TCONS_00007869 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007869
Unique NameTCONS_00007869
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1549

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007869 ID=TCONS_00007869|Name=TCONS_00007869|organism=Clytia hemisphaerica|type=transcript|length=1549bp
GCCGACTACTAGTAAAAAAGCCAAGATTTTAAGTCAATAAGAAGATATGT
GCTGCATTCTTTCAATGAATTTGAAAGGATTCTTTCATGATTTTAACCCC
AGTAAATGTGTTGTGTACTTTGCATTACTGATCTTCTCGATATTACTTGG
CTTGCGTCTTGATGAAGTTGTGACATGGAATTTCTTTATTGTGTTCATTC
CACTATGGCTTTGGAAATTGTTGGTATTTTCTGGCGTCACTGTCGGAGCA
ATTGTATGGGTCAAACATCCTGAATACAGAGAGACCAATGTAGAGTTACA
AGCCATGATGATAGCATCATGTTTCCACCTCTTGTTGATGTTATTCGAAG
TTTTGATGTGCATGAATCTTCAATATAGCATCGCATCATACCGTGTGGTG
TTTATTCCAATGTATTTCATGTCTTTTATGGCCATTGTTGGTTGTGTTTG
GGGATATCGCCATGAAAGACAACTTGAAttggaaacgtttttttcgatca
atgttttgcAATTTATATGTCTATCATTAAAATGGGACAGTGTCATCAGT
TGGAGTTGGGTGGTAGTGTTTGTACCATTGTGGATCATTTTGACGTTGTT
ATCGGTCTGCGTTTTATATTACATCATCTGGGCTTTACTGTTCATGAGAT
CACCAGAGATTACCAACACACAGCGCAATGGTCACTTGGTCAACTCATTC
ATGTCATGTTTTATTGTTATCCCTCTCCTCACATTCATGATCATGTTGGT
TCGACAATTGGACAGATATTCGGTGAATGCACATTACACGACCACCTTCA
TCCCTCTTCAAATCTCATTGGTCAGCCTCATTGTCACTTCTTTCTATCAA
AAAGGCGGCAACCAATGGTGGTTTGGAATGCGAAAAGATTTTTGTGAGTT
TCTACTGGACGCGATACCGTTCTTACGAGAATACGGAAATATTTCGTACA
AATTTTCGGATACTGTTGTAGCGGACGCTAATGAGAGTGATGGGAGTAGT
TCTTCTATTGAACTTTCGAACACGCAAGAATCGTCGAAAATACGTGAAGC
GAATAAACCAGTAGCTTCTGTACTGGTGCTTGATATCCCTGATTGATGTT
TGCATGTAATGCGTTCAGAGAAACAAATGGAAGGAAGTTGGTGAAAATGC
GTTCATAGGTTTACCGCAAATAATCGGTTTTGCATACGCATCACGATAAC
CCCACAGGGTTTTTTAGCTGTGTTTTCACACACATATACAGAGTCAAAAC
AATGATACGGAAAGTATATAAACTTGTTTTGAGGTATTGGTTGAGAGGCA
CTGTAGATATAAAGCCGAGAAACAATTCGTAAATTCACAATCCATTGACG
TgaatttattaattattttatttatcgaCAATGTAcggctttaaaaaatc
ttctcTGAAGTTAAAAAAAACGGAAAGCCAAAATCGAGTCTGTTTTCTTT
tataccatgaacatataaacgactggacatccatctcctttgtctttttg
tagaaaaggctgctagcttcgttgccgcctcgttaaaagcataaaatga
Run BLAST on NCBI

transcript from alignment at sc0000080:51586..70670-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007869 ID=TCONS_00007869|Name=TCONS_00007869|organism=Clytia hemisphaerica|type=transcript|length=19085bp|location=Sequence derived from alignment at sc0000080:51586..70670- (Clytia hemisphaerica)
GCCGACTACTAGTAAAAAAGCCAAGATTTTAAGGTAATCTTTTTTGCTTT
TCATTTTCTTTCAATTTTGTCTTCTTTTTTTTATCTCTACACAATTACTT
TTCATTTTTGATACTAACCATTGCATTTCAATTGAAGATTCATCGTTTAT
TTGGAACACCTGCTCTAAGAGTAACCATCTGACCATTTTTTCTATGTATA
ATGCTGCTACTAAATGGAAGAAGCCACTATAAGTGTGCTACGCGCACCCG
TATAGTAGAGAGATTATGTATCAGAGATATTCTACGGCTACGGTTGCTGG
GCTGCCCATGCAGGTTGTCACCAAAGGCGACATCTCATTGCCTACTTTGC
TCTGCTGTACAGGAAAAACTAGTACGCTAGTATGTGCGTGTGTGTTGCTG
