TCONS_00007690 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007690
Unique NameTCONS_00007690
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3072

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007690 ID=TCONS_00007690|Name=TCONS_00007690|organism=Clytia hemisphaerica|type=transcript|length=3072bp
TGAGGAGAAAATACTACAGTGAAAAGTAAGCATGGATGTTGCCGATTTGG
ATTTAGAGGATGGACTCATGGTAACACCAAGCGAAGCCTACGAATTTACC
GTTCATTTATACGGCCGCAGTGATAGCACATCAACAAAATGTGTCCTACA
GATTCACTATCACGAAAAGACTTTATCGTTATTACGTCATGGACAAAAAG
TTGAGAATTATTTGTTCAGCTCTTTGAGAGATGTCGTCGGAGATGATGAA
GTTCCGAGATTGAAAATACGATTCGATGATTTCAATCAACTTGATATTGA
GACTGGAACATTGGAGAAAAAGAATGAGATTTTTACATTATTAACACAAA
TCATTGATCAACAATATAGATCTGAAGACTCAAAAGAGGATGCCGTCGAC
CCTAGGAGCCACACCATCAAAGAAGGGATCCTTGACAAGAATGGCCATGG
TCTCTTCGCCTCCTTCATGTGGCAAGAAAGGTACGTCAAATTGTATCCTG
GTCGGATGGATTACCATCGTGTCAAGGCAACCAATCATGAAGGTCCTGCT
CTGAATCAGGTTCGACTAACCTCCAATAAATGCTCTATTCGAGCAGTTGA
CGAGAATACTTTGATACTCGGCACACCGAATAGAGATTATATATTTCGAA
TGAGAAAGCATGCTCACGTCGACCCTCGGACTATGCTTAATGACTGGAGA
TTGGCTTTTGAGAGAGCAATTCAAAAAGGTTCAAAAGAAGTCAGTTTGGT
GGACAAACGAAGATTACAACACGAAAACAGATTACCCATCAATAGAGGTA
AGGAAGACGAAGTACCTCAACCATGTGAAGTCGGAAAGCCTTCGCCAGCA
AATGAAGaaacaaagtttgaaaatgCCCAGAATGCTGCTATTACGCAAGA
TGATAAATCTGAAGCTTCAGCCATTTCAGCTGGAAATCAACAAACAGCAA
AGATAGAGAATGATTTTACAACCAACACAAAAGATGCCATTGGACAAGCT
CTACTGTCGATAGCTACTGCCAAAGAACCAACTTCATCCCAAAAGGCTCT
TCAAAGCGATGTAACTCCATCACCAAAACAACCAATTCCTACATCTGAAC
CATCCACAACTGAAcccattcataaaaaatcaagcACAGAGATATTGAAA
GAGACACTACCTGAAGCGACCAAATCTGAACCACAAATCAGTGCTTCAAA
ACCTGACGCCAGCACATCTAGAACGTCATCACAACCAACATCCATTGTAC
CTAAGCCGCCTCCTTCGCCCGGAATTGGATCTGCCCCACCACCACCTCCG
CCTGGAAGTGGATCCgccccaccaccaccaccacctccaccaccgcCGCC
AGGATCATCGACAGCATCCATTGTTCACCTTCCACCGAAGAAAGATATCA
TTCCAAatcgaaaaatgaaaactctTCCCTGGTCAAAAGTTTCGGACGCT
CAAATCAATACATCATTTTGGGGAAATGCCACAGACCGTACAAATCAAat
cgattttcaaaaacttgaaaagtcaTTTTACTTGAAATCTTCAGATACGG
AGAAAAAGGGAGCTCAAGAGCATCACGAGTCGCCAAAAcaagagaaaaag
aaatcattACTTGATCCTAAGAAAGCACAAACAATagggattttattaaa
aaatccaGAATTGGAGcttgaaaatgtgaaaaaacgattGTCAAAATTTG
ATGTAAAGAAAGACGGCTCGCTTGATGGTTTGACTTCTGAAGaaattaaa
gcattaaaaatctGTGTGCCAACTGATGATGAAAGAAAATTGTTCCATAA
TAAGAAAGAGAATGAACTCGTCGATGTTGACAAGTTGGTGTTCGAGCTGA
CCACCATTGATCCGATCGTTTTACAAGATATGTTGGCAAACTTGCTTATT
ATCCGTGAAATCCCCGAGCAATTAAGAGGTATTGAGCCACCAATCACAAA
TGTTATCAATGGTTATAAATGTTTACGAGATAGCaaagattttaagaaac
tcctCGAGTATATCTTATCCATTGGCAATTATATGAACGGTGGTACCAAA
GAGGGATGTGCTTATGGCTTTCGGCTAAGCGCGTTACTTAAACTAGCCGA
AATCAAGAGCGCAGATGAGAAAGAGTCGGTACTACAGTTCCTAGTTGAAG
AGCTTTACCATAAAGACGCCGAGGTATTTGCTTGTTATAAAGAGATGGGC
