TCONS_00007877 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007877
Unique NameTCONS_00007877
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3008

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007877 ID=TCONS_00007877|Name=TCONS_00007877|organism=Clytia hemisphaerica|type=transcript|length=3008bp
AGGAAACCTAAACAGACGCTTCTTCGCGGAGGCTTtatcgaatttttcaa
aatattgccttattttacaaatttttcactgaattttgaaaaaaatattc
aaaattcgtgaaattttttatgtattCTGATAGGAGTGATCAATTTTAGG
CAAAAATTGTCCAGGAAAAGGGTAAAACAAACACATCAAACTCTCAGAAA
CAATAAGCTAATGTAATGTTATTCTTGTGAACCGGCCAATCAGAGAGCAG
TATTCGCTTCAGCCCTTCGCTCTGGGCTTCACTACGGATCTCTGATGTAA
GGATAATGTAGCATGAAATGAAAAGTTTAGTAATGTTGTAATGGTATTTG
GTGTTTTCAAAGAATTATCGATGCTCGTTACTCGTTTTATACTTTTAGTT
CTGCCATAGAATTATGGTGCAGAAAATGTCAGGTTCAGGCACACCAACTC
GTATTGTAAAAGCTCTTGAAGATCGATCAAAATCTATAAAAAGATGGATG
CAAAGTGATACTGCAAAACAACAACCTGAGAGAACAGATGAGCAGTTTAC
CATAAAATTTGACAAAGGAACTGTATTTTTATCAGCTGTTGCAAGCTCAG
ATATTGATGAAGTCAAAAAGCTATTGGACAGAGGAGTTGATATAGATACT
ACAAATAATGATGGACTTACTGCGCTTCACCAGGCGTGCATTGATGAGAA
TGATGAGATGGTGGAGCTGTTAATTGACCGAGGTGCAAACATTGAAGCTG
TTGACAATGAAGGATGGACTCCATTGCACGCTGCTGCAAGTGCAGGGAAT
ATCGACATTGCAAGGATTTTGGTAGAAAGTGGGGCAAATCTTGCTGCAGT
AAACAATGAAGGGGAAGTTCCGCTGGATTTGGCAGATGAAGATGACATGG
ACGAATTCTTATCTGATGAAATTGATGCCCAAGAGTTAGAAGTAGAAGAT
GCACGAAATGAAGAAGAGCGATTGATGATTGAACATGCTACAAGCTGgtt
gaataaaaagaaaattgatgatAATCTTGATTGGCAAGAGGCTGGTGCAT
TACACGTTGCTGCTGCCAAAGGTTACAATAAAGTTATTAGTACAATTTTG
CAAGTTTCGAATGCTGATGTGAATATGCGGGATGCTGATGGATGGACTCC
ATTGCATGCTGCCATACATTGGGGAAATCAAACTGCAACAGAACTTTTAA
CTGAAGCTGGAGCAGACTTCGATTTGAAGAATAGCAATTCTCAAACACCA
TGTGATCTTGCTGAAGCTGACTTTCTCAAAGCCGCTGAAAACTGTAGGAA
AAGAGCAAAGGAGCTGGGAAAGAAATCATCCCTCAAAAGGTGAgtttatt
atttcaaaatcagTTTTGTATTGTATCCAAATTGATAATAAGGAAGCACA
CCACTATTGTGGATATCTAatttaactttattttaaaagaacattttgac
tattttataataacaacaaaaatgttttcttatgCAATACTTATTGACTT
ATTTCCTCTTTTTTCCTAGGGGCGACAATGATTTAAATGACAATTTCACC
AAAGAAAAGTATGCAATCGAAATGCTTAAAAAGCAGCCACCAAGGCCTGC
TGTGAAAGGCGCaagagccaaatttaaaaagcaaaacaatggTTCATTAG
TGCCAAGTGGTGATAATGACAACAGCGAAGGAGAGGAAGATGACCAGGGT
GAAGAAGAGGAGAGCGAGGAAAGCGAACCTGAACCCGAACCTGAACCCAA
ACCTGAACCCAAACCTGAACCTGAACCAACTCCGCCTCCACCCGCCGCCC
CTACCAAACAAACCACCTCATCTAGCGTTATCTCGTCCAATAGAACATCG
ACCTTGAATAATGATGTAGATACATCAAATAGTTTAACTAAGACTACTAT
TAAATCTCGTTTCGGTGACCGTGATCGAGATGATAAGAAAGACACTAATA
CTTCAACCTCGGTGACTACTGCCAAAACAACGACAAGTTTCGGGAGTAGA
TACGGCAGGCGTGACCCTGAACCCGAACCTGTTACAACAACGAAATCAAC
GGTCGGTAGTCGATTTGGTACTACCACAACATCTTCACGAATCACCAGCT
CTTTTGATAAGAAACCTGACGACAACACCTCCTCGACTCGTCCCAGTCTT
CAAAATCGACTCAATCCGAAGCGGGATGAAAAAGAGGAGAATGACACCAA
TTCAGTGTTGAATCGATACCGCTTGAACAAAAGCAAAACGAACGATGACA
ACAACTGGCGATCATCACGGAAGAAAGAGGACGAAGATAACCAAGAAACA
GAGACACAGCCTTCGACGAGGCGAACGACACGAACTTACGATACTGGGGG
TAGCACCACTGATACAACCTCCACACGAAGAACCAATCGTACATCCACTG
ATGACGATTCAAGCTCTCGCATGAGTATCGCCGAAAGGCTACATAAAAAG
AATCAAGAACTGCTTGCAACAACTTCAGATAATAACAATTCATCGGGCAG
ATCATGGCAACGCTCTTCAAACCCTTCGACGACCTCTTCAACTTCATCTT
CGGACACGGGGGATACAAAAGATCTACAACGAAAACTCGACCAAGCTGTC
AAAGAAGTAGAAGAATACAAATCCAagtatgaaaaaatgaaaaaggaaaa
agaagaattagAAAAACAACTTAGTCAATATAAAGAAGATATCGATaaAG
TGCAAGATCTAAAGAGCGACAATATACGTCTGAAAGATGAGAATGGGGCG