GATAGGGGGTCCTTTTGGAAGAATTGTAATCACAACAGTTAGCCTAATCT
GTGAGGTCTGTATATCCCTTATATATGTCACTTTATAAATTCACTCAATT
TACAGTTACGGTAATTTTTCAGCAGGGGCTCTGTAGCCTAGTGGTTAGCA
AACAAGTCAGGTTTCAAATTACCGGTTGTATTACTTTGGTGGTTCGAATC
GAATCAAATTTGAGAATTCCGGCCGTGTTCGGGCCACACGCGGGCCACAC
GCGGGCCAATTTTTGAAAACATGATTTAAACAGGCGTTTAATTTCAGGAC
TGAATTTTTTTAACATTTTCTTTGAGAAAAAACTTGGTTTCTCTTAATAT
ATGAATGTTGTAAATTCATATAAATATTAAATGTCTTATTTGGTATGAAA
ACATAGTTATAAATATACTTAGGGTGGAAATATTTGCTAATAAACTGGTC
CTGGTTTTAAACTGAAGCGTGTCCACGCATTGAGTTTAAAGCCCAAAGGG
CTAGAATTCAATCTCTAACCTTTCTCAGGCAAGAAAAAGTTAAGCCTTAA
AAAATGCGTCGCATTTTTGACGACAGATTGAATCTAGCAATTCCTTTGTT
TATGATTGATATTTTTTTCGAAATTTAGCGGTAAATTTTGATTTCAACCT
GTCATTTGTGTAAAAACCAGGCAAGCCGCTCAAGGCCGCGCAACTTTGGT
AGGATTTGTTGGCTTCAAATCCTACCAAAGAGATTGCCTTCTAGCCCTTC
AGGCTTATACTTCATTGTGTCCACGGGAAGCTTGTAAAGTTTTTTTGAGC
GATATAAACAAAACAGACAAATCTTATTTTGTACTATTTTGTTTGATTGG
ACATGCTGAATCAATTTAAATATGGAATATGGAATCTCCTGGCATGGCCC
GAACATAGCCTGAATGACTCGGGTCATGTTCGGGCCAAAAGAATTGATAG
GGTCTCTCGGCCCGAACATGGTCTGAAGAGGCCCAAGAATTCTCGGGCCA
TGTCGAGGGTCGTAGCCGCACCTGTGAAAACAGGGTAGACAGCATATATG
CTATTGGTAAATTGCTGAATGTTTTTGCAACATTTCAAAATTTGTCTGCC
CGGTACAGAAATATGTTGTATCCATTAAATAAGCAAATGTCTCTGGAAAT
GGAGGAAAACATAGTTGAACGCTAAACTTTTGTATATTCATCAGAAAAAG
GGTGAAAAGTTTTCTCAAGCGAAGGGTATGCTAGCTTAATACGATAGTGA
CATGGATCATCAGTGAATGTTAGTCAATTATCATTATCCCTTTATTTTCA
TTTCTGGAATTTTACAAAAAGGAAAAATACAAAAGTTGTATCTTTTACTG
CTCTATCAGTCGAGTACTGAGCGATCTTTTCAAGTCATCTCTATACAAAA
AAGAAAAGCAAAAAGACCTATCGAATGAGAACATCATAATGTTCCACCCC
AGAGTAACTTGTGTTTTGAATCTATCAAAGCAATTAAAACACTAGAAATC
TTCAAATCCCACGATATCCAAAAACTCGAGAACACGCAAGCAAATTGANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGTTATTAACACTTAGTTAATTGGCATAATTAGTGAGATTAGATAT
AAATTGATCATTTTTCCGATTTCATTTTTAGGGCCTGTCTTCTTTGGAAT
CAAGATGCAAGAAGATGGGGCAAGAAACGAAGACTTTTTATAAGAACAAA
AAAACTCATCAACCATCAAGCATTTGCTTTGCGTTTGTTTTTTTTACCAA
AGCTGTGAAGGTCACATGTCAGAAGGATAAGCAAGCAATAGAAGAACATA
ATAATCTGCACAACACTCTTGTATAACAGAACCCGGTGGGGACCTACAGC
GGGAAATTTCTATTGCAAAATATCTTAACGGGGAAGAAAATTTTGGGTTT
TAAATGGTCGGGGAAAAATTGCGACGGCGTGTACTTTTGTTAACTCTTCG
AAATTTTCATCATTTCCCCCCAAATTTTTCAAGTTTATCCCCTTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCCCCTTTCTCAGTGACCCAGTGAAGTTTTGAAACCCAC
CGGGTCTTAATATAGGATCTCCAAAGCTCAAAAGTGATAACCTTTAACTT
CCGCTGGTAGGGAAAAATTGACTTTCAACTAATGTTCAAGAATTCTTAAA
AAAACTGAGATTGACCGGGGTAAGACGGTAAGACCATAAATAAGATCTTT
GATTTGGGCTCTATGCAATTTCTTTCACCGGGTAATTCATCATTGAGTGG
AGCTGACCGGGTCACTGATATAGGGGTGTAATAAAAGAATTTGTATATAT
AATCTCCGTGGATACAATCGGGTGCATAGTTCTTCGATGGTGAACAAACG
ATTTTTCTGTCGTGTTTTAGTCAAGCTGACAATTAAGAGTCATGTCTACC
TGAGAACGATCTCGATTATCGGTTCACCCAGTGGTCCCTATAAAATGAAT
GAATTAAAAAAAAATTGTCATGAAACTAATTTTGCAGTATATTCAGGGCT