GATCTGCTTCAAATGAGAAATATTGATGACGTTAAACCTGAATTAAAGGG
CGTCGAAACAGAGCTGGTACAACTGAAAGGTCTTAAAGCCAGTCCTGGAG
GTTTCGATGAGCAGTTTGTTGAGCAAACAAAGGAATTCATTAATACCCAA
TCAAAAGAGCTTCTACGGTTACGACAATTATGGTGTAGCCAGGTTGAGAA
TCTATCTTCTCAACTTAAGAAAATGTTTGGCGAGTTCCCGTCTTCAAATA
TGAAGAATTTTATGGAGATTGTCAttaggtttttgaaaaaatacagaAGA
ATGGCACTTGAAGTTGAAGAGAAAGAACAATATATGCAAAAATGGAACaa
agaaaaagcaaacaaaggaCTTTGAATGTTAAAGCGATGGGAACCAAGAC
AatagcgtagacaagaggggcgcaaaatttgcgACATTGTAATTGTCTAT
tgataatataaaaatataattactgtgtcataaaaatctccTCTCCTACA
CAAATATTGCGCCCTttttgtctacgctactgcatGACTGAATATTATTC
AAGGATAACAGTTCTAAGATGTTTTTCAAAGTAATCGGCTACCACCTACA
TCGTCTGGAAGAGTATGGAGACTTATCCCCTGAACTTTTCTTTGTAAATC
CCCTTATACCGATTATCTCTGTAATAATTctttaaaatcatttcaaattc
aattccgggttgataaaacaaatttcaaCCATCTTTTGGCTCATTATTCT
AATTCTCTTGCCTAGGGGGTTGTATTATTTATTAGTAATTGCggttaaaa
aaaagttggtatacTCATAATTATACTCCCTCTTCTCTCACAGACCCatt
aggattttttcagctatTGGGG
Run BLAST on NCBI

transcript from alignment at sc0000079:85311..92344+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007690 ID=TCONS_00007690|Name=TCONS_00007690|organism=Clytia hemisphaerica|type=transcript|length=7034bp|location=Sequence derived from alignment at sc0000079:85311..92344+ (Clytia hemisphaerica)
TGAGGAGAAAATACTACAGTGAAAAGTAAGGTATACTTAAGTTACTTATT
ATATTGTTGGGGGTCTGGGGGATATGCGACATGGGTATGGTAATATGTTT
TTATCGTTAGTTCATTTTTAAACAAGAATGAGCGTCAATTTTAGTGATGC
TACacagaccccccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNACCCCCCATCGTTGTGCTCAAAAACAGACACCCCATCGTTGTAC
TCAAAAACATAGATGTCGAAAATCCGAACTTGATGACTGACTGGATTATA
TTTTCGAATTCTCGAGTGAGGAGGTACACACATTTTCTTGAGTTCCACAA
ACCACGAGATTCTGAAGAGAATACCTGTTTCATCAAGTAAATTTATTGGT
GTGCATctcttaaaaaattttttcctagTCACATCGTTAtactagttttt
tttttcaagtactCACTGCcttcgttttgtataagattcccaattactgc
actaagattcttgtcacttttccggGATCTTTCCACTATTTTTCTTAGGA
TAACtggcatgagattggaaaggttttgtttctaaaggtacggaaaattT
TGTGTTTACTCACGAAACTGACTAACTTTCTGAagcttattttttcaaat
accCGGAGTCCTGCTCTTTTTCCGatagaaaagtggcaaaggaatctttg
aacggaaatgggaatcttatacaaaactaCGGTATTTCGAATTGTCATAC
TCTTTCGCTAGAGGATAAGCAGAAGCCTGTTTGTACTCACTACATGTCTA
AGCACTTCCCTTTCTTGTAAAACTTCTTACTAAAACAAATGCCATCATTT
CGTCTATGTATCTCGTCATTAAGCTGTAACTAAGGTAACGCTTGACTTTG
ATATTATAATCCATGTTGATTTAATATGAAGGTTTGATGATTGTTTATAC
TGCTTGTATGTTTGATGTTGTGAGCGATATAAGTTATGTTCTGTCACTTA
GTCAGTTGTTTCATCGGAACTAGTCCGACCAAAGTATTTGAAACAGGTGT
GTTTTGTACTTTGTACTATGCTTTTAGCTGGAGAACTACATTATGAGCAG
TTTccaggatttttatttttagtttgaaggtttttttttggtaaaaagtt
TGTCTGTTTGCTTACCCATCAATATTAAACTAAAGGTTATCTGTTTACTG
AATTGCCACAAATCTTTGttggaaaaacgaaaaaaagccGTTTTGAATAA
ACCAATAAGGAAGTTTCTTGACTGATATGAAATACCATGTCTAATCTAAA
