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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007850 ID=TCONS_00007850|Name=TCONS_00007850|organism=Clytia hemisphaerica|type=transcript|length=1095bp
gccggaaaaactggttttttggtattttctcgagattttatcattagttt
tttctgattttttgctcaaagatgcgtatgaacaatgctcaaaacatgac
cgagtccgatttttgagaaaatgccgaaaatgccggaaatatgccggaaa
tcgccgtttttctggattttcattggactttttccttataattggttgtt
ttttcattcaaaaacattattaaNTTCAAAGTAAAGGACGTTCCTGATCT
GCTACCCTCCACTGCTGATAGGAGTGATTATTTTTAAGCCCAAAAACAGT
CAATGAACCATTCATCACGCATAGTAACACCATTCATTCAGCAAATCTAT
TCATGTCATCTTCATTTTATCCCTCCCTGTGGATTGCAATTGGTTgctct
tttttatataattcaACAAATCATTCATGTTTAAATTTGGGATAACACTT
TTGATTGCTCCGTATGGTGCTGCTATCATCAAAACATTTAATCTTCAAAA
TAATgattataatttaaattttgcaaattggttaaaaaaaattatgctaA
CTTTAAGACATCCGGGTCAGGTACTTATGAGTGCACTGGTCTTGTATGGC
GATTTCAGGTCAGTAAACTTTCAATAATCAACTTTTTGCTAGCAAGATAA
TGgttaagaaaaattttgttgaattttgattgcCATCcgataataatttt
tctttctaatGTCTTAGACGGCTCTCAGTGAGACGGGAGGACCTAAATTT
TGCACTCCTGGTGCTTTTAAAATGAGAAAGATTTTAATATGTATTATAAA
GGATAGGAAAACTAACTACACACGGTAATATTTTTATTCGATAATTTTTA
TGACATTTCATTGACCTCTTAAAGAGGAGAATGACGAATGAAAGAAAGGT
AGGGCTATAAGATGTTatagatatttcatttttttatataattttccaTT
TCTAATCTAAGGGTATCTTAGGCAATTTGTAAGTAGAGTTTTAATTTACT
AAAAGGCATTTTTGTAGAGAAATATTCTttcagattttatcaaaactatt
tTCCAATTGTTCCCAGAATGCTTGCGCTATTTGACTCAAAACTTT Run BLAST on NCBI transcript from alignment at sc0000080:622926..624020+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007850 ID=TCONS_00007850|Name=TCONS_00007850|organism=Clytia hemisphaerica|type=transcript|length=1095bp|location=Sequence derived from alignment at sc0000080:622926..624020+ (Clytia hemisphaerica)
gccggaaaaactggttttttggtattttctcgagattttatcattagttt
tttctgattttttgctcaaagatgcgtatgaacaatgctcaaaacatgac
cgagtccgatttttgagaaaatgccgaaaatgccggaaatatgccggaaa
tcgccgtttttctggattttcattggactttttccttataattggttgtt
ttttcattcaaaaacattattaaNTTCAAAGTAAAGGACGTTCCTGATCT
GCTACCCTCCACTGCTGATAGGAGTGATTATTTTTAAGCCCAAAAACAGT
CAATGAACCATTCATCACGCATAGTAACACCATTCATTCAGCAAATCTAT
TCATGTCATCTTCATTTTATCCCTCCCTGTGGATTGCAATTGGTTgctct
tttttatataattcaACAAATCATTCATGTTTAAATTTGGGATAACACTT
TTGATTGCTCCGTATGGTGCTGCTATCATCAAAACATTTAATCTTCAAAA
TAATgattataatttaaattttgcaaattggttaaaaaaaattatgctaA
CTTTAAGACATCCGGGTCAGGTACTTATGAGTGCACTGGTCTTGTATGGC
GATTTCAGGTCAGTAAACTTTCAATAATCAACTTTTTGCTAGCAAGATAA
TGgttaagaaaaattttgttgaattttgattgcCATCcgataataatttt
tctttctaatGTCTTAGACGGCTCTCAGTGAGACGGGAGGACCTAAATTT
TGCACTCCTGGTGCTTTTAAAATGAGAAAGATTTTAATATGTATTATAAA
GGATAGGAAAACTAACTACACACGGTAATATTTTTATTCGATAATTTTTA
TGACATTTCATTGACCTCTTAAAGAGGAGAATGACGAATGAAAGAAAGGT
AGGGCTATAAGATGTTatagatatttcatttttttatataattttccaTT
TCTAATCTAAGGGTATCTTAGGCAATTTGTAAGTAGAGTTTTAATTTACT
AAAAGGCATTTTTGTAGAGAAATATTCTttcagattttatcaaaactatt
tTCCAATTGTTCCCAGAATGCTTGCGCTATTTGACTCAAAACTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007850-exon-sc0000080-1491911889:622926..624020 | TCONS_00007850-exon-sc0000080-1491911889:622926..624020 | Clytia hemisphaerica | exon |
| TCONS_00007850-exon-sc0000080-1510915933:622926..624020 | TCONS_00007850-exon-sc0000080-1510915933:622926..624020 | Clytia hemisphaerica | exon |
| TCONS_00007850-exon-sc0000080-1575043694:622926..624020 | TCONS_00007850-exon-sc0000080-1575043694:622926..624020 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080 | supercontig | sc0000080:622926..624020 + |
Blast
The following BLAST results are available for this feature:
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