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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007764 ID=TCONS_00007764|Name=TCONS_00007764|organism=Clytia hemisphaerica|type=transcript|length=3106bp
ctagTAGTTTACCCTTTCAGTCTCTAACAAGGAACTAACTTCACCGGGCT
ATATTTCGGATACTGAAAGATTTCCGGaacataaaattttgatgaaaata
ggTTGGGTTTGGGGCGCTCTTACCCTTTATCTGTTGTCTTGATGACGCAA
GATGTACAAAAAGTGCAAAGCTCTGCGACGtgaaagggttaaaaatcaat
ATATTGTGTCAGGAAGTCGATTTGGTCTTTAAATATACTACGACTAATCa
tttaacaaataaaaattttcatatattctttttttctcgaaaaacaCCAT
ACAcatgtcccgaaaaaagtccCGTGACAGAACACGACTAAAGTGTGTGT
GTATGTTACGTTAGCTTCTTTCTTTAAACGCAACACggtaatacactctt
ctcgagatgcataaatttattgctgtcctcgttttcaaacagatttcatt
gctatgaaattatacatttaaaccaatttaaattcccaaaaggcaaacat
taactctaaaacaaaagtacttgaaattcaaaatgtctcatgaggtgtaa
ccaacacaattatcattgtgaatatgtaattttatagcaatgaaatctgt
ttgaaaacgaggataacaataaatttatgcatctcgagaagagtgtatta
acACTATTAAATGGTTACAATGAAAcagccccttctcacagacctggtag
gattttttcagccagtggggataaaaataacggactgaaactcaatgggg
attgatattcccatattttttatgacagggatttcaattcttttgttttc
aagtgaaaattcagtggggatgggaaaatagcataatgttttacagtgag
gattggtttattttattattacagtggggacaaaaatttaatgataattt
tccaccggggacgatattttggccaattttcccagtgggaagggggtccc
agtgggtctctGAGAAGGAGGTTATTGAAACAGAAACGCAATGAATTTAT
CAGGGTCTAATATTCCTCTCCTAACAAGATCGTGTAGATAGCGGACGTAA
AACGTCTAGTGgaatttgaaatagttttaaTCTATAAATATCTACCACAT
CATAAGGTAATTGGGATTAACATAGATACAACAATTATAGATAGATAATT
ATACTTTCGATTTGTCTTTTTAGTTAACAGAATATACGAACGTGTCGGAA
TGTCGGAAACAGAAGAAACAACAGTTCAACAAAAAGGAAATAACATCAAA
CAGGCGGTTGCAGGAATAAGTAAAGAACTACCAAATATTATTGACCAACA
CCTAAGAAACAGAGAGGATGATTTTTTATCCACCCATGCATCAAATAAAA
TGAGTTTTCCGAGGATAATGGAGAAGGGGACGTCAGTACCCTGGGACATG
AACATACTGGAGACGCAAGTGCTCTATCATATAGACAAAGGGACACAAGT
gcatcaaaattagaaatggaCGCAAGTCCCAAAGACTTTGATAGGGTCAG
TTCCCTTTTCGGTATTGGAGACACTCGCATGAGGAAGCATTCACCGCCCA
ATCTTGTCGTCAGCAACGAGCTCCTTCACTTTATAGAGGAGGGTTTAGGT
ATGGAAAAGGAGTCTGGCAAAGCAATAAATGCCAGATGGGCTGAGCAAGT
ACTCCACTCATATATTGAAGCATCATCTGAGTCGACAGCATTAAATAAGA
TCATGAAACTCTACCCTAGACCTGAAAACTTGGCCATTAAAGTTCCAAAG
CTCAACAGGGAAGTTGAGCTAAACGTTAGCCATAATGACTCCCTAAAAAA
GGATATACCTAAATTCCCACAGAACTTTAGTAGCATATTTTGTTTCAGCA
CTTAACAAGAAGGTTGTTCAAAACAAGAAGATTTCATTCTATTAGAAGAG
AAAGTAAAAGAAAGCCAAACAAAGGAGCTGTTCGAACAGCAGCCTGGTTG
GATCCTGACTTATTTACGGTTCCGATTGATATGTCAAGGAAAAGTCGTTC
TGCAAATTAATTTGAGGATAAGATTTTCGCGTGCTAATAAAAATGGTAGC
TTTTTCCGAACTCATCACACGCCTTTAAATGGTTAAGTATGGATCAAATT
TCAAGCTTATTTACTTGGGACAAAAACAAGAAGAATCAACGATAACATCA
GAAACGCCTTGATTGAGACTAAGGAAGGCAACAACcaacaagaaaaagaa
agcaaatgGCATCgacctttccaaaagaaaaaaatatgccaAGTCCAGAA