ACGGAAATTTTCTCTTGTTTACTTTAGCATGGATGTTGCCGATTTGGATT
TAGAGGATGGACTCATGGTAACACCAAGCGAAGCCTACGAATTTACCGTT
CATTTATACGGCCGCAGTGATAGCACATCAACAAAATGTGTCCTACAGAT
TCACTATCACGAAAAGACTTTATCGTTATTACGTCATGGACAAAAAGTTG
AGAATTATTTGTTCAGCTCTTTGAGAGATGTCGTCGGAGATGATGAAGTT
CCGAGATTGAAAATACGATTCGATGATTTCAATCAACTTGATATTGAGAC
TGGAACATTGGAGAAAAAGAATGAGATTTTTACATTATTAACACAAATCA
TTGATCAACAATATAGGTAGGATTATAGTTCTTGTATATATACTTTCTTT
TATAAGGGTTAATCATATAGGAANTACGGCCGTAGTAATAGCACATCAAC
AAAATGTGTCCTACAGATTCACTACCACGAAAAGACTTTATCGTTATTAC
GTCATGGACAAAAAGTTGAGAATTATTTGTTCAGCTCTTTGAGAGATGTC
GTCGGAGATGATGAAGTTCCGAGATTGAAAATACGATTTGATGATTTCAA
TCAACTTGATATTGAGACTGGAACATTGGAGAAAAAGAATGAGATTTTTA
CATTATTAACACAAATCATTGATCAACAATATAGGTAGGATTATAGTTCT
TGTATATATACTTTCTTTTATAAGGGTAAATCATATAGGAACAAGACAAG
GGGCTGAATTTGAACTAACGACTAAGAAAAAATCGAAAGGAAGCGTccaa
tttcagaaattttcgaaATGCATTCTGAATATTGTaagcattttaagaac
attataaaaaCACTAACAAATATAAGAATAGCTCACCCTTAGTCATATTT
ACTGGTTCTTACGAAAAACGCGTATTCCAATCTAATATAACATTTTGAAT
AACTTGAAACAGAATTGCGTACAttttagactagagtctacttctggctg
aactttgtgAAGAACAGTGAAGCAGACTAGAGGATTTCGCCATCTTAAAt
cttttcactttcattttcaaaaattatatgaaaacatcaaaacaataaaa
tgttttctaaaattccATCGaagtttatgaaactataatgaaaaggagaa
aatacctccaaaatttcaaaacattcgttTATTGGTCATGGTTTTCTGTT
TGATCTTGTGGCATgtatttgctaccacctcaagcaaagcaaaaaaataa
agtcGGCCAAATTACACCGGGCTACTTATCAgtgccatccagtctatcaa
aaagctataagttGCCCTAATAAGTTACTTATATAACTATAAGTTATTAG
GGCTACGTACACTTCGGTATTCCCATACTGCATTTTCCATACGATGTTCA
GAAATATATTTCTGCATTTGCAGCGACAAACTGATAATTTAAGACTTTTA
AGCAAGTAAAATCATTTCCATAGATCTGAAGACTCAAAAGAGGATGCCGT
CGACCCTAGGAGCCACACCATCAAAGAAGGGATCCTTGACAAGAATGGCC
ATGGTCTCTTCGCCTCCTTCATGTGGCAAGAAAGGTACGTCAAATTGTAT
CCTGGTCGGATGGATTACCATCGTGTCAAGGCAACCAATCATGAAGGTCC
TGCTCTGAATCAGGTTCGACTAACCTCCAATAAATGCTCTATTCGAGCAG
TTGACGAGAATACTTTGATACTCGGCACACCGAATAGAGATTATATATTT
CGAATGAGAAAGCATGCTCACGTCGACCCTCGGACTATGCTTAATGACTG
GAGATTGGCTTTTGAGAGAGCAATTCAAAAAGGTTCAAAAGAAGTCAGTT
TGGTGGACAAACGAAGATTACAACACGAAAACAGATTACCCATCAATAGA
GGTAAGTAATAGTTTCAATATTCGTTAGTCTCCTTAGTCCCCTTaggaaa
aaaatcttaaaaaaactaaatcCCCGTTAGcgcaattttcattcattaca
gCGGAGTCCAAATCGAAACACACGGCGGGGAACCCAAATTTGAGCTAAGG
ACATTTCGAGATATGGAGTAAGGTGAACAAGGCTTTGTTAACTAAAGGGA
CGAGAAGAgcttgttcgaattaaggaaatattcgagttatggaggttcga
gttaaagagactccactgtatatttTTGCCCCTCCACGTTGATAATTTCT
CACACTAGAACCAGAGCAAGAAGTCAAACTGGTTTTGATGATAATCCTTT
TGATCTTACAGAGGAGGATGACATTCTCCTCCCTCACTTTCTCCCATCTC
TTATTAAGTGATTTGCCTGAGCTCGAATGGTTGACCAAAAAGTTTCATCC
TTTGATAGACTCTGATTCGtattttattttagaatttataaaatataaaa
ttttttaactAATTAAAACTTTAAGGTAAGGAAGACGAAGTACCTCAACC
ATGTGAAGTCGGAAAGCCTTCGCCAGCAAATGAAGaaacaaagtttgaaa