TCATTAGATTATTGAGCTTATCTTTAGATAGAAGTCAACGACCTTAAATA
GGGGTGTATGACAAAATTATTTTACTAGAAGAAAAGANGTTTTAAAATTC
TCAATTCTCTAAGAAAAAGTACATGCGAAAATTAATCGACTTAGGGTAAT
GATAGCGGTATTCTAAGTCGCGTCATTAAGACAAAAGTGGCGAGAAATTA
AAAAATCCCACTCGCACAAGACAGAGATGTAATGTGTATTCCGACAAGGA
CATGATGTGTATTTCCTTCGTTGTGAGAGGGAGATAGGAAAGCAAAACAT
CACTCGCACACTCGCACACTCGCATGAAACAGGGATGTAATATGGCATAT
TTCCTTTGTTGTAACACAGGGAGGTGCGAGAGGCGGGAGAGCTAAAATAC
CACTCGTGTGATACTGTACGTACCTGATAAAATAATATTTCTTCCCACTA
TTTTACCGAGCTTTTTACGTTGCCTTAATATACATTAATGCTTGTGAGAA
AGCATAAAAAAGCAAGCTTTTATCCCCTATTGATCGTGATATAAAGAGGG
CCTTAGATAATATCCTTGAACTCATTAGCATGTCAATGACCTTCTTAAAG
TAACTCTCACAGGAATCTGCAAAGACGTCATCCTAATAGACGTAATAAAA
AACTTACCATTGTTGAAAGAATAACTTTTTGTAATCACTTGGGAATATAA
TTACTACTTGCATCGTGTTTACGTCANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTCACCGCAGAAATATTTTCAATA
TTTTGCTCAATTTTTCGACTGCAAGTTGTGGGGTAGCAGAAATATATATC
AATGTGTTCCTTATAAGAGCCGCTAAACATATATCGTATTTTTATTTTCA
CCACAACGTGTTATTGAACGTTTTAAGTACTTTTTGTTTTAAGCCTTTGA
TCTTTCTTTTTTTTCTTTTGTTTAGCGTGGCGCTAAATGATGTGATTACT
CATTTTTTTGTCGTTTAAAATATGACAGTGTGCTCGACTGTCTATTCCCA
TATTACTGAATTTTAAAGATCTTCTATGTGGTGTTTTTTTGACAAACTTC
AAAAAACTGATTTACAAAAGCACCCTAGCCTGGGTATCCAGACTCAAAAG
TATTATCAACGTAGTCGTAGTGTCCGAGTTCGATCCCGATGGGTGTCCAA
TTTTTCAATTCTTCAATTTTCTTTTTTTAATTCTCTTTCTATTATAATGA
AGGTCAATCAAATAAGTAACTAGCATATATTACCTCCGCTCTCTTTCTAA
GGTTTAGATAAGCTATGATAGCATCACTTAATAAGAACTTCTTAAAGTTT
TTTTTTCTTCAATCTTTCTTTTGCCACAAGCAATTATTCAAGGCTGAGAT
ATAGAAGAACAGGTATAGGCGTTTGCGCCTGTGTTTGCTGACTGACAGTT
TCAGTTTCACTTTCACTTATCAGCCAGCGAGTGAGCGAGCGATTCTTTGT
AAGAAAATTGTCAAATAGCTTCTTTCAGAATCATTGAACTTCTCATTTTA
TACTTTAAAGGCAGAATAATAATTGATTTCCGGGTCAAAATGTTTGGCAC
TTGATACAATTGTTTGCTTATGTTTCTTGTGTGGTCGTTATTTGAATTTC
AGTATTAAATGGTTATAAAATACGGTTGTTATAAGAGTATTAAACTCCTC
ACTAGGAGGGAACAGATCATAGATTCGAATTGAACGCGTAATTACTAATA
GCATTTAACATTACATAATGTGTTGATATCTCTTCACTCTAATGAAAATG
TGATACAAAATTTAAATCACAAAAAAAAATCAAGAATTGAAAAAATTGGA
TATCCATTGGAATCGAACTCCGAGCCCCATGCTTATGAGACAGACGATCT
AACTGCTTGAGCTAACCGCTTTGAAATTAGTAAGAGAAAGGGTGAACTGA
TAAGAAAGAGAAAGGAAAGAAAGAATCGAGAAGAAAATTAATTCCCGCTT
TTGATGTTATTATCGAAACAAAAGGATCAGTCATGCCGAAATTCCTTTTG
TTGACAGAATCTCAAAACTTTGGAAACCCAGACAGACACACATAATTACT
TACCATAAAACTCTTTTACATACTCAAAAGCCTTTCAAAACTACTTTAAT
TTACATCCAAACGTCAGTCACATTCATAAGGCTCCTTTCTATCAGCCATT
TTGTTTAGAAATGAACCTGTGTTTTCATTTTCATTTGTTTATATTTTAAA
TTAACTTGTCCATTTAATTGCATCATAGTCATTATAGAAATCCCTGGTCT
GGAAGGCTTTCTTTCTATTGTTCACAGTTAGAGTTTATACCTAAAAGGAT
TTGTTTTGCTAGTTTTTATCATATGACTAGAAGATATACCAATCTCAAGA
GTAAAAAATAACACGAAAAAAGTAACGTGATCAAAAAATATGCAAATTGC
AAATTGCCTTTTATTTACAACAAAAGAAATTTTAAGCAATAAAGCCAAAA
CAGTACAATACCAGACCAGGGTTTTTTATAATGACTACAGTCTATCAAGA
