|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007625 ID=TCONS_00007625|Name=TCONS_00007625|organism=Clytia hemisphaerica|type=transcript|length=795bp tttagtgataaatatacaaaaaatcagaacagcaatattttataaaacat GTTTGGTGAGAAAGCATTTGAATTGATCAAAGAATTGAAAAGATCTACTG ATGGAAACCTACCAGCATTTAATGAGGACTTGGTACGTCAAGTGTTGGAT GAAATGAGGGttttattcgaagaaaatcaaaaagaagtcacAGCGTCCGT GGAAGGGGAAGAAGGTTTATACTCAGGTGTTCAATTACGTCACGAAAGTT TGGAGCGAAACAAAAGATGTCTGCTAGCATACATATACAACCGAATGATG AGGATAAAACAATACCGTTGGGATATTGGGAGTGTCCTCCCACAAGACGT CAAACTGAATCTCGTCGAACAAGAGgtGAAATGGTTTACAGAGTACAACA AATCGCTAGCAAAATATATGATGTCGACTGCTGGTGGTCATGGTATCGAC TTAACACAGAATATGACTCCACCAAAATCACTTTACATTGAGGTGCGTTG TTTGGTGGATTACGGAGAATTCGAAACGGAAGATGGAACCGTTGTCATCC TCAAAAAGAATAGCCAGcatttcctCCCAACAACGCAATGTGAACATTTA GTACGTCAAGGAATTCTTGAACATATTTTAGCataatttttctataagaa aattTAGATTTAGAATTTTGTGTAAATATTTATATCGGAAAGCAAGAGAA TATTTATTAAATGGTTTTTAAACGTCTTGtgtgtgatttcttttttttgg ggGTGTAGGGTTAAATTCAGGATAGTAAGAGATAGCAGAGGGGCA Run BLAST on NCBI transcript from alignment at sc0000078:530030..540146- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007625 ID=TCONS_00007625|Name=TCONS_00007625|organism=Clytia hemisphaerica|type=transcript|length=10117bp|location=Sequence derived from alignment at sc0000078:530030..540146- (Clytia hemisphaerica) TTTAGTGATAAATATACAAAAAATCAGAACAGCAATATTTTATAAAACAT
GTTTGGTGAGAAAGCATTTGAATTGATCAAAGAATTGAAAAGATCTACTG
ATGGAAACCTACCAGCATTTAATGTAAGAATCATTATATTCAATGTATAC
GATAATCTCAAGCTTCAAAATGAGATAATCACTTTTTTAATCTTTGTTCA
AATCAGTCTTCATTGTGCAGATGTCAATTTTAAAATCATTTCATAACTGT
GCGAAAGGGGGTTAGGTTCCACTTTACTATGATTGACATAAAGTAGTTCA
ATTTATGGATTGGTACCATCATTGACGATACTGACGTCATCATTCAACCC
CAGTACACTTGAACCCAGCCTTCTTTTAGATCTAGGGCTGATATAGCTAA
GAATATTGGAACAGGTTTTCCTTTTGAACTACAGTTGACGCTCTCGCGCT
CTCTAACTCGGCGTTTTACTTTTTGGTACGCTCCATTATTCGATGGTATT
GAAAGTCACCATCAACAAGAAACTCTTATAAACGACACTAAACTATTCGA
TACACTCTATTTCGATAAAAAACAAATTCCTCTTGAAAATCGAATTAGAG
AGCGTCAACTGTATATAGGTTAATTCGAATATTTCTTTCTTTACCAGGAG
GACTTGGTACGTCAAGTGTTGGATGAAATGAGGGTTTTATTCGAAGAAAA
TCAAAAAGAAGTGTAAGTAATATACCTGGGTTGGTAGCTTTTTTTTTTCA
AAAGCTGAACCCACAGAACAGCTTGTTCAATATATACAATACAAGCAATG
ATGAGCTTGAATTGTACATTTTTGGTGCTCATAATAAAAAGCACAGAATT
TTGTTTTCGCATTGACAAGATGGCTAGTGGTCTAAGTTTTTGGAGGTTTT
TGCGTCTAGACGGATGGTCGTAATGACAGCTTGATATGTCCCGAAAATTC
ATTCCGACTGTGAAGCAGTCTTTTCTCACCCACTAGTTGATAGAAACACT
TAAAGTTTTTTTTTTTCAATTTCAGCACAGCGTCCGTGGAAGGAGAAGAA
GGTTTATACTCAGGTGTTCAATTACGTCACGAAAGTTTGGAGCGAAACAA
AAGATGTCTGCTAGCATACATGTAAGGTCAAAATGTGTCTATACTGAGCA
AGAGGCCTTTATCTGGTTATTGAATCAAGTTTCGATATGCCTAAGGGTTT
GTTTATTTTAAACACTGGTAATCTTAGATTTGTCCAAATTTGTTGTTTTT
TTCCCAATACAGGGAAGCGTAAATGAGTCAATTACAGTCAACCTACTGAC
TCAAACCTGTACTGCTCGAATGGCTCCACACCNTTTTCTTTACCAGGAGG
