TCONS_00007688 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007688
Unique NameTCONS_00007688
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3078

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007688 ID=TCONS_00007688|Name=TCONS_00007688|organism=Clytia hemisphaerica|type=transcript|length=3078bp
AGTAAGTGAGGAGAAAATACTACAGTGAAAAGTAAGCATGGATGTTGCCG
ATTTGGATTTAGAGGATGGACTCATGGTAACACCAAGCGAAGCCTACGAA
TTTACCGTTCATTTATACGGCCGCAGTGATAGCACATCAACAAAATGTGT
CCTACAGATTCACTACCACGAAAAGACTTTATCGTTATTACGTCATGGAC
AAAAAGTTGAGAATTATTTGTTCAGCTCTTTGAGAGATGTCGTCGGAGAT
GATGAAGTTCCGAGATTGAAAATACGATTTGATGATTTCAATCAACTTGA
TATTGAGACTGGAACATTGGAGAAAAAGAATGAGATTTTTACATTATTAA
CACAAATCATTGATCAACAATATAGATCTGAAGACTCAAAAGAGGATGCC
GTCGACCCTAGGAGCCACACCATCAAAGAAGGGATCCTTGACAAGAATGG
CCATGGTCTCTTCGCCTCCTTCATGTGGCAAGAAAGGTACGTCAAATTGT
ATCCTGGTCGGATGGATTACCATCGTGTCAAGGCAACCAATCATGAAGGT
CCTGCTCTGAATCAGGTTCGACTAACCTCCAATAAATGCTCTATTCGAGC
AGTTGACGAGAATACTTTGATACTCGGCACACCGAATAGAGATTATATAT
TTCGAATGAGAAAGCATGCTCACGTCGACCCTCGGACTATGCTTAATGAC
TGGAGATTGGCTTTTGAGAGAGCAATTCAAAAAGGTTCAAAAGAAGTCAG
TTTGGTGGACAAACGAAGATTACAACACGAAAACAGATTACCCATCAATA
GAGGTAAGGAAGACGAAGTACCTCAACCATGTGAAGTCGGAAAGCCTTCG
CCAGCAAATGAAGaaacaaagtttgaaaatgCCCAGAATGCTGCTATTAC
GCAAGATGATAAATCTGAAGCTTCAGCCATTTCAGCTGGAAATCAACAAA
CAGCAAAGATAGAGAATGATTTTACAACCAACACAAAAGATGCCATTGGA
CAAGCTCTACTGTCGATAGCTACTGCCAAAGAACCAACTTCATCCCAAAA
GGCTCTTCAAAGCGATGTAACTCCATCACCAAAACAACCAATTCCTACAT
CTGAACCATCCACAACTGAAcccattcataaaaaatcaagcACAGAGATA
TTGAAAGAGACACTACCTGAAGCGACCAAATCTGAACCACAAATCAGTGC
TTCAAAACCTGACGCCAGCACATCTAGAACGTCATCACAACCAACATCCA
TTGTACCTAAGCCGCCTCCTTCGCCCGGAATTGGATCTGCCCCACCACCA
CCTCCGCCTGGAAGTGGATCCgccccaccaccaccaccacctccaccacc
gcCGCCAGGATCATCGACAGCATCCATTGTTCACCTTCCACCGAAGAAAG
ATATCATTCCAAatcgaaaaatgaaaactctTCCCTGGTCAAAAGTTTCG
GACGCTCAAATCAATACATCATTTTGGGGAAATGCCACAGACCGTACAAA
TCAAatcgattttcaaaaacttgaaaagtcaTTTTACTTGAAATCTTCAG
ATACGGAGAAAAAGGGAGCTCAAGAGCATCACGAGTCGCCAAAAcaagag
aaaaagaaatcattACTTGATCCTAAGAAAGCACAAACAATagggatttt
attaaaaaatccaGAATTGGAGcttgaaaatgtgaaaaaacgattGTCAA
AATTTGATGTAAAGAAAGACGGCTCGCTTGATGGTTTGACTTCTGAAGaa
attaaagcattaaaaatctGTGTGCCAACTGATGATGAAAGAAAATTGTT
CCATAATAAGAAAGAGAATGAACTCGTCGATGTTGACAAGTTGGTGTTCG
AGCTGACCACCATTGATCCGATCGTTTTACAAGATATGTTGGCAAACTTG
CTTATTATCCGTGAAATCCCCGAGCAATTAAGAGGTATTGAGCCACCAAT
CACAAATGTTATCAATGGTTATAAATGTTTACGAGATAGCaaagatttta
agaaactcctCGAGTATATCTTATCCATTGGCAATTATATGAACGGTGGT
ACCAAAGAGGGATGTGCTTATGGCTTTCGGCTAAGCGCGTTACTTAAACT
AGCCGAAATCAAGAGCGCAGATGAGAAAGAGTCGGTACTACAGTTCCTAG
TTGAAGAGCTTTACCATAAAGACGCCGAGGTATTTGCTTGTTATAAAGAG
ATGGGCGATCTGCTTCAAATGAGAAATATTGATGACGTTAAACCTGAATT
