATCAAACGATTCGCGAAAATTTA
TACTTGCGAAAAACATTTTCCCTCCAATTCGCGAAATTAAATGTCGTGAA
TTTCTCGCGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCTAAAGTAGCTT
GCCGAATTTTTTGTGTTTTGGAAATGTATATTTTGTATAAAGTTATACAG
TTTTCCCCAACTTTCCAGAACACACTTGATTATCTTTCATCGACCACCGA
CCAACTGGTTGAAATCCTACACAATTTTGAAGTTGGTATGCGCATTGCGG
TCCTCACAAATCTCCCAAGAGACACAGATACGAAAGACGTTACAAAATTG
GTCAGTAAAATAGACAGTAACGGAATGCGAGCGGTTCATTTGAATCTCGA
AGATGTCAAGGACGTGTCTAGTATATGGTATACCATCAATCGATCAGTCG
AATTGAAACTGACCACCTTTGTGTTGTTAATGCCTCCATTTTGCTCAATG
TTGGTCATAGACGTGGCTTTGAGTAAACATTTGACTGATAAAGATCAGAG
CTGGATAGCAGTCAACTTGAACAAGAAAAATAAGGTTGCATTAATGAGAG
AAAGATTTCATGTCAATAATCTGCTGATTAGAAAACAGCCGAGGAATCAC
ACGCGCTCACTCGATCGGAGTCAACAGAACAGGTTTGTAGTGAAATGATA
AACGTCTCTCTTTTTGTCCTAGTTTTTAATCAAGTTTATCATGAAAATTA
ACAAGTAACTGAAGATTACTATAGAATTTTAAATAGTTCTATATACGAAA
GTATTCCATTATCCTAACCCGCTTACATCATTTTCCTTTTTTATCTAGAG
ATGATAGCGGTAGCTTACAGACGGATCCAGTGTACACCATTGAGCCTCCA
AAATGGCGCAAAACAAAGAAATCATCAGATGTTAAACATTTCCTTCGATT
TGCCACCATCTTTTACCACCCACTAGTTTTCCCTCTTCTACATATTCCGA
ACGAAGCTGGCAGTTGTGAAGTAGGTATGCCATGCCGATTTCCGAAGAAA
ATCTCCGGACTGTCCGGTGTTCGGTGGATTCCGGCATGTTGTTCCGGATT
GATTTTGGATATTTTGCAGAACGTGATTAAAGATATGAACGTTGTGTTCG
ATTTGTACGTCGTTGAAGACCAAACGTTCGGTGGTTTTCATAATGGATCG
TGGACGGGGATCGTTCAAGACGTTTATACGGGAAAAGCGGACGTTGGAGT
TCACGCAATGACGCAATTACACCAACGTTTGGACTACGTAGATTACACTG
AACCTATTCTTGGTTCATGGTTAGGTATCGTTCGGCGCCGTGAAAAACCG
TCGCTACCCGTCATCAATTGGATATTCTTAACCAAACTTCATGTTAACTT
GATCATTGCTATTCTAGTCGTGTTTGTTATCAACTTTGTGTTTGCTCTCG
TTTGCGAAAACACCATGGCCAAGTATTTACGACTCAAACGTTTCCACACG
AGAGACATGTTTTCTTATATCTCTGGACTACTTTTTCAAAGAGACCTGGG
TGCTAAGTTACCAGAATTCTGGTCCAGTCGACTACCCTGTATTTGTTACG
CTATTGCCATGACGATCATCATGTCAACATACACTGCTAATCTTACGGCG
ACGAATATTGTTTACGACGATAGCGATGATTTTCAAGGACTGTCTGATCC
TAAGGTATAAATTGAGGTGTTTTTCAATCTTGTTTCTTGACGTTTAAATC
AACCTCTTAATTTGGGTTTTGAACTTACATTATTCGATAAATTTTTCCTG
NTCGGTGGTTTTCATAATGGATCGTGGACGGGGATCGTTCAAGACGTTTA
TACGGGAAAAGCGGACGTTGGAGTTCACGCAATGACGCAATTACACCAAC
GTTTGGACTACGTAGATTACACTGAACCTATTCTTGGTTCATGGTTAGGT
ATCGTTCGGCGCCGTGAAAAACCGTCGCTACCCGTCATCAATTGGATATT
CTTAACCAAACTTCATGTTAACTTGATCATTGCTATTCTAGTCGTGTTTG
TTATCAACTTTGTGTTTGCTCTCGTTTGCGAAAACACCATGGCCAAGTAT
TTACGACTCAAACGTTTCCACACGAGAGACATGTTTTCTTATATCTCTGG
ACTGCTTTTTCAAAGAGACCTGGGTGCTAAGTTACCAGAATTCTGGTCCA
GTCGGCTACCATGTATTTGTTACGCTATTGCCATGACGATCATCATGTCA
ACATACACTGCTAATCTTACGGCGACGAATATTGTTTACGACGATAGCGA
TGATTTTCAAGGACTGTCTGATCCTAAGGTATAAATTGAGGTGTTTTTCA
ATCTTGTTTCTTGACGTTTAAATCAACCTCTTAATTTGGGTTTTGAACTT
ACATTATTCGATAAATTTTTCCTGAAGGTTATAAGTTACTTTATAAAGAT
GAAGAACTTTTGTTTCAATAATATAACTGATAAACTCTATTTTTCCCGAG
ATCAACCGCTACTCTGTGCTTGCTTTTCCCACGTTCTTGCCGGGGATTAG
AAAGTTTAATCATCCTACAGTAAAACTGAAAAACTAACAAATTCTCTCTC
CCTCTTTCTTAACTTCAGCTGACCAATCCGAGCAGCGAGTTTAAGATCAC
AGTGATGGGACAAACAGCATATGAGTTGTGGGCGCGAACTAAACCTCTTC
TTTATGAACACATGAAAGACGCGATGGTACCCAATGATTACGTCGGTGTC
AAGAACGTCCTATCAGGGTGAGTTGACTTTTTCAGAGAATTTTACGGGTT
CTCTGAGTAGAGGGTGTATAGATAGGATAAGAATTTCTGTTTTTGAAATA
TTGGATGGCCTGTGTGCTTTCCGCTTCTGTACAGGGAAGCTCTTCTAAGT
GTATTTAAATACACCCCGTGTCACATACCCGGTGGGACCCCGCCCCACTG