ACTTGGTACGTCAAGTGTTGGATGAAATGAGGGTTTTATTCGAAGAAAAT
CAAAAAGAAGTGTAAGTAATATACCTGGGTTGGTAGCATTTTTTTTTTTT
CAAAAGCTGACCCCACAGAACAGCTTGTTCAATATATACAATACAAGCAA
TGATGAGCTTGAATTGTACATTTTTGGTGCTCATAATAAAAAGCACAGAA
TTTTGTTTTCGCATTGACAAGATGGCTAGTGGTCTAAGTTTTTGGAGGTT
TTTGCGTCTAGACGGATGGTCGTAATGACAGCTTGATATGTCCCGAAAAT
TCATTTCGACTGTGAAGCAGTCTTTTCTCACCCACTAGTTAATAGAAACA
CTTAAAGTTTTTTTTTCAATTTCAGCACAGCGTCCGTGGAAGGGGAAGAA
GGTTTATACTCAGGTGTTCAATTACGTCACGAAAGTTTGGAGCGAAACAA
AAGATGTCTGCTAGCATACATGTAAGGTCAAAATGTGTCTATACTAAGCA
AGAGGCCTTTATCTGGTTATTGAATCAAGTTTCGATATACCTAAGGGTTT
GTTTATTTTAAACACTGGTCATCTTAGATTTGTCCAAATTTGTTGTTTTT
TCCAATACAGGGAAGCGTAAATGAGTCAATTACAGTCAACCTACTGACTC
GAACCTGTACAGCTCGAATGTCTCCACACCTCAGTGGGCTTTTCTGTTTC
CCTGAGGTCTTCGTGTCATGACAATTCGATATGAAGATTCTTTTTTATAC
AATTTTCTCTGCGTTTTTCACCACCAGATACAACCGAATGATGAGGATAA
AACAATACCGTTGGGATATTGGGAGTGTCCTCCCACAAGACGTCAAACTG
AATCTCGTCGAACAAGAGGTATAGGGATATAGGCAATACTCATGGGGAAC
GCTAATTCGTCCTATTGCTGCTATTGCTGAGAATTTGATTGAGTAGATAT
TTATTATTCATGTAACCTCTCCCTTCTCCACAGGCTCAAAGCTTGATCCA
CCCCTTTTAGGAAAGTTCTTAATACATCAACTCCTTTCGCCAAAAAGAAA
TTCAGGGTTTGAGCTTGTGCCTGTACTATGGAGCGATCAATGAATTCACT
CAATTCATTAAGTGTCGCTAGCGTCATATGAAATCGTTCACTTTTTTTGG
TTCTGTACCGGTGGGTTTAGACCTAAGAGCACTGTCTTCCATGCCTCCAT
GTTTTTTACCTCGCCCGTTTTTTACCCGGCCTGAATAAAAATTTAGAATT
TACATTTTTTACTTGGTTTGGGTGTATTTAATCTGAAGTGGCATTTAATT
GGTCAATGATGCAAAAGAAAGGAATAGCAGTTTCTTAATTGAAGGATAGG
TTTAAAAAGACCATAAAACTCAAACCATCCTCTGCAGTACATGCAAAATA
TTTTATATCTTGGATTTCGTTTTTTCTTTTTCCAGGTGAAATGGTTTACA
GAGTACAACAAATCGCTAGCAAAATATATGATGTCGACTGCTGGTGGTCA
TGGTATCGACTTAACACAGGTGTGTATCTACAAGTTTACCTCTACCGCTT
GACAGATTTGGGGTTAAATATATGTCAAATGTCTGAATAGCAGACCTCTA
TAGATGTATTAACTGTAAAAGAAACTCTTTTTGCTGTGAAAAGAAGCCTA
GGAATTAAATTTCTCAAATATATCAACTGATTGACTAGTCTGATTTGCAG
ACCATTAGATATGCTTCCTATAAGACATTTTTTTCGTTAGAAGATACGCA
GAAGCATACTTCGGGATTGATAGAGAACGATGGTCAGTTTTAAGTGCAGT
GTTTTTTACATTAAGGTTCACAATTTGACGATGAGGTTTTTTTCTTTCTG
TTTCAGAATATGACTCCACCAAAATCACTTTACATTGAGGTACGATCTTT
TGTTTCTATTTTTTTTGTTTCTTCTTTTCCCCTCCATGTAAAAAAAAATT
TCCAACGACACATTAACGCTGATAATTTGATTTTAATATCTGGGGATTTT
AAGGAATTTTTTACCAGACCGCGTCACGGATTTTGAAGCGGGAGACTTGA
ACCCTAGCCCTCGTTTTCAGGGATTTCGGGCAAATCTGAAATATTTTCAG
GCTTAAGCGTCTTGGAATGCAGGACATAAAAGTTCGGCTATCATTCCCCT
CCGATGGGAAATCGACACGCTTTAGTGTGGTGGCCACTATTCCATCGATC
CGCCATCGTAATATCAGATAAGGACGGTCGCGGATCCACCATTGAGATAA
CCTCCTAACTAGCACAGAACGCCAGCTTTGTTTCAACGTTCATATATAAC
GCCATTTGGGAGTTTGGGGTGTCAGAAGCAGCCGGCGGAGAGATTTTTTA
GAAAATATGTGTTTTTATCTTCTAGGACACCACATTTTATGACCTCCAAT
TTTCTTTTACAAATGATGTGTTCTAAAATCTAGAAAAAACATTTTGCCAA
GATATACTTTAAGATATTTGTTTTTTTCCACGAACCAAAGATGTGTTCTG
AAACCTTAGGGTTAATAGGCAACAAGATCACATCAATTTTCTCTTGATTA