AAGCTTTTAAGTGAACCCTGGGCCAGGCTAGGCTAGGCATTATCCATTTT
ATACTTAAAAGTTAATTGAATGGTAGCAATTAACAATAATCTCTATGTTA
TTGTTTCTTTCTTGTTTTCATAGTCAATAAGAAGATATGTGCTGCATTCT
TTCAATGAATTTGAAAGGATTCTTTCATGATTTTAACCCCAGGTAAATAG
TATGATTCCTTCACTACTTATGATTGTTTAATGATGTTATTATGAATTGT
TGGTAATATTTTTTGTGGAAAAACTGTAAGAATTCTCTAAATTCTGTAAT
ACAATGGTAAAAACTGGTTAAAACCAGAACAAACATATCTAATGCATATT
TAAATACTTATTATTGTAAGAAAAATGTGTTTTTTATAGAAAAAATCATA
TTTTTTTCAAACCAAGGAAAGTAATTCCCTAAAACTTTTCAACCACAATG
ATTATATACTTTTAGCTTAAAAATTTATATGAATGGATAATTGCCCCAAG
ACAATTTCCCCCAGGCCCCCTAAACAATGTCATTACTTTTGCCCCCGTCC
CCTCTCAAATATCTTTAAATCATTAAAGGGCAACTGTCCTATCAGTATCA
CCGCATAAATTATTGACAATACTTGCAATTTTCTCCGTAATTTTTTTTAA
CTTTATCATTTTTTTGTTGCCTCTTTGTAGTAAATGTGTTGTGTACTTTG
CATTACTGATCTTCTCGATATTACTTGGCTTGCGTCTTGATGAAGTTGTG
ACATGGAATTTCTTTATTGTGTTCATTCCACTATGGCTTTGGAAATTGTT
GGTATTTTCTGGCGTCACTGTCGGAGCAATTGTATGGGTCAAACATCCTG
AATACAGGTAGGATTATTTGTCTTTTTTTATCTCGATCATTATAAACCTT
GAATCTGGTTTCCTGTTATATCCTAGTCCTTATTAAGGGATTGAAAAATG
CGCAAATATTTAGAGGGTAATTTACAAAAGAATTCCTCTTAGAGTCATGA
TTCAGAGGTCCAGGTACATTCTGTGGTACAGCAGTAAGTCATTTGCTGTT
CCAATAACTTTCTAGCATTTGAATGAAAATCCTTCTTTAGATTTTCAATC
TGAATCTAGGTTTTTTCCATCAAGCCAGGCCCCCGTCTCAAAATCTCTAC
TCGCCAAACAATACTGATTAGTGAATTTGATGTTTCCTTATTGACCTGTA
TAATTTTATCTGAAAGATGTCTCTGTTTTTGAAGACTTCTTTGTATCTGT
ATTTTTTATATTATACCTTAGAAGAGAGACCAATGTAGAGTTACAAGCCA
TGATGATAGCATCATGTTTCCACCTCTTGTTGATGTTATTCGAAGTTTTG
ATGTGCATGAATCTTCAATATAGCATCGCATCATACCGTGTGGTGTTTAT
TCCAATGTATTTCATGTCTTTTATGGCCATTGTTGGTTGTGTTTGGGGAT
ATCGCCATGAAAGACAACTTGAAGTAAGTCAGCTTATTGTATTATCACTG
TTCGTAAATGCAATGAATGACGATGTCGTCAGTAACAATTTAGATCATTC
TGGAATTTCGAAAATTGAAAAGAATATTTTTGTAAATTTTTTGCAGCTTT
TTGATACCTTTAAAATCCTCGAAAATTATTCATATTTCGGGGAAGTTTGC
ATCTATGGTGGACTGAAAAACACTTCGAAAAATACTTATTTTTTTATTTT
TTTTTATTTTATTTATTTGATAAAGCAGGTTAAAAAACGCAGACTAAGCT
GATGTGGACCTGCAACTAAGGACTATATTACAAATGAAAAATAGTTAAAA
TGTATTAAAATTATGTATATGCTGTAAATAGAGATAAAAGAATTATTAGT
GCAGAGATTTCTGAAGGATAGTTAACCAGAGAAAAAAGTAAGCTTGATAA
GCTTATGTGGCTTAAGTGAGATTTAGTTTGTTATAGGAGTTGATTAGAAC
TAGACTTGAGCTAACCTAATGTAACCTATGAGTCATAAAAACCTACGCAT
GTGCAATATAAAATTAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTC
TTTTACCTATAACTTTTGAAAGAATTCTTTAATCTTTATAAATTTGGTAT
CATTGGAAAGATATTAGTGAGTGGAACAATTTTAAATAAAAAAATCTTTA
AAAAAATTCTAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTGGATTTTTGGTATCAATTCATCAATAGTATCTGCAGC
ACTGGATTCTGTAGTATCGTCAGCAAACATTTCCGTTTCATCTTGATTCT
CATCCTCAAGAGTATCGTCTGAATTTGTTGCATCTGGAAGGTCATTCGCA
TGGTAGGAATAGCATCTAGGGCCTAAGATGGAGCCCTGTGGAACTCCTTG
CTCTACTGGTTTGATGGTTGATTTACTATTTCCAATTTTAACAAACTGTT
GCCTTTGATACTCTACACTAATACACGTATTCGAGTAATGGTACATTTGT
CACAAATGATGACATGTGGCTTTCCCTATCTACTTCGTTCTATACAAAGC