CTTATCAGAGTTATTAGTAAATTATCACGTACCCCTGCTTCATCTTCTTC
GTGAGTCGTGGATCGTCCGCTGCTTCCTTGtgaattattatattattatt
attgctGAGGTGCTGCTGGTGCTACCGAGGAGAGATGAGCCGctgattaa
atttttttaaataagaaagaGAGAACTTTTTATACTACCTTTCATAGAAC
AGTTGTTTtaataaatgaagaagaagaaggatataaacaacaaaatacaa
CGTCCCAN
Run BLAST on NCBI

transcript from alignment at sc0000080:172808..186346-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007877 ID=TCONS_00007877|Name=TCONS_00007877|organism=Clytia hemisphaerica|type=transcript|length=13539bp|location=Sequence derived from alignment at sc0000080:172808..186346- (Clytia hemisphaerica)
AGGAAACCTAAACAGACGCTTCTTCGCGGAGGCTTTATCGAATTTTTCAA
AATATTGCCTTATTTTACAAATTTTTCACTGAATTTTGAAAAAAATATTC
AAAATTCGTGAAATTTTTTATGTATTCTGATAGGAGTGATCAATTTTAGG
CAAAAATTGTCCAGGAAAAGGGTAAAACAAACACATCAAACTCTCAGAAA
CAATAAGCTAATGTAATGTTATTCTTGTGAACCGGCCAATCAGAGAGCAG
TATTCGCTTCAGCCCTTCGCTCTGGGCTTCACTACGGATCTCTGATGTAA
GGATAATGTAGCATGAAATGAAAAGTTTAGTAATGTTGTAATGGTATTTG
GTGTTTTCAAAGAATTATCGATGCTCGTTACTCGTTTTATACTTTTAGTT
CTGCCATAGAATTATGGTGCAGAAAATGTCAGGTTCAGGCACACCAACTC
GTATTGTAAAAGCTCTTGAAGATCGATCAAAATCTATAAAAAGATGGATG
CAAAGTGATACTGCAAAACAACAACCTGAGAGAACAGATGAGCAGTTTAC
CATAAAATTTGACAAAGGAACTGTATTTTTATCAGCTGTTGCAAGCTCAG
ATATTGATGAAGTCAAAAAGCTATTGGACAGAGGAGTTGATATAGATACT
ACAAATAATGATGGACTTACTGCGCTTCACCAGGTATATACTGGAAGGAA
ATTATTGTATTGCCGTTGTTTTCTAGCTATCAATTAGCTTGCCTTGGCTC
AATCAGCCTGCTTGTCATTTTAATCAATTTTGAAATGAAAGTTTGTTGAT
TTAAAATGCTCATGTCTGCCACTAGCCTTGTTAGGGGCAGGTAATTGCTT
GGTTATTTTTATTGTGCCTTATTATGTACTACGATGAATGATTTATTTCA
TGGACGACCCTGGACACCGCCGTACATTGTACGGTGTTGTACGGTGGGGC
TTGATTTAAATGTCCGGTGGGAATTAAAGGTTAACTATGAAAACACCGTA
CATTTTCCCACCGTACATTAAATTTCCCACCGTACAATAGTACGGTGGGA
ATAAGTTCGCGAAAGACAAGTTCCGTGGTCAAACTTAATGTACCAAAGAA
AGTTTTTCCGACTTAGAAGTTTTTCAGTAAGTCCGACCACGGTTGAATAT
CTAAAACTTTGCATGCTTTCTGAAACTGAAATCAATTTGGTACGGTGGTG
AAATAGGTTAACTCAAAATCCACCCCACCGTACCCACCGTACATCCACCG
TACAATGTACGGCGGTGTCCAGGGTCGTTTTCATGGTTGCCTGATGTGTG
AAATTTGGTTATAGAAAGGATGTTAGCTGTATGATAATCAAAAGCAACTT
TAAACGTTGAATTAGAAGAGTAATTTATATTACTGCAGTCAAATGCACAG
CCAGGCTTCGGTTTTTTTATTGAGTTTATACAAGCAAAAGGAGATACCAT
ATAATTTCATTGGTATTCATAGTAGCTTTAACTTTTAATAGTGTCCTATA
AAAAATACTCTTAATCTTGTACACATGAATTTAAACCTGTCGTTGCCTTT
ACTTAGTTTTAGAACTCCTTTCTATTTGCCAAGTAGTGAAATTTTGGCTG
TTGTGTGGCTGCATTTATTTGCCATTGTCAGATGTATGTCTGGCGCACCT
GACAATGGAGTGACAGAGTTAAATATCTTTTTATCATATTATCCTCCCAG
AAGTTTCTCAACACTTTATTTCTATTTCTATTTGGTTGAGTTGTAGGAGG
AGCCTGTGTATGGCCAATTTTCCCAACTCTACAGCTCATAGCTTTCAATA
GCAGCCCATCAGTGCCTCGGACTAACTACCCAATAGTGTTTAGGAGAATG
GGGCAGTAATTAGTTACCGTAAGTTGGTCTAATGTTGACATCCCTCATCT
AATTTTGACACCCTTCTTTAGAGTTCTTTAGAGGAATAAAAGGTCGGTCA
GAATCAAGAGAGGGATGGCAACATTAGACCAACCTACCGTATTCAAAAGA
CTGCTGGTTCTCCCAATTTTGAGATTTGACCAGTCAGATTAGCTTGAAAG
TCGAGGATACTTTTTGAAAGTTAGCTGTAAGTACTGTAGGTGTACATAAT
AAACCTAAATTAGCAGTATAAAAGATGAGATCTCAGTCACTATAGAAAAA
AGGGTGAGCTTGCAAAATTATTACATTTTTACAAAAAAATCATCAAAACA
AAACAGTGCATATTTTGTCATTTGATTGTTCAATTTGACAATAGAATGTC
TTCCTTCTAAAAAGGTCTATTGAAATTTGACTTTTTCATGCAACCAAAAT
CTTTATAAGAAAGTGGTTCAATATGAGCTTAGCAAAGCTCAAATTGCAGA
TGTAGAAAGATAAGCTCGGTATACATTCACTCCCCATCTGGATAAGGCTA
TCACTATGTCTCACTAACAGCCAATTCGATTGACTTCAAAATATGCCATT
TTTGCCCTGATTGCCAAATATTTTGTATTCGATTGACAAGTGAGTGCCAT