AAAGGGCGTCGAAACAGAGCTGGTACAACTGAAAGGTCTTAAAGCCAGTC
CTGGAGGTTTCGATGAGCAGTTTGTTGAGCAAACAAAGGAATTCATTAAT
ACCCAATCAAAAGAGCTTCTACGGTTACGACAATTATGGTGTAGCCAGGT
TGAGAATCTATCTTCTCAACTTAAGAAAATGTTTGGCGAGTTCCCGTCTT
CAAATATGAAGAATTTTATGGAGATTGTCAttaggtttttgaaaaaatac
agaAGAATGGCACTTGAAGTTGAAGAGAAAGAACAATATATGCAAAAATG
GAACaaagaaaaagcaaacaaaggaCTTTGAATGTTAAAGCGATGGGAAC
CAAGACAatagcgtagacaagaggggcgcaaaatttgcgACATTGTAATT
GTCTATtgataatataaaaatataattactgtgtcataaaaatctccTCT
CCTACACAAATATTGCGCCCTttttgtctacgctactgcatGACTGAATA
TTATTCAAGGATAACAGTTCTAAGATGTTTTTCAAAGTAATCGGCTACCA
CCTACATCGTCTGGAAGAGTATGGAGACTTATCCCCTGAACTTTTCTTTG
TAAATCCCCTTATACCGATTATCTCTGTAATAATTctttaaaatcatttc
aaattcaattccgggttgataaaacaaatttcaaCCATCTTTTGGCTCAT
TATTCTAATTCTCTTGCCTAGGGGGTTGTATTATTTATTAGTAATTGCgg
ttaaaaaaaagttggtatacTCATAATTATACTCCCTCTTCTCTCACAGA
CCCattaggattttttcagctatTGGGG
Run BLAST on NCBI

transcript from alignment at sc0000079:85305..92344+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007688 ID=TCONS_00007688|Name=TCONS_00007688|organism=Clytia hemisphaerica|type=transcript|length=7040bp|location=Sequence derived from alignment at sc0000079:85305..92344+ (Clytia hemisphaerica)
AGTAAGTGAGGAGAAAATACTACAGTGAAAAGTAAGGTATACTTAAGTTA CTTATTATATTGTTGGGGGTCTGGGGGATATGCGACATGGGTATGGTAAT ATGTTTTTATCGTTAGTTCATTTTTAAACAAGAATGAGCGTCAATTTTAG TGATGCTACacagaccccccccccccccNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNACCCCCCATCGTTGTGCTCAAAAACAGACACCCCATCG TTGTACTCAAAAACATAGATGTCGAAAATCCGAACTTGATGACTGACTGG ATTATATTTTCGAATTCTCGAGTGAGGAGGTACACACATTTTCTTGAGTT CCACAAACCACGAGATTCTGAAGAGAATACCTGTTTCATCAAGTAAATTT ATTGGTGTGCATctcttaaaaaattttttcctagTCACATCGTTAtacta gttttttttttcaagtactCACTGCcttcgttttgtataagattcccaat tactgcactaagattcttgtcacttttccggGATCTTTCCACTATTTTTC TTAGGATAACtggcatgagattggaaaggttttgtttctaaaggtacgga aaattTTGTGTTTACTCACGAAACTGACTAACTTTCTGAagcttattttt tcaaataccCGGAGTCCTGCTCTTTTTCCGatagaaaagtggcaaaggaa tctttgaacggaaatgggaatcttatacaaaactaCGGTATTTCGAATTG TCATACTCTTTCGCTAGAGGATAAGCAGAAGCCTGTTTGTACTCACTACA TGTCTAAGCACTTCCCTTTCTTGTAAAACTTCTTACTAAAACAAATGCCA TCATTTCGTCTATGTATCTCGTCATTAAGCTGTAACTAAGGTAACGCTTG ACTTTGATATTATAATCCATGTTGATTTAATATGAAGGTTTGATGATTGT TTATACTGCTTGTATGTTTGATGTTGTGAGCGATATAAGTTATGTTCTGT CACTTAGTCAGTTGTTTCATCGGAACTAGTCCGACCAAAGTATTTGAAAC AGGTGTGTTTTGTACTTTGTACTATGCTTTTAGCTGGAGAACTACATTAT GAGCAGTTTccaggatttttatttttagtttgaaggtttttttttggtaa aaagttTGTCTGTTTGCTTACCCATCAATATTAAACTAAAGGTTATCTGT TTACTGAATTGCCACAAATCTTTGttggaaaaacgaaaaaaagccGTTTT GAATAAACCAATAAGGAAGTTTCTTGACTGATATGAAATACCATGTCTAA TCTAAAACGGAAATTTTCTCTTGTTTACTTTAGCATGGATGTTGCCGATT TGGATTTAGAGGATGGACTCATGGTAACACCAAGCGAAGCCTACGAATTT ACCGTTCATTTATACGGCCGCAGTGATAGCACATCAACAAAATGTGTCCT