TACCCCTGTCTTTTTAAAGGTTGTGTTCTGAAGCTTTCTAGGGTTACCTA
GACAACAAGAACAATTTTGATGACCTTGATTATACCCCTGTCTCGTCAGA
ACACATCATTATTTCTAGCTGAAACATACTCTCAGAACACATCGGAAAAA
AAGGTCGCTTCGCCGGCTGCTTTCGGGGTTTGTCCCATAAGCTAGAAAGG
GCTCGAATCAATTTAAAAGGCTAAGGGTAATTGTCCTAGAGGGTAATCGT
CCGGGTGCATTTCAGGAGCAAAGATCCCTAGTGACAATTTTCTGAGGGAG
GGGGCAATCCATTGAGTCTAAAACCCGAAGGGCTAGATTTCAAAATATGC
AGCCCTCTAAAACAAAGGAACCGCTAGATACAACCTGTCCTCGTGATCGC
GGCGCGTTCTAGGCTTGTTCTGTATGTGAAGTAAGTGTCTTCACTTTTTC
TTGCCTGGGAAGGGTTAGAGATTCTACTCTAGCCCTTCGGGTTTTAAACT
CAATGCTACAAACCCCCCCATTTAGGTTCTCTATGAAAAAGTAAAATGGT
ATCTACAACCTCGTGTACAATATTCTTCATGCATCACGTTTAACACATCG
TTGTACAGCAGATACCCCCCTGCTTGACCTCGTTATTTTATGGTCAATTT
TTCTCATTTTGAATATTATGCGAAATTTTCGACTTCCGAGTCGTCTTGTT
AATTTCGCCTAGCGAAAGTATTACAATCAGCTTTCGTGGGTCGTCGCGGG
TCGGAAAAAAAATTAGAAAACGAAAGTACTTGATACGGTGGACTAAAATT
AATTTACAAATTACACGCTCGTATAACCACGGACGATTTTCGTAGGTTTT
CTTTGGATTACGTCATATATCTTTGTGTCTTTAGCTTCACAGTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTGATAGACGGTGATATACCTTTTGGATAGACGGTG
ACATACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGACGGCGCTC
AATATGAGCATGTTCATTTTTCCTATAAACATTTACTTTATAAGAATCAA
ATCAATAACTCTCGATAGACAGTGGTATACCTTTCAGATTAGTTTTTACA
AAGTAAACAAGGGACGGTGCTCAATATGAGCTTATTCATTTTTCTTATAA
GCATTTACTTTATAAGAATCAAATCAATAACTCTCGATAGACGGTGGTAT
ACCTTTCGGTAATTAGTTGTTACAAAGTAAACAAAGGACGGTGCACAATA
TAAGCATATTTATTTTTCTTATAAGCATATACTTTATAAGAATTAAATCA
ATAGCTCTTGATAGACGGTGACATACCTTTCGGTAATTAGTTGTTACAAA
GTAAACAAAGGACGGTGCACAATATAAGCATATTTATTTTTCTTATAAGC
ATATACTTTATAAGAATTAAATCAATAGCTCTTGATAGACGGTGACATAC
CTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGGACCGCGCTGCTCAA
TATGAGTATATTCATTTTTCTTATAAGCATTTACTCATAAGAATCAAATC
AAAAACTCTCGATAGACGATGATATACCTTTTGGTAATTAGTTCTTACAA
AGTAAACAAGGGATGACGCATGATATGAACATATTTATTTTTCTTGTAAG
CATATACTTTATAAGAATCAAATCAATAACTCTTGAAAGACGGTGATATA
CCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGGACCGCGCTGCTCA
ATATGAGTATATGCATTTTTCTTATAAGCGTTTACTTTATAAGAATCAAA
TCAATAACTCTTGAAAGACGGTGATATACCTTTCGGTAATTAGTTCTTAC
AAAGTAAACAAGGGACGGAGCACAGTTTGAGCATATTCATTTTTCTTATA
AGCGTTTACTTTATAAGAATAAAATCAATAACTCTTGATAGACGGTGATA
TACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGATGGCGTGCAAT
ATGAGCATATTTACTTTTTATAAGCATATACTTTATAAGAGTTCTTAAAA
GTCAAACAACAATTGTTCTTAAATTGGTCTTATTTTTTAGTGATTTTAAG
CCTCGTTGTTCTTGTGAAATTGTTTCATCAAGGCTCGATGTAAAGTAGAT
CTCTACTTCTTGTTTTTCCCATGCAGTTCAAATTCTAGGCGAAATTTTCG
ACTTTAAGTCGTCTTGTTTTACTTCCTTTTGGACCTACCCCGGTGGGCTT
TAAACTCAACGGGATTGCCCCATTGTCCTAGGGGTAAATGTCCAAAATCG
TATTTTTAGAGCTTTTTCTTTATTGGAGTTGTGTGTATTTCGCACATCTT
ATCATGGACAATTTCGACCTTAATATGATGATCCATTCTGGACAATTTAC
CACCATCAAAGATGTATTTCTACTGTCTTTAGATAAGTCAGTCGTCATAG
TAGAGGCTACGTCGATGATATTGAAAGTCATCGTCAACAAAAAGCTCTCA