GTAACAAGCGACGACTTACACAATTCATACAACACTTCCATGACTATTTG
AAACATAACCTCACTTTATTATGAATGCGTGTCATACTATCATACTAAAC
TTACACATCACCCTCTACCATGAAAACATAATACAAAGTGAGTATTACAA
TATACCCCTCAGGTAATGGTAATTGCAGTAATTTCGGTAATCACGGTAAT
CACGCCCTTACGCCACAACATATCGCCCTTTAAAGCGACACACCATAATA
AGAAAATGTATACAATGTACCCCTCAGGCAATGGTAATTGCAGTAATTTC
GGTAATCACGGTAATCACGCCCTTACGCCACAACATATCGCCCTTTATAA
CGCCACACCATAATAAGACAATGTATACAATATACCCCTCAGTCAATGGT
AATTGCAGTAATTTCGGTAATCACGGTAATCACGCCCTTACGCCCCAACA
AATCGCCCTTTATAGCGCCACACCATAATATGACAATGTATACAATATAC
CCCTCAGGCAATGATAATTGCAGTAATTTCGGTAATCACGGTAATCACGC
CCTTACGCCACAACATTATTATTATTATTATTATGATGTATACAAGCTCA
CAGGCCCGAGGTGGACCTCTACGAACCGATTTCTAATTACAATATTAATA
TGTCAAGTATCTTAGTTGATGTTTTTCCCACGCTTTGTTTAGGCTTTCTT
TAAACGATCTGATTGAGGTCGACTCGATGACAAATCGCGGTAGTGCATTC
CATGTTGGGATCGATCTATAGTAGAAAGATTTCGTCTGAGCCCCACGAAA
ACCATCATCAGCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGGATTGAATTTGCTTTGT
TAACCTGTTTGGATATATGCTCCTCGAAAGTTAGTTCCGAATCGATCAAG
ATGCCGAGGTCTTTTTCTTCAAAAACATGTTCAAGCTCATTACCCCCAAG
CTGGTATCGGTGTGCATGCTTGATGTTGGCGAATTTACCTATTGTTAAGA
CATGACATTTATCAGGATGGAACGTGAGTTACCAATCCTGAGACCACTTT
TCCATTTCATCGATATCTCTTTGTACAGCGATAGAGTCTTCAACCGAATC
TATAGTCTTCACTATTTTCGTGTCATCAGCGAAGAGAAATGCATCCGAAA
CTACTTTGTCTGGCAAATCATTGANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
TAAATGACAAATAGCAGAGGTCCAAGTACACTTCCTTGAGGAATCCCACT
TACGACAGGGTTAGTTGTTGATTTGGCTGAGTTGACTTTGACCAGCTGCT
TTGACCATATCGCCCTTTAAAGCGCCACACCATAATAAGACAATGTGATT
GGCCAATTAGGTGACCAGTCATTGACTGATCTGAAGCGTGATTACCGTGA
TTACCGAAATTACTGCAATTACCATTACCTAAGGTGTATATTGTATACAT
TGTCTTATATTATGGTGTGGCGCTATAAAGGGCGATATATTGTGGCGTAA
GCGTGATTACCGTGATTACCGAAATTACTGCAATTACCATTACCTGAGGA
GTATATTGTATACATTGACTTATTATGGTGTGGCGCTTTAAAGGGCGATA
TGTTGTGGCGTAAGGGCGTGATTACCGTGATTACCGAAATTACCATTGCC
TGAGGGGTATATTGTATACATTGTCTTATTATGGTGTGGCGCTATAAAGG
GCGATATGTTGTGGCGTAAGGGCGTGATTACCGTGATTANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNACATGTCATCATTTGTGACAAATGTAA
CATTACTTGAATACGTGTATTAGTGAAGTATTTTTCGAAGTGTTTTTCAG
TCCACCATAGATTGTAACATTGCCATATTTCGGCAATTATTTTAAGTTTC
TTGATACCTTTACCCTTGTTTGGTCTGCAAACTTTTTCATTGAATTATAT
CTTTCGAGATCTCTGCATATTTCTAAATCCTAGATCCATTCTACTTTTTT
TTCAGTTGGAAACGTTTTTTTCGATCAATGTTTTGCAATTTATATGTCTA
TCATTAAAATGGGACAGTGTCATCAGTTGGAGTTGGGTGGTAAGACATTT
CTTTTCGTCCTAAGAGGAATACTAAACTGACTCTCGTCCATGCACTGCAA
AAGACAGAATCCACTAAGAATATTTAAGCTCTAGATAACAGAATAGGAAA
CCCCCTTCCATCAAAACCGGTGATCACCATCAGCATTCCTCTTTAATTAC
CACTGCTCAAAATTCTACTCGGCTCACAGATGAAGAGCCAGAGGTATAAA
ACTCAATATGAAGCTAGTTCCTCTTTAAAGGTTTTAAAACACTGCTTTAA
TACACTTTTAAAAACTTTCGCGAGGTCGAAAAATCGCGAAATCTACGACA
TTTACTTTCGCGAATTTGACAAAAGAAATTTTTCGCAAGCGTAAACTTTA
GCGAATGAGGTATATTTTTAGTAGAAAATTCAAGTTCTCGGTGCATAAAA