ACAGATTCACTATCACGAAAAGACTTTATCGTTATTACGTCATGGACAAA AAGTTGAGAATTATTTGTTCAGCTCTTTGAGAGATGTCGTCGGAGATGAT GAAGTTCCGAGATTGAAAATACGATTCGATGATTTCAATCAACTTGATAT TGAGACTGGAACATTGGAGAAAAAGAATGAGATTTTTACATTATTAACAC AAATCATTGATCAACAATATAGGTAGGATTATAGTTCTTGTATATATACT TTCTTTTATAAGGGTTAATCATATAGGAANTACGGCCGTAGTAATAGCAC ATCAACAAAATGTGTCCTACAGATTCACTACCACGAAAAGACTTTATCGT TATTACGTCATGGACAAAAAGTTGAGAATTATTTGTTCAGCTCTTTGAGA GATGTCGTCGGAGATGATGAAGTTCCGAGATTGAAAATACGATTTGATGA TTTCAATCAACTTGATATTGAGACTGGAACATTGGAGAAAAAGAATGAGA TTTTTACATTATTAACACAAATCATTGATCAACAATATAGGTAGGATTAT AGTTCTTGTATATATACTTTCTTTTATAAGGGTAAATCATATAGGAACAA GACAAGGGGCTGAATTTGAACTAACGACTAAGAAAAAATCGAAAGGAAGC GTccaatttcagaaattttcgaaATGCATTCTGAATATTGTaagcatttt aagaacattataaaaaCACTAACAAATATAAGAATAGCTCACCCTTAGTC ATATTTACTGGTTCTTACGAAAAACGCGTATTCCAATCTAATATAACATT TTGAATAACTTGAAACAGAATTGCGTACAttttagactagagtctacttc tggctgaactttgtgAAGAACAGTGAAGCAGACTAGAGGATTTCGCCATC TTAAAtcttttcactttcattttcaaaaattatatgaaaacatcaaaaca ataaaatgttttctaaaattccATCGaagtttatgaaactataatgaaaa ggagaaaatacctccaaaatttcaaaacattcgttTATTGGTCATGGTTT TCTGTTTGATCTTGTGGCATgtatttgctaccacctcaagcaaagcaaaa aaataaagtcGGCCAAATTACACCGGGCTACTTATCAgtgccatccagtc tatcaaaaagctataagttGCCCTAATAAGTTACTTATATAACTATAAGT TATTAGGGCTACGTACACTTCGGTATTCCCATACTGCATTTTCCATACGA TGTTCAGAAATATATTTCTGCATTTGCAGCGACAAACTGATAATTTAAGA CTTTTAAGCAAGTAAAATCATTTCCATAGATCTGAAGACTCAAAAGAGGA TGCCGTCGACCCTAGGAGCCACACCATCAAAGAAGGGATCCTTGACAAGA ATGGCCATGGTCTCTTCGCCTCCTTCATGTGGCAAGAAAGGTACGTCAAA TTGTATCCTGGTCGGATGGATTACCATCGTGTCAAGGCAACCAATCATGA AGGTCCTGCTCTGAATCAGGTTCGACTAACCTCCAATAAATGCTCTATTC GAGCAGTTGACGAGAATACTTTGATACTCGGCACACCGAATAGAGATTAT ATATTTCGAATGAGAAAGCATGCTCACGTCGACCCTCGGACTATGCTTAA TGACTGGAGATTGGCTTTTGAGAGAGCAATTCAAAAAGGTTCAAAAGAAG TCAGTTTGGTGGACAAACGAAGATTACAACACGAAAACAGATTACCCATC AATAGAGGTAAGTAATAGTTTCAATATTCGTTAGTCTCCTTAGTCCCCTT aggaaaaaaatcttaaaaaaactaaatcCCCGTTAGcgcaattttcattc attacagCGGAGTCCAAATCGAAACACACGGCGGGGAACCCAAATTTGAG CTAAGGACATTTCGAGATATGGAGTAAGGTGAACAAGGCTTTGTTAACTA AAGGGACGAGAAGAgcttgttcgaattaaggaaatattcgagttatggag gttcgagttaaagagactccactgtatatttTTGCCCCTCCACGTTGATA ATTTCTCACACTAGAACCAGAGCAAGAAGTCAAACTGGTTTTGATGATAA TCCTTTTGATCTTACAGAGGAGGATGACATTCTCCTCCCTCACTTTCTCC CATCTCTTATTAAGTGATTTGCCTGAGCTCGAATGGTTGACCAAAAAGTT TCATCCTTTGATAGACTCTGATTCGtattttattttagaatttataaaat ataaaattttttaactAATTAAAACTTTAAGGTAAGGAAGACGAAGTACC TCAACCATGTGAAGTCGGAAAGCCTTCGCCAGCAAATGAAGaaacaaagt ttgaaaatgCCCAGAATGCTGCTATTACGCAAGATGATAAATCTGAAGCT TCAGCCATTTCAGCTGGAAATCAACAAACAGCAAAGATAGAGAATGATTT TACAACCAACACAAAAGATGCCATTGGACAAGCTCTACTGTCGATAGCTA CTGCCAAAGAACCAACTTCATCCCAAAAGGCTCTTCAAAGCGATGTAACT