TCONS_00007735 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007735
Unique NameTCONS_00007735
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2266

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007735 ID=TCONS_00007735|Name=TCONS_00007735|organism=Clytia hemisphaerica|type=transcript|length=2266bp
NNCATAAATTCTTCCAAAGACAATCAACAAAATCGTCTTCACGAGGAGCG
TCCTACATGCAGTGATGGAAGGTGGTTGATGCATCCACGAGCACGACGCT
TCGAAGAGACCTGCACTAGACTACTGCTCCTACTTCTTGTCCTGGATCGT
TACAATATTTGTTGTTTGTCATTGtataaaaagagaaataaaaatgtact
attTTTGGGCATTCTTTGTTGTTGCACTTTGGATTTTATGTCAACTGTCA
GATAAATTCAAATACCATGTGAAGTATGTTGGATATTGTTTGTACTGTAT
CTTTATTGCAGCATGCTCTGGTCTGTTTTGCTTGTTTTACAAGCCAAGGA
GCTCGATGAACATTTTCATTCCTCAGTTCTTTATAAAATGGACTGGTTTT
AAATGGTTGTTTGGTATCAATTTGAAgtatgaaaatttagaaattcttcA
CAATGTGAAAAAACCTTGCGTTGTTGTCTCTAACCATCAAACATCTCTGG
ATGCAATGCTGCTCTTAATTATGTCTCCACTTGGAGTAGCTCCCTTGGCC
AAAAGAGTTTTACTCTATGTGCCTATTTTTGGTCCTGTTTGCTGGCTCTG
TGGGACAATTTATATTGACCGTTCAAAAGGGAGGTCAGCTATTCAAATCA
TGAAGAAGGTTGGCGAAGAGATGAAGAAAAATCTTACTACTCTTTGGATC
TTCCCAGAAGGTAGCCGTTATCAACAGGATAAGTTATTACCTTTCAAGAA
AGGAGCTTTTCATTTGGCTGTACAAGCTGGTGTCCCTATTGCTCCTGTCA
TCTTTGGTAACTACAGAAATGTGATTGAtcggaaaaataagaaatttgat
GGTGGTGAGATCCGATGTATTTGTTTGCCACCCATTAGCACAGAAGGCAA
GACAGTTGATGATGTTAATGATATTGTAGAGAGCACCCATAAGTTAATGA
GTGATGCTTTCGAAAAAGATTTCAAGAGTCATTCTCACATGTACAAGGAT
GTAACACCACTAAAATCTGATTAAAGCTAACAACAGAAAGCAAAGTGCAA
AACAggtatcaaattaaaatttgtgTTGGGTGAGCTTGATTTTAAAAAGG
GCCTTGCCTTAGAGCCCTAATATCAAAATGACCAAGTCCTAGGAACCATT
TGAAGAGAAAAGACAATCTAGAAATAAGTTAGAATAAATCTACGTCAAtc
gatcaaattttaaaaaattcagtaagaagtcgataatttttttagaataC
ATTGACATTGAATTTTTACTTCAACTTTTAAGACCGTTAATTTTTGCATG
CCTTTTATTTTATATTGAAGTTACATGGGTTTGGAGAGGGCAGGCTTAGG
CCCTTTTTAAAATTGCGGGAGAGGCAGACGGACcaattaatttaaaaatt
tacaaagatcCAGATTGTACATGATTattatataatattattttatgATA
TGATTGCTTTTTAATTGCATTAGAATTTTATTCAATTAGAAAATCTAGAA
TTGTGCACACCATTCACTTGTGGATAATAATGATTGCCTTACATTAACAT
GAACTTACAAAACTAGGTCCAGAAAGAAATTGCAGGATTTTTGTCCTTAA
ATATTCTGAATGGCTCGATTGGTGAAATTTCTTCCCCTAAAGTAATTCAG
AATTATTTATTGCAAATGCtagcaaaaattttcaatttttttgccatAGT
TCTAGGTCGGGTTATTGGGGTCGATTTTCAATAATTTAATTTCAGTAAGG
ATAATTTCTTTCTATGCACCTTGTATtatattaaaatgaaattttgttta
cTAGATAGACAAGGCTATGCAAAATCTTCAGCAGGTGTACCATGCAAGCC
TACCAATTTTTTAAAATCGACTAAGAAATGGGAACTGAGACAATAATGTG
CCCCTATTTTTCTATTGAGTGTTACTCAATATCTAAAGCTTCACTCATTC
ATGAAATTTTAGGCTCAGTTTTTGTATCAAGTTGTTTCATCTATCAACCC
CTTTGCTTCTAATGTTGGCCAATGATGCTTTTGTTCTGTCTTTTTAGTCA
ATGTTCTCATCTGTATCTGTATCTGTATCTGTTATTTTGTACTTATTTAa