CTAGTGTTTTGATCGTTCAAATGATTCAAACCACAATTGATGGACTTTTA
CATAATATATACACTAAATTTTATCCTTGTTATCATCAAAGAGGAAAATT
TGAGTAAATTTTCTTTTCAGATTTCTTTTCACGAGCATAAACTTTCGCGA
ATTACCCTCTCAAGAATTTTCAAAGACTCGCAAAAATCGCGAGAGTTTGT
ACGCCTATAGTAATTTCTGAGATTGCAAGTAGGAGTTTTTGTCATATTTG
GACCCTAAATTGACCATAAACACAATTTTTTGGAGACCTTATTATGTAGC
TTCTCTTCACTTTTATGTTCAGGTAGTGTTTGTACCATTGTGGATCATTT
TGACGTTGTTATCGGTCTGCGTTTTATATTACATCATCTGGGCTTTACTG
TTCATGAGATCACCAGAGATTACCAACACACAGCGCAATGGTCACTTGGT
CAACTCATTCATGTCATGTTTTATTGTTATCCCTCTCCTCACATTCATGG
TGAGTGGCAAAAGCGTCGTTTTATGATCTTGGGAAAACATTAATGATGGA
TAAATGAGCGGATCTTAATACAGCCCAAACTGCCTTCTCTGTTCATGATT
TTTCACAATTCCATTTTTTTCGAATAGTTAATAACCGTATTAACCCTTAA
CTCGGTAACTCTTAACACCCGGTATAAGATAACGTCGCAAAATGGTCTGA
AATATGCAATTTGTTGCCAGAAATAGAGTTTTCTACTGTTGGAAGCCTAA
GTCGCAGGTTTCATAAGTTTAACTGTATTTTTTACCTTTTTTGGCGTAAA
ATTAAAACTGGGCATCTTTGAAATCTCAAATAGTGCATGAATACATAGCA
ATAAGACCGATTTTTTCTAATGTACTTGTACTAATGTACTTAATTTCCAA
TCGCTTGATTTTAGATCATGTTGGTTCGACAATTGGACAGATATTCGGTG
AATGCACATTACACGACCACCTTCATCCCTCTTCAAATCTCATTGGTCAG
CCTCATTGTCACTTCTTTCTATCAAAAAGGCGGCAACCAATGTAAGTGTT
CACACTTTATGCGCTTTATATCTAATATTAGCTTCAAAACGACATACTTA
TATATACGCTTACAGTTAACGCTCTCTAAATCGATTTTCAAGAGGAATAG
AACTTTCATCGAATAAGGTTGCGTATCGAATAGTAGAGCGTCGCTTATGA
TGAGAGTTTTTTGTTACTTTTGATGATGTCGAATTAGAGAGTACCGACTG
TATATAATCGTGAGTTTTTTCAGACCAACAACAGCTTTTCTGATTACTCA
AAGTTCAAAGATCACTTCTATTGAAAATTCTATTGCAAAAACGTTGATTA
GGTCATTGAATGAAAGTCTAGAAAAAACAGCTCGCCATACAAATCGGACG
CTTTCTACATGGTTTGACGATGAAAATTTGTTTTTCCTTTTTCGCCGATT
ACTATAGCAAAAGAAATTCTTAACGCAATGATACTAAATTGATTCTTGTA
AAACTGTCAGAAATCGAGTAAAATCAAGATAAAGTTATGATTTTCTCGAG
CTCTAGCTTTTCATATAATGGCGCGGCCATGATACGGTTATATCAGTAGA
ATCGCGAGGTAATTCTGAGCAAGAAGATATAAGTACCTTTTCGTATAGGT
GAGGTGTACCCAAAATACAAGCCCTAAAAGTTTGCGCATAATCACATCAG
GCCTGAAACAAAAGAATTTGTCACAACACGCTTAAAGCGACAACAAAAGA
AACCTATTAACTCAACATAAACTCCCTTAAGGGCAAGAGACCTGGTATAT
GGCGAGCCGTTTTTCCATTGTTTTCAAGAAACTGTTTTTCCATCTCTTTA
CATTCCTCTGAACTAAATAAAGTCTACCATAAAGTTTACCACAACATCTT
GTTTTCTTTCTTGAATTTTTACTAAAAAATCAGAAAGATGTCTATATTTG
GACTTTGCTGCTTATTAAATAAAGTCTAAACTGTCTTTATCTTTCCCCGT
AGGGTGGTTTGGAATGCGAAAAGATTTTTGTGAGTTTCTACTGGACGCGA
TACCGTTCTTACGAGAATACGGAAATATTTCGTACAAATTTTCGGATACT
GTTGTAGCGGACGCTAATGAGAGTGATGGGAGTAGTTCTTCTATTGAACT
TTCGAACACGCAAGAATCGTCGAAAATACGTGAAGCGAATAAACCAGTAG
CTTCTGTACTGGTGCTTGATATCCCTGATTGATGTTTGCATGTAATGCGT
TCAGAGAAACAAATGGAAGGAAGTTGGTGAAAATGCGTTCATAGGTTTAC
CGCAAATAATCGGTTTTGCATACGCATCACGATAACCCCACAGGGTTTTT
TAGCTGTGTTTTCACACACATATACAGAGTCAAAACAATGATACGGAAAG
TATATAAACTTGTTTTGAGGTATTGGTTGAGAGGCACTGTAGATATAAAG
CCGAGAAACAATTCGTAAATTCACAATCCATTGACGTGAATTTATTAATT
ATTTTATTTATCGACAATGTACGGCTTTAAAAAATCTTCTCTGAAGTTAA
AAAAAACGGAAAGCCAAAATCGAGTCTGTTTTCTTTTATACCATGAACAT