GCTAATTAGACACAGGAAAAACGTTCACTTTTGCAAGAGCAGCAGCAGAT
TACTTCCAAAACTTGGCCTCGAGAAGAGCCCAATTTAATATATAAAAAGG
TCCAGCCCTCGGGGCATACAAATGCAAACCACACTTATACTTGTCCAAAT
CGTACAAAAATTAGACTCCATAGAGACAAAAAGAAAACAGGACTAAAAGG
ACCTACATAAGAGACTAAATGCATCAACTGAACAAATTAGTAAGAAGcag
acaaacaaaaaacaatatgCATTTCTgtacaaatcaaatcaaatacaaaa
tgaaCTTTAAGATGAGCTTGACACCCTAAATGAAGAGGCCAAAGTCTGCT
CATGTTGGGCTCCAGGAAAAGGATAATCAAGTGTCACTTCAAAAGGAAAG
AAGTGGAAGGAGGAAACAGAAAAAGCACATAAAGAGAAAATTAAACCAAA
CCAATTAAATGTTCTAGTGGAGTTTCTGATGAATCCAGACAGCTGCATTC
ATTATATGCAACCTTGTTAAGATATTGATTGCAACACCATGCAACAACTC
TGGTGTAGAGAAAAGCACTCGGGATTCCAtcaaaaatagagaatttgaat
aaTAGGCCTTTTGTTGAAATAGAGAATTCTAGCCAATCACTTCACGGGAA
TTCTCTATTTTCTCTATTTTCCTACAAAAGAATTCTCtatttctctattt
tgatcaatcaaattgctttattttgaaatcCCGCGTTTTGATTGGTTCAC
GGCAAAatttagtctagcaagctagacgactaattcagacatattagaaa
taaagcaaaaaagtaaattttagtcgtctagaaacctttgtgcactaact
ccaaac Run BLAST on NCBI transcript from alignment at sc0000079:292392..295497 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007764 ID=TCONS_00007764|Name=TCONS_00007764|organism=Clytia hemisphaerica|type=transcript|length=3106bp|location=Sequence derived from alignment at sc0000079:292392..295497 (Clytia hemisphaerica)
gtttggagttagtgcacaaaggtttctagacgactaaaatttactttttt
gctttatttctaatatgtctgaattagtcgtctagcttgctagactaaat
TTTGCCGTGAACCAATCAAAACGCGGgatttcaaaataaagcaatttgat
tgatcaaaatagagaaataGAGAATTCTTTTGTAGGAAAATAGAGAAAAT
AGAGAATTCCCGTGAAGTGATTGGCTAGAATTCTCTATTTCAACAAAAGG
CCTAttattcaaattctctatttttgaTGGAATCCCGAGTGCTTTTCTCT
ACACCAGAGTTGTTGCATGGTGTTGCAATCAATATCTTAACAAGGTTGCA
TATAATGAATGCAGCTGTCTGGATTCATCAGAAACTCCACTAGAACATTT
AATTGGTTTGGTTTAATTTTCTCTTTATGTGCTTTTTCTGTTTCCTCCTT
CCACTTCTTTCCTTTTGAAGTGACACTTGATTATCCTTTTCCTGGAGCCC
AACATGAGCAGACTTTGGCCTCTTCATTTAGGGTGTCAAGCTCATCTTAA
AGttcattttgtatttgatttgatttgtacAGAAATGcatattgtttttt
gtttgtctgCTTCTTACTAATTTGTTCAGTTGATGCATTTAGTCTCTTAT
GTAGGTCCTTTTAGTCCTGTTTTCTTTTTGTCTCTATGGAGTCTAATTTT
TGTACGATTTGGACAAGTATAAGTGTGGTTTGCATTTGTATGCCCCGAGG
GCTGGACCTTTTTATATATTAAATTGGGCTCTTCTCGAGGCCAAGTTTTG
GAAGTAATCTGCTGCTGCTCTTGCAAAAGTGAACGTTTTTCCTGTGTCTA
ATTAGCTTCTGGACTtggcatatttttttcttttggaaaggtcGATGCca
tttgctttctttttcttgttgGTTGTTGCCTTCCTTAGTCTCAATCAAGG
CGTTTCTGATGTTATCGTTGATTCTTCTTGTTTTTGTCCCAAGTAAATAA
GCTTGAAATTTGATCCATACTTAACCATTTAAAGGCGTGTGATGAGTTCG
GAAAAAGCTACCATTTTTATTAGCACGCGAAAATCTTATCCTCAAATTAA
TTTGCAGAACGACTTTTCCTTGACATATCAATCGGAACCGTAAATAAGTC
AGGATCCAACCAGGCTGCTGTTCGAACAGCTCCTTTGTTTGGCTTTCTTT
TACTTTCTCTTCTAATAGAATGAAATCTTCTTGTTTTGAACAACCTTCTT
GTTAAGTGCTGAAACAAAATATGCTACTAAAGTTCTGTGGGAATTTAGGT