AAAGATTCGACCAAAATTCCGTCCCCGGAAGGAAAAAACCTGAAAATCAG
TGGAATAAATTGCACTCCTCAACCATCCCCACCTGATTTTTAGCTGTGAA
TAATAGAATTTCTATCCACATTGTGTTTTCGATGGAAATTTTTACTGTTG
GAAAAAGTTTCACTAGGGCTGTGAGACAGGGCTGTTTAGATTGAAATTGG
AACTGTTGGGAATCGTTTGATAAAAAAATGCTGATTTGGTTTTGATTATT
GTTTTTTCGTCCTTTATCAGATCATTGGATGGTTATATTGGAGATTACAA
ATTCTTGAAATATCTCTCACAACTCCCACAATTCTGCCATAAACTAAGAC
TTTACAAAGAGAAACGGAAATCCATATTCAGTGCTTTCATTGTACCGAAG
AACTCGCCCTGGAAAGAGCCATTCTCGCAGGAAATCCTGAACACTTTTGA
GACGGGCAAAATGGCGGAACTGCTAGATCGTTGGTTGTGGTACACAGCTT
GTGAACAAACGGAGAACGACGTCAGTTCTTTCACGTGGCGATATTTCGGT
GGACTTTTCGTCTTTACCGGAGCTTCTATTGGATTTGTCACTTTGGTTTT
GTGTCTGGAATTTCTGGTGAATTGTATTCGTAACGTGTCATGAACATTGT
GTGTTCTTTATATCCATGAAAACAACGTGTGTAGCTTGTGAGCCGTCTCT
TCTACTTGTTGTTTCCCTGCTTTTCTGGAAATGTAACTTTGGTGATAACA
TACTCATCAAGTATTGCGTGTTAAAGACATATGCTAGGACATCGACATAT
ATTGTTGAGATGCACATTGTTGAGCAAATCAACAAAATTTTTACCATAGA
GATTAAAGACATATGGTTGGTAAACTGCCATCTTTCTCACTGGTATGTGA
GCTGAATGAATGACTATAAAAGAAATTTATGTATGAAGTCTTTATAACTG
AGGGGACGATGATATTTAATACTCATTTTTACTATACTACGATTTGTATT
TTTAGACATTTTTAAATTTCGTTATTGTGAAAGTAAACTTTGTGTACCAT
GAAAATCGCAGATTATCGCAATTTCATTATGTAAGCATTTTGAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004478XLOC_004478Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007941-exon-sc0000080-1575043694:649453..650525TCONS_00007941-exon-sc0000080-1575043694:649453..650525Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1575043694:648643..648816TCONS_00007941-exon-sc0000080-1575043694:648643..648816Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1575043694:648205..648273TCONS_00007941-exon-sc0000080-1575043694:648205..648273Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1575043694:647672..647836TCONS_00007941-exon-sc0000080-1575043694:647672..647836Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1575043694:646594..647057TCONS_00007941-exon-sc0000080-1575043694:646594..647057Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1575043694:645572..646427TCONS_00007941-exon-sc0000080-1575043694:645572..646427Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1575043694:644509..644657TCONS_00007941-exon-sc0000080-1575043694:644509..644657Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1575043694:643230..644055TCONS_00007941-exon-sc0000080-1575043694:643230..644055Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1510915933:649453..650525TCONS_00007941-exon-sc0000080-1510915933:649453..650525Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1510915933:648643..648816TCONS_00007941-exon-sc0000080-1510915933:648643..648816Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1510915933:648205..648273TCONS_00007941-exon-sc0000080-1510915933:648205..648273Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1510915933:647672..647836TCONS_00007941-exon-sc0000080-1510915933:647672..647836Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1510915933:646594..647057TCONS_00007941-exon-sc0000080-1510915933:646594..647057Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