atgCCCAGAATGCTGCTATTACGCAAGATGATAAATCTGAAGCTTCAGCC
ATTTCAGCTGGAAATCAACAAACAGCAAAGATAGAGAATGATTTTACAAC
CAACACAAAAGATGCCATTGGACAAGCTCTACTGTCGATAGCTACTGCCA
AAGAACCAACTTCATCCCAAAAGGCTCTTCAAAGCGATGTAACTCCATCA
CCAAAACAACCAATTCCTACATCTGAACCATCCACAACTGAAcccattca
taaaaaatcaagcACAGAGATATTGAAAGAGACACTACCTGAAGCGACCA
AATCTGAACCACAAATCAGTGCTTCAAAACCTGACGCCAGCACATCTAGA
ACGTCATCACAACCAACATCCATTGTACCTAAGCCGCCTCCTTCGCCCGG
AATTGGATCTGCCCCACCACCACCTCCGCCTGGAAGTGGATCCgccccac
caccaccaccacctccaccaccgcCGCCAGGATCATCGACAGCATCCATT
GTTCACCTTCCACCGAAGAAAGATATCATTCCAAatcgaaaaatgaaaac
tctTCCCTGGTCAAAAGTTTCGGACGCTCAAATCAATACATCATTTTGGG
GAAATGCCACAGACCGTACAAATCAAatcgattttcaaaaacttgaaaag
tcaTTTTACTTGAAATCTTCAGATACGGAGAAAAAGGGAGCTCAAGAGCA
TCACGAGTCGCCAAAAcaagagaaaaagaaatcattACTTGATCCTAAGA
AAGCACAAACAATagggattttattaaaaaatccaGAATTGGAGcttgaa
aatgtgaaaaaacgattGTCAAAATTTGATGTAAAGAAAGACGGCTCGCT
TGATGGTTTGACTTCTGAAGaaattaaagcattaaaaatctGTGTGCCAA
CTGATGATGAAAGAAAATTGTTCCATAATAAGAAAGGTATGGTGCAGTTA
AAATTGATTATCTCAATAATCTATAGTAACTTTTTCGCCCGGGGAGGGGT
ATTTGCTTTCAAAAACGACCTTATGTTTGGCCCAATAAATTAGGTCTTTG
AAATCTaatccttacagtgcagagaacaTTTAGCCAATTTGAGCAAAATG
GGTGAAAATCAACCCTTACggtccattttcttaaaaatacttGTCCATTT
GAAGGCAAAATATTTTAACATATTCCGAAATTTTTCTTCCCAAAAAACTT
CGGTATGCTCATTTTTTACACCCAGTGAACCCAtacagtgcactttttaa
aACAGACCCTTAAGAGtcgcacgtacggtaggtcatttaccttaaGTGCC
CCCAGGATTTTCCATAAGGGTGCTGCATTATGTTAAATTCAGTGGTCATC
TCAAAATTACTTTTAGTTACTTTTTAGTTTCTTTTTCAATAGACATTTTC
AGCGATGATTAAAAGTCTTGCGTCCTTTTTTTACAGTTAGAACaactttt
cagccaaattttagtttatgaaagtataatttttaataAGATTGCGAATT
CATTTTTATGATTTCAGAGAATGAACTCGTCGATGTTGACAAGTTGGTGT
TCGAGCTGACCACCATTGATCCGATCGTTTTACAAGATATGTTGGCAAAC
TTGCTTATTATCCGTGAAATCCCCGAGCAATTAAGAGGTATAAACTTGAA
ACTATTCATGATCTGAGGCCTTGTTCGCACGAAACGATTCCGCTTCGCTT
CGGAACGAAATGCAGCCATGttacttgaatgtaaccaatataATGATATT
TTGTATCTGTATCGTTAAGTGCGTCAAAGTACACTttcatttacacgttt
tttaaaaactatataagaacacaaggcttcgatggccaagaCAATAAGta
gaaattaaaaacattttatggctttgtggattctaaaacaccaaattttt
cagaaaaatatacaaaaaacttacaaaatagtgaaaaataagaatatttt
aagaacatttttaaaagtttcttttgttttcttttaataCTTTTCCGGAT
ACCCTGTCTAAACATGAAAAAACATATTGATTTCTTTTAGGTATTGAGCC
ACCAATCACAAATGTTATCAATGGTTATAAATGTTTACGAGATAGCaaag
attttaagaaactcctCGAGTATATCTTATCCATTGGCAATTATATGAAC
GGTGGTACCAAAGAGGGATGTGCTTATGGCTTTCGGCTAAGCGCGTTACT
TAAACTAGCCGAAATCAAGAGCGCAGATGAGAAAGAGTCGGTACTACAGT
TCCTAGTTGAAGAGCTTTACCATAAAGACGCCGAGGTATTTGCTTGTTAT
AAAGAGATGGGCGATCTGCTTCAAATGAGAAATATTGATGACGTTAAACC
TGAATTAAAGGGCGTCGAAACAGAGCTGGTACAACTGAAAGGTCTTAAAG
CCAGTCCTGGAGGTTTCGATGAGCAGTTTGTTGAGCAAACAAAGGAATTC
ATTAATACCCAATCAAAAGAGCTTCTACGGTTACGACAATTATGGTGTAG