gtataatttttgattttgattataAATAATAGTATATTTAGTgagttttt
catcaaaaattttatacACTTAGATattgaaataatttaaattGTACTAA
TGATAcgttatcagatttaaaaaatctaagtttagaaattatttaGCCAT
TATAAAACACAGTAtg
Run BLAST on NCBI

protein sequence of TCONS_00007735-protein

>TCONS_00007735-protein ID=TCONS_00007735-protein|Name=TCONS_00007735-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp
MYYFWAFFVVALWILCQLSDKFKYHVKYVGYCLYCIFIAACSGLFCLFYK
PRSSMNIFIPQFFIKWTGFKWLFGINLKYENLEILHNVKKPCVVVSNHQT
SLDAMLLLIMSPLGVAPLAKRVLLYVPIFGPVCWLCGTIYIDRSKGRSAI
QIMKKVGEEMKKNLTTLWIFPEGSRYQQDKLLPFKKGAFHLAVQAGVPIA
PVIFGNYRNVIDRKNKKFDGGEIRCICLPPISTEGKTVDDVNDIVESTHK
LMSDAFEKDFKSHSHMYKDVTPLKSD
Run BLAST on NCBI

transcript from alignment at sc0000079:423174..437708-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007735 ID=TCONS_00007735|Name=TCONS_00007735|organism=Clytia hemisphaerica|type=transcript|length=14535bp|location=Sequence derived from alignment at sc0000079:423174..437708- (Clytia hemisphaerica)
NNCATAAATTCTTCCAAAGACAATCAACAAAATCGTCTTCACGAGGAGCG
TCCTACATGCAGTGATGGAAGGTGGTTGATGCATCCACGAGCACGACGCT
TCGAAGAGACCTGCACTAGACTACTGCTCCTACTTCTTGTCCTGGATCGT
TACAATATTTGTTGTTTGTCATTGGTAAGCTAGCTCTCACTTCTTTCTCT
TTCAATGTTTCAATAGGCTAGTCCCTCAAATAGTTATCGATACATTGATG
TCATGCAAAAAAGAGGATTATCCATGCCATGTGCATGATAGCCTGAAAAT
GGGCCATTCCAGAAATTTTTTGTTTATATCCCCGTCTTTCGTGCATTTTT
TTATTCTTTCTAGCCTCGGAAATAATTTTTCTTTTCCAGTGGTGGTCGGA
AATTCCGATGAAAATCCATGTACTTATGCTGTAAAATGCATAGGAAATTC
CACTCTTTTTTGCCTTTTTTAATTGAATACACCGTTTAGGAGTCTCGCTA
TCTCCACCGTGTGTGTTCCACCGTGAAAACGGTAGGTAAAAATGCGCACT
TTTGTACCGTGAGATTGGGTAACTTGCACCAGTGGAGGCTAACATGCATA
GAATGTCTATAATCTACCTCGCAACAAACTTTTGCAAATTTTTGCGTTCG
TTAAATTCCTAACCAGTGCGTCACAAACAGCCATATAAACAAAAGTCAAC
ATTCTCACAAAAGTTGTGTTTTTGATTTCCTCCAAAACATTTGTCTAAAG
CATTCACTTCCACAATAATTTATGTAATTGCAATTTCGGTCAGTCCACAG
TCGGCTTCAACATATACACGTGTTTTTATTTACGTGACCGAAGTGTCTAC
TAAAACAATCTGGAGGTAAGTGGCGAAGCAACACAGTAGATTATTCGTAA
AGTAAAGAAATATCTCTTGGCATTGACAATCAAATATAATAATACATTAT
ATTATTATTTCATTAATTCAAAAATCTAAAATTCATTTTTCATTCGTGAA
GAAAAAAAACAATAATGAATTAATATTACATACTAAGACGCCCCCGTTTT
TTACTCCGTTTAAATTTCCAATCTCCGAACGTGCAAAACGCCCGTCCGCC
AAATATCCACCCAATCAGCTTAATTTCACTATTGTCCTTTGACTTTCAAA
GATAGTATTTAAAAATTATGAATTTATAATAATTACAAAAAACAAAAAGT
TTGATACTTCATCAGTGAAATACTCAATAAATTCCTAGTTTCAATTTTCA
GTGGGCGTTTTTCTAGGGCTTTGTTTATCGCCCAATTTTTGCGTCACACA
AACTTTCTCAGCCGCTTGTAATAATTTATTTGCATTGCCAAATTTGGTTC
TCCATTGTCAAGTCAGGATCGATGGTGACGCATAAAAAAGAAAGGATTTC
GTCAGTTTTATGCATATATTAATTTGCGATATATTCTATTCGCCGCGCGA
