TCONS_00007701 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00007701
Unique Name	TCONS_00007701
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1314

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000079:131171..142337+

transcript sequence

>TCONS_00007701 ID=TCONS_00007701|Name=TCONS_00007701|organism=Clytia hemisphaerica|type=transcript|length=1314bp
gaaaattaaatgaaaattttagctcttaattaaaaataagttatgaaatg
tttattttgtcACCCCTTGTCTACTCCAAACATGAGTTAACTATAAAATG
CCTTCATTTAAACAAAAATCACAGTTACAACCAAATCATACGCGATGAAG
ACTTTAATCATTTTAGCAGCAGTGATAGTTGCCACCTTAGGGTGCCGAGA
TCTAAGCACCTACTGTCAACGTTGGGCAAGATATTGCAGAACAAATTCAT
ACGTTCAAAAAAAATGCCCGAAAACCTGCAACCGATGCCCCGCACCGCCA
ACCAGACAACCAGtatGTACAGATAACCATAGTAGCTGCTCACGATGGGC
AATCATTTGCAAAACCAATGATTATGTAAAAAAACAGTGCCGAAGAACTT
GCAACTTATGCGGTGGACCAAACACCCCGGCTCCACCAACCAACCCACCT
AAGACAAACGCCCCGGCAACAAACCCACCTAAGACAAACGCCCCAGCAAC
AAACCCACCTAGAACAAACGCTCCACCAACAAGTGCACCAGGAACCTACC
CACCCCAAGGATCATGTGGACGTCCACAAGTTGCAATGTCCAGAGTTGTC
GGTGGAAAAGATGCAAAAGCTCATTCATGGCCATGGCAAATCGGACTTCA
CCGCAACGGTGGATTTATGTGTGGAGGTTCAATCATCAACAGCCGATGGG
TTGTTACTGCTGCTCATTGTGTACATCGAAGAAGTGCTCGTGACTTCAAA
GTCAAATTAGGAGACCACGATAGGCGAAGAAACGAAGGTGAACAATTCAT
CCAAGTCTCAAAAATCATCACTCATCAAGGTTATGGAAGATTGAACAATG
ATATTGCTTTGTTACAATTGGCTACTCCAGCAAAATTCGGACGAAATGTT
CAACCAGTCTGCTTACCCAACCAAGGAGATGCTCCACAAGTTGGTAGCAA
GTGTTACATTACGGgaTGGGGGAAAATAAGACATCCTGGTTACTCACACA
CCATCCTTCAACAACTTGCTTTGACCATCCAAGACAAATCTACTTGTTCA
AGAATGAATGGAAAATATGCACCAATCACTGACGCTATGCTTTGTGCTGC
TAACACTGATGTCTCTGCCAATCAATCTGGTTGCCATGGTGATTCAGGTG
GTCCATTTGTTTGTCAAAACAGTAATGGTTCATGGACATTACATGGAGCT
GTTAGCTGGGGATCACCAAGATGTGACATCAAAGATGCTTTCACTGTCTT
TGCCAGAGTTGGACAATTTAGAAACTGGATCGAACAAAACATGAAATGAA
ATGTTAAATAGtat