CCATCACCAAAACAACCAATTCCTACATCTGAACCATCCACAACTGAAcc cattcataaaaaatcaagcACAGAGATATTGAAAGAGACACTACCTGAAG CGACCAAATCTGAACCACAAATCAGTGCTTCAAAACCTGACGCCAGCACA TCTAGAACGTCATCACAACCAACATCCATTGTACCTAAGCCGCCTCCTTC GCCCGGAATTGGATCTGCCCCACCACCACCTCCGCCTGGAAGTGGATCCg ccccaccaccaccaccacctccaccaccgcCGCCAGGATCATCGACAGCA TCCATTGTTCACCTTCCACCGAAGAAAGATATCATTCCAAatcgaaaaat gaaaactctTCCCTGGTCAAAAGTTTCGGACGCTCAAATCAATACATCAT TTTGGGGAAATGCCACAGACCGTACAAATCAAatcgattttcaaaaactt gaaaagtcaTTTTACTTGAAATCTTCAGATACGGAGAAAAAGGGAGCTCA AGAGCATCACGAGTCGCCAAAAcaagagaaaaagaaatcattACTTGATC CTAAGAAAGCACAAACAATagggattttattaaaaaatccaGAATTGGAG cttgaaaatgtgaaaaaacgattGTCAAAATTTGATGTAAAGAAAGACGG CTCGCTTGATGGTTTGACTTCTGAAGaaattaaagcattaaaaatctGTG TGCCAACTGATGATGAAAGAAAATTGTTCCATAATAAGAAAGGTATGGTG CAGTTAAAATTGATTATCTCAATAATCTATAGTAACTTTTTCGCCCGGGG AGGGGTATTTGCTTTCAAAAACGACCTTATGTTTGGCCCAATAAATTAGG TCTTTGAAATCTaatccttacagtgcagagaacaTTTAGCCAATTTGAGC AAAATGGGTGAAAATCAACCCTTACggtccattttcttaaaaatacttGT CCATTTGAAGGCAAAATATTTTAACATATTCCGAAATTTTTCTTCCCAAA AAACTTCGGTATGCTCATTTTTTACACCCAGTGAACCCAtacagtgcact ttttaaaACAGACCCTTAAGAGtcgcacgtacggtaggtcatttacctta aGTGCCCCCAGGATTTTCCATAAGGGTGCTGCATTATGTTAAATTCAGTG GTCATCTCAAAATTACTTTTAGTTACTTTTTAGTTTCTTTTTCAATAGAC ATTTTCAGCGATGATTAAAAGTCTTGCGTCCTTTTTTTACAGTTAGAACa acttttcagccaaattttagtttatgaaagtataatttttaataAGATTG CGAATTCATTTTTATGATTTCAGAGAATGAACTCGTCGATGTTGACAAGT TGGTGTTCGAGCTGACCACCATTGATCCGATCGTTTTACAAGATATGTTG GCAAACTTGCTTATTATCCGTGAAATCCCCGAGCAATTAAGAGGTATAAA CTTGAAACTATTCATGATCTGAGGCCTTGTTCGCACGAAACGATTCCGCT TCGCTTCGGAACGAAATGCAGCCATGttacttgaatgtaaccaatataAT GATATTTTGTATCTGTATCGTTAAGTGCGTCAAAGTACACTttcatttac acgttttttaaaaactatataagaacacaaggcttcgatggccaagaCAA TAAGtagaaattaaaaacattttatggctttgtggattctaaaacaccaa atttttcagaaaaatatacaaaaaacttacaaaatagtgaaaaataagaa tattttaagaacatttttaaaagtttcttttgttttcttttaataCTTTT CCGGATACCCTGTCTAAACATGAAAAAACATATTGATTTCTTTTAGGTAT TGAGCCACCAATCACAAATGTTATCAATGGTTATAAATGTTTACGAGATA GCaaagattttaagaaactcctCGAGTATATCTTATCCATTGGCAATTAT ATGAACGGTGGTACCAAAGAGGGATGTGCTTATGGCTTTCGGCTAAGCGC GTTACTTAAACTAGCCGAAATCAAGAGCGCAGATGAGAAAGAGTCGGTAC TACAGTTCCTAGTTGAAGAGCTTTACCATAAAGACGCCGAGGTATTTGCT TGTTATAAAGAGATGGGCGATCTGCTTCAAATGAGAAATATTGATGACGT TAAACCTGAATTAAAGGGCGTCGAAACAGAGCTGGTACAACTGAAAGGTC TTAAAGCCAGTCCTGGAGGTTTCGATGAGCAGTTTGTTGAGCAAACAAAG GAATTCATTAATACCCAATCAAAAGAGCTTCTACGGTTACGACAATTATG GTGTAGCCAGGTTGAGAATCTATCTTCTCAACTTAAGAAAATGTTTGGCG AGTTCCCGTCTTCAAATATGAAGAATTTTATGGAGATTGTCAttaggttt ttgaaaaaatacagaAGAATGGCACTTGAAGTTGAAGAGAAAGAACAATA TATGCAAAAATGGAACaaagaaaaagcaaacaaaggaCTTTGAATGTTAA AGCGATGGGAACCAAGACAatagcgtagacaagaggggcgcaaaatttgc gACATTGTAATTGTCTATtgataatataaaaatataattactgtgtcata