AAATGCCAAATAAAAAAGATGTGGTGAATCTGGCATTCTTGGCATTTTTG
GAACTTACCTCCATACAAACACTGTTCCCACGAGACCTATGTTCTTTTCG
CTCCAATTCTGCCACTTTTGCCAAACATTTTGAAAAATAGAAGACCTTCC
AATGCTAAAGCAAAACAATGCCGATCGACAATTTGATTGGTTAAAAAAAT
CGTTTGCTTTACAAACGCCGACAGAAAACTGCTGACAAAGCATCACAAAA
CGGAAATCATAACGGCGACGTAGCGATGTATAAATTTGCCATGAAGCTGT
GATCTTTTGACATTGAAATTGTGGATTTGGCAACGTTAGTGAGTATGGCA
AATTTGGAAGTCAATCGAATTGGCTGTAACATTCTGCTGATTGGTAGTGT
GAAGGTTTCAATCATTTGCACCCCAATTAACTGTATTTGAATCCCAAGCA
CTTTAAGGCAGGGTTTTAGGGAAATTTGATGATAGACTCTCTACCTTCAC
TCATATATCACTCTCTCTCTCAATCCGGCTGATAATAGAAGTATCGATTG
ATGTCAAATGAGCTTAGCAAAGCTCAAATTGCAGATGTAGAACAATAAGC
ATGGTATACATGGGTTCAATCTGGTTCAATTGCAATTTTGGCATCAAATC
TTATTCATTGTCTGTTGGTTTAATGTCTACCAATATCTTCAATGTCTACA
AGACAACTAATTGAATCCAAACTTTGTGGTATTATATATTATACTAACCT
TGAAATCAACCAGGACTATGACAAGTTTTGTTTCTGTATTCCTGAAAGCA
ATTTTCTACCATTTTCAAAAAGTTCTCTTAGTGCAGCTTAGTGGCTTTTT
AGCAAAGCAAGAGCAAGGATTGTCAGACTTCTGGTCAAAATTGATATCAT
TTAAAAAAGTTTGATTTGATTGGCAAGGTTGCTACTATTTGGCAACAAGC
CTTAGCTGTAAGTTTAATAAAAAACAATAAATATCTCTTAATAATTTAAG
AAGCTTCAAAAAAATGAATGGCAGTGAGTGGGAAAGTCAAAAATATAATT
GCAGTTTGTGTGACATAAAAACCCGAAAAAATGAATTGACCGTGTTTATA
TTCATTGTCATGTAGTTTAAATTTTAAGTGCATTTAGCTTGTTGTTTACA
GCCAATCTTATGTTATTTACACTTTGTGCCAGAATATAGATAATATCAAC
TCAGGTAATCTTAGGGTCGAACAGCATCAAATAATGGGGAAAACATCTAC
AATAGTGATGATTATGCTGCAGCATTTTGTTTTTAGTAAAAAGGTCTTTA
TTTCAAAGGTAGTCATGCATTATATCCTCTCTGGCTACATAAACATTTTT
TCAGTTGATAAGTATTGCTAAATACTAGAAACTTAAGAAATTTGCAAAGT
GGGAAAACTGGGGATACTGACATGAGAGGTATTTTTTTATACATTAAAAA
ATTGTTTTATTAATTGTTCCAAAATCTCCCTAAGTTTGGAAGGGACTTCC
ACCAGGTTATTGATGGTTATCTAACCCAACAGAGCAAAGTGTCCTGCTAA
AGGACTGCACACCTTATGAATACCCTGTTAACGTCTTGTTGCTGTTAAAA
GGGGATGACTAGTATTATTTAAGTATTGTTGACACCAGACCAAATCATTT
TACAGTCGCATTGTTTTGTTTGATCTTTAAAAAATGACACTTTGCAAGAT
AAGCACATTTTGCAAGATACTTTCAGAAAGCTTTAAATATATGAACCACT
GCAATACTATGTATTTCACTATAATCACCTAAACTATTGAGTGGGGCATT
GAGTTTACTGTCTATAGACCTAATTATTTTTAAGTTATCATTTTATCTTT
ACCAATGTTTTAATGCTCCTGAAAAATTATGGTTATAACATTTCATTTGA
CTATTACAGAAAAAATAATTTTTATTCTCTCTAAATTCAAGGCTTGCAGA
AAGTAGCATTTTCGTTATCAGAAATAAGTTGATGAGTAAAGTCTGAAAAA
TTTGGCANAAGCCTTAGCTGTAAGTTTAATAAAAAACAATAAATATCTCT
TAATAATTTAAGAAGCTTCAAAAAAATGAATGGCAGTGAGTGGGAAAGTC
AAAAATATAATTGCAGTTTGTGTGACATAAAAACCCGAAAAAATGAATTG
ACCGTGTTTATATTCATTGTCATGTAGTTTAAATTTTAAGTGCATTTAGC
TTGTTGTTTACAGCCAATCTTATGTTATTTACACTTTGTGCCAGAATATA
GATAATATCAACTCAGGTAATCTTAGGGTCGAACAGCATCAAATAATGGG
GAAAACATCTACAATAGTGATGATTATGCTGCAGCATTTTGTTTTTAGTA
AAAAGGTCTTTATTTCAAAGGTAGTCATGCATTATATCCTCTTTGGTTAC
ATAAACATTTTTTCAGTTGATAAGTATTGCTAAATACTAGAAACTTAAGA
AATTTGCAAAGTGGGAAAACTGGGGATACTGACATGAGAGGTATTTTTTT
ATACATTAAAAAATTGTTTTATTAATTGTTCCAAAATCTCCCTAAGTTTG
GAAGGGACTTCCACCAGGTTATTGATGGTTATCTAACCCAACAGAGCAAA
GTGTCCTGCTAAAGGACTGCACACCTTATGAATACCCTGTTAACGTCTTG
TTGCTGTTAAAAGGGGATGACTAGTATTATTTAAGTATTGTTGACACCAG
ACCAAATCATTTTACAGTCGCATTGTTTTGTTTGATCTTTAAAAAATGAC
ACTTTGCAAGATAAGCACATTTTGCAAGATACTTTCAGAAAGCTTTAAAT
ATATGAACCACTGCAATACTATGTATTTCACTATAATCACCTAAACTATT
GAGTGGGGCATTGAGTTTACTGTCTATAGACCTAATTATTTTTAAGTTAT
CATTTTATCTTTACCAATGTTTTAATGCTCCTGAAAAATTATGGTTATAA
CATTTCATTTGACTATTACAGAAAAAATAATTTTTATTCTCTCTAAATTC
AAGGCTTGCAGAAAGTAGCATTTTCGTTATCAGAAATAAGTTGATGAGTA