Run BLAST on NCBI

transcript from alignment at sc0000079:131171..142337+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00007701 ID=TCONS_00007701|Name=TCONS_00007701|organism=Clytia hemisphaerica|type=transcript|length=11167bp|location=Sequence derived from alignment at sc0000079:131171..142337+ (Clytia hemisphaerica)
gaaaattaaatgaaaattttagctcttaattaaaaataagttatgaaatg
tttattttgtcACCCCTTGTCTACTCCAAACATGAGTTAACTATAAAATG
CCTTCATTTAAACAAAAATCACAGTTACAACCAAATCATACGCGATGAAG
ACTTTAATCATTTTAGCAGCAGTGATAGTTGCCACCTTAGGTAAGATCTC
GTGCTTAGCGTATTATCATCTAAACGGGGAAAAAGTTGGCATCTAACTTT
ATCAAATCGATTTTAGCTTAATTTTTGTATGTATGATGCCAGTAATAATA
CACCTATTCATGACacgcaccattgcaatgtcttgtTTGTCTGCCTTGGT
TGTAAGTGATGTAAAATCAGTCATTTTCAACAAATCAGCAAAGATTGGCA
GATGTTTTACTTTCTCACTTAAATTGTAATTTTAAATGACATGAACTTAA
TTCTTTATGATTCACTTTAGGGTGCCGAGATCTAAGCACCTACTGTCAAC
GTTGGGCAAGATATTGCAGAACAAATTCATACGTTCAAAAAAAATGCCCG
AAAACCTGCAACCGATGCCCCGCACCGCCAACCAGACAACCAGGTAATTA
AATTAGTTGGGTTTGGAAAAAGCAGGGTGTTTGGAAAAAGTGGGGTGGGT
GGAAAAagtctcaaaacttaataagcggggggggggNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggggttggtataga
aatgtcctgggtggaaaatctttgaaaaggaggctaatacagcagaatta
ggggaACATGGGGAactttcataaaattttttgaaagattaattagcggg
ggatgcttattaggtacctgagagtaggTTAAAACATGAAACCATTTCAA
AGAACGTGAATTTCCATTTTGATAATCGATGTACTACTGATGGTTCAGAA
TATCATCATTGTTTTTTATGTATCGCTTCCGATTACCCGTCTATGAGCTT
TATGAGTCATGAAACGCTAACACACTCCTGTCTCAGATAGGCTGATTGTA
TATCACTACAGATTTGTGCCTCAAGTAAATTcgtcaaattaaatccccgt
cAAAATTTCGACATATCCtcgccaaaaaaaatttctctttcaccaacctt
tttaaaattttaagaacaaatatcctacaatttatATCTAGAAATAATTC
TTGGaagtaaaatatattacaaaaattaatcgatacatcttttttatttc
cgTAATACTTATCTTCGTAGCCTATCTTATGTTcaataaatcttcaattt
tttcttttcaaaagtatGTACAGATAACCATAGTAGCTGCTCACGATGGG
CAATCATTTGCAAAACCAATGATTATGTAAAAAAACAGTGCCGAAGAACT
TGCAACTTATGCGGTGGACCAAACACCCCGGCTCCACCAACCAACCCACC
TAAGACAAACGCCCCGGCAACAAACCCACCTAAGACAAACGCCCCAGCAA
CAAACCCACCTAGAACAAACGCTCCACCAACAAGTGCACCAGGAACCTAC
CCACCCCAAGGATCATGTGGACGTCCACAAGTTGCAATGTCCAGAGTTGT
CGGTGGAAAAGATGCAAAAGCTCATTCATGGCCATGGCAAATCGGACTTC
ACCGCAACGGTGGATTTATGTGTGGAGGTTCAATCATCAACAGCCGATGG
GTTGTTACTGCTGCTCATTGTGTACATCGAAGAAGTGCTCGTGACTTCAA
AGTCAAATTAGGTAAAAGCTTATCGAAAAACAGTTTATTTTGATATTGAG
AACCCTTTTGCTTGTAGGAAAAGGTACAGTGTTTTCGAGCGTgcaacatt
ttctgaaaaatgtgaaaaattttctttaaatcaatttgaaacgtgtatac
acgtcaCTCGGGTTTGAAGGGTTAAAGCTAGATTTGAAATAGCATTACAT
CTCTATCGAAATTGAAGTTctgtaaaaattgttttcaattgTTCAGGTGA
CCACGATAGACGAAGAAGTGAAGGTGAACAATTCATCCAAGTCTCCAAAA
TCATCACTCATCAAGGTTACCAAAACAGCAGATTGAACAATGATATTGCT
TTGTTACAATTGGCTACTCCAGCTAAATTCGGACGCAATGTTCAACCTGT
CTGTTTACCAAACCAAGGAGATTCTCCACAAGTTGGTAGCAAATGTTACA
TTACAGGTAGGACCAATACAGATGATATCTATATAACAAAGGCGAGacta
aaataaaatctaaactTCGCTCTCCCCagtgataatattgaaagtacAGT