CCAGGTTGAGAATCTATCTTCTCAACTTAAGAAAATGTTTGGCGAGTTCC
CGTCTTCAAATATGAAGAATTTTATGGAGATTGTCAttaggtttttgaaa
aaatacagaAGAATGGCACTTGAAGTTGAAGAGAAAGAACAATATATGCA
AAAATGGAACaaagaaaaagcaaacaaaggaCTTTGAATGTTAAAGCGAT
GGGAACCAAGACAatagcgtagacaagaggggcgcaaaatttgcgACATT
GTAATTGTCTATtgataatataaaaatataattactgtgtcataaaaatc
tccTCTCCTACACAAATATTGCGCCCTttttgtctacgctactgcatGAC
TGAATATTATTCAAGGATAACAGTTCTAAGATGTTTTTCAAAGTAATCGG
CTACCACCTACATCGTCTGGAAGAGTATGGAGACTTATCCCCTGAACTTT
TCTTTGTAAATCCCCTTATACCGATTATCTCTGTAATAATTctttaaaat
catttcaaattcaattccgggttgataaaacaaatttcaaCCATCTTTTG
GCTCATTATTCTAATTCTCTTGCCTAGGGGGTTGTATTATTTATTAGTAA
TTGCggttaaaaaaaagttggtatacTCATAATTATACTCCCTCTTCTCT
CACAGACCCattaggattttttcagctatTGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004360XLOC_004360Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007690-exon-sc0000079-1491911889:85311..85340TCONS_00007690-exon-sc0000079-1491911889:85311..85340Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1510915933:85311..85340TCONS_00007690-exon-sc0000079-1510915933:85311..85340Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1575043694:85311..85340TCONS_00007690-exon-sc0000079-1575043694:85311..85340Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1491911889:86688..87026TCONS_00007690-exon-sc0000079-1491911889:86688..87026Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1510915933:86688..87026TCONS_00007690-exon-sc0000079-1510915933:86688..87026Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1575043694:86688..87026TCONS_00007690-exon-sc0000079-1575043694:86688..87026Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1491911889:88134..88561TCONS_00007690-exon-sc0000079-1491911889:88134..88561Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1510915933:88134..88561TCONS_00007690-exon-sc0000079-1510915933:88134..88561Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1575043694:88134..88561TCONS_00007690-exon-sc0000079-1575043694:88134..88561Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1491911889:89086..90096TCONS_00007690-exon-sc0000079-1491911889:89086..90096Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1510915933:89086..90096TCONS_00007690-exon-sc0000079-1510915933:89086..90096Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1575043694:89086..90096TCONS_00007690-exon-sc0000079-1575043694:89086..90096Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1491911889:90678..90797TCONS_00007690-exon-sc0000079-1491911889:90678..90797Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1510915933:90678..90797TCONS_00007690-exon-sc0000079-1510915