GCGCACTTTTCGTAGACTAGTCGGAATACTTTTCTTTACTCGCGGGATTG
ATGGTAACTTTTCATCTTCGTTATTTTTAAAATGAAGCACAACCGAAAAA
AAACGAAACTTCAGAAAGTTGTGTATTTCCAGTGAGTAAACGATTCTGAC
AATTAACAAAATTGATGATGATGATGATTTTTTTTCGGTCAGGCAAATGT
CTTGTATTGGGGGTTCTAGTCTTGACCCCTAAGCCTACGCGAGATTGAAG
TGTTTGGATAAACGAAACAAAACTCCAAAAAAGCTGGTGTTTTGAAGCGC
TTCCGTGCGATCGAAATATCACTGTGATGCACTGCTAACTACTGGTAGCA
GCTGGTAGTTTTTCTGGAAATACTATTTTTAACTTACTATTTAAACTTAC
TTATCAATTATTTATTATTTACTATTTTAATATTTTAACCATTATTATGT
AACATTTTAAATAAACTTAATTTAAAAGATTTAAATTTTTTTATTTTCCT
AAAAAATTTTTTGTTAAATATTTGCGAAAGTAATTCTAATGAATTTATGC
AAATAAATATTTAGAAATAGAAATAGAAAAGACCTGGCTGGTCATTAAAA
TACAACTACGCAGCTCCGCTAGCAGCTCTACTAGGACCCTGCCGACGCAC
CATACTGTCAGGTGTATTTGTCCGGTGGCAAAAAGTATCTTTTCGCTACA
CCGGACGCAATACGTCCGGTGTCAGTCCGGTGTTGCATACAGGGAATTTT
GGACGCCGGACATTTATGAAACAACAAATTAAGACACACAGGACTGGTCA
TGTCCTGTGTTTTGATTGTCCGGTGGACAAAAATATCCTTCTCCGACACC
GGACATCCGACTACCTTAAGTCCGGTGTAGAGATTGTCCGGTGGTAAAAA
ATTTCTCCTTTTGGGCCAAATTGAAAAGTGGTCAACCAAAACACAAATTC
AAAAATCTTTCAAACAAAATAAGTATCTGTGATTTTTTTTTTAAATAACC
CTTAAAATTTTCCAATTTCAGCTTTTAAATCAACCGAGTCGCACTTTTAG
ACTCTGTAATCAGGTGATTATATCGAAACACAACTAGTGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAA
TTCCTTCCGTGACAATTTCAAGACAAAAAGTTTTTTCGCCAGTTTTGTGC
AAGTACACTATTCTTGATATTATTGCAAGTTCTAACTATTGGTACCCCCT
AACAAAAAATGAAATTACATTCCAATGCAACCTCCTTCATATTCACTTAC
AAGGTCTGAAAGTATTGTCCTTCCGTGACACTTTCACCTTGTCCTTCCGT
GACGGATTAAAAATATCTTGTTATTTTTAGAAATCTTGAACTTCAATGGG
TCTAATCCATTGCAGGAGAGTGTCCTACGAGGTTTAGAACCATTGGGAAC
CAGCTCAACCCTGTATGGAGCTCAGAATAAGCTTAAGTAAGGCTCCAGTA
CAGCGCTGTAAGCTTACAGCGTAAGCCCAGGCAATTCTGGAGGCCTAAAA
ACCGGTTTTCTGGCAAAACTACTGTTCCCAGCCGGTTCTAAACCCTCAAA
ATCGCTTCTGCACCATGAAAATATGCTAATTAGAGCCTTTGGAAGTAGCT
CACTTGCTTGCAAGGTCGCGTTTTTACTTTTTTTGCTTAAAAAAGCCTTA
AAAACGCTTAAATAGAGCTTTTTTAAAGCGTTTTTAAGCTATTTTAGTGA
AAATTCGTCGGTTCTGCCCCCTTCGCTGGACTTCAATGGGTCTAATCCAT
TGCAGGGGAGTGTCCTACGAGGTTTATGACCATTGGGAACCAGCTCAGCC
CTGTATGGAGCTCAGAAAAAGCTTAACTAAGGCTCCAGTACAACGCTGTA
AGCTTACAGCGTAAGCCCAGGCGGCTCATCTGGAGGCCTAAAAACCGGTT
TTCTGGCAAAACTACTGTTCCCAGCAGGTTCTAAACCCTCTAAATCGCTT
CAGCACCATGGAAATATGCTAATTAGAGTCTTTGGAAGCAGCTCACTTGC
TTGCAAGGTCGTGTTTTTACGTTTTTTGCTTAAAAAATATAATCTTTCCT
GTAAAATTTCCTAATGATTATCACCATTATGGTTGAACAATAAAAATACA
GTTCCAAGGTTTTGAAATGAACTGAATAGTAAAAATGGCTATGATTCATG
ATATGATGTGTCACTCCACAAGTTTCAGTCAACATTTCTTACGCTATTGC
TGATTTTGAAAAATAGGAATTTTTTTCCTTCCGTGACGGTGTCCTTCCGT
GACACTGACCTTTCTCAGTTGCAAAAGCCTGTAGTCATTTAAATTAATTT
TTTTGACTCAGTTCTTTTTTCAATGACAAGCAGATCAGACATAAGTTTCT