AACACCGCTCCTACCTTCGATATACTTTCTTGGTTTCGTTTGAATTCGGT
GAAAATCGAATTAGAGAGCGTCAACTATATTTTCTCATTTTTTGTTAGGT
GCGTTGTTTGGTGGATTACGGAGAATTCGAAACGGAAGATGGAACCGTTG
TCATCCTCAAAAAGAATAGCCAGGTAGGAAAGGTCAAATTGTACCTTTTA
AAATCTTCATACTTTTGCAAAATTTGTTTGAGAGTCCACTGAAATCTCGA
TTGTTTTCAACCCAAAGGTGAGAAGAGTGGTCTATTATTTTACCAAAAAA
AGGTATTATGAGTTTACGGATAAGAATTTTCTTTTGAATCAACAAAAGAT
TTTCATCATCAAACTCACAATATCCTGTCAAATATGTATAACTTCTTTTT
AGTGCACCCGGTGTAGTATCTAGGTTTGGTTCTAGCCTCTTATAACCTCA
AATAATATAACACTTGGTAATAAACTTTTCTTTTAAGAACATCCAAAAAA
ATTTTAAGCCTTAAAATGTTCTTAAATTGTTCTTTATTTCACCTTTTTAT
GGATATTTTATGTTTAATTTCCTAATAAATCGATTGTGATTTTAGAGTCC
GCAAAGCCTTGAATGTTTTTAACTTGTTCTTAATATTCTGCCCATTTAAG
CATTATTTTCTTATATACTGTAGTTTGTTCTCATAAAGAACTTGTAAACA
TAATGGAATTGGAAGGTAATGATTTTCTTTATTTTTCAGCATTTCCTCCC
AACAACGCAATGTGAACATTTAGTACGTCAAGGAATTCTTGAACATATTT
TAGCATAATTTTTCTATAAGAAAATTTAGATTTAGAATTTTGTGTAAATA
TTTATATCGGAAAGCAAGAGAATATTTATTAAATGGTTTTTAAACGTCTT
GTGTGTGATTTCTTTTTTTTGGGGGTGTAGGGTTAAATTCAGGATAGTAA
GAGATAGCAGAGGGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00007625-exon-sc0000078-1575043694:540024..540146 | TCONS_00007625-exon-sc0000078-1575043694:540024..540146 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1575043694:538736..538800 | TCONS_00007625-exon-sc0000078-1575043694:538736..538800 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1575043694:538326..538421 | TCONS_00007625-exon-sc0000078-1575043694:538326..538421 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1575043694:537929..538019 | TCONS_00007625-exon-sc0000078-1575043694:537929..538019 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1575043694:537278..537361 | TCONS_00007625-exon-sc0000078-1575043694:537278..537361 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1575043694:536908..536940 | TCONS_00007625-exon-sc0000078-1575043694:536908..536940 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1575043694:530824..530898 | TCONS_00007625-exon-sc0000078-1575043694:530824..530898 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1575043694:530030..530257 | TCONS_00007625-exon-sc0000078-1575043694:530030..530257 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1510915933:540024..540146 | TCONS_00007625-exon-sc0000078-1510915933:540024..540146 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1510915933:538736..538800 | TCONS_00007625-exon-sc0000078-1510915933:538736..538800 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1510915933:538326..538421 | TCONS_00007625-exon-sc0000078-1510915933:538326..538421 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1510915933:537929..538019 | TCONS_00007625-exon-sc0000078-1510915933:537929..538019 