AAGTCTGAAAAATTTGGCAGAAATAGTTGGAGTTTGAATAAGTATCACCA
GCATAATCAGTTTTGTTGTAAACTTTTGGTTCTATGTGTCTGATCATGAT
GATAAGCAACATTTTCACTTTGCCATGTTTTGCTTTATGTATCTGTAAGA
TTTTGGAAATCATTGTTCTATGTTTTGAAATTAGTTTAAACAATGCTAAG
CTGTGTCATAAACTTCTTGCACATTTTTTTGCAGGCGTGCATTGATGAGA
ATGATGAGATGGTGGAGCTGTTAATTGACCGAGGTGCAAACATTGAAGCT
GTTGACAATGAAGGATGGACTCCATTGCACGCTGCTGCAAGTGCAGGGAA
TATCGACATTGCAAGGTATATTTAGGACAACATCTTAAAAGAGTTATGAT
AACTAATCATTCTTGCTTCTCACTGCTTGACCTTCACATGATACAATTTC
GTTTTTGACACAAAATACTGGCTCAAAATTTTAAGGATTAAATTAAATGT
TTTTCTTAATTCTCTATTCTCCTAATCTCCAACAAGCTTTAATAAGCTTT
GACCAGACTAATGTTATAACTGACTAATCCAGATGTTAATTTTAGGGGAA
TTCCTTGTTAATACTTTACGGCCTCTGCTGTGTGCAATGTTTATCAAAAA
CACCTGACCTAGACCTCTTAGACATCTTTTTGTGTTTTATAAAAATATTA
TCATGCATATTTCAAATTAATGTTGACATTTTTCATTAGTTTGAAATATG
AAGATAGTAAAAAAGGTTTTTGAAATCAAAAAGTATTCTTATTTAAAACA
AAAAAATTCTCTATCATTTTAGGATTTTGGTAGAAAGTGGGGCAAATCTT
GCTGCAGTAAACAATGAAGGGGAAGTTCCGCTGGATTTGGCAGATGAAGA
TGACATGGACGAATTCTTATCTGATGAAATTGATGCCCAAGGTTTTAATA
CATTTTTGTTTTGAAACCGAAATGTTTTCTCCTGGACTTGAAATATAATA
TATGAATACAATGATACAAGTTTTAGCGTGAAAATTATTTCTCAAACAAG
GATATAAAGTGAGGAGTGTCATTACCAAAAATCTCAGATATATTGATGTT
TAGTGACTGACTTGAGAACATTTTTATTGCCATAACCCAAAAATTCCTTA
TAAACTTACTAGCATTCAACCTTACTTGAACTGCAATTAAGTTTCAATTC
AAGTAGTTTATGAGTTTCTTCAACCTTGATCTTTAATGTTGATTATAATT
TTACCATATTACAACTAATTTTCACCAACAGACTTAGAAGTAGAAGATGC
ACGAAATGAAGAAGAGCGATTGATGATTGAACATGCTACAAGCTGGTTGA
ATAAAAAGAAAATTGATGATAATCTTGATTGGCAAGGTAGGCTAAAATAT
ACATAATCAAGTACTAGATCAAGATGGATAGGTGTTTTTTCAAGTTTTGA
ATTTAAAACTCAATAAGAATCACATCATATTCCTAACCTTTCTGACTTAC
AAGACTTCATGGACATTTGGTGTGAAAGCTCTGTTTGTCATGACTTGTTT
GATTGATCAGGCCTTTTTTTATTCTTCTATTTTTCATTACAGAGGCTGGT
GCATTACACGTTGCTGCTGCCAAAGGTTACAATAAAGTTATTAGGTAATA
ATGAGGCTTCTTTTCTAATTTTTGTCGTAAACATTGAAATTTTCATGAAG
ACATGTTACTACACAGTTCTGTATAGTCTTTGGCTTTGCTTTTATTAGAT
CTTTATAAGTGATTATAATCTTTATATGAAAATATTATGTTATGCTGGTT
TTTAGGTGATGTTTCTCTGTTGATAAGCCAAGTAGAACAAATTTATCCTT
TCTGTTTACATATTCTTACTATTCTCTCTAAAGTACAATTTTGCAAGTTT
CGAATGCTGATGTGAATATGCGGGATGCTGATGGATGGACTCCATTGCAT
GCTGCCATACATTGGGGAAATCAAACTGCAACAGAACTTTTAACTGAAGC
TGGAGCAGACTTCGATTTGAAGAATAGCAATGTAAGTTAGCATTAGAGTA
TTTTATGTTTGNAATTTTACCATATTACAACTAATTTTCACCAACAGAGT
TAGAAGTAGAAGATGCACGAAATGAAGAAGAGCGATTGATGATTGAACAT
GCTACAAGCTGGTTGAATAAAAAGAAAATTGATGATAATCTTGATTGGCA
AGGTAGGCTAAAATATACATAATCAAGTACTAGATCAAGATGGATAGGTG
TTTTTTCAAGTTTTGAATTTAAAACTCAATAAGAATCACATCATATTCCT
AACCTTTCTGACTTACAAGACTTCATGGACATTTGGTGTGAAAGCTCTGT
TTGTCATGACTTGTTTGATTGATCAGGCCTTTTTTTATTCCTGCTATTTT
TCATTGCAGAGGCTGGTGCATTACACGTTGCTGCTGCCAAAGGTTACAAT
AAAGTTATTAGGTAATAATGAGGCTTTTTTTCTAATTTTTGTCGTAAACA
TTGAAGTTTTCATGAAGACATGTTACTACACAGTTCTGTATAGTCTTTGG
CTTTGCTTTTATTAGATCTTTATAAGTGATTATAATCTTTATATGAAAAT
ATTATGTTATGCTGGTTTTTAGGTGATGTTTCTCTGTTGATAAGCCAAGT
AGAACGAATTTATCCTTTCTGTTTACATATTCTTACTATTCTCTCTAAAG
TACAATTTTGCAAGTTTCGAATGCTGATGTGAATATGCGGGATGCTGATG
GATGGACTCCATTGCATGCTGCCATACATTGGGGAAATCAAACTGCAACA
GAACTTTTAACTGAAGCTGGAGCAGACTTCGATTTGAAGAATAGCAATGT
AAGTTAGCATTAGAGTATTTTATGTTTGAAATTATTTGTTTATGCAGGTT
TATTTACTGCCAGTTAAAGATAAACCAACCTTCCAAATGATATTCTAAAG
GGGCATCATATTTTATTGTTTTGATATTATGTTTTAGCCAACTTTGATAT
CAATTTTTACATTTAGTCTCAAACACCATGTGATCTTGCTGAAGCTGACT