TCTGGTAATATTTTGGTTTTAAAATTCTCTTTAAATTCACAGGAATCTGA
ATCAGCATACTTTTGTCTTTTTTAATGTCTTTGCTGCGTTCCTTCAGGTT
CCTTCCGTGACAGAACCTTCAAAGTTAAATTATTCAACAAGGAAAAACTT
TTATGAAATTTATTTTGGTTTGGAAGTAGTAGTACTATGAAGGCTTTAAT
TCAGGACTAATACTATTTTCATTAAGTTTACCATTTTTCAAAAATAGACC
AAAAAAGGCTCTGATTTCCTTCCGTGACAGAAACGGGACTTTTCAATTTG
GCCCTTTTACACCGGACTTCCTTAAGTCCGGTGTGTCGGCAGGGTCCTGC
TCTACTCTACCATTTTTGTTTTGATTTAACTTTGTATTTTAATGACCAGC
CAGGTCTTTCATTTGAGGGCTATGCATGTTAGCCTCCACCGATGCAAATT
CTACGTAAAAATTACAAAATTTTTTAAATGTGCTGTCAGCAATAAATAGA
TTAAATATAAGTTAGTTCAGGTTAGTTATGTATAAAAATTTGTTTATTTA
AAATCTAGTATAAATAAATAAATGTATGTAAGTTACCCAATCTCACGGCA
CTGTGGAAGGTTAGAGGAATGTAAACATTGTCAATTTTTTCTTTCCTTTA
AAAAGAGAACGGTTTAGATATTTGAACATGATATCAATAAGGCGGCAATC
AAAAATATGTTCCATTCTGGTCCTAAAACATCTTCAAATCCAGTCGGTCA
NTGCATCAGGGCGGCAACCTAAAATATGTTCCGTTCGCGTCATAAAACAT
CTTCAAATCCAGTCGGTCAGTCGGTCGGTAGTAAATTTTGTTGGATTTTT
AAGATCTAGTAAATCCCGATGAATCAAGTCGGCAATCAACAGAATCTTAT
GCCGCCATCTTTAATCTGCCAAACTAAATGTACGCACGCATGTGTTAACC
TTAAAGCNCAAGATTAAAGATAGGGGAAAATGCGCGAAATTTTTTACCCC
CCTTCATAATTTTTTTACCAAGCATAGGGTTAAGCATAGTCGAGGCTCAA
GATTGAGCTTTACTTAAGCATAGTGAGCTTCAGCCGAAATTTACCGTATG
CTTATAAAGCGAAATGAGTGTAGTCAGTGACCACCTATCGATTTTATCGG
TGATCGAATACTCACTCGACTCCAAATTATGGCATTTTCTTTGACCATTT
TCGATTTGTTCAATCATTTTGATTACTTTTCGATTACCTTCGATCATATT
GAATACCTTCGATTGTATTGAGTACTTTCCAGCCTTCGATTTAATCAAAT
ATGTTTCCAGTAGCAGCATGTCAAAATAATCTGAAACCAAGTTTACTTCG
GCTAATTAAAACCTGCGATTCACGCACAAAAACCACTTTCGTTTTCTCCG
ACCAATCAAAATGCACGATATGAGTTACTTGAGGAAACCCATGGCGAAGG
CATACAAAATGGTGGGGGAAAATGGCTGGAAAACAAGGGGGTCAATCTTT
ATGGCGGGGCTTTTTTTGTGCTTTGGTTTTAGGTCAGTTTTTTGGTTTTT
ATTGATAATCGATAAGTGGTTGTTCGATTACTTCAATCATTATCAATTAC
TTTGATAATCGAATTTATCAATTAGTACCGTCTGGAATCAGTGATTCAAG
CTAATCATATTACTCCTATCTCTAGAGTAAAGAAGAGTGTCGGAATTAGA
GGAGGGGTGCTGACATTAAGAGGAGGGCTGTCGACATTAGACCAAGTTAC
AGTAGCTTCATGGGTGAAAAAAATCTGTCAATCATTTCGCAAGCGTAGAG
TATGTGAAGCAATCATAGTGATTATCAGTGGATAGTATTAAATTACATTG
TTATATCTTTTTATCTCCATTTTGGAACTATTGCAACAAAATAGAAAAAT
AAAAATAAGTTGTGTTTTTTACTGCTCCATTCACATACTGAATTTTATTT
TATCATTACACGAAAATAAGTAGGCGTGTAATTAACACAAATTAAGAAAT
TTTGTGTTAACTAAAACCCATTTAATCAAAACCAGCCGCATTGTCCTTGA
AAAAGCAAATAAACTTTATGTTAATTTTTTGCGTGTTAAATTTCAAAACT
GTTAATCATATGTGTCTACTTATTTTTCCTGCTTTTGTGGGACTTTAGCT
TCAGTGCTACATGTAGCATTGAGTAATGGCTGTAAAATGTTTCACCTTTT
TTCAAAATGTCAGTGCTCAATTTGAGTAAAAACCAAGTGTTACCTTTTTA
GCTTGAAAACCAGCAGTTTTTTCAGAATTCTTGTTTTTTAGTGTTTCCAG
GTAAAACTTTTAAGGCCTAAAAAATCATGATTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCTTATTTTCGGCCCC
CAGGGTATTGGCCCTACCGCGTTGCTGAATTTTGACATGAAAATTTCAAT
AAGGGTACATGAAAAAACTTGAACAGAACTCAATGTGGGTTAAGTAGACA
AAAAATAATGATTCAAAGACATGCTCTGTGTGCGCCCGTGCCCGTCATTA
TGGGAAAGATCCGAACCTGCGAACAGCGTCCAAAAAAACCCGACGATTTT
ACCAACCATCGGGTTTTCTTGTAAATAAACAGTCGGTCGTACGACCCGAA
CGGAACATATTTTTGATTGTCGTCTAATGATGATTTTCTGTTAAGAATCT
CTCCTGAAAATTTCACAAAAATTCATCACGAGGAAAAGAAAATATATTTG
ATTAAAAGAAGTTCTTTACCTACCATTTCTCTGCTAGGTTTCCTTATGAG
AACTGGAATTTTACCTACCGTTTTTTTACGTGAATTGGAAATTTCAAATT
TTGTTGAAAACCTTTGCACTCGGAAATTCTGTGCTGCCGCCCCCCTGTTA
CAGACAAATTCTGGAATGACCCAATACCCCAAACATAATACCCCACCACA
AAATTTTGTCCCCGAAAAAATTTATCCCATGAAAGTACAACAGTATACTG
TCAGTATAGACCTAACTCTTCATACAAAAATTACGGGAAACTTGAGTGCA
GGGTAGGGTACAAACACTTAAGCCAAAGTCCCTCAAAAGCGGGGCAAAAA
TCAGTTTTTTGAAGTTTGCAAAAAAACGCCACATAGAAGATCTTTCAAAT
TCAGTATGTTAATAGAGCAGTAAAAAATACAACTTTTCTATTTTTCCTTT
TTTTTTACAAAAGTTCAAGGAATGAAAATAAAGGGATACACTCATTTTGT
TTTATAAGCATAACGTTTATAAGCATACTGAAGCTCAAATTTCCAGAAAA
ATTAAGCATATGCTAAGCATACCTTGAGGCTCAGCCAAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
CGTTGCTGAATTTTGACATTAAAATTTCAATAAGGGTATATGAAAAAACT
TGAACAGAACTCAATGTGGGTTAAGTAGACAAAAAATAATGATTCAAAGA
CATGCTCTGTGTGCGCCCGTGCCTGTCATTATGGGAAAGATCCGAACCTG
CGAACAGCGCCAAAAAAAACCCGACGATTTTACCAACTTTCTGAATCGGG
TTTTCTTGTAAATAAACAGTCGGTCGTACGACCCTAATGGAACATATTTT
TGATTGCCGCTTAATGATGATTTTATGTTAAGAATCTCTCCTGAAAATTT
CACAAAAATTCATCAAGAGGAAAAGAAAATATATATGATTAAAAGAAGTT
CTTTACCTATCATTTCTCTGCTAGGTTTCCTTACGAGAACTGGAATTTTA
CCTACCGTTTTTTTACAGGAATTGGAAATTTCAAATTTTGGTGAAAACTT
TTGCACTCGGAAATTCTGTGTTGCCGCCCCCCTGTTACAGACAAATTCTG
GAATGGCCCAGCAATACCCCAAACATAATACCCCACCGCAAAATTTTTGT
CCCCGAAAAAATTTATCCCATGAAAGTACAACAGTATACTGTCAGTAATT
GTCATAGTAATTGGTTATCAAAGTTGTCAAAGTTATCGCAAGTAATCAAT
AACAATCAAAGTACTCGAACGATTATCGAGTCTTCGAAGGGTTGTTAAAA
AAAGTGATCGAATACTCAAAAATTTTGGTACTCAACATTCGATTGTTAAT
CGATTAGTTGTTCGATTACTTCGATCATTATCAAATACTTCGATAATCGA
ATTTATCAATTAGTACCGTCTGGAATCAGTGATTCAAGCTAATCATATTA
CTCCTATCTCTAGAGTAAAGAAGAGTGTTGGAATTAGAGGAGGGGTGCTG
ACATTAGAGGAGGGGTGTCGACATTAGACCAAGTTACAGTAGCTTCATGG
GTGAAAAAAATCTGTCAATCATTTCGCAAGCGTAGAGTATGTGAAGCAAT
CATAGTGATTATCAGTGGATAGTATTAAATTACATTGTTATATCTTTTTA
TCTCCATTTTGGAACTATTGCAACAAAATAGAAAAATAAAAATAAGTTGT
GTTTTTTACTGCTCCATTCACATACTGAATTTTATTTTATCATTACACGA
AAATAAGTAGGCGTGTAATTAACACAAATTAAGAAATTTTGTGTTAACTA
AAACCCATTTAATCAAAACCAGCCGCATTGTCCTTGAAAAAGCAAATAAA
CTTTATGTTAATTTTTTGCGTGTTAAATTTCAAAACTGTTAATCATATGT
GTCTACTTATTTTTCCTGCTTTTGTGGGACTTTAGCTTCAGTGCTACATG
TAGCATTGAGTAATGGCTGTAAAATGTTTCACCTTTTTTCAAAATGTCAG