AAAAAAAGAAAGTCCTTTGGTTCGTAGCCAAATACAGTTGAGCCTCAAAA
ACTTGAACAGCTCCCTTAACTCGAACTTAGCTggccccttcagttaacaa
tgccctaAAAAACCTTGCCATGATTCGAAGAAATTCCCCCCCCCCTTGCG
CGTGGTTGTGTTACAGAGACTCAACTAAAGTAACATTGCTTTTGTTTGAT
GGCTGCAAAAGAGAGTTTTCCGGTAATTTCAGCAATGTTCAGTGTTTCAT
TTTAACTTATTACTCAGGATTACGCCAATATCTATAATATTGACTCTATC
AGTGATTAATATCCATAATCATTATATACATCAACAGCTGTTGAAAGTCT
ACCAATTACATTATCATTTTTTAAGGATGGGGAAAAATCAGACATCCAGG
GTACTCACACACCATCCTTCAACAACTTGCTATGAAAATCCAAAGCAAAT
CTACTTGTTCAAGACAGAATGCAAAATATGCTCCAATCACCGATCAAATG
TTGTGCGCTGCCAACACTGATGTCTCTGCCAATCAATCTGGTTGCCATGG
TGATTCAGGTGGTCCATTCGTTTGTCAAAACAGTAATGGTTCATGGACAT
TACATGGAGCTGTCAGCTGGGGATCACCAAGATGTGACATCAAAGATGCT
TTCACTGTCTTTGCCAGAGTTGGACAATTTAGAAACTGGATCGAACAAAA
CATGAAGTAAACCAGCCAATGATATTGAACGACTTTTTCTAGGATTTTTT
TAGAGTCACAATATGAGAGCATTATTGTTTGAATAAATCCTAATTAAAAA
GATATGTCTAAATACTATTCTAAAATTTAGTGTGTGAAAAATGATGTGCT
TCATTCTGACTAGATGTACGCTTTTATACCAATTAAATTTTGAgtcaggc
tgggctgttctaAATGTTATGAATTTTTCAGCCTCATGGTCTCAATTGGC
CttatgaaaaaagtgtttacgTAAATTTACTAATATTTTTAACTTGTAAg
ctttaaatggaaaaaaaaggaaaactacCAATATTTTATTAAGGATTTTA
ACTACCAGTTGCTTTTTGGCCCAGCATTTGGCCTTTCATATTTGCCCAGT
TCGTGTTGTATGTCCGTCCTTTCACTTTCATAATTCAAGATTATTCTGGA
AGAAATGGTGCCTTGCAACATTGCGAGCAAATATTCGACTGTTGGTCCTG
ACTTATTTTTTTACCTATGATCTGGAATTTCTGAGCCTTTAGGAAGTGTC
TAAGTTCGACTGAGAAGTCAATATTGGAGTTCAACTTCGATATCTTGAAA
TTTGACATAGTTGAGTCCCGAGTGGAATTCGAACCCACACATGAAACGCA
CCCAAATCAGGCAGTAGAACGTCAAATTATAAGGTGTCAATTTTATATGG
gatgaagtaaaaaaaaataatagcccatgtattcgtttttttttccgGCT
AGTTGAAATATGGGCGTGGTTATGAAGTATTTGAGTTAAGTTATTGACTT
TATTTCGTGAGAATGATGcaattttaaagattatttataCTTCTCCAAGT
AAATATTCCTTATTTGTATGTTTTCACAGCTTTGGATGTATattacaaaa
ctaaaaaaattgcaaagatTTGTTTTGGTTAGCTGTCGTATATACATATA
CTTCGTTCTCCTAATagttgatttttaatttttactgTTGAACTTGTTTT
CaagatgaaaatgtttttaattttaacaGCAGTATTTTTAGCTGCGTTAG
GTAAAGCTAGAACAAGAAGCTTTGCTCAAACAACACTAAACTCACCAAGT
ACAAATATTCCAGGAACAAACCTACCAAAAGGATCATGTGGACGTCCACA
AGTTGCAATGACAAGAATTATCGGAGGACAAGACGCAAAGGCTTATTCAT
GGCCATGGCAAATCGGACTTCACCGTAACGGCCGATTTATATGTGGAGGA
TCAATAATCAATAGCCGATGGGTTGTTACTGCTGCTCATTGTGTTTTGTA
TAGATCTGCTCATGAATTCAAGGTCAAATTAGGTAAGTCGTTTGTTGTTG
CGTTGGGGCGGGGAAGGGCGCTCTAATACACCCTCTTCTCGcaaacccgg
taggatttttttcagccagtggggatgacaataacggactaaaactcgaa
GGGGATTTATATTCCCATATTTCTTATGGCTAGGGATtcatattcttttg
ttttcaagtcaggaGATTCCgggtggggatgggaaaaatagtataATGTT
TTGCAGTGAGCATTGGTTTATTTAGTTATTTTCGGTAGGAAAGAAATCGG
AGTATAATTTTAAACCAGGAAGGacaaattttggccaatttttcagtggg
ggtctgtgagaaggggttatTTAATCCTATGAAGTAGGGTAAAGAGTTGT
TTCATTATTCCAGGAGACCACAACAGAAATGTAAGCGAAGGTGAACAATT
CATCCAAGTCTCCAAATTTATTATccacaaaaattacaaaaactcGAACA
ATGATATTGCTTTGTTACAATTGGCACAACCAGCAAGATTCGGAAAAAAT
GTTCAACCAGTCTGTTTACCAAACCAAGGAGATGCACCACAAGTTGGCAG
CAAATGTTACATCACAGGTGAGCctttttttaatagattttttaaTCAAT