TTCTCAAAGCCGCTGAAAACTGTAGGAAAAGAGCAAAGGAGCTGGGAAAG
GTGAGATAAGTGTGGGTTAGGATACCATTTGATAATGTTACTATCATTTT
TTATGCATTTTCAATGTAATGCCTAGAAGCTCGAAAGATGGATAGCTTTC
CAACATTTCTCCAATATGATAAAGCTGATTAGCTTTAAGTTTTTATGCAT
GGCATTTGATTTCATTCATTTAGATGATAATAAAATATCTACTTTAAAAG
CTCTCTTTTCATTAAAGCTTCCCATTGGAAAAAGTTAATAGGATTAATGC
TTGGTTTCCCATCATAGAAAGTATCATCTCAATTCTATGAACACAGCTAT
AAAGCTAATCATCCTTTCCCCCCTTGTTTGTTCCTTCTTGTCATTACACC
TATCTTTTTGTTTGTTTCTTTTAGAAATCATCCCTCAAAAGGTGAGTTTA
TTATTTCAAAATCAGTTTTGTATTGTATCCAAATTGATAATAAGGAAGCA
CACCACTATTGTGGATATCTAATTTAACTTTATTTTAAAAGAACATTTTG
ACTATTTTATAATAACAACAAAAATGTTTTCTTATGCAATACTTATTGAC
TTATTTCCTCTTTTTTCCTAGGGGCGACAATGATTTAAATGAGTAAGTTT
ATTTGACAAATTTCCATTTAAAAACTTTTTCTTTTAAATATCAAATAGTG
GAAACCTGAATCAAATAATACCCTTTAAAAGTCTTTTATTGAAATTCTAC
GAATAAATCTTGGAATAAAGCCTGGAAAATCTTGCCGTTCATTTATTAAT
ATAAAGCTACGATCTCTATTTTTAAAAGCTTCAAAAAGGTTAAAAGATTC
CTTTCCCGAAATTTGTTACAATCATCTCTATTCATTTGGAAAATGAATTT
CAAATCTTCTTTTCAGCAATTTCACCAAAGAAAAGTATGCAATCGAAATG
CTTAAAAAGCAGCCACCAAGGCCTGCTGTGAAAGGCGCAAGAGCCAAGTT
TAAAAAGCAAAACAATGGTTNAAAGCAGCCACCAAGGCCTGCTGTGAAAG
GCGCAAGAGCCAAATTTAAAAAGCAAAACAATGGTTCATTAGTGCCAAGT
GGTGATAATGACAACAGCGAAGGAGAGGAAGATGACCAGGGTGAAGAAGA
GGAGAGCGAGGAAAGCGAACCTGAACCCGAACCTGAACCCAAACCTGAAC
CCAAACCTGAACCTGAACCAACTCCGCCTCCACCCGCCGCCCCTACCAAA
CAAACCACCTCATCTAGCGTTATCTCGTCCAATAGAACATCGACCTTGAA
TAATGATGTAGATACATCAAATAGTTTAACTAAGACTACTATTAAATCTC
GTTTCGGTGACCGTGATCGAGATGATAAGAAAGACACTAATACTTCAACC
TCGGTGACTACTGCCAAAACAACGACAAGTTTCGGGAGTAGATACGGCAG
GCGTGACCCTGAACCCGAACCTGTTACAACAACGAAATCAACGGTCGGTA
GTCGATTTGGTACTACCACAACATCTTCACGAATCACCAGCTCTTTTGAT
AAGAAACCTGACGACAACACCTCCTCGACTCGTCCCAGTCTTCAAAATCG
ACTCAATCCGAAGCGGGATGAAAAAGAGGAGAATGACACCAATTCAGTGT
TGAATCGATACCGCTTGAACAAAAGCAAAACGAACGATGACAACAACTGG
CGATCATCACGGAAGAAAGAGGTATGTCGTCTTCTATTATGCCAGGGCTT
GATTTTCTATCTTGTTTGTTTATATGATATAGCTCTCTCCGTTTCCTAAT
TCGGTAAGGTGATACTTTTGTTACTTTTCGTGCGCTTTAAGATAACCTTT
AAGATTTAATCGCGTATGTTATGTATGTTGTTTCTTTCTTCTCACAATTT
TTTTCTTCGAGAAGAGGTTTTTCAGATTCCCCTCACTTTTTCTGTTGTTT
TGGTTCGGTGTTATCTCGTCAATGAAAAGTTAGAAAGCTAAAAGGTTCAT
GTCTCTGAACAACTTGTCTGATATGCGTTTGTGATTTGTTGTCTGTAACG
TGAACGTTTTTTGACCACAGAAGGAAAGATCTATAAGAATCTATTCTTAA
CTCTTGAACAAGTGTGTTATTTTTGTAATGAAGGNAACAATTGATTTACG
ACCGAACAATAACCAAGACAATTATTCGACAAAATAAAGTTGAAAGGCGC
GGTGAATTGTTCTTTTGTTTTTGATGGAGGAGAGAATAATGATTGCAAGC
AGGCTGTTTTTGTGTTGTTGATGATGATGGAATGATAAACCGGTTTGTGT
GTGTATACACAGAGAAAGAAATATGGCTGATGTCTTCTTACTTAGGAAAT
AAATAATTCCCTAGCCTTTTTTGTTGTTCTCTTGTTTTATATATGGAAAA
TTTTTACTTGCTTTGATTATTTTGCTGGGATTCTATTATTTATCAATGGT
TTTTACATGTACATAAAATTCACCTACTACAACTACCAAAAAAAATGTTA
CAAAATAGATATAGACGACGCTATAGGGTATGTTGTTGATCTTTACAGGG
GTTGGTTGGTAATTGAGCTTTATTATTTTCTTGTGGTTGCAATCGTAGTG
TCTTTTATTATCAAGGCTGGATGATTGAAAATCTCTTTAGTTTGTTTTAA
TACTTTGATGTAGAGTTTCGAACATTAAGTTTGTAAGCTGAATGTTAAAA
TTGTTCGAATTTTACCTTATAATCAATTTTGGTTTTAGCTTCGAGAAAGT
TTTCATAACTAGTAAAGTTTCAAGGATCTTTGGTTGTGCAGTATGGAATG
CAATGGATTGATTTTAGTCACAAATTGTTTAATATTACATCGTTTTTCAT
GATTTTTTGTTTGTTTCCTCAGGACGAAGATAACCAAGAAACAGAGACAC
AGCCTTCGACGAGGCGAACGACACGAACTTACGATACTGGGGGTAGCACC
ACTGATACAACCTCCACACGAAGAACCAATCGTACATCCACTGATGACGA
TTCAAGCTCTCGCATGGTAAGCAGTAACGTTTTTGTTGGGAAGATAATTG