ATAAACGACTGGACATCCATCTCCTTTGTCTTTTTGTAGAAAAGGCTGCT
AGCTTCGTTGCCGCCTCGTTAAAAGCATAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004458XLOC_004458Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007869-exon-sc0000080-1575043694:70638..70670TCONS_00007869-exon-sc0000080-1575043694:70638..70670Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1575043694:64079..64147TCONS_00007869-exon-sc0000080-1575043694:64079..64147Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1575043694:63414..63590TCONS_00007869-exon-sc0000080-1575043694:63414..63590Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1575043694:62798..62996TCONS_00007869-exon-sc0000080-1575043694:62798..62996Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1575043694:54682..54765TCONS_00007869-exon-sc0000080-1575043694:54682..54765Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1575043694:53772..53948TCONS_00007869-exon-sc0000080-1575043694:53772..53948Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1575043694:53230..53356TCONS_00007869-exon-sc0000080-1575043694:53230..53356Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1575043694:51586..52268TCONS_00007869-exon-sc0000080-1575043694:51586..52268Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1510915933:70638..70670TCONS_00007869-exon-sc0000080-1510915933:70638..70670Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1510915933:64079..64147TCONS_00007869-exon-sc0000080-1510915933:64079..64147Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1510915933:63414..63590TCONS_00007869-exon-sc0000080-1510915933:63414..63590Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1510915933:62798..62996TCONS_00007869-exon-sc0000080-1510915933:62798..62996Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1510915933:54682..54765TCONS_00007869-exon-sc0000080-1510915933:54682..54765Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1510915933:53772..53948TCONS_00007869-exon-sc0000080-1510915933:53772..53948Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1510915933:53230..53356TCONS_00007869-exon-sc0000080-1510915933:53230..53356Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1510915933:51586..52268TCONS_00007869-exon-sc0000080-1510915933:51586..52268Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1491911889:70638..70670TCONS_00007869-exon-sc0000080-1491911889:70638..70670Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1491911889:64079..64147TCONS_00007869-exon-sc0000080-1491911889:64079..64147Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1491911889:63414..63590TCONS_00007869-exon-sc0000080-1491911889:63414..63590Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1491911889:62798..62996TCONS_00007869-exon-sc0000080-1491911889:62798..62996Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1491911889:54682..54765TCONS_00007869-exon-sc0000080-1491911889:54682..54765Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1491911889:53772..53948TCONS_00007869-exon-sc0000080-1491911889:53772..53948Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1491911889:53230..53356TCONS_00007869-exon-sc0000080-1491911889:53230..53356Clytia hemisphaericaexon
TCONS_00007869-exon-sc0000080-1491911889:51586..52268TCONS_00007869-exon-sc0000080-1491911889:51586..52268Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:51586..70670 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.26662	0	1.87772	0	1.95279	1.30804	0.0115601	9.42954e-06	0.000152207	0.553055	6.25258e-10	0.882112	0	0.858484	0.076779	0	2.47004	1.96385	0	0.675538	8.20567e-05	0	1.11337	2.02397	0	0	0.00086022	1.66775	1.10309
Blast
[Close]
BLAST of TCONS_00007869 vs. Swiss-Prot (Human)
Match: T185B (Transmembrane protein 185B OS=Homo sapiens GN=TMEM185B PE=1 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 6.631e-93
Identity = 163/351 (46.44%), Postives = 240/351 (68.38%), Query Frame = 2 
Query:   65 MNLKGFFHDFNPSKCVVYFAXXXXXXXXXXXXDEVVTWNFFIVFIPLWLWKLLVFSGVTVGAIVWVKHPEYR---ETNVELQAMMIASCFHLLLMLFEVLMCMNLQYSIASYRVVFIPMYFMSFMAIVGCVWGYRHERQLELETFFSINVLQFICLSLKXXXXXXXXXXXXXXPLWIILTLLSVCVLYYIIWALLFMRSPEITNTQRNGHLVNSFMSCFIVIPLLTFMIMLVRQLDRYSVNAHYTTTFIPLQISLVSLIVTSFYQKGGNQWWFGMRKDFCEFLLDAIPFLREYGNISYKFSDTVVADANEXXXXXXXXXXXNTQESSKIREANKPVASV-----LVLDIPD 1093
            MN +G F DFNPSK ++Y  LL+FS+LL LRLD ++ W+++ VF P+WLWKLLV +G +VGA VW ++P YR   E  VE +AM+IA   HLLL++FEVL+C  ++     + +VF+P++F+S +++  CVWG+RH+R LELE   S+N+LQFI ++LK D +I W W+VVFVPLWI+++ L + VLYYI+W+LLF+RS ++   QR  H+  +     IV+PLLTF ++LV +LD ++  + Y + F+PL +SL++L+ T+F +KGGN WWFG+R+DFC+FLL+  PFLREYGNISY        DA E+    +        + +++     P   V     L +D+PD
Sbjct:    1 MNPRGLFQDFNPSKFLIYTCLLLFSVLLPLRLDGIIQWSYWAVFAPIWLWKLLVVAGASVGAGVWARNPRYRTEGEACVEFKAMLIAVGIHLLLLMFEVLVCDRVERGTHFWLLVFMPLFFVSPVSVAACVWGFRHDRSLELEILCSVNILQFIFIALKLDRIIHWPWLVVFVPLWILMSFLCLVVLYYIVWSLLFLRSLDVVAEQRRTHVTMAISWITIVVPLLTFEVLLVHRLDGHNTFS-YVSIFVPLWLSLLTLMATTFRRKGGNHWWFGIRRDFCQFLLEIFPFLREYGNISYDLHHEDSEDAEETSVPEAPKIAPIFGKKARVVITQSPGKYVPPPPKLNIDMPD 350
The following BLAST results are available for this feature:
BLAST of TCONS_00007869 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
T185B6.631e-9346.44Transmembrane protein 185B OS=Homo sapiens GN=TMEM... [more]
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