aaaatctccTCTCCTACACAAATATTGCGCCCTttttgtctacgctactg catGACTGAATATTATTCAAGGATAACAGTTCTAAGATGTTTTTCAAAGT AATCGGCTACCACCTACATCGTCTGGAAGAGTATGGAGACTTATCCCCTG AACTTTTCTTTGTAAATCCCCTTATACCGATTATCTCTGTAATAATTctt taaaatcatttcaaattcaattccgggttgataaaacaaatttcaaCCAT CTTTTGGCTCATTATTCTAATTCTCTTGCCTAGGGGGTTGTATTATTTAT TAGTAATTGCggttaaaaaaaagttggtatacTCATAATTATACTCCCTC TTCTCTCACAGACCCattaggattttttcagctatTGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004360XLOC_004360Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007688-exon-sc0000079-1491911889:85305..85340TCONS_00007688-exon-sc0000079-1491911889:85305..85340Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1510915933:85305..85340TCONS_00007688-exon-sc0000079-1510915933:85305..85340Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1575043694:85305..85340TCONS_00007688-exon-sc0000079-1575043694:85305..85340Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1491911889:86688..86786TCONS_00007688-exon-sc0000079-1491911889:86688..86786Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1510915933:86688..86786TCONS_00007688-exon-sc0000079-1510915933:86688..86786Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1575043694:86688..86786TCONS_00007688-exon-sc0000079-1575043694:86688..86786Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1491911889:87105..87344TCONS_00007688-exon-sc0000079-1491911889:87105..87344Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1510915933:87105..87344TCONS_00007688-exon-sc0000079-1510915933:87105..87344Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1575043694:87105..87344TCONS_00007688-exon-sc0000079-1575043694:87105..87344Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1491911889:88134..88561TCONS_00007688-exon-sc0000079-1491911889:88134..88561Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1510915933:88134..88561TCONS_00007688-exon-sc0000079-1510915933:88134..88561Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1575043694:88134..88561TCONS_00007688-exon-sc0000079-1575043694:88134..88561Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1491911889:89086..90096TCONS_00007688-exon-sc0000079-1491911889:89086..90096Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1510915933:89086..90096TCONS_00007688-exon-sc0000079-1510915933:89086..90096Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1575043694:89086..90096TCONS_00007688-exon-sc0000079-1575043694:89086..90096Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1491911889:90678..90797TCONS_00007688-exon-sc0000079-1491911889:90678..90797Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