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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007752 ID=TCONS_00007752|Name=TCONS_00007752|organism=Clytia hemisphaerica|type=transcript|length=995bp
AAAATGCTTTCAGGTATATTGCACTTCCTGTggggaaaaaatctaaataa
agagtATTTAAAAGTTAGCGCAAACACAAAATATAAACAGTTTACAAAAC
ACTTTTGTTGAGGGAAGATCAATCGCAACAGCGTTGATTTCGTTTGAATT
CATCGGAAGGAAACTTATCAGAACCTACGAGTAACTTCTTGTTTTtgaat
actgaatttgaaaatatatgAGAAAATGGGATATATTTTACTGGTAATCT
TCACCATAATAACGCTAGCCATCAACGTGACTAATGGGTCACCGAAGAAT
GATAAATGCAAATATTTCGAACCTTGCAGCGAGAAGAAAGAATGTGGGGA
CTGTGGAGAAATAGTAATGGATTGCTCTGCATCACCTGTGCACCCGAAAC
ATACATGTCAACCACATCATAGCAATAATTTACTCTGGGgtggaaaaaga
agaagaaaaagggaCTTGGCTTCCATGCTACGGACTTACGATGTTATGAA
GGCGTTACAGGTAAAACGACAGAAAAAAATAGATGaaagaaaactggaaa
tttaGACACCAATATGGAGGTTTTGGCataaaaagaagaccaaaaTATCA
AGTGAAGTTACCAGAATACTTAATTAAAAACAACTGGCCTGCAGGATTGA
CGAACTTACAAACACATATTGTAACGATGACGGGGATTCCATTTGACGAT
GCTTATGGTAGTACTGAAAAACATTAACAAAGCCTGCAGAATGAAATCAG
TACTCCATAACCAGATGAGTATCAATGTGCAGCTAGAAATATATACCGTT
CGTATGTAACAACTGGTGGTATCGAGAGGGGTGCTCAAATGGGAAGACGA
AGAGAAGTTATCTGAAATGATATTTACACAAAGAACAACTTTCGAATTAC
CCAGAAGTAGGTTCACGGAGATCTCGAAACTTGGAACTTATTATGCAAGA
GCCATTCACACGTGCTTTCGCGGTGAAATATCAACTAAAAACTTC Run BLAST on NCBI protein sequence of TCONS_00007752-protein >TCONS_00007752-protein ID=TCONS_00007752-protein|Name=TCONS_00007752-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
MGYILLVIFTIITLAINVTNGSPKNDKCKYFEPCSEKKECGDCGEIVMDC
SASPVHPKHTCQPHHSNNLLWGGKRRRKRDLASMLRTYDVMKALQVKRQK
KIDERKLEI Run BLAST on NCBI transcript from alignment at sc0000079:221089..222083 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007752 ID=TCONS_00007752|Name=TCONS_00007752|organism=Clytia hemisphaerica|type=transcript|length=995bp|location=Sequence derived from alignment at sc0000079:221089..222083 (Clytia hemisphaerica)
GAAGTTTTTAGTTGATATTTCACCGCGAAAGCACGTGTGAATGGCTCTTG
CATAATAAGTTCCAAGTTTCGAGATCTCCGTGAACCTACTTCTGGGTAAT
TCGAAAGTTGTTCTTTGTGTAAATATCATTTCAGATAACTTCTCTTCGTC
TTCCCATTTGAGCACCCCTCTCGATACCACCAGTTGTTACATACGAACGG
TATATATTTCTAGCTGCACATTGATACTCATCTGGTTATGGAGTACTGAT
TTCATTCTGCAGGCTTTGTTAATGTTTTTCAGTACTACCATAAGCATCGT
CAAATGGAATCCCCGTCATCGTTACAATATGTGTTTGTAAGTTCGTCAAT
CCTGCAGGCCAGTTGTTTTTAATTAAGTATTCTGGTAACTTCACTTGATA
ttttggtcttctttttatGCCAAAACCTCCATATTGGTGTCtaaatttcc
agttttctttCATCTATTTTTTTCTGTCGTTTTACCTGTAACGCCTTCAT
AACATCGTAAGTCCGTAGCATGGAAGCCAAGtccctttttcttcttcttt
ttccacCCCAGAGTAAATTATTGCTATGATGTGGTTGACATGTATGTTTC
GGGTGCACAGGTGATGCAGAGCAATCCATTACTATTTCTCCACAGTCCCC
ACATTCTTTCTTCTCGCTGCAAGGTTCGAAATATTTGCATTTATCATTCT
TCGGTGACCCATTAGTCACGTTGATGGCTAGCGTTATTATGGTGAAGATT
ACCAGTAAAATATATCCCATTTTCTcatatattttcaaattcagtattca
AAAACAAGAAGTTACTCGTAGGTTCTGATAAGTTTCCTTCCGATGAATTC
AAACGAAATCAACGCTGTTGCGATTGATCTTCCCTCAACAAAAGTGTTTT
GTAAACTGTTTATATTTTGTGTTTGCGCTAACTTTTAAATactctttatt
tagattttttccccACAGGAAGTGCAATATACCTGAAAGCATTTT Coding sequence (CDS) from alignment at sc0000079:221089..222083 >TCONS_00007752 ID=TCONS_00007752|Name=TCONS_00007752|organism=Clytia hemisphaerica|type=CDS|length=330bp|location=Sequence derived from alignment at sc0000079:221089..222083 (Clytia hemisphaerica)
CtaaatttccagttttctttCATCTATTTTTTTCTGTCGTTTTACCTGTA
ACGCCTTCATAACATCGTAAGTCCGTAGCATGGAAGCCAAGtcccttttt
cttcttctttttccacCCCAGAGTAAATTATTGCTATGATGTGGTTGACA
TGTATGTTTCGGGTGCACAGGTGATGCAGAGCAATCCATTACTATTTCTC
CACAGTCCCCACATTCTTTCTTCTCGCTGCAAGGTTCGAAATATTTGCAT
TTATCATTCTTCGGTGACCCATTAGTCACGTTGATGGCTAGCGTTATTAT
GGTGAAGATTACCAGTAAAATATATCCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007752-exon-sc0000079-1491911889:221089..222083 | TCONS_00007752-exon-sc0000079-1491911889:221089..222083 | Clytia hemisphaerica | exon |
| TCONS_00007752-exon-sc0000079-1510915933:221089..222083 | TCONS_00007752-exon-sc0000079-1510915933:221089..222083 | Clytia hemisphaerica | exon |
| TCONS_00007752-exon-sc0000079-1575043694:221089..222083 | TCONS_00007752-exon-sc0000079-1575043694:221089..222083 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079 | supercontig | sc0000079:221089..222083 . |
Blast
The following BLAST results are available for this feature:
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