AGAGAAAGTAAAGTTAAGCTATTTTTTCAGGTTCCTCGTTTTATTGAGTT
CGAGTCTTTGAACAATCTTTTAGAGAGAGATGAAATAATTTTCATGAAAG
TGTTCAACGAAAGCATGCACTTGATCAAACCATTTCTCTTCCTCACGTTT
AAAAGCAGGGAGTATCTCTTTCTCCCTTTTCTTCAAAGGAATGTCAGGGA
TAAAGTTTCTGTTTTATTTGCTTTGACGTTTGTTGAAAATATCTCAAATT
TCTTGCTGCCATTTTGATTCCTGTTGTTTCTTCAACCGACTGTTTTCTCC
TTGCTTCTTTACAGAGTATCGCCGAAAGGCTACATAAAAAGAATCAAGAA
CTGCTTGCAACAACTTCAGATAATAACAATTCATCGGGCAGATCATGGCA
ACGCTCTTCAAACCCTTCGACGACCTCTTCAACTGTAAGCATTTCCTAAA
TTCTTTTAGTACCAAAGGGAATGTAGTTGTTATTTCTTAGCAATAACTTT
TTTCACAAATGATCCCCCTTTCTCTTTGATAAGAGGCAAACCTATTTTCT
CTCTGATTATTAAAAGGAGGACATACAGAGCGCAAGCATCATACAATATT
ATCATTATTCAGTAATCCCTGCTGTGCAGTGGCAAAACTAATAGCTCCAG
TTCAATTCCATAGGAGACTGAAGCTTTTACAATGTATGAGGTTTTTCAGA
TAGGATGATTGTGTCTTGTTTTATACTTTCCAAATCTTTGGTCTAGTAGG
AGTTTGAAACTTAATATTTCTTAATTATCACTGATGATAGGCCTGACGGA
CATAATGACCAGTTCTTCTCTTCACTTTCAGTCATCTTCGGACACGGGGG
ATACAAAAGATCTACAACGAAAACTCGACCAAGCTGTCAAAGAAGTAGAA
GAATACAAATCCAAGTATGAAAAAATGAAAAAGGTAAGCATATTTTCTTT
CATGTGAAATTCCATTACACCATGTTTTTTTTAAATCAATCATTGATCAG
TACATGTTTCTTTTTACAAGAACATCCAAAATTTTTGAAGCCTTCGGATG
TTCTTATTCTCACCATTTGTGCTACAATTTCCTAAGAAATGGGGTGTTTT
AGAGCCCACTAAGCCATCGAAGCCTTATGATCTTATATTATTTGTTCTTA
TAAAAACGTGTGGTTTGGCTATTTCATTGGCACTTCAATTTCTCATGAGT
CAATTTTTTTGGACTTTTAAATTATTTGTTTTTATTTGTTTTCAGGAAAA
AGAAGAATTAGAAAAACAACTTAGTCAATATAAAGAAGATATCGATGTAA
GTATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTG
ATTGATCATTGATTGATCATTGATTGATTGATTGATTTTGTAAGTTTTTG
AGCAATCCAGAAATGTATGGGCCTAGAGTATTAGGGTTTACACTTGCCTT
TTTTTCAAACGTTATCTTGATGATTGCCTTCCCGAATCAATATAATTGGC
AGCAACACTGCAATATGCAATATTTCTTAACATGCATTGCTCTGTCTAAA
TCAATTTTTTGTTTTTATATTTTGTAGAAAGTGCAAGATCTAAAGAGCGA
CAATATACGTCTGAAAGATGAGAATGGGGCGCTTATCAGAGTTATTAGTA
AATTATCACGTACCCCTGCTTCATCTTCTTCGTGAGTCGTGGATCGTCCG
CTGCTTCCTTGTGAATTATTATATTATTATTATTGCTGAGGTGCTGCTGG
TGCTACCGAGGAGAGATGAGCCGCTGATTAAATTTTTTTAAATAAGAAAG
AGAGAACTTTTTATACTACCTTTCATAGAACAGTTGTTTTAATAAATGAA
GAAGAAGAAGGATATAAACAACAAAATACAACGTCCCAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004461XLOC_004461Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007877-exon-sc0000080-1575043694:185664..186346TCONS_00007877-exon-sc0000080-1575043694:185664..186346Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:180432..180562TCONS_00007877-exon-sc0000080-1575043694:180432..180562Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:179856..179974TCONS_00007877-exon-sc0000080-1575043694:179856..179974Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:178595..178699TCONS_00007877-exon-sc0000080-1575043694:178595..178699Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:178336..178387TCONS_00007877-exon-sc0000080-1575043694:178336..178387Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:177949..178096TCONS_00007877-exon-sc0000080-1575043694:177949..178096Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:177697..177780TCONS_00007877-exon-sc0000080-1575043694:177697..177780Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:177105..177322TCONS_00007877-exon-sc0000080-1575043694:177105..177322Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:176777..176830TCONS_00007877-exon-sc0000080-1575043694:176777..176830Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:176026..176710TCONS_00007877-exon-sc0000080-1575043694:176026..176710Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:174731..174874TCONS_00007877-exon-sc0000080-1575043694:174731..174874Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:174263..174382TCONS_00007877-exon-sc0000080-1575043694:174263..174382Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:173764..173865TCONS_00007877-exon-sc0000080-1575043694:173764..173865Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:173401..173451TCONS_00007877-exon-sc0000080-1575043694:173401..173451Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1575043694:172808..173119TCONS_00007877-exon-sc0000080-1575043694:172808..173119Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:185664..186346TCONS_00007877-exon-sc0000080-1510915933:185664..186346Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:180432..180562TCONS_00007877-exon-sc0000080-1510915933:180432..180562Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:179856..179974TCONS_00007877-exon-sc0000080-1510915933:179856..179974Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:178595..178699TCONS_00007877-exon-sc0000080-1510915933:178595..178699Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:178336..178387TCONS_00007877-exon-sc0000080-1510915933:178336..178387Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:177949..178096TCONS_00007877-exon-sc0000080-1510915933:177949..178096Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:177697..177780TCONS_00007877-exon-sc0000080-1510915933:177697..177780Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:177105..177322TCONS_00007877-exon-sc0000080-1510915933:177105..177322Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:176777..176830TCONS_00007877-exon-sc0000080-1510915933:176777..176830Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:176026..176710TCONS_00007877-exon-sc0000080-1510915933:176026..176710Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:174731..174874TCONS_00007877-exon-sc0000080-1510915933:174731..174874Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:174263..174382TCONS_00007877-exon-sc0000080-1510915933:174263..174382Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:173764..173865TCONS_00007877-exon-sc0000080-1510915933:173764..173865Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:173401..173451TCONS_00007877-exon-sc0000080-1510915933:173401..173451Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1510915933:172808..173119TCONS_00007877-exon-sc0000080-1510915933:172808..173119Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:185664..186346TCONS_00007877-exon-sc0000080-1491911889:185664..186346Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:180432..180562TCONS_00007877-exon-sc0000080-1491911889:180432..180562Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:179856..179974TCONS_00007877-exon-sc0000080-1491911889:179856..179974Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:178595..178699TCONS_00007877-exon-sc0000080-1491911889:178595..178699Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:178336..178387TCONS_00007877-exon-sc0000080-1491911889:178336..178387Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:177949..178096TCONS_00007877-exon-sc0000080-1491911889:177949..178096Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:177697..177780TCONS_00007877-exon-sc0000080-1491911889:177697..177780Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:177105..177322TCONS_00007877-exon-sc0000080-1491911889:177105..177322Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:176777..176830TCONS_00007877-exon-sc0000080-1491911889:176777..176830Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:176026..176710TCONS_00007877-exon-sc0000080-1491911889:176026..176710Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:174731..174874TCONS_00007877-exon-sc0000080-1491911889:174731..174874Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:174263..174382TCONS_00007877-exon-sc0000080-1491911889:174263..174382Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:173764..173865TCONS_00007877-exon-sc0000080-1491911889:173764..173865Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:173401..173451TCONS_00007877-exon-sc0000080-1491911889:173401..173451Clytia hemisphaericaexon
TCONS_00007877-exon-sc0000080-1491911889:172808..173119TCONS_00007877-exon-sc0000080-1491911889:172808..173119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:172808..186346 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.7531	24.2396	11.6072	8.77768	121.749	92.2919	139.395	152.172	74.3377	106.795	57.8253	52.796	83.0209	73.241	23.0596	23.0126	46.0894	43.1647	36.5951	40.3479	40.097	35.524	37.1971	33.498	56.923	63.1574	34.7175	32.3361	43.3292	74.475
Blast
[Close]
BLAST of TCONS_00007877 vs. Swiss-Prot (Human)
Match: MYPT1 (Protein phosphatase 1 regulatory subunit 12A OS=Homo sapiens GN=PPP1R12A PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.226e-73
Identity = 138/286 (48.25%), Postives = 194/286 (67.83%), Query Frame = 3 
Query:  450 RIVKALEDRSKSIKRWMQSDTAKQQPERTDEQFTIKFDKGTVFLSAVASSDIDEVKKLLDRGVDIDTTNNDGLTALHQACIDENDEMVELLIDRGANIEAVDNEGWTPLHAAASAGNIDIARILVESGANLAAVNNEGEVPLDLADEDDMDEFLSDEIDAQELEVEDARNEEERLMIEHATSWLNKKKIDDNLDWQEAG-ALHVAAAKGYNKVISTILQVSNADVNMRDADGWTPLHAAIHWGNQTATELLTEAGADFDLKNSNSQTPCDLAEADFLKAAENCRKR 1304
            ++  A + R++ +KRW+ S+T  + P    ++  +KFD G VFL+A +S D DEV KLL RG DI+  N DGLTALHQACID+N +MV+ L++ GANI   DNEGW PLHAAAS G +DIA  L+  GA++ AVN+EG+ PLD+A+E+ M+E L +E++ Q +++E AR EEER+M+  A  WLN   I+D    +  G ALHVAAAKGY +V+  ++Q +  DVN++D DGWTPLHAA HWG + A  +L +   D ++ N   QT  D+A+ D L   E  +K+
Sbjct:    2 KMADAKQKRNEQLKRWIGSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLLHRGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEFLIGQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ-AGYDVNIKDYDGWTPLHAAAHWGKEEACRILVDNLCDMEMVNKVGQTAFDVADEDILGYLEELQKK 286
The following BLAST results are available for this feature:
BLAST of TCONS_00007877 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYPT11.226e-7348.25Protein phosphatase 1 regulatory subunit 12A OS=Ho... [more]
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