TGCTCAATTTGAGTAAAAACCAAGTGTTACCTTTTTAGCTTGAAAACCAG
CAGTTTTTTCAGAATTCTTGTTTTTTAGTGTTTCCAGGTAAAACTTTTAA
GGCCCAAAAAATCATGATTTATTTTGGAGGGGGGGGGGTCTTTGAAATAA
AAAAGAATAGACTACCAGGTGTGCCAGAAATAATTTACCCTCTTTGATTT
GATATTTTAGGCAAAAGAAAAAATTTTTTTTTTAGATTCTTTTCCTTGGA
ATCAATCTTATGAAAGCCTAACTTAAAATTTGGCGTATTGCTTTTCAATT
TTAAAAAATGTTGAAAAACGAGGGTATCAAATTAGTTGTAATGAACAGAC
AGAAAATACGATTTTATTCATCAGCAAATGTGCTTCCAAAAGCACTGATT
TACATGATTAGACATAAATCAATTTTTTTATCATTTGTGGATCGTGATGA
GCTGCAATATTTCTAACGTGGCATCTTTCTCAAACCTATCTTTCTCAACG
ATAATGTAATACACGTGTAGTTGAAAAGTAATACACCAAATTTTAAATTA
GGCTTTCCTCTGATCGATTCCAAAAGAACCCCCTCTATGGGTGTGTCAAA
TGGTGCATGGGTTATAGTCAAAAAATGACTGTGGTGAAACATACCCCTTT
TTTCTGGAATGGTAATAAATATTTGACATTTCCATTATTTATTCACTATA
ATATAACACAATAGAGAAGATTTCTTAGAAACCGCAAACAACCTTCCCAG
TATTTCATTCACATATACTTTTTGAGCTATACAACTATTTGTATACTACT
TACCAGGTTTAAATCATAATTGTCCAAACTATTCTTCTTACAGTATAAAA
AGAGAAATAAAAATGTACTATTTTTGGGCATTCTTTGTTGTTGCACTTTG
GATTTTATGTCAACTGTCAGATAAATTCAAATACCATGTGAAGTATGTTG
GATATTGTTTGTACTGTATCTTTATTGCAGCATGCTCTGGTCTGTTTTGC
TTGTTTTACAAGCCAAGGAGCTCGATGAACATTTTCATTCCTCAGTTCTT
TATAAAATGGACTGGTTTTAAATGGTTGTTTGGTATCAATTTGAAGTATG
AAAATTTAGAAATTCTTCACAATGTGAAAAAACCTTGCGTTGTTGTCTCT
AACCATCAAACATCTCTGGATGCAATGCTGCTCTTAATTATGTCTCCACT
TGGAGTAGCTCCCTTGGCCAAAAGAGTTTTACTCTATGTGCCTATTTTTG
GTCCTGTTTGCTGGCTCTGTGGGACAATTTATATTGACCGTTCAAAAGGG
AGGTCAGCTATTCAAATCATGAAGAAGGTTGGCGAAGAGATGAAGAAAAA
TCTTACTACTCTTTGGATCTTCCCAGAAGGTAGCCGTTATCAACAGGATA
AGTTATTACCTTTCAAGAAAGGAGCTTTTCATTTGGCTGTACAAGCTGGT
GTCCCTATTGCTCCTGTCATCTTTGGTAACTACAGAAATGTGATTGATCG
GAAAAATAAGAAATTTGATGGTGGTGAGATCCGATGTATTTGTTTGCCAC
CCATTAGCACAGAAGGCAAGACAGTTGATGATGTTAATGATATTGTAGAG
AGCACCCATAAGTTAATGAGTGATGCTTTCGAAAAAGATTTCAAGAGTCA
TTCTCACATGTACAAGGATGTAACACCACTAAAATCTGATTAAAGCTAAC
AACAGAAAGCAAAGTGCAAAACAGGTATCAAATTAAAATTTGTGTTGGGT
GAGCTTGATTTTAAAAAGGGCCTTGCCTTAGAGCCCTAATATCAAAATGA
CCAAGTCCTAGGAACCATTTGAAGAGAAAAGACAATCTAGAAATAAGTTA
GAATAAATCTACGTCAATCGATCAAATTTTAAAAAATTCAGTAAGAAGTC
GATAATTTTTTTAGAATACATTGACATTGAATTTTTACTTCAACTTTTAA
GACCGTTAATTTTTGCATGCCTTTTATTTTATATTGAAGTTACATGGGTT
TGGAGAGGGCAGGCTTAGGCCCTTTTTAAAATTGCGGGAGAGGCAGACGG
ACCAATTAATTTAAAAATTTACAAAGATCCAGATTGTACATGATTATTAT
ATAATATTATTTTATGATATGATTGCTTTTTAATTGCATTAGAATTTTAT
TCAATTAGAAAATCTAGAATTGTGCACACCATTCACTTGTGGATAATAAT
GATTGCCTTACATTAACATGAACTTACAAAACTAGGTCCAGAAAGAAATT
GCAGGATTTTTGTCCTTAAATATTCTGAATGGCTCGATTGGTGAAATTTC
TTCCCCTAAAGTAATTCAGAATTATTTATTGCAAATGCTAGCAAAAATTT
TCAATTTTTTTGCCATAGTTCTAGGTCGGGTTATTGGGGTCGATTTTCAA