ATATCCTTTTTTAGGGAGTCATTATGGCTAACGTTTAGCTCAACTTCCCT
GTTGAGCTTTGGAACTTTAATGGCCAAGTTTTCAGGTCTAGGGTAGAGTT
TCATGATCTTATTTAATGCTGTCGACTCAGATGATGCTTCAATATATGAG
TGGAGTACTTGCTCAGCCCATCTGGCATTTATTGCTTTGCCAGACTCCTT
TTCCATACCTAAACCCTCCTCTATAAAGTGAAGGAGCTCGTTGCTGACGA
CAAGATTGGGCGGTGAATGCTTCCTCATGCGAGTGTCTCCAATACCGAAA
AGGGAACTGACCCTATCAAAGTCTTTGGGACTTGCGtccatttctaattt
tgatgcACTTGTGTCCCTTTGTCTATATGATAGAGCACTTGCGTCTCCAG
TATGTTCATGTCCCAGGGTACTGACGTCCCCTTCTCCATTATCCTCGGAA
AACTCATTTTATTTGATGCATGGGTGGATAAAAAATCATCCTCTCTGTTT
CTTAGGTGTTGGTCAATAATATTTGGTAGTTCTTTACTTATTCCTGCAAC
CGCCTGTTTGATGTTATTTCCTTTTTGTTGAACTGTTGTTTCTTCTGTTT
CCGACATTCCGACACGTTCGTATATTCTGTTAACTAAAAAGACAAATCGA
AAGTATAATTATCTATCTATAATTGTTGTATCTATGTTAATCCCAATTAC
CTTATGATGTGGTAGATATTTATAGAttaaaactatttcaaattcCACTA
GACGTTTTACGTCCGCTATCTACACGATCTTGTTAGGAGAGGAATATTAG
ACCCTGATAAATTCATTGCGTTTCTGTTTCAATAACCTCCTTCTCagaga
cccactgggacccccttcccactgggaaaattggccaaaatatcgtcccc
ggtggaaaattatcattaaatttttgtccccactgtaataataaaataaa
ccaatcctcactgtaaaacattatgctattttcccatccccactgaattt
tcacttgaaaacaaaagaattgaaatccctgtcataaaaaatatgggaat
atcaatccccattgagtttcagtccgttatttttatccccactggctgaa
aaaatcctaccaggtctgtgagaaggggctgTTTCATTGTAACCATTTAA
TAGTgttaatacactcttctcgagatgcataaatttattgttatcctcgt
tttcaaacagatttcattgctataaaattacatattcacaatgataattg
tgttggttacacctcatgagacattttgaatttcaagtacttttgtttta
gagttaatgtttgccttttgggaatttaaattggtttaaatgtataattt
catagcaatgaaatctgtttgaaaacgaggacagcaataaatttatgcat
ctcgagaagagtgtattaccGTGTTGCGTTTAAAGAAAGAAGCTAACGTA
ACATACACACACACTTTAGTCGTGTTCTGTCACGggacttttttcgggac
atgTGTATGGtgtttttcgagaaaaaaagaatatatgaaaatttttattt
gttaaatGATTAGTCGTAGTATATTTAAAGACCAAATCGACTTCCTGACA
CAATATattgatttttaaccctttcaCGTCGCAGAGCTTTGCACTTTTTG
TACATCTTGCGTCATCAAGACAACAGATAAAGGGTAAGAGCGCCCCAAAC
CCAAcctattttcatcaaaattttatgttCCGGAAATCTTTCAGTATCCG
AAATATAGCCCGGTGAAGTTAGTTCCTTGTTAGAGACTGAAAGGGTAAAC
TActag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007764-exon-sc0000079-1491911889:292392..295497 | TCONS_00007764-exon-sc0000079-1491911889:292392..295497 | Clytia hemisphaerica | exon |
| TCONS_00007764-exon-sc0000079-1510915933:292392..295497 | TCONS_00007764-exon-sc0000079-1510915933:292392..295497 | Clytia hemisphaerica | exon |
| TCONS_00007764-exon-sc0000079-1575043694:292392..295497 | TCONS_00007764-exon-sc0000079-1575043694:292392..295497 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079 | supercontig | sc0000079:292392..295497 . |
Blast
The following BLAST results are available for this feature:
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