1510915933:645572..646427TCONS_00007941-exon-sc0000080-1510915933:645572..646427Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1510915933:644509..644657TCONS_00007941-exon-sc0000080-1510915933:644509..644657Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1510915933:643230..644055TCONS_00007941-exon-sc0000080-1510915933:643230..644055Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1491911889:649453..650525TCONS_00007941-exon-sc0000080-1491911889:649453..650525Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1491911889:648643..648816TCONS_00007941-exon-sc0000080-1491911889:648643..648816Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1491911889:648205..648273TCONS_00007941-exon-sc0000080-1491911889:648205..648273Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1491911889:647672..647836TCONS_00007941-exon-sc0000080-1491911889:647672..647836Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1491911889:646594..647057TCONS_00007941-exon-sc0000080-1491911889:646594..647057Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1491911889:645572..646427TCONS_00007941-exon-sc0000080-1491911889:645572..646427Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1491911889:644509..644657TCONS_00007941-exon-sc0000080-1491911889:644509..644657Clytia hemisphaericaexon
TCONS_00007941-exon-sc0000080-1491911889:643230..644055TCONS_00007941-exon-sc0000080-1491911889:643230..644055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:643230..650525 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.171566	0	0	3.7907e-08	0	0.466785	0.0297105	4.00518e-06	0.205215	0	0	0	0	0	0.259758	0	0	0	0	0	0	0	1.28166e-09	0	0	0	0
Blast
[Close]
BLAST of TCONS_00007941 vs. Swiss-Prot (Human)
Match: G3ST1 (Galactosylceramide sulfotransferase OS=Homo sapiens GN=GAL3ST1 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.306e-40
Identity = 88/249 (35.34%), Postives = 140/249 (56.22%), Query Frame = -3 
Query:  340 GSNRLDWPWFFKNT---SFYPLNGTEPNILCNHARFNKQPMTDLMPNDTVYVTILRNPISQFESSFSYMTFDKILGMK---KSEDTLTEFFKDPEKVLVNYVLTQDLRINSDRLKLIQNGMFYDLGLESKDFKNNKEIYKKLEELDHQFHLVMMMEYFDESIVLLKRLLCWELDDFVYFRLKNRAESWRRHISKPLQKKITKWSQADVILYNHFNKTFWNILKNIDQD-FWHEVEMLKAKNTFMRNMCI 1065
            G N  D+P FF  +    + P  G   NI+CNH RF+   +  L+P + +++T+LR+P   FESSF Y  F  ++ +     + D LTEF +DP++             N      ++N +F+DLG ++    ++ ++ + + E++ +FHLV++ EYFDES+VLLK LLCWEL+D +YF+L  R +S    +S  L  + T W+  D  LY HFN +FW  ++   ++    EV  L+  N  MR +CI
Sbjct:  111 GRNDFDYPTFFARSLVQDYRP--GACFNIICNHMRFHYDEVRGLVPTNAIFITVLRDPARLFESSFHY--FGPVVPLTWKLSAGDKLTEFLQDPDRYY---------DPNGFNAHYLRNLLFFDLGYDNSLDPSSPQVQEHILEVERRFHLVLLQEYFDESLVLLKDLLCWELEDVLYFKLNARRDSPVPRLSGELYGRATAWNMLDSHLYRHFNASFWRKVEAFGRERMAREVAALRHANERMRTICI 346
The following BLAST results are available for this feature:
BLAST of TCONS_00007941 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G3ST12.306e-4035.34Galactosylceramide sulfotransferase OS=Homo sapien... [more]
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