CCATCAAACAAGATATCAGCACGCAATACTGCTAAGTCCCTACAATGAGT
ATGATATGGCcgagttttcaaaaatcaaccTCTGACGACCAAGTGAGGAA
TATTATCATGTTAATaactagcagactgtatcagtaacATGtttactaca
gggtgtcccaaaaaaagtatcgagtcatACTATTCTATAGAAAGAtggtt
cttgtgtgtgtttctcTAAATTCGTAATGTTTATTCTCatattaatttca
atttcatgagacattttttatgaataacttttacaaataaatatttctca
ataactttaacgtcatgaaaattgggtatatattttcttagaTTTTGTTA
ATTAAACACATGCAACAACcatctactcagaatcatgttcggaATCGATa
ctttttccggacaccctgtattaaCAAATTCCCCATAAAACCTTCAAGCg
cgtaattgaaatgagtttctttcaaaataaatcttttaattgattcccaa
atgtatgaTAACAACAATTACTAAATTATTGATCATGGTATtgttacttc
aatggaatcgaaataatagacaggtCTTTGGGTGTAACAATGAACTTAAA
TTACACCCTTAATCCAAGATTCAGGATTGGCGTCATGGTTAATTTTCTCT
GCGCTAATTGCGCGCTTAATAAAATTGCTATTTACCGTCACAGGTCGTAA
TATGGGTCAGCATGTGCATTTTCACGTATTTGTGTTGCAAGTGAATGGGA
ACTAAAATTTGttctaatagacgatatcggatttagataaatgcaatgca
ttctggtttctagggactctcaaaggaattataatctattataattgatc
taatataattcctttgagagtccctagaaaccagaatgcattgcatttat
ctaaacccgatatcgtctattgcggAAAATTCGAGTTTTTAGAGACTTGA
GGATTTAATTCATGAAGGGGCCAGAAATATATCACAGCTAAGGAGACATT
CCATTTACAGACTAAATTAAGGAAGATTAAGGAAACTCTATTGTATAAGT
AAATGAATCTCATTTAATTTAAGGATGGGGAAAAACTAAACACCCGGGCA
ACTCACACATCATCCTTCAACAACTTGCATTGAAAGTACTTACCAAATCT
GCTTGTTCCCAGAGAAATGGAAAATATCATCCAGTCACTGATCAAATGCT
TTGCGCTGCCAACACTGACAATCCGGCAAATCAATCCAGTTGTCATGGTG
ATTCAGGTGGTCCATTTGTTTGTCAAAATGGCGATGGCTCATGGACATTA
CAAGGTGTTGTCAGCTGGGGATCACCAAGATGTGACAAGAATGATGCTTT
CACTGTCTTTGTAAGAGTTGGACAGCTTAGAAGCTGGATTAATCAGAATA
TGAAATGAACGAGCATAATAATTTTACTTATCATTAGGACTTTTTATGCT
ATCTCTAACAATGAGTAAACAGATAACCCAACCTACTCGAAAACAGCATT
TGgtctttttctatttctattgcGCCACAATGTACACCCTGAACCCTATT
CTCACTATTCTATCGGAAGAATTTCTGCAAATATATGACTAAAACCTTCC
CTAAGCACTTTTTGTGGGAAGGTGAATCAAATATAAtcgaaagtttttga
aatgcttcttataaaattggttctaataaaaaaatttttgcaattcaaTC
CAAATTTGTTCGTTAGTTCTAATACTAAAATCTAAATCTTCAACTGGCAT
TTaacaatttgatattttaatcaAGGAAAGTCAACGTGCTCAAAATGTCT
GGACAtacttttttgctattttttaatgttttttttgagtcaaaaagtga
taaaatctGATTTCAGTTTCTTCATTTTACTCCTGTGTCTAAAAAGTCTT
CGACTGAATACTATAACAGGAGTATTTATTATAATACAGTTGTTCAAATA
TGGCATTTCTACAGaataaaattattaaataaTCAACTATTGCAGAAAAG
TATGGGAAAACCCAGGTGCACTCcattaattaaaatttgaaacattttgg
tGGGTAAAGTTAGAATTATTGAATTAAACTTGTAAAATTGttaccaaaaa
aattattaacattttaaattttatcatttcatACAAGGGTATTGTTTAGA
CAGCTTGAGTAAATTTCATCTTTTAATTATATGGTATGCAAAATGCGTGT
CAATGGAGTACCGATGCAAAGGAGGTGAAACAATCAAGTTTTTTATTTAC
TGAACCTTTGAAAGGTTTTCCTATATAAATACCCCTGTTTTGTGTGAAAT
GTCACATTCAAAACTCGTCAGGATGAAGACTTTGATCGTTTTAGCAGCCT
TGATTGTGGCCACTTTGGGTAAGTCATCTGTTCCAATTAATTCATGAAAA
CGAAATATCTTAAAGTGAAGGAGGaatttttggtggaaagaaaatatttt
ccgccaatccgccaaatttaaaattattttttcatgaattcccCTAAGAG
AGATTTGCTTTTTCGATAATGGTTTtggtaaaaaatataatttaacccta
ttcggcctagggggggggggctgtccctgttcggaggtcaaattattggt
aatagctcctgaaataatagagcttttgccatgaaatcttctgtaaattc