1510915933:90678..90797TCONS_00007688-exon-sc0000079-1510915933:90678..90797Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1575043694:90678..90797TCONS_00007688-exon-sc0000079-1575043694:90678..90797Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1491911889:91201..92344TCONS_00007688-exon-sc0000079-1491911889:91201..92344Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1510915933:91201..92344TCONS_00007688-exon-sc0000079-1510915933:91201..92344Clytia hemisphaericaexon
TCONS_00007688-exon-sc0000079-1575043694:91201..92344TCONS_00007688-exon-sc0000079-1575043694:91201..92344Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:85305..92344 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00270425 0.00101901 0.000682452 0.00174458 0 0.00242481 0.00256634 0.0069474 1.90531 3.19492 0.250009 1.11705 4.74743 0.380092 4.67176 6.28634 0.281608 1.57361 6.66445 8.11458 6.9829e-08 1.18276 0.000142059 0.000267614 0.0621204 6.57949 3.20691 0.997742 0.000216263 0.0236316
Blast
BLAST of TCONS_00007688 vs. Swiss-Prot (Human)
Match: DAAM1 (Disheveled-associated activator of morphogenesis 1 OS=Homo sapiens GN=DAAM1 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 4.626e-23
Identity = 96/369 (26.02%), Postives = 184/369 (49.86%), Query Frame = 2
Query: 1409 PNRKMKTLPWSKVSDAQINTSFWGNATDRT--NQIDFQKLEKSF--------YLKSSDTEKKGAQ---EHHESPKQEKKKSLLDPKKAQTIGILLKNPELELENVKKRLSKFDVKKDGSLDGLTSEEIKALKICVPTDDERKLF--HNKKENELVDVDKLVFELTTIDPIVLQDMLANLLIIREIPEQLRGIEPPITNVINGYKCLRDSKDFKKLLEYILSIGNYMNGGTKEGCAYGFRLSALLKLAEIKSA-DEKESVLQFLVEELYHKDAEVFACYKEMGDLLQM---------RNIDDVKPELKGVETELVQLKGLKASPGGFDEQFVEQTKEFINTQSKELLRLRQLWCSQVENLSSQLKKMFGE 2440
            P   +K+  WSK+ + ++  + W    D      +D + LE++F        +  +S++++K A    +   S  + K+ S++D ++AQ   ILL   +L  + +K+ +   D ++D     L  + ++ L   VP   +  L   H  + + +   D+ +FE++ I+    Q  L +L   ++  E++  ++P +  + +G + +  S   K+LLE +L+ GNYMN G + G AYGF++S+L K+A+ KS+ D+  ++L +L+  + +K   V    +E+ D+ Q          + I  ++  LK VETEL   K     PG   ++FV    +FI   S     +  L  ++ ++L ++  K FGE
Sbjct:  606 PTNALKSFNWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQED-----LPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINH--YQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQR-GNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPG---DKFVSVVSQFITVASFSFSDVEDL-LAEAKDLFTKAVKHFGE 962          
The following BLAST results are available for this feature:
BLAST of TCONS_00007688 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAAM14.626e-2326.02Disheveled-associated activator of morphogenesis 1... [more]
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