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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007928 ID=TCONS_00007928|Name=TCONS_00007928|organism=Clytia hemisphaerica|type=transcript|length=674bp
GTAGCAGCTCCTGAACCAAATGCAGTTCCAGTTGTTGAAGAAATTTCTAC
ACCTGAAGAAACAAAGGAAGTTGAAGCAGTTCCTAACGTCGAGGAAAACA
AAGCAGTTGAAGAAGAGGTCGTTTCACCAGTACCTTTAGATATCGTTGAA
GCAGTTCCTGAAGAAACACCTGTCGATGATCCTCCTGTTATTGAACTTAC
TGGTGTCGACCAGGTCTTAGTGACACACCAATCTACTGAACAACAGACTC
ATAGGGAGTAGCAAGAATTACATAACCTCACATTTTATTTTGcaatatga
atttttttgtagaaattcAGATATTTATAGGAACAAATATTTTATTGtac
aaatgtttttttgtcgtgtttttgttagtttaaaaacaataataaattat
gaaattgaaaacattttcatgcACTATACTAAAAACTATGACAATAAGGA
AGTTGTTTTAATacagaattttgcacaaaaatTCATGCTCTTCCAGGGAT
TGTATCGATCATATTGACTTTTAAAATTCAGTCGTTTTTTCCAGCCCTAA
TTTCCCTTTGCAGTTTTGCCAATGACGTCACTCTTATGGTCACATGAAAG
GTGCTGGTTACTGGAAATTTTTACCAACCAATTAATTTAGCTGGAAAAAT
ATTACCGGGAAAACTTCAGTCAAA Run BLAST on NCBI transcript from alignment at sc0000080:535982..537672- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007928 ID=TCONS_00007928|Name=TCONS_00007928|organism=Clytia hemisphaerica|type=transcript|length=1691bp|location=Sequence derived from alignment at sc0000080:535982..537672- (Clytia hemisphaerica)
GTAGCAGCTCCTGAACCAAATGCAGTTCCAGTTGTTGAAGAAATTTCTAC
ACCTGAAGAAACAAAGGAAGTTGAAGCAGTTCCTAACGTCGAGGAAAACA
AAGCAGTTGAAGAAGAGGTCGTTTCACCAGTACCTTTAGATATCGTTGAA
GCAGTTCCTGAAGAAACACCTGTCGATGATCCTCCTGTTATTGAACTTAC
TGGTGTCGACCAGGTGAATGACTTAAAATTGAAAGTATTAGTTCGTGATT
GTGAAGTTGAAAGACTGAAGCTTGCTATTATGGCTCTTGTTGGTAAGAAA
TCTAAGAAGGGAAAATCTAAGAAAGGGAAAAAGAAGAAGAAGGAAAAACA
CCCAGCTTCCGAAATGCTTTATGATAAAAAGAAATCAGCATCAACTGGCA
ATATTCTTGATTCATGAAAATATGAATAAATCGGTTGAAGGGTTTATTAT
GTGGCACGAGTTGAAATGGCTGTCCGTGTAAAAAAGAAAACGATAGTATG
ACCAGCTGTCAAACACAAAGCATTAACTTTCGAGCTTTTTGGATTGAACA
ATAAATCTGAAATGTGAAATGGGTATCGAGACGGTGCCATTGGCAAAATA
TCAGAGACATTATAGTATTAGAAATTATAATTATTGTCTAAGGTTAGGAC
TTAGAAATCAATACAAAGACAATATTGCATTTGAATAGAAATTGGGTCCT
TAAATACCTGATAGGGATTTTCGCGAAGTAAAACCCTAAAAGAATCAAAT
CTATTAAATTCGCCAAAATAAGCTTCCTTAAGTTTGAACTATGAGTCACT
TCAAGCGCAATATTGTCTTTTGATCAATGCTAAACATTTTGAACAGGCTT
CAAAGAATTTGTAATGGTAGTAAATATAAAAATAACATACCGAGTCTGAC
AGATCTGGAATTTTCAATTATGTTTGTTGATTTTTTAGCATTTGCAGTAA
GTTTGCACTCTGTTGTGGAGATTCTATGAACAAATAAGAATGGTTTCAAT
CAAATAAATATTTCTCTCTCATTAACCAATTAATATTTCCAACGAGTTAC
TTGAATAAGGACTTGGGCTCGAATTTGCCAGCGAATCACTAAAATCAATA
GTTCAAAGACTCCATCTCCAGCTCTAACCATTCAAGCAGCTCGTATGGTG
TAAGGTATAATCATTTCAATGCTTTCTTGTAATGCAGACAGAGAAAAAAA
CTTTTTGTCAAAGCGACTTCGACTTTTTAGGTCTTAGTGACACACCAATC
TACTGAACAACAGACTCATAGGGAGTAGCAAGAATTACATAACCTCACAT
TTTATTTTGCAATATGAATTTTTTTGTAGAAATTCAGATATTTATAGGAA
CAAATATTTTATTGTACAAATGTTTTTTTGTCGTGTTTTTGTTAGTTTAA
AAACAATAATAAATTATGAAATTGAAAACATTTTCATGCACTATACTAAA
AACTATGACAATAAGGAAGTTGTTTTAATACAGAATTTTGCACAAAAATT
CATGCTCTTCCAGGGATTGTATCGATCATATTGACTTTTAAAATTCAGTC
GTTTTTTCCAGCCCTAATTTCCCTTTGCAGTTTTGCCAATGACGTCACTC
TTATGGTCACATGAAAGGTGCTGGTTACTGGAAATTTTTACCAACCAATT
AATTTAGCTGGAAAAATATTACCGGGAAAACTTCAGTCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007928-exon-sc0000080-1575043694:537460..537672 | TCONS_00007928-exon-sc0000080-1575043694:537460..537672 | Clytia hemisphaerica | exon |
| TCONS_00007928-exon-sc0000080-1575043694:535982..536442 | TCONS_00007928-exon-sc0000080-1575043694:535982..536442 | Clytia hemisphaerica | exon |
| TCONS_00007928-exon-sc0000080-1510915933:537460..537672 | TCONS_00007928-exon-sc0000080-1510915933:537460..537672 | Clytia hemisphaerica | exon |
| TCONS_00007928-exon-sc0000080-1510915933:535982..536442 | TCONS_00007928-exon-sc0000080-1510915933:535982..536442 | Clytia hemisphaerica | exon |
| TCONS_00007928-exon-sc0000080-1491911889:537460..537672 | TCONS_00007928-exon-sc0000080-1491911889:537460..537672 | Clytia hemisphaerica | exon |
| TCONS_00007928-exon-sc0000080-1491911889:535982..536442 | TCONS_00007928-exon-sc0000080-1491911889:535982..536442 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080 | supercontig | sc0000080:535982..537672 - |
Blast
The following BLAST results are available for this feature:
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