TAATTTAATTTCAGTAAGGATAATTTCTTTCTATGCACCTTGTATTATAT
TAAAATGAAATTTTGTTTACTAGATAGACAAGGCTATGCAAAATCTTCAG
CAGGTGTACCATGCAAGCCTACCAATTTTTTAAAATCGACTAAGAAATGG
GAACTGAGACAATAATGTGCCCCTATTTTTCTATTGAGTGTTACTCAATA
TCTAAAGCTTCACTCATTCATGAAATTTTAGGCTCAGTTTTTGTATCAAG
TTGTTTCATCTATCAACCCCTTTGCTTCTAATGTTGGCCAATGATGCTTT
TGTTCTGTCTTTTTAGTCAATGTTCTCATCTGTATCTGTATCTGTATCTG
TTATTTTGTACTTATTTAAGTATAATTTTTGATTTTGATTATAAATAATA
GTATATTTAGTGAGTTTTTCATCAAAAATTTTATACACTTAGATATTGAA
ATAATTTAAATTGTACTAATGATACGTTATCAGATTTAAAAAATCTAAGT
TTAGAAATTATTTAGCCATTATAAAACACAGTATG

Coding sequence (CDS) from alignment at sc0000079:423174..437708-

>TCONS_00007735 ID=TCONS_00007735|Name=TCONS_00007735|organism=Clytia hemisphaerica|type=CDS|length=831bp|location=Sequence derived from alignment at sc0000079:423174..437708- (Clytia hemisphaerica)
ATGTACTATTTTTGGGCATTCTTTGTTGTTGCACTTTGGATTTTATGTCA
ACTGTCAGATAAATTCAAATACCATGTGAAGTATGTTGGATATTGTTTGT
ACTGTATCTTTATTGCAGCATGCTCTGGTCTGTTTTGCTTGTTTTACAAG
CCAAGGAGCTCGATGAACATTTTCATTCCTCAGTTCTTTATAAAATGGAC
TGGTTTTAAATGGTTGTTTGGTATCAATTTGAAGTATGAAAATTTAGAAA
TTCTTCACAATGTGAAAAAACCTTGCGTTGTTGTCTCTAACCATCAAACA
TCTCTGGATGCAATGCTGCTCTTAATTATGTCTCCACTTGGAGTAGCTCC
CTTGGCCAAAAGAGTTTTACTCTATGTGCCTATTTTTGGTCCTGTTTGCT
GGCTCTGTGGGACAATTTATATTGACCGTTCAAAAGGGAGGTCAGCTATT
CAAATCATGAAGAAGGTTGGCGAAGAGATGAAGAAAAATCTTACTACTCT
TTGGATCTTCCCAGAAGGTAGCCGTTATCAACAGGATAAGTTATTACCTT
TCAAGAAAGGAGCTTTTCATTTGGCTGTACAAGCTGGTGTCCCTATTGCT
CCTGTCATCTTTGGTAACTACAGAAATGTGATTGATCGGAAAAATAAGAA
ATTTGATGGTGGTGAGATCCGATGTATTTGTTTGCCACCCATTAGCACAG
AAGGCAAGACAGTTGATGATGTTAATGATATTGTAGAGAGCACCCATAAG
TTAATGAGTGATGCTTTCGAAAAAGATTTCAAGAGTCATTCTCACATGTA
CAAGGATGTAACACCACTAAAATCTGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004386XLOC_004386Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007735-proteinTCONS_00007735-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007735-exon-sc0000079-1575043694:437535..437708TCONS_00007735-exon-sc0000079-1575043694:437535..437708Clytia hemisphaericaexon
TCONS_00007735-exon-sc0000079-1575043694:423174..425265TCONS_00007735-exon-sc0000079-1575043694:423174..425265Clytia hemisphaericaexon
TCONS_00007735-exon-sc0000079-1510915933:437535..437708TCONS_00007735-exon-sc0000079-1510915933:437535..437708Clytia hemisphaericaexon
TCONS_00007735-exon-sc0000079-1510915933:423174..425265TCONS_00007735-exon-sc0000079-1510915933:423174..425265Clytia hemisphaericaexon
TCONS_00007735-exon-sc0000079-1491911889:437535..437708TCONS_00007735-exon-sc0000079-1491911889:437535..437708Clytia hemisphaericaexon