ctaacttttattcagcttaaaataaaaaaaaatttgacacctaaaaattt
caCACCTTGaacatgatgacatttctgacagtaaggtgtcacaaaaattg
acacttttacaataaaaatttattttttatgtcaaatatatcctttaaac
cgtaatttattgaatatttaagataaaataagcattctaaactcaggcaa
cttttttcttaagcctttgaaaatacaatagctatttataataacaaagg
aaatgagttttgtcaaaagttaccttatgtgacaaggatcttgtgtgcca
aattcatccaaaaagaaccattagatcgaaagttaaGTACAGGAAAAATg
accaaattaaatttccgccaAAATAGTTTCCTAAAAGGTTGTTGATACCG
ATTTTGTCAACTAAATTGCATCTTGACCATCGGAACATTAAACAATAGAt
attaatacaccttttctacCGTAGCTGTCTATTCACCGCGTGGacatttt
tttgtccattttaccacCTTAAAACTGCCCCAGTCTATTTTTCGCaacta
aagacaatagaaaaaaatgtaaaaaaaggattggatcgagtttggggtgg
taaattaaatattaAAGTTGCACGCGCCTGGCCgcacgactacggtcgaa
aaggtgtattaagaATAATGAGTTTGCCTATGGTGTACTTACATATACAA
ATTTTAGCAACATTCTATTTCAATATTTAGCTTGCACAAATAAATCTACT
TTTTGTGATCAATACGATAAAGCCATTTGTCATCATGATTGGATGAAAGT
CAACTGCCAAAAGTTGTGTAATCTATGTGGTCCATCTACACAAGCTCCAA
CACAAGCACCAGGTAAAATGATCAGAATATATCCATAATTAACGGAATTT
TTGAGACTCCTTATATCAGTGTTCTAAATGTTacaaaattttttatataa
aatcaTTTCTGCTCAAGTAAAATTCCATAGTATCCGTTTGTTGGAATGAT
TTTCGAATGTCACACTCATTGATGATTAAATTTCAGGAGGATGCGTCGAC
AAGAATACAAATTGTCCACATTGGGCATCACATTGCAAAACCAATGCATA
CGTGAAAGAAAACTGCAAGAAAAGTTGTAACATGTGTGGTCCAAGTACCC
CTGCCCCACCAACAAGTGCACCAGGAACCTACCCACCCCAAGGATCATGT
GGACGTCCACAAGTTGCAATGTCCAGAGTTGTCGGTGGAAAAGATGCAAA
AGCTCATTCATGGCCATGGCAAATCGGACTTCACCGCAACGGTGGATTTA
TGTGCGGAGGTTCAATCATCAACAGCCGATGGGTTGTTACTGCTGCTCAT
TGTGTACATCGAAGAAGTGCGAGTGACTTCAAAGTCAAATTAGGTAATCA
GTGCTAGTTCCTATTGTCATTTTCCTTTTATCTGTCCTTGAGTATATGTA
TGGCTCATTGACCATCGAGTTACACATTTTTATTTGTAAGCATATCTTAA
CTCATATCATGGAAAAACTTAAGTAAGCATTGTCTAAGCATATACTGAAC
CTCAAGTTAACAAAATTATAAAGCCCTTAATTTCCTTAAATCCAAAAAAC
ATGCTTATAAAATGCAACTTATTATCATCACATTGACTTAAAATAAGCAT
ATGCAAGAAACGTAGGCTCAAAATATCACACTATGCTTATAAGAAACCGT
GTAGTATATATTAGTAGAATAAAAGACTTTTTACTCAAATATTCAGGAGA
CCACGATAGGCGAAGAAACGAAGGTGAACAATTCATCCAAGTCTCAAAAA
TCATCACTCATCAAGGTTATGGAAGATTGAACAATGATATTGCTTTGTTA
CAATTGGCTACTCCAGCAAAATTCGGACGAAATGTTCAACCAGTCTGCTT
ACCCAACCAAGGAGATGCTCCACAAGTTGGTAGCAAGTGTTACATTACGG
GTAGGATAGCACATTGTTTATATTTTCTGTATGTTATCATTCAATATTGA
TTGGAAATGAGACAAAACTAAAAGTACCAGTTTCTTATAGACAAcaaata
aattattaaaaattacaaGTAAAATTTCCCACCTTGATCGCCTCGTAAGA
ACTTATAATTATGAAAGGTTAATTCAAATCCAATTGTGAGTTAATAAATT
ATTTTCTGGTATTCTGGTTCTGACTGTCCATCTTTTGCTCTTCCAATTTT
GATTGTTAATTACAATAGGCAAGAAGTTGGTTGGCTCAAGTAAAGGCTTT
GCTTTCTTTTGGCGTCTCAAGTAAAGGCTTTgctcttttttgacgtcaat
aaaatttcttcttttaggaTGGGGGAAAATAAGACATCCTGGTTACTCAC
ACACCATCCTTCAACAACTTGCTTTGACCATCCAAGACAAATCTACTTGT
TCAAGAATGAATGGAAAATATGCACCAATCACTGACGCTATGCTTTGTGC
TGCTAACACTGATGTCTCTGCCAATCAATCTGGTTGCCATGGTGATTCAG
GTGGTCCATTTGTTTGTCAAAACAGTAATGGTTCATGGACATTACATGGA
GCTGTTAGCTGGGGATCACCAAGATGTGACATCAAAGATGCTTTCACTGT
CTTTGCCAGAGTTGGACAATTTAGAAACTGGATCGAACAAAACATGAAAT
GAAATGTTAAATAGtat