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1510915933:537278..537361 | TCONS_00007625-exon-sc0000078-1510915933:537278..537361 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1510915933:536908..536940 | TCONS_00007625-exon-sc0000078-1510915933:536908..536940 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1510915933:530824..530898 | TCONS_00007625-exon-sc0000078-1510915933:530824..530898 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1510915933:530030..530257 | TCONS_00007625-exon-sc0000078-1510915933:530030..530257 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1491911889:540024..540146 | TCONS_00007625-exon-sc0000078-1491911889:540024..540146 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1491911889:538736..538800 | TCONS_00007625-exon-sc0000078-1491911889:538736..538800 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1491911889:538326..538421 | TCONS_00007625-exon-sc0000078-1491911889:538326..538421 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1491911889:537929..538019 | TCONS_00007625-exon-sc0000078-1491911889:537929..538019 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1491911889:537278..537361 | TCONS_00007625-exon-sc0000078-1491911889:537278..537361 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1491911889:536908..536940 | TCONS_00007625-exon-sc0000078-1491911889:536908..536940 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1491911889:530824..530898 | TCONS_00007625-exon-sc0000078-1491911889:530824..530898 | Clytia hemisphaerica | exon |
TCONS_00007625-exon-sc0000078-1491911889:530030..530257 | TCONS_00007625-exon-sc0000078-1491911889:530030..530257 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000078 | supercontig | sc0000078:530030..540146 - |
Blast
BLAST of TCONS_00007625 vs. Swiss-Prot (Human)
Match: PSF1 (DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.148e-82 Identity = 113/196 (57.65%), Postives = 149/196 (76.02%), Query Frame = 1
Query: 49 MFGEKAFELIKELKRSTDGNLPAFNEDLVRQVLDEMRVLFEENQKEVT-ASVEGEEGLYSGVQLRHESLERNKRCLLAYIYNRMMRIKQYRWDIGSVLPQDVKLNLVEQEVKWFTEYNKSLAKYMMSTAGGHGIDLTQNMTPPKSLYIEVRCLVDYGEFETEDGTVVILKKNSQHFLPTTQCEHLVRQGILEHILA 633
MF EKA ELI+EL R+ +G LPAFNED +RQVL+EM+ L+E+NQ +V A G L ++ RH SL RN+RC +AY+Y+R++RI+ RW+ GSVLP ++ ++ +E++WF Y +SLA YM S G G+D+TQ+M PPKSLYIEVRCL DYGEFE +DGT V+LKKNSQHFLP +CE L+RQG+LEHIL+
Sbjct: 1 MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSGGRSDLIPTIKFRHCSLLRNRRCTVAYLYDRLLRIRALRWEYGSVLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGEFEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHILS 196
The following BLAST results are available for this feature:
|