TCONS_00007735-exon-sc0000079-1491911889:423174..425265TCONS_00007735-exon-sc0000079-1491911889:423174..425265Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:423174..437708 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.1463	22.3691	3.105	1.33738	16.5139	11.6343	11.708	11.8742	9.38896	9.23538	7.5487	4.51424	8.58005	6.32548	7.79571	8.25038	13.8409	9.39571	6.54534	8.71022	13.5407	12.8352	33.6776	32.5056	7.09227	9.02352	6.38537	4.64405	25.8433	23.6582
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002123Plipid/glycerol_acylTrfase
IPR004552AGP_acyltrans
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
GO:00038411-acylglycerol-3-phosphate O-acyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0008654phospholipid biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008654 phospholipid biosynthetic process
cellular_component GO:0016020 membrane
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity
molecular_function GO:0016746 transferase activity, transferring acyl groups
Blast
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BLAST of TCONS_00007735 vs. Swiss-Prot (Human)
Match: PLCB (1-acyl-sn-glycerol-3-phosphate acyltransferase beta OS=Homo sapiens GN=AGPAT2 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.866e-45
Identity = 87/241 (36.10%), Postives = 137/241 (56.85%), Query Frame = 2 
Query:  242 QLSDKFKYHVKYVGYCLYCIFIAACSGLFCLF-YKPRSSMNIFIPQFFIKWTGFKWLFGINLKYENLEILHNVKKPCVVVSNHQTSLDAMLLLIMSPLGVAPLAKRVLLYVPIFGPVCWLCGTIYIDRSKGRSAIQIMKKVGEEMKKNLTTLWIFPEGSRYQQDKLLPFKKGAFHLAVQAGVPIAPVIFGNYRNVIDRKNKKFDGGEIRCICLPPISTEGKTVDDVNDIVESTHKLMSDAF 961
            QLS   +++ K   YC  C  ++A + L CL  +  R+  N+ I  +F++   FK+ +G+  +  +   L   + PCV+VSNHQ+ LD M L+ + P     +AKR LL++   G + +L G  +I+R +  +A+ +M  +GE M +    +WI+PEG+R     LLPFKKGAF+LAVQA VPI PV++ ++ +  + K K F  G +    L  I T G T  DV  +V++ H+ M   F
Sbjct:   19 QLSRAAEFYAKVALYCALCFTVSAVASLVCLLRHGGRTVENMSIIGWFVR--SFKYFYGLRFEVRDPRRLQEAR-PCVIVSNHQSILDMMGLMEVLPERCVQIAKRELLFLGPVGLIMYLGGVFFINRQRSSTAMTVMADLGERMVRENLKVWIYPEGTRNDNGDLLPFKKGAFYLAVQAQVPIVPVVYSSFSSFYNTKKKFFTSGTVTVQVLEAIPTSGLTAADVPALVDTCHRAMRTTF 256
The following BLAST results are available for this feature:
BLAST of TCONS_00007735 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLCB2.866e-4536.101-acyl-sn-glycerol-3-phosphate acyltransferase bet... [more]
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