933:90678..90797Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1575043694:90678..90797TCONS_00007690-exon-sc0000079-1575043694:90678..90797Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1491911889:91201..92344TCONS_00007690-exon-sc0000079-1491911889:91201..92344Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1510915933:91201..92344TCONS_00007690-exon-sc0000079-1510915933:91201..92344Clytia hemisphaericaexon
TCONS_00007690-exon-sc0000079-1575043694:91201..92344TCONS_00007690-exon-sc0000079-1575043694:91201..92344Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:85311..92344 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0144287	0.00448644	0	0.0211521	0	0.0514517	0.0916038	0.0116226	0.00203139	1.49913e-05	0.38223	0.02511	0.778267	7.00904	0.000614823	0	0.00409746	6.77055e-06	7.86859e-07	1.98067e-07	3.40597	0.00063921	0.0236123	0.359361	0.184025	2.54654e-05	4.54799	0.00170378	0.0188878
Blast
[Close]
BLAST of TCONS_00007690 vs. Swiss-Prot (Human)
Match: DAAM1 (Disheveled-associated activator of morphogenesis 1 OS=Homo sapiens GN=DAAM1 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 4.610e-23
Identity = 96/369 (26.02%), Postives = 184/369 (49.86%), Query Frame = 2 
Query: 1403 PNRKMKTLPWSKVSDAQINTSFWGNATDRT--NQIDFQKLEKSF--------YLKSSDTEKKGAQ---EHHESPKQEKKKSLLDPKKAQTIGILLKNPELELENVKKRLSKFDVKKDGSLDGLTSEEIKALKICVPTDDERKLF--HNKKENELVDVDKLVFELTTIDPIVLQDMLANLLIIREIPEQLRGIEPPITNVINGYKCLRDSKDFKKLLEYILSIGNYMNGGTKEGCAYGFRLSALLKLAEIKSA-DEKESVLQFLVEELYHKDAEVFACYKEMGDLLQM---------RNIDDVKPELKGVETELVQLKGLKASPGGFDEQFVEQTKEFINTQSKELLRLRQLWCSQVENLSSQLKKMFGE 2434
            P   +K+  WSK+ + ++  + W    D      +D + LE++F        +  +S++++K A    +   S  + K+ S++D ++AQ   ILL   +L  + +K+ +   D ++D     L  + ++ L   VP   +  L   H  + + +   D+ +FE++ I+    Q  L +L   ++  E++  ++P +  + +G + +  S   K+LLE +L+ GNYMN G + G AYGF++S+L K+A+ KS+ D+  ++L +L+  + +K   V    +E+ D+ Q          + I  ++  LK VETEL   K     PG   ++FV    +FI   S     +  L  ++ ++L ++  K FGE
Sbjct:  606 PTNALKSFNWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQED-----LPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINH--YQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQR-GNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPG---DKFVSVVSQFITVASFSFSDVEDL-LAEAKDLFTKAVKHFGE 962
The following BLAST results are available for this feature:
BLAST of TCONS_00007690 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAAM14.610e-2326.02Disheveled-associated activator of morphogenesis 1... [more]
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