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004365	XLOC_004365	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000079	supercontig	sc0000079:131171..142337 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0216468	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.282436	0	0	0	0	0	0.0949685	0

Blast

[Close]

BLAST of TCONS_00007701 vs. Swiss-Prot (Human)
Match: CTRL (Chymotrypsin-like protease CTRL-1 OS=Homo sapiens GN=CTRL PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.203e-51
Identity = 109/256 (42.58%), Postives = 151/256 (58.98%), Query Frame = 1

Query:  565 CGRPQV--AMS---RVVGGKDAKAHSWPWQIGLHRNGGF-MCGGSIINSRWVVTAAHCVHRRSARDFKVKLGDHDRRRN-EGEQFIQVSKIITHQGYGR--LNNDIALLQLATPAKFGRNVQPVCLPNQGDAPQVGSKCYITGWGKIRHPG-YSHTILQQLALTIQDKSTCSRMNGKYAPITDAMLCAANTDVSANQSGCHGDSGGPFVCQNSNGSWTLHGAVSWGSPRCDIKDAFTVFARVGQFRNWIEQNMK*N 1302
            CG P +  A+S   R+V G++A   SWPWQ+ L  + GF  CGGS+I+  WVVTAAHC +    R F V LG++DR  N E  Q + VS+ ITH  +    +NND+ LL+LA+PA++   + PVCL +  +A   G  C  TGWG++   G  +   LQQ+AL +   + C +  G  + ITD+M+CA      A  S C GDSGGP VCQ  N +W L G VSWG+  C+++ A  V+ RV +F  WI Q +  N
Sbjct:   19 CGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGFHFCGGSLISQSWVVTAAHC-NVSPGRHFVV-LGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQVALPLVTVNQCRQYWG--SSITDSMICAGG----AGASSCQGDSGGPLVCQKGN-TWVLIGIVSWGTKNCNVR-APAVYTRVSKFSTWINQVIAYN 264

The following BLAST results are available for this feature:

BLAST of TCONS_00007701 vs. Swiss-Prot (Human)

BLAST of TCONS_00007701 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CTRL	1.203e-51	42.58	Chymotrypsin-like protease CTRL-1 OS=Homo sapiens ...	[more]

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TCONS_00007701 (